Name | A4JKDmX9Vo3n7Olcko1bjSoqABFKDmABFKDm7AsVDmu4OKDmyceFEo_0 |
Workunit | 2324600 |
Created | 11 Aug 2023, 1:29:56 UTC |
Sent | 11 Aug 2023, 1:33:40 UTC |
Report deadline | 18 Aug 2023, 1:33:40 UTC |
Received | 11 Aug 2023, 2:02:06 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 26 min 7 sec |
CPU time | 10 min 35 sec |
Validate state | Valid |
Credit | 18.78 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.51 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 91.08 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 02:34:48 (9051): wrapper (7.7.26015): starting 02:34:48 (9051): wrapper: running run_atlas (--nthreads 4) [2023-08-11 02:34:48] Arguments: --nthreads 4 [2023-08-11 02:34:48] Threads: 4 [2023-08-11 02:34:48] Checking for CVMFS [2023-08-11 02:34:50] Probing /cvmfs/atlas.cern.ch... OK [2023-08-11 02:34:56] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-11 02:34:56] Running cvmfs_config stat atlas.cern.ch [2023-08-11 02:34:57] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-11 02:34:57] 2.9.0.0 9195 0 24388 122320 3 1 3659708 4194304 0 130560 0 0 0.000 829 434 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-11 02:34:57] CVMFS is ok [2023-08-11 02:34:57] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-11 02:34:57] Checking for apptainer binary... [2023-08-11 02:34:57] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-11 02:34:57] Running /usr/bin/apptainer --version [2023-08-11 02:34:57] apptainer version 1.0.3 [2023-08-11 02:34:57] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-11 02:34:58] TeeC16 [2023-08-11 02:34:58] apptainer works [2023-08-11 02:34:58] Set ATHENA_PROC_NUMBER=4 [2023-08-11 02:34:58] Set ATHENA_CORE_NUMBER=4 [2023-08-11 02:34:58] Starting ATLAS job with PandaID=5928563108 [2023-08-11 02:34:58] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-11 03:00:53] *** The last 200 lines of the pilot log: *** [2023-08-11 03:00:53] Setting up [4mcpuflags 0.1.0[0m ... [2023-08-11 03:00:53] >>>>>>>>>>>>>>>>>>>>>>>>> Information for user <<<<<<<<<<<<<<<<<<<<<<<<< [2023-08-11 03:00:53] ************************************************************************ [2023-08-11 03:00:53] x86-64-v2 [2023-08-11 03:00:53] 2023-08-11 02:00:33,202 | INFO | pilot.user.atlas.utilities | get_cpu_arch | CPU arch script returned: x86-64-v2 [2023-08-11 03:00:53] 2023-08-11 02:00:33,202 | DEBUG | pilot.control.job | get_data_structure | cpu arch=x86-64-v2 [2023-08-11 03:00:53] 2023-08-11 02:00:33,202 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5928563108/memory_monitor_summary.json (trf name=prmon [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.0, 'nthreads': 5.933, 'pss': 1262650.0, 'rchar': 68356319.0, [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | .............................. [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | . get job = 68 s [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | . initial setup = 56 s [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | . payload setup = 45 s [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | . stage-in = 55 s [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | . payload execution = 896 s [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | . stage-out = 329 s [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | INFO | pilot.util.timing | timing_report | .............................. [2023-08-11 03:00:53] 2023-08-11 02:00:33,203 | DEBUG | pilot.control.job | send_state | data={'jobId': '5928563108', 'state': 'finished', 'timestamp': '2023-08-11T03:00:23+00:00', 'siteNam [2023-08-11 03:00:53] 2023-08-11 02:00:33,204 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5928563108', 'state': 'finished', 'timestamp': '2023-08-11T03:00:23 [2023-08-11 03:00:53] 2023-08-11 02:00:33,204 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /home/m/BOINC/slots/1/heartbeat.json [2023-08-11 03:00:53] 2023-08-11 02:00:33,204 | DEBUG | pilot.control.job | queue_monitor | job.completed=False [2023-08-11 03:00:53] 2023-08-11 02:00:33,262 | INFO | pilot.control.job | make_job_report | [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | job summary report [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | PanDA job id: 5928563108 [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 650 s [2023-08-11 03:00:53] 2023-08-11 02:00:33,263 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | pid: 20177 [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | pgrp: 20177 [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | corecount: 4 [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | event service: False [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | sizes: {0: 2460330, 1: 2461865, 12: 2462011, 22: 2462039, 33: 2462067, 43: 2462095, 54: 2462251, 60: [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.control.job | make_job_report | [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | DEBUG | pilot.control.job | has_job_completed | ls -lF /home/m/BOINC/slots/1: [2023-08-11 03:00:53] [2023-08-11 03:00:53] 2023-08-11 02:00:33,264 | INFO | pilot.util.container | print_executable | executing command: ls -lF /home/m/BOINC/slots/1 [2023-08-11 03:00:53] 2023-08-11 02:00:33,278 | DEBUG | pilot.control.job | has_job_completed | total 44556 [2023-08-11 03:00:53] -rw------- 1 m m 621385 Aug 11 03:00 363ddba2-867d-4991-96ba-38f28d633250_99746.1.job.log [2023-08-11 03:00:53] -rw------- 1 m m 181353 Aug 11 02:57 363ddba2-867d-4991-96ba-38f28d633250_99746.1.job.log.tgz [2023-08-11 03:00:53] -rw------- 1 m m 129 Aug 11 02:34 A4JKDmX9Vo3n7Olcko1bjSoqABFKDmABFKDm7AsVDmu4OKDmyceFEo.diag [2023-08-11 03:00:53] -rw-r--r-- 2 m m 38019645 Aug 11 02:34 EVNT.04972714._000023.pool.root.1 [2023-08-11 03:00:53] drwxrwx--- 2 m m 4096 Aug 11 03:00 PanDA_Pilot-5928563108/ [2023-08-11 03:00:53] -rw------- 1 m m 1018550 Aug 11 02:35 agis_schedconf.cvmfs.json [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 0 Aug 11 02:34 boinc_lockfile [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 8192 Aug 11 03:00 boinc_mmap_file [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 533 Aug 11 02:54 boinc_task_state.xml [2023-08-11 03:00:53] -rw------- 1 m m 1374166 Aug 11 02:36 cric_ddmendpoints.json [2023-08-11 03:00:53] -rw------- 1 m m 6656 Aug 11 03:00 heartbeat.json [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 5728 Aug 11 02:34 init_data.xml [2023-08-11 03:00:53] -rw-r--r-- 2 m m 927378 Aug 11 02:34 input.tar.gz [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 112 Aug 11 02:34 job.xml [2023-08-11 03:00:53] -rw------- 1 m m 1016 Aug 11 02:54 memory_monitor_summary.json [2023-08-11 03:00:53] -rw------- 1 m m 1769757 Aug 11 02:54 output.1.363ddba2-867d-4991-96ba-38f28d633250_99746.pool.root [2023-08-11 03:00:53] -rw------- 1 m m 464 Aug 11 03:00 output.list [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 2666 Aug 11 02:34 pandaJob.out [2023-08-11 03:00:53] drwx------ 5 m m 4096 Aug 11 02:37 pilot3/ [2023-08-11 03:00:53] -rw------- 1 m m 917980 Aug 11 02:29 pilot3.tar.gz [2023-08-11 03:00:53] -rw------- 1 m m 606226 Aug 11 03:00 pilotlog.txt [2023-08-11 03:00:53] -rw-r--r-- 1 m m 4388 Aug 11 02:29 queuedata.json [2023-08-11 03:00:53] -rwxr-xr-x 1 m m 7986 Aug 11 02:34 run_atlas* [2023-08-11 03:00:53] -rwx------ 1 m m 27275 Aug 11 02:29 runpilot2-wrapper.sh* [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 407 Aug 11 02:34 runtime_log [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 7699 Aug 11 02:34 runtime_log.err [2023-08-11 03:00:53] -rw------- 1 m m 424 Aug 11 02:34 setup.sh.local [2023-08-11 03:00:53] drwxrwx--x 2 m m 4096 Aug 11 02:34 shared/ [2023-08-11 03:00:53] -rw-r--r-- 2 m m 17632 Aug 11 02:34 start_atlas.sh [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 1715 Aug 11 02:34 stderr.txt [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 107 Aug 11 02:34 wrapper_26015_x86_64-pc-linux-gnu [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 25 Aug 11 03:00 wrapper_checkpoint.txt [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,279 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.control.job | has_job_completed | job 5928563108 has completed (purged errors) [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-08-11 03:00:53] 2023-08-11 02:00:33,280 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-08-11 03:00:53] 2023-08-11 02:00:33,282 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /home/m/BOINC/slots/1/PanDA_Pilot-5928563108 [2023-08-11 03:00:53] 2023-08-11 02:00:34,283 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [20177] [2023-08-11 03:00:53] 2023-08-11 02:00:34,284 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 20177 [2023-08-11 03:00:53] 2023-08-11 02:00:34,284 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-11 03:00:53] 2023-08-11 02:00:35,289 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-08-11 03:00:53] 2023-08-11 02:00:35,289 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=20177 [2023-08-11 03:00:53] 2023-08-11 02:00:35,325 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [20177] (in reverse order) [2023-08-11 03:00:53] 2023-08-11 02:00:35,355 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-08-11 03:00:53] 2023-08-11 02:00:35,355 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-08-11 03:00:53] 2023-08-11 02:00:35,355 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-08-11 03:00:53] 2023-08-11 02:00:35,355 | INFO | pilot.control.job | retrieve | ready for new job [2023-08-11 03:00:53] 2023-08-11 02:00:35,355 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-08-11 03:00:53] 2023-08-11 02:00:35,356 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-11 03:00:53] 2023-08-11 02:00:35,356 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.5.18 *** [2023-08-11 03:00:53] 2023-08-11 02:00:35,356 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-11 03:00:53] 2023-08-11 02:00:35,356 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-08-11 03:00:53] 2023-08-11 02:00:35,373 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-08-11 03:00:53] 2023-08-11 02:00:35,373 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-08-11 03:00:53] 2023-08-11 02:00:35,385 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-08-11 03:00:53] NAME="CentOS Linux" [2023-08-11 03:00:53] VERSION="7 (Core)" [2023-08-11 03:00:53] ID="centos" [2023-08-11 03:00:53] ID_LIKE="rhel fedora" [2023-08-11 03:00:53] VERSION_ID="7" [2023-08-11 03:00:53] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-11 03:00:53] ANSI_COLOR="0;31" [2023-08-11 03:00:53] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-11 03:00:53] HOME_URL="https://www.centos.org/" [2023-08-11 03:00:53] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-11 03:00:53] [2023-08-11 03:00:53] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-11 03:00:53] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-11 03:00:53] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-11 03:00:53] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-11 03:00:53] [2023-08-11 03:00:53] 2023-08-11 02:00:35,385 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-11 03:00:53] 2023-08-11 02:00:35,888 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /home/m/BOINC/slots/1 [2023-08-11 03:00:53] 2023-08-11 02:00:35,888 | INFO | pilot.util.container | print_executable | executing command: df -mP /home/m/BOINC/slots/1 [2023-08-11 03:00:53] 2023-08-11 02:00:35,900 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-08-11 03:00:53] /dev/sda1 455417 28752 403509 7% /home/m/BOINC/slots/1 [2023-08-11 03:00:53] 2023-08-11 02:00:35,900 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-08-11 03:00:53] 2023-08-11 02:00:35,900 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (423109853184 B) [2023-08-11 03:00:53] 2023-08-11 02:00:35,900 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-11 03:00:53] 2023-08-11 02:00:35,900 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-11 03:00:53] 2023-08-11 02:00:35,900 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-08-11 03:00:53] 2023-08-11 02:00:35,901 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-08-11 03:00:53] 2023-08-11 02:00:35,901 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues [2023-08-11 03:00:53] 2023-08-11 02:00:35,901 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set [2023-08-11 03:00:53] 2023-08-11 02:00:35,901 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish [2023-08-11 03:00:53] 2023-08-11 02:00:36,093 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-08-11 03:00:53] 2023-08-11 02:00:36,468 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration [2023-08-11 03:00:53] 2023-08-11 02:00:36,468 | INFO | pilot.control.job | job_monitor | aborting loop [2023-08-11 03:00:53] 2023-08-11 02:00:36,901 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:36,942 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:36,956 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-08-11 03:00:53] 2023-08-11 02:00:37,098 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,128 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-08-11 03:00:53] 2023-08-11 02:00:37,378 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,474 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,532 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,668 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,712 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,808 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,815 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-11 03:00:53] 2023-08-11 02:00:37,906 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:37,961 | INFO | pilot.control.data | control | [data] control thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:38,133 | INFO | pilot.control.job | control | [job] control thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:38,265 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:38,272 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-11 03:00:53] 2023-08-11 02:00:39,277 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:41,821 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:46,629 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-08-11 03:00:53] 2023-08-11 02:00:46,629 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-08-11 03:00:53] 2023-08-11 02:00:46,629 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-08-11 03:00:53] 2023-08-11 02:00:47,633 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-08-11 03:00:53] 2023-08-11 02:00:48,426 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140699 [2023-08-11 03:00:53] 2023-08-11 02:00:48,426 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted [2023-08-11 03:00:53] 2023-08-11 02:00:48,955 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring [2023-08-11 03:00:53] 2023-08-11 02:00:48,955 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-08-11 03:00:53] 2023-08-11 02:00:53,449 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-08-11 03:00:53] 2023-08-11 02:00:53,449 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-08-11 03:00:53] 2023-08-11 02:00:53,449 | DEBUG | root | <module> | trace=<class 'pilot.workflow.generic.traces'> [2023-08-11 03:00:53] 2023-08-11 02:00:53,449 | INFO | root | wrap_up | traces error code: 0 [2023-08-11 03:00:53] 2023-08-11 02:00:53,449 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-08-11 03:00:53] 2023-08-11 02:00:53,495 [wrapper] ==== pilot stdout END ==== [2023-08-11 03:00:53] 2023-08-11 02:00:53,499 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-11 03:00:53] 2023-08-11 02:00:53,502 [wrapper] pilotpid: 12730 [2023-08-11 03:00:53] 2023-08-11 02:00:53,505 [wrapper] Pilot exit status: 0 [2023-08-11 03:00:53] 2023-08-11 02:00:53,515 [wrapper] pandaids: 5928563108 [2023-08-11 03:00:53] 2023-08-11 02:00:53,521 [wrapper] apfmon messages muted [2023-08-11 03:00:53] 2023-08-11 02:00:53,524 [wrapper] Test setup, not cleaning [2023-08-11 03:00:53] 2023-08-11 02:00:53,528 [wrapper] ==== wrapper stdout END ==== [2023-08-11 03:00:53] 2023-08-11 02:00:53,531 [wrapper] ==== wrapper stderr END ==== [2023-08-11 03:00:53] 2023-08-11 02:00:53,538 [wrapper] wrapperexiting ec=0, duration=1554 [2023-08-11 03:00:53] 2023-08-11 02:00:53,541 [wrapper] apfmon messages muted [2023-08-11 03:00:53] *** Error codes and diagnostics *** [2023-08-11 03:00:53] "exeErrorCode": 0, [2023-08-11 03:00:53] "exeErrorDiag": "", [2023-08-11 03:00:53] "pilotErrorCode": 0, [2023-08-11 03:00:53] "pilotErrorDiag": "", [2023-08-11 03:00:53] *** Listing of results directory *** [2023-08-11 03:00:53] total 46564 [2023-08-11 03:00:53] -rwx------ 1 m m 27275 Aug 11 02:29 runpilot2-wrapper.sh [2023-08-11 03:00:53] -rw-r--r-- 1 m m 4388 Aug 11 02:29 queuedata.json [2023-08-11 03:00:53] -rw------- 1 m m 917980 Aug 11 02:29 pilot3.tar.gz [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 107 Aug 11 02:34 wrapper_26015_x86_64-pc-linux-gnu [2023-08-11 03:00:53] -rwxr-xr-x 1 m m 7986 Aug 11 02:34 run_atlas [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 112 Aug 11 02:34 job.xml [2023-08-11 03:00:53] -rw-r--r-- 2 m m 17632 Aug 11 02:34 start_atlas.sh [2023-08-11 03:00:53] drwxrwx--x 2 m m 4096 Aug 11 02:34 shared [2023-08-11 03:00:53] -rw-r--r-- 2 m m 927378 Aug 11 02:34 input.tar.gz [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 5728 Aug 11 02:34 init_data.xml [2023-08-11 03:00:53] -rw-r--r-- 2 m m 38019645 Aug 11 02:34 EVNT.04972714._000023.pool.root.1 [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 0 Aug 11 02:34 boinc_lockfile [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 2666 Aug 11 02:34 pandaJob.out [2023-08-11 03:00:53] -rw------- 1 m m 424 Aug 11 02:34 setup.sh.local [2023-08-11 03:00:53] -rw------- 1 m m 1018550 Aug 11 02:35 agis_schedconf.cvmfs.json [2023-08-11 03:00:53] -rw------- 1 m m 1374166 Aug 11 02:36 cric_ddmendpoints.json [2023-08-11 03:00:53] drwx------ 5 m m 4096 Aug 11 02:37 pilot3 [2023-08-11 03:00:53] -rw------- 1 m m 1769757 Aug 11 02:54 output.1.363ddba2-867d-4991-96ba-38f28d633250_99746.pool.root [2023-08-11 03:00:53] -rw------- 1 m m 1016 Aug 11 02:54 memory_monitor_summary.json [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 533 Aug 11 02:54 boinc_task_state.xml [2023-08-11 03:00:53] -rw------- 1 m m 181353 Aug 11 02:57 363ddba2-867d-4991-96ba-38f28d633250_99746.1.job.log.tgz [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 8192 Aug 11 03:00 boinc_mmap_file [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 25 Aug 11 03:00 wrapper_checkpoint.txt [2023-08-11 03:00:53] -rw------- 1 m m 6656 Aug 11 03:00 heartbeat.json [2023-08-11 03:00:53] -rw------- 1 m m 8547 Aug 11 03:00 pilotlog.txt [2023-08-11 03:00:53] -rw------- 1 m m 637663 Aug 11 03:00 363ddba2-867d-4991-96ba-38f28d633250_99746.1.job.log [2023-08-11 03:00:53] -rw------- 1 m m 464 Aug 11 03:00 output.list [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 748 Aug 11 03:00 runtime_log [2023-08-11 03:00:53] -rw------- 1 m m 2611200 Aug 11 03:00 result.tar.gz [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 11913 Aug 11 03:00 runtime_log.err [2023-08-11 03:00:53] -rw------- 1 m m 627 Aug 11 03:00 A4JKDmX9Vo3n7Olcko1bjSoqABFKDmABFKDm7AsVDmu4OKDmyceFEo.diag [2023-08-11 03:00:53] -rw-rw-r-- 1 m m 28731 Aug 11 03:00 stderr.txt [2023-08-11 03:00:53] HITS file was successfully produced: [2023-08-11 03:00:53] -rw------- 1 m m 1769757 Aug 11 02:54 shared/HITS.pool.root.1 [2023-08-11 03:00:53] *** Contents of shared directory: *** [2023-08-11 03:00:53] total 42344 [2023-08-11 03:00:53] -rw-r--r-- 2 m m 17632 Aug 11 02:34 start_atlas.sh [2023-08-11 03:00:53] -rw-r--r-- 2 m m 927378 Aug 11 02:34 input.tar.gz [2023-08-11 03:00:53] -rw-r--r-- 2 m m 38019645 Aug 11 02:34 ATLAS.root_0 [2023-08-11 03:00:53] -rw------- 1 m m 1769757 Aug 11 02:54 HITS.pool.root.1 [2023-08-11 03:00:53] -rw------- 1 m m 2611200 Aug 11 03:00 result.tar.gz 03:00:54 (9051): run_atlas exited; CPU time 635.150349 03:00:54 (9051): called boinc_finish(0) </stderr_txt> ]]>
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