Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
14:33:53 (18013): wrapper (7.7.26015): starting
14:33:53 (18013): wrapper: running run_atlas (--nthreads 1)
[2023-08-14 14:33:53] Arguments: --nthreads 1
[2023-08-14 14:33:53] Threads: 1
[2023-08-14 14:33:53] Checking for CVMFS
[2023-08-14 14:33:56] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-14 14:33:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-14 14:33:59] Running cvmfs_config stat atlas.cern.ch
[2023-08-14 14:33:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-14 14:33:59] 2.6.3.0 18178 0 22296 122446 3 1 1404254 2816000 0 65024 0 0 n/a 829 580 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-08-14 14:33:59] CVMFS is ok
[2023-08-14 14:33:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-14 14:33:59] Checking for apptainer binary...
[2023-08-14 14:33:59] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-08-14 14:33:59] apptainer is not installed, using version from CVMFS
[2023-08-14 14:33:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-14 14:34:16] HPi7COS7
[2023-08-14 14:34:16] apptainer works
[2023-08-14 14:34:16] Starting ATLAS job with PandaID=5931675841
[2023-08-14 14:34:16] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-14 15:25:20]  *** The last 200 lines of the pilot log: ***
[2023-08-14 15:25:20] 2023-08-14 13:24:25,536 | INFO     | checking for looping job (in state=stageout)
[2023-08-14 15:25:20] 2023-08-14 13:24:25,536 | INFO     | using looping job limit: 7200 s
[2023-08-14 15:25:20] 2023-08-14 13:24:25,594 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:25,594 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:28,113 | INFO     | monitor loop #336: job 0:5931675841 is in state 'stageout'
[2023-08-14 15:25:20] 2023-08-14 13:24:28,203 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:28,204 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:30,725 | INFO     | monitor loop #337: job 0:5931675841 is in state 'stageout'
[2023-08-14 15:25:20] 2023-08-14 13:24:30,856 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:30,856 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:33,388 | INFO     | monitor loop #338: job 0:5931675841 is in state 'stageout'
[2023-08-14 15:25:20] 2023-08-14 13:24:33,511 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:33,511 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:36,049 | INFO     | monitor loop #339: job 0:5931675841 is in state 'stageout'
[2023-08-14 15:25:20] 2023-08-14 13:24:36,165 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:36,165 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:38,686 | INFO     | monitor loop #340: job 0:5931675841 is in state 'stageout'
[2023-08-14 15:25:20] 2023-08-14 13:24:38,743 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:38,744 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:41,254 | INFO     | monitor loop #341: job 0:5931675841 is in state 'stageout'
[2023-08-14 15:25:20] 2023-08-14 13:24:41,313 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:41,313 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:43,825 | INFO     | monitor loop #342: job 0:5931675841 is in state 'stageout'
[2023-08-14 15:25:20] 2023-08-14 13:24:43,894 | INFO     | number of running child processes to parent process 29122: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:43,895 | INFO     | maximum number of monitored processes: 7
[2023-08-14 15:25:20] 2023-08-14 13:24:44,878 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-14 15:25:20] 2023-08-14 13:24:45,017 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-14 15:25:20] 2023-08-14 13:24:45,017 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2023-08-14 15:25:20] 2023-08-14 13:24:45,095 | INFO     | transferring file 32375134-232a-415c-afce-9e39b8c62621_33117.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-5931675841/32375134-232a-415c-afce-9e39b8c62621_
[2023-08-14 15:25:20] 2023-08-14 13:24:45,096 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-5931675841/32375134-232a-415c-afce-9e39b8c62621_33117.1.job.log.tgz /var/lib/boinc/slots/0/32
[2023-08-14 15:25:20] 2023-08-14 13:24:45,119 | INFO     | Adding to output.list: 32375134-232a-415c-afce-9e39b8c62621_33117.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/7c/90/32375134-232a-
[2023-08-14 15:25:20] 2023-08-14 13:24:45,120 | INFO     | summary of transferred files:
[2023-08-14 15:25:20] 2023-08-14 13:24:45,120 | INFO     |  -- lfn=32375134-232a-415c-afce-9e39b8c62621_33117.1.job.log.tgz, status_code=0, status=transferred
[2023-08-14 15:25:20] 2023-08-14 13:24:45,120 | INFO     | stage-out finished correctly
[2023-08-14 15:25:20] 2023-08-14 13:24:45,821 | INFO     | 2998s have passed since pilot start
[2023-08-14 15:25:20] 2023-08-14 13:24:46,253 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-14 15:25:20] 2023-08-14 13:24:46,423 | INFO     | monitor loop #343: job 0:5931675841 is in state 'finished'
[2023-08-14 15:25:20] 2023-08-14 13:24:46,425 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-14 15:25:20] 2023-08-14 13:24:48,077 | INFO     | job 5931675841 has state=finished
[2023-08-14 15:25:20] 2023-08-14 13:24:48,077 | INFO     | preparing for final server update for job 5931675841 in state='finished'
[2023-08-14 15:25:20] 2023-08-14 13:24:48,078 | INFO     | this job has now completed (state=finished)
[2023-08-14 15:25:20] 2023-08-14 13:24:48,078 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-14 15:25:20] 2023-08-14 13:24:48,078 | INFO     | job 5931675841 has finished - writing final server update
[2023-08-14 15:25:20] 2023-08-14 13:24:48,079 | INFO     | fitting pss+swap vs Time
[2023-08-14 15:25:20] 2023-08-14 13:24:48,080 | INFO     | current memory leak: 633.11 B/s (using 31 data points, chi2=1.40)
[2023-08-14 15:25:20] 2023-08-14 13:24:48,080 | INFO     | total number of processed events: 2 (read)
[2023-08-14 15:25:20] 2023-08-14 13:24:48,093 | INFO     | executing command: lscpu
[2023-08-14 15:25:20] 2023-08-14 13:24:48,108 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-08-14 15:25:20] 2023-08-14 13:24:48,108 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-14 15:25:20] 2023-08-14 13:24:48,129 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-14 15:25:20] 2023-08-14 13:24:48,942 | INFO     | monitor loop #344: job 0:5931675841 is in state 'finished'
[2023-08-14 15:25:20] 2023-08-14 13:24:48,942 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-14 15:25:20] 2023-08-14 13:24:51,467 | INFO     | monitor loop #345: job 0:5931675841 is in state 'finished'
[2023-08-14 15:25:20] 2023-08-14 13:24:51,468 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-14 15:25:20] 2023-08-14 13:24:53,984 | INFO     | monitor loop #346: job 0:5931675841 is in state 'finished'
[2023-08-14 15:25:20] 2023-08-14 13:24:53,985 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-14 15:25:20] 2023-08-14 13:24:56,502 | INFO     | monitor loop #347: job 0:5931675841 is in state 'finished'
[2023-08-14 15:25:20] 2023-08-14 13:24:56,502 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-14 15:25:20] 2023-08-14 13:24:58,656 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-14 15:25:20] 2023-08-14 13:24:58,657 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5931675841/memory_monitor_summary.json (trf name=prmon)
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | extracted standard info from prmon json
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | extracted standard memory fields from prmon json
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | ..............................
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | . Timing measurements:
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | . get job = 71 s
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | . initial setup = 65 s
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | . payload setup = 40 s
[2023-08-14 15:25:20] 2023-08-14 13:24:58,658 | INFO     | . stage-in = 49 s
[2023-08-14 15:25:20] 2023-08-14 13:24:58,659 | INFO     | . payload execution = 2320 s
[2023-08-14 15:25:20] 2023-08-14 13:24:58,659 | INFO     | . stage-out = 423 s
[2023-08-14 15:25:20] 2023-08-14 13:24:58,659 | INFO     | ..............................
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | 
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | job summary report
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | --------------------------------------------------
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | PanDA job id: 5931675841
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | task id: NULL
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | errors: (none)
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | pilot state: finished 
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | transexitcode: 0
[2023-08-14 15:25:20] 2023-08-14 13:24:58,788 | INFO     | exeerrorcode: 0
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | exeerrordiag: 
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | exitcode: 0
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | exitmsg: OK
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | cpuconsumptiontime: 1401 s
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | nevents: 2
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | neventsw: 0
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | pid: 29122
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | pgrp: 29122
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | corecount: 1
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | event service: False
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | sizes: {0: 2482649, 1: 2483250, 2: 2484213, 3: 2484213, 13: 2484387, 24: 2484443, 35: 2484599, 45: 2484627, 56: 2484655, 58: 2484743, 67: 2484771, 2363: 2506798, 2
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | --------------------------------------------------
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | 
[2023-08-14 15:25:20] 2023-08-14 13:24:58,789 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,814 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,815 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-14 15:25:20] 2023-08-14 13:24:58,816 | INFO     | job 5931675841 has completed (purged errors)
[2023-08-14 15:25:20] 2023-08-14 13:24:58,816 | INFO     | overall cleanup function is called
[2023-08-14 15:25:20] 2023-08-14 13:24:59,835 | INFO     | --- collectZombieJob: --- 10, [29122]
[2023-08-14 15:25:20] 2023-08-14 13:24:59,835 | INFO     | zombie collector trying to kill pid 29122
[2023-08-14 15:25:20] 2023-08-14 13:24:59,835 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-14 15:25:20] 2023-08-14 13:25:00,846 | INFO     | collected zombie processes
[2023-08-14 15:25:20] 2023-08-14 13:25:00,847 | INFO     | will now attempt to kill all subprocesses of pid=29122
[2023-08-14 15:25:20] 2023-08-14 13:25:00,938 | INFO     | process IDs to be killed: [29122] (in reverse order)
[2023-08-14 15:25:20] 2023-08-14 13:25:00,987 | WARNING  | found no corresponding commands to process id(s)
[2023-08-14 15:25:20] 2023-08-14 13:25:00,988 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-14 15:25:20] 2023-08-14 13:25:00,988 | INFO     | ready for new job
[2023-08-14 15:25:20] 2023-08-14 13:25:00,988 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-14 15:25:20] 2023-08-14 13:25:00,990 | INFO     | *************************************
[2023-08-14 15:25:20] 2023-08-14 13:25:00,990 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-14 15:25:20] 2023-08-14 13:25:00,991 | INFO     | *************************************
[2023-08-14 15:25:20] 2023-08-14 13:25:00,991 | INFO     | 
[2023-08-14 15:25:20] 2023-08-14 13:25:00,991 | INFO     | pilot is running in a VM
[2023-08-14 15:25:20] 2023-08-14 13:25:00,991 | INFO     | architecture information:
[2023-08-14 15:25:20] 2023-08-14 13:25:00,992 | INFO     | executing command: cat /etc/os-release
[2023-08-14 15:25:20] 2023-08-14 13:25:01,008 | INFO     | cat /etc/os-release:
[2023-08-14 15:25:20] NAME="CentOS Linux"
[2023-08-14 15:25:20] VERSION="7 (Core)"
[2023-08-14 15:25:20] ID="centos"
[2023-08-14 15:25:20] ID_LIKE="rhel fedora"
[2023-08-14 15:25:20] VERSION_ID="7"
[2023-08-14 15:25:20] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-14 15:25:20] ANSI_COLOR="0;31"
[2023-08-14 15:25:20] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-14 15:25:20] HOME_URL="https://www.centos.org/"
[2023-08-14 15:25:20] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-14 15:25:20] 
[2023-08-14 15:25:20] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-14 15:25:20] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-14 15:25:20] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-14 15:25:20] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-14 15:25:20] 
[2023-08-14 15:25:20] 2023-08-14 13:25:01,009 | INFO     | *************************************
[2023-08-14 15:25:20] 2023-08-14 13:25:01,512 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-08-14 15:25:20] 2023-08-14 13:25:01,527 | INFO     | sufficient remaining disk space (11186208768 B)
[2023-08-14 15:25:20] 2023-08-14 13:25:01,527 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-14 15:25:20] 2023-08-14 13:25:01,527 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-14 15:25:20] 2023-08-14 13:25:01,527 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-14 15:25:20] 2023-08-14 13:25:01,527 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-08-14 15:25:20] 2023-08-14 13:25:01,527 | INFO     | found 0 job(s) in 20 queues
[2023-08-14 15:25:20] 2023-08-14 13:25:01,527 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-14 15:25:20] 2023-08-14 13:25:01,528 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-14 15:25:20] 2023-08-14 13:25:01,528 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-14 15:25:20] 2023-08-14 13:25:01,546 | WARNING  | job monitor detected an abort_job request (signal=None)
[2023-08-14 15:25:20] 2023-08-14 13:25:01,546 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-14 15:25:20] 2023-08-14 13:25:01,547 | INFO     | will abort loop
[2023-08-14 15:25:20] 2023-08-14 13:25:02,557 | INFO     | [job] retrieve thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:02,558 | INFO     | [job] validate thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:02,559 | INFO     | [job] job monitor thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:02,559 | INFO     | [data] copytool_in thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:02,671 | INFO     | [payload] control thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:02,686 | INFO     | [payload] failed_post thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:02,972 | INFO     | [data] control thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:03,065 | INFO     | [job] create_data_payload thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:03,312 | INFO     | [payload] validate_pre thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:03,539 | INFO     | [data] copytool_out thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:03,799 | INFO     | [payload] execute_payloads thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:03,831 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-14 15:25:20] 2023-08-14 13:25:04,023 | INFO     | [payload] validate_post thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:04,225 | INFO     | [job] control thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:04,840 | INFO     | [job] queue monitor thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:05,544 | INFO     | [data] queue_monitor thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:12,003 | INFO     | job.realtimelogging is not enabled
[2023-08-14 15:25:20] 2023-08-14 13:25:13,014 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-14 15:25:20] 2023-08-14 13:25:14,419 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139758938666816)>', '<ExcThread(monitor, started 139758663608064)>']
[2023-08-14 15:25:20] 2023-08-14 13:25:14,666 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-14 15:25:20] 2023-08-14 13:25:14,667 | INFO     | [monitor] control thread has ended
[2023-08-14 15:25:20] 2023-08-14 13:25:19,444 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-14 15:25:20] 2023-08-14 13:25:19,445 | INFO     | traces error code: 0
[2023-08-14 15:25:20] 2023-08-14 13:25:19,445 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-14 15:25:20] 2023-08-14 13:25:19,543 [wrapper] ==== pilot stdout END ====
[2023-08-14 15:25:20] 2023-08-14 13:25:19,547 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-14 15:25:20] 2023-08-14 13:25:19,550 [wrapper] pilotpid: 21692
[2023-08-14 15:25:20] 2023-08-14 13:25:19,554 [wrapper] Pilot exit status: 0
[2023-08-14 15:25:20] 2023-08-14 13:25:19,586 [wrapper] pandaids: 5931675841
[2023-08-14 15:25:20] 2023-08-14 13:25:19,634 [wrapper] apfmon messages muted
[2023-08-14 15:25:20] 2023-08-14 13:25:19,638 [wrapper] Test setup, not cleaning
[2023-08-14 15:25:20] 2023-08-14 13:25:19,643 [wrapper] ==== wrapper stdout END ====
[2023-08-14 15:25:20] 2023-08-14 13:25:19,647 [wrapper] ==== wrapper stderr END ====
[2023-08-14 15:25:20] 2023-08-14 13:25:19,656 [wrapper] wrapperexiting ec=0, duration=3063
[2023-08-14 15:25:20] 2023-08-14 13:25:19,675 [wrapper] apfmon messages muted
[2023-08-14 15:25:20]  *** Error codes and diagnostics ***
[2023-08-14 15:25:20]     "exeErrorCode": 0,
[2023-08-14 15:25:20]     "exeErrorDiag": "",
[2023-08-14 15:25:20]     "pilotErrorCode": 0,
[2023-08-14 15:25:20]     "pilotErrorDiag": "",
[2023-08-14 15:25:20]  *** Listing of results directory ***
[2023-08-14 15:25:20] insgesamt 46872
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc     4388 14. Aug 14:27 queuedata.json
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc   418016 14. Aug 14:27 pilot3.tar.gz
[2023-08-14 15:25:20] -rwx------. 1 boinc boinc    27277 14. Aug 14:28 runpilot2-wrapper.sh
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc      107 14. Aug 14:33 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-14 15:25:20] -rwxr-xr-x. 1 boinc boinc     7986 14. Aug 14:33 run_atlas
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc      112 14. Aug 14:33 job.xml
[2023-08-14 15:25:20] -rw-r--r--. 2 boinc boinc    17604 14. Aug 14:33 start_atlas.sh
[2023-08-14 15:25:20] drwxrwx--x. 2 boinc boinc       68 14. Aug 14:33 shared
[2023-08-14 15:25:20] -rw-r--r--. 2 boinc boinc   428869 14. Aug 14:33 input.tar.gz
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc     6069 14. Aug 14:33 init_data.xml
[2023-08-14 15:25:20] -rw-r--r--. 2 boinc boinc 38217911 14. Aug 14:33 EVNT.04972714._000030.pool.root.1
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc        0 14. Aug 14:33 boinc_lockfile
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc     2754 14. Aug 14:34 pandaJob.out
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc      461 14. Aug 14:34 setup.sh.local
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc  1386440 14. Aug 14:35 cric_ddmendpoints.json
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc  1015997 14. Aug 14:35 agis_schedconf.cvmfs.json
[2023-08-14 15:25:20] drwx------. 4 boinc boinc     4096 14. Aug 14:37 pilot3
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc  2662081 14. Aug 15:17 output.1.32375134-232a-415c-afce-9e39b8c62621_33117.pool.root
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc      534 14. Aug 15:17 boinc_task_state.xml
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc     1026 14. Aug 15:17 memory_monitor_summary.json
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc   172904 14. Aug 15:20 32375134-232a-415c-afce-9e39b8c62621_33117.1.job.log.tgz
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc     7421 14. Aug 15:24 heartbeat.json
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc       26 14. Aug 15:25 wrapper_checkpoint.txt
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc     8192 14. Aug 15:25 boinc_mmap_file
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc     4249 14. Aug 15:25 pilotlog.txt
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc   323050 14. Aug 15:25 32375134-232a-415c-afce-9e39b8c62621_33117.1.job.log
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc      464 14. Aug 15:25 output.list
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc      748 14. Aug 15:25 runtime_log
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc  3174400 14. Aug 15:25 result.tar.gz
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc    12191 14. Aug 15:25 runtime_log.err
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc      636 14. Aug 15:25 0VFODm7qlp3n7Olcko1bjSoqABFKDmABFKDm7AsVDmZFPKDm6N4uNm.diag
[2023-08-14 15:25:20] -rw-r--r--. 1 boinc boinc    22465 14. Aug 15:25 stderr.txt
[2023-08-14 15:25:20] HITS file was successfully produced:
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc 2662081 14. Aug 15:17 shared/HITS.pool.root.1
[2023-08-14 15:25:20]  *** Contents of shared directory: ***
[2023-08-14 15:25:20] insgesamt 43464
[2023-08-14 15:25:20] -rw-r--r--. 2 boinc boinc    17604 14. Aug 14:33 start_atlas.sh
[2023-08-14 15:25:20] -rw-r--r--. 2 boinc boinc   428869 14. Aug 14:33 input.tar.gz
[2023-08-14 15:25:20] -rw-r--r--. 2 boinc boinc 38217911 14. Aug 14:33 ATLAS.root_0
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc  2662081 14. Aug 15:17 HITS.pool.root.1
[2023-08-14 15:25:20] -rw-------. 1 boinc boinc  3174400 14. Aug 15:25 result.tar.gz
15:25:22 (18013): run_atlas exited; CPU time 1323.884434
15:25:22 (18013): called boinc_finish(0)

</stderr_txt>
]]>

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