Name EMcNDmuTzp3n7Olcko1bjSoqABFKDmABFKDm7AsVDmxHPKDmilMEhn_0
Workunit 2325321
Created 15 Aug 2023, 3:01:04 UTC
Sent 15 Aug 2023, 3:03:23 UTC
Report deadline 22 Aug 2023, 3:03:23 UTC
Received 15 Aug 2023, 3:34:26 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 28 min 33 sec
CPU time 11 min 19 sec
Validate state Valid
Credit 20.57
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.51 GB
Peak swap size 4.81 GB
Peak disk usage 92.97 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
04:04:32 (6241): wrapper (7.7.26015): starting
04:04:32 (6241): wrapper: running run_atlas (--nthreads 4)
[2023-08-15 04:04:32] Arguments: --nthreads 4
[2023-08-15 04:04:32] Threads: 4
[2023-08-15 04:04:32] Checking for CVMFS
[2023-08-15 04:04:35] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-15 04:04:41] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-15 04:04:41] Running cvmfs_config stat atlas.cern.ch
[2023-08-15 04:04:41] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-15 04:04:41] 2.9.0.0 6385 0 24576 122467 3 1 3119102 4194304 0 130560 0 0 0.000 829 264 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-08-15 04:04:41] CVMFS is ok
[2023-08-15 04:04:41] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-15 04:04:41] Checking for apptainer binary...
[2023-08-15 04:04:41] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-15 04:04:41] Running /usr/bin/apptainer --version
[2023-08-15 04:04:42] apptainer version 1.0.3
[2023-08-15 04:04:42] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-15 04:04:54] TeeC16
[2023-08-15 04:04:54] apptainer works
[2023-08-15 04:04:54] Set ATHENA_PROC_NUMBER=4
[2023-08-15 04:04:54] Set ATHENA_CORE_NUMBER=4
[2023-08-15 04:04:54] Starting ATLAS job with PandaID=5932295175
[2023-08-15 04:04:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-15 04:33:02]  *** The last 200 lines of the pilot log: ***
[2023-08-15 04:33:02]  Setting up cpuflags 0.1.0 ... 
[2023-08-15 04:33:02] >>>>>>>>>>>>>>>>>>>>>>>>> Information for user <<<<<<<<<<<<<<<<<<<<<<<<<
[2023-08-15 04:33:02] ************************************************************************
[2023-08-15 04:33:02] x86-64-v2
[2023-08-15 04:33:02] 2023-08-15 03:32:41,017 | INFO     | pilot.user.atlas.utilities       | get_cpu_arch              | CPU arch script returned: x86-64-v2
[2023-08-15 04:33:02] 2023-08-15 03:32:41,017 | DEBUG    | pilot.control.job                | get_data_structure        | cpu arch=x86-64-v2
[2023-08-15 04:33:02] 2023-08-15 03:32:41,017 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /home/m/BOINC/slots/2/PanDA_Pilot-5932295175/memory_monitor_summary.json (trf name=prmon
[2023-08-15 04:33:02] 2023-08-15 03:32:41,018 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 4.799, 'nthreads': 5.666, 'pss': 1271077.0, 'rchar': 68472102.
[2023-08-15 04:33:02] 2023-08-15 03:32:41,018 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2023-08-15 04:33:02] 2023-08-15 03:32:41,018 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | . get job = 50 s
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 62 s
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 12 s
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 54 s
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 905 s
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 412 s
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-08-15 04:33:02] 2023-08-15 03:32:41,019 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5932295175', 'state': 'finished', 'timestamp': '2023-08-15T04:32:31+00:00', 'siteNam
[2023-08-15 04:33:02] 2023-08-15 03:32:41,020 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5932295175', 'state': 'finished', 'timestamp': '2023-08-15T04:32:31
[2023-08-15 04:33:02] 2023-08-15 03:32:41,020 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /home/m/BOINC/slots/2/heartbeat.json
[2023-08-15 04:33:02] 2023-08-15 03:32:41,020 | DEBUG    | pilot.control.job                | queue_monitor             | job.completed=False
[2023-08-15 04:33:02] 2023-08-15 03:32:41,508 | INFO     | pilot.control.job                | make_job_report           | 
[2023-08-15 04:33:02] 2023-08-15 03:32:41,508 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-08-15 04:33:02] 2023-08-15 03:32:41,508 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-08-15 04:33:02] 2023-08-15 03:32:41,508 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5932295175
[2023-08-15 04:33:02] 2023-08-15 03:32:41,508 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-08-15 04:33:02] 2023-08-15 03:32:41,508 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-08-15 04:33:02] 2023-08-15 03:32:41,508 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 693 s
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-08-15 04:33:02] 2023-08-15 03:32:41,509 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.control.job                | make_job_report           | pid: 17427
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.control.job                | make_job_report           | pgrp: 17427
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.control.job                | make_job_report           | corecount: 4
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2483785, 1: 2483984, 11: 2484130, 22: 2484158, 33: 2484186, 43: 2484214, 54: 2484370, 59:
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.control.job                | make_job_report           | 
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /home/m/BOINC/slots/2:
[2023-08-15 04:33:02] 
[2023-08-15 04:33:02] 2023-08-15 03:32:41,510 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /home/m/BOINC/slots/2
[2023-08-15 04:33:02] 2023-08-15 03:32:41,527 | DEBUG    | pilot.control.job                | has_job_completed         | total 45568
[2023-08-15 04:33:02] -rw------- 1 m m      129 Aug 15 04:04 EMcNDmuTzp3n7Olcko1bjSoqABFKDmABFKDm7AsVDmxHPKDmilMEhn.diag
[2023-08-15 04:33:02] -rw-r--r-- 2 m m 38971704 Aug 15 04:04 EVNT.04972714._000035.pool.root.1
[2023-08-15 04:33:02] drwxrwx--- 2 m m     4096 Aug 15 04:32 PanDA_Pilot-5932295175/
[2023-08-15 04:33:02] -rw------- 1 m m  1015234 Aug 15 04:08 agis_schedconf.cvmfs.json
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m        0 Aug 15 04:04 boinc_lockfile
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     8192 Aug 15 04:32 boinc_mmap_file
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      533 Aug 15 04:25 boinc_task_state.xml
[2023-08-15 04:33:02] -rw------- 1 m m  1386440 Aug 15 04:08 cric_ddmendpoints.json
[2023-08-15 04:33:02] -rw------- 1 m m   659458 Aug 15 04:32 fc4bd8e6-26dd-412a-ad28-e94b01b55e4e_25155.1.job.log
[2023-08-15 04:33:02] -rw------- 1 m m   182837 Aug 15 04:28 fc4bd8e6-26dd-412a-ad28-e94b01b55e4e_25155.1.job.log.tgz
[2023-08-15 04:33:02] -rw------- 1 m m     7383 Aug 15 04:32 heartbeat.json
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     5728 Aug 15 04:04 init_data.xml
[2023-08-15 04:33:02] -rw-r--r-- 2 m m   927522 Aug 15 04:04 input.tar.gz
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      112 Aug 15 04:04 job.xml
[2023-08-15 04:33:02] -rw------- 1 m m     1017 Aug 15 04:25 memory_monitor_summary.json
[2023-08-15 04:33:02] -rw------- 1 m m  1776865 Aug 15 04:25 output.1.fc4bd8e6-26dd-412a-ad28-e94b01b55e4e_25155.pool.root
[2023-08-15 04:33:02] -rw------- 1 m m      464 Aug 15 04:32 output.list
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     2657 Aug 15 04:04 pandaJob.out
[2023-08-15 04:33:02] drwx------ 5 m m     4096 Aug 15 04:09 pilot3/
[2023-08-15 04:33:02] -rw------- 1 m m   918320 Aug 15 04:00 pilot3.tar.gz
[2023-08-15 04:33:02] -rw------- 1 m m   644213 Aug 15 04:32 pilotlog.txt
[2023-08-15 04:33:02] -rw-r--r-- 1 m m     4388 Aug 15 04:00 queuedata.json
[2023-08-15 04:33:02] -rwxr-xr-x 1 m m     7986 Aug 15 04:04 run_atlas*
[2023-08-15 04:33:02] -rwx------ 1 m m    27275 Aug 15 04:00 runpilot2-wrapper.sh*
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      407 Aug 15 04:04 runtime_log
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     7699 Aug 15 04:05 runtime_log.err
[2023-08-15 04:33:02] -rw------- 1 m m      424 Aug 15 04:04 setup.sh.local
[2023-08-15 04:33:02] drwxrwx--x 2 m m     4096 Aug 15 04:04 shared/
[2023-08-15 04:33:02] -rw-r--r-- 2 m m    17632 Aug 15 04:04 start_atlas.sh
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     1715 Aug 15 04:04 stderr.txt
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      107 Aug 15 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m       25 Aug 15 04:32 wrapper_checkpoint.txt
[2023-08-15 04:33:02] 2023-08-15 03:32:41,527 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,527 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,527 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,527 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,527 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,528 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | INFO     | pilot.control.job                | has_job_completed         | job 5932295175 has completed (purged errors)
[2023-08-15 04:33:02] 2023-08-15 03:32:41,529 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-08-15 04:33:02] 2023-08-15 03:32:41,530 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-08-15 04:33:02] 2023-08-15 03:32:41,531 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /home/m/BOINC/slots/2/PanDA_Pilot-5932295175
[2023-08-15 04:33:02] 2023-08-15 03:32:42,534 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [17427]
[2023-08-15 04:33:02] 2023-08-15 03:32:42,534 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 17427
[2023-08-15 04:33:02] 2023-08-15 03:32:42,534 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-15 04:33:02] 2023-08-15 03:32:43,539 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-08-15 04:33:02] 2023-08-15 03:32:43,539 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=17427
[2023-08-15 04:33:02] 2023-08-15 03:32:43,591 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [17427] (in reverse order)
[2023-08-15 04:33:02] 2023-08-15 03:32:43,620 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-08-15 04:33:02] 2023-08-15 03:32:43,621 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-08-15 04:33:02] 2023-08-15 03:32:43,621 | WARNING  | pilot.util.processes             | kill_processes            | exception caught: [Errno 22] Invalid argument: '/proc/1/cmdline'
[2023-08-15 04:33:02] 2023-08-15 03:32:43,621 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-08-15 04:33:02] 2023-08-15 03:32:43,621 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-08-15 04:33:02] 2023-08-15 03:32:43,621 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-08-15 04:33:02] 2023-08-15 03:32:43,622 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-08-15 04:33:02] 2023-08-15 03:32:43,622 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.6.5.19  ***
[2023-08-15 04:33:02] 2023-08-15 03:32:43,622 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-08-15 04:33:02] 2023-08-15 03:32:43,622 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-08-15 04:33:02] 2023-08-15 03:32:43,641 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-08-15 04:33:02] 2023-08-15 03:32:43,642 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2023-08-15 04:33:02] 2023-08-15 03:32:43,654 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2023-08-15 04:33:02] NAME="CentOS Linux"
[2023-08-15 04:33:02] VERSION="7 (Core)"
[2023-08-15 04:33:02] ID="centos"
[2023-08-15 04:33:02] ID_LIKE="rhel fedora"
[2023-08-15 04:33:02] VERSION_ID="7"
[2023-08-15 04:33:02] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-15 04:33:02] ANSI_COLOR="0;31"
[2023-08-15 04:33:02] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-15 04:33:02] HOME_URL="https://www.centos.org/"
[2023-08-15 04:33:02] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-15 04:33:02] 
[2023-08-15 04:33:02] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-15 04:33:02] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-15 04:33:02] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-15 04:33:02] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-15 04:33:02] 
[2023-08-15 04:33:02] 2023-08-15 03:32:43,654 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-08-15 04:33:02] 2023-08-15 03:32:44,157 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /home/m/BOINC/slots/2
[2023-08-15 04:33:02] 2023-08-15 03:32:44,157 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /home/m/BOINC/slots/2
[2023-08-15 04:33:02] 2023-08-15 03:32:44,170 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2023-08-15 04:33:02] /dev/sda1              455417 28189    404072       7% /home/m/BOINC/slots/2
[2023-08-15 04:33:02] 2023-08-15 03:32:44,170 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-08-15 04:33:02] 2023-08-15 03:32:44,170 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (423700201472 B)
[2023-08-15 04:33:02] 2023-08-15 03:32:44,170 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-15 04:33:02] 2023-08-15 03:32:44,170 | WARNING  | pilot.control.job                | retrieve                  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-15 04:33:02] 2023-08-15 03:32:44,170 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-15 04:33:02] 2023-08-15 03:32:44,398 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-08-15 04:33:02] 2023-08-15 03:32:44,472 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-15 04:33:02] 2023-08-15 03:32:44,472 | INFO     | pilot.control.job                | job_monitor               | aborting loop
[2023-08-15 04:33:02] 2023-08-15 03:32:44,473 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-08-15 04:33:02] 2023-08-15 03:32:44,773 | INFO     | pilot.util.queuehandling         | abort_jobs_in_queues      | found 0 job(s) in 20 queues
[2023-08-15 04:33:02] 2023-08-15 03:32:44,773 | WARNING  | pilot.control.monitor            | run_checks                | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-15 04:33:02] 2023-08-15 03:32:44,773 | WARNING  | pilot.control.monitor            | run_checks                | will wait for a maximum of 300 s for threads to finish
[2023-08-15 04:33:02] 2023-08-15 03:32:45,176 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,290 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,403 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,477 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,478 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,658 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,871 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-08-15 04:33:02] 2023-08-15 03:32:45,913 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,917 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,932 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,945 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:45,998 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:46,090 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-15 04:33:02] 2023-08-15 03:32:46,176 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:46,213 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-15 04:33:02] 2023-08-15 03:32:46,877 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:47,096 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:50,219 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:54,963 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-08-15 04:33:02] 2023-08-15 03:32:54,963 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-08-15 04:33:02] 2023-08-15 03:32:54,963 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-08-15 04:33:02] 2023-08-15 03:32:55,968 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-08-15 04:33:02] 2023-08-15 03:32:56,780 | INFO     | pilot.util.processes             | threads_aborted           | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139755
[2023-08-15 04:33:02] 2023-08-15 03:32:56,780 | DEBUG    | pilot.workflow.generic           | run                       | will proceed to set job_aborted
[2023-08-15 04:33:02] 2023-08-15 03:32:56,831 | WARNING  | pilot.control.monitor            | run_checks                | job_aborted has been set - aborting pilot monitoring
[2023-08-15 04:33:02] 2023-08-15 03:32:56,832 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-08-15 04:33:02] 2023-08-15 03:33:01,805 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-08-15 04:33:02] 2023-08-15 03:33:01,805 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-08-15 04:33:02] 2023-08-15 03:33:01,805 | DEBUG    | root                             | <module>                  | trace=<class 'pilot.workflow.generic.traces'>
[2023-08-15 04:33:02] 2023-08-15 03:33:01,805 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-08-15 04:33:02] 2023-08-15 03:33:01,806 | INFO     | root                             | wrap_up                   | pilot has finished (exit code=0, shell exit code=0)
[2023-08-15 04:33:02] 2023-08-15 03:33:01,866 [wrapper] ==== pilot stdout END ====
[2023-08-15 04:33:02] 2023-08-15 03:33:01,871 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-15 04:33:02] 2023-08-15 03:33:01,875 [wrapper] pilotpid: 10018
[2023-08-15 04:33:02] 2023-08-15 03:33:01,878 [wrapper] Pilot exit status: 0
[2023-08-15 04:33:02] 2023-08-15 03:33:01,891 [wrapper] pandaids: 5932295175
[2023-08-15 04:33:02] 2023-08-15 03:33:01,898 [wrapper] apfmon messages muted
[2023-08-15 04:33:02] 2023-08-15 03:33:01,901 [wrapper] Test setup, not cleaning
[2023-08-15 04:33:02] 2023-08-15 03:33:01,905 [wrapper] ==== wrapper stdout END ====
[2023-08-15 04:33:02] 2023-08-15 03:33:01,908 [wrapper] ==== wrapper stderr END ====
[2023-08-15 04:33:02] 2023-08-15 03:33:01,915 [wrapper] wrapperexiting ec=0, duration=1680
[2023-08-15 04:33:02] 2023-08-15 03:33:01,918 [wrapper] apfmon messages muted
[2023-08-15 04:33:02]  *** Error codes and diagnostics ***
[2023-08-15 04:33:02]     "exeErrorCode": 0,
[2023-08-15 04:33:02]     "exeErrorDiag": "",
[2023-08-15 04:33:02]     "pilotErrorCode": 0,
[2023-08-15 04:33:02]     "pilotErrorDiag": "",
[2023-08-15 04:33:02]  *** Listing of results directory ***
[2023-08-15 04:33:02] total 47580
[2023-08-15 04:33:02] -rwx------ 1 m m    27275 Aug 15 04:00 runpilot2-wrapper.sh
[2023-08-15 04:33:02] -rw-r--r-- 1 m m     4388 Aug 15 04:00 queuedata.json
[2023-08-15 04:33:02] -rw------- 1 m m   918320 Aug 15 04:00 pilot3.tar.gz
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      107 Aug 15 04:04 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-15 04:33:02] -rwxr-xr-x 1 m m     7986 Aug 15 04:04 run_atlas
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      112 Aug 15 04:04 job.xml
[2023-08-15 04:33:02] -rw-r--r-- 2 m m    17632 Aug 15 04:04 start_atlas.sh
[2023-08-15 04:33:02] drwxrwx--x 2 m m     4096 Aug 15 04:04 shared
[2023-08-15 04:33:02] -rw-r--r-- 2 m m   927522 Aug 15 04:04 input.tar.gz
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     5728 Aug 15 04:04 init_data.xml
[2023-08-15 04:33:02] -rw-r--r-- 2 m m 38971704 Aug 15 04:04 EVNT.04972714._000035.pool.root.1
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m        0 Aug 15 04:04 boinc_lockfile
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     2657 Aug 15 04:04 pandaJob.out
[2023-08-15 04:33:02] -rw------- 1 m m      424 Aug 15 04:04 setup.sh.local
[2023-08-15 04:33:02] -rw------- 1 m m  1386440 Aug 15 04:08 cric_ddmendpoints.json
[2023-08-15 04:33:02] -rw------- 1 m m  1015234 Aug 15 04:08 agis_schedconf.cvmfs.json
[2023-08-15 04:33:02] drwx------ 5 m m     4096 Aug 15 04:09 pilot3
[2023-08-15 04:33:02] -rw------- 1 m m  1776865 Aug 15 04:25 output.1.fc4bd8e6-26dd-412a-ad28-e94b01b55e4e_25155.pool.root
[2023-08-15 04:33:02] -rw------- 1 m m     1017 Aug 15 04:25 memory_monitor_summary.json
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      533 Aug 15 04:25 boinc_task_state.xml
[2023-08-15 04:33:02] -rw------- 1 m m   182837 Aug 15 04:28 fc4bd8e6-26dd-412a-ad28-e94b01b55e4e_25155.1.job.log.tgz
[2023-08-15 04:33:02] -rw------- 1 m m     7383 Aug 15 04:32 heartbeat.json
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m     8192 Aug 15 04:32 boinc_mmap_file
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m       25 Aug 15 04:32 wrapper_checkpoint.txt
[2023-08-15 04:33:02] -rw------- 1 m m     8361 Aug 15 04:33 pilotlog.txt
[2023-08-15 04:33:02] -rw------- 1 m m   675715 Aug 15 04:33 fc4bd8e6-26dd-412a-ad28-e94b01b55e4e_25155.1.job.log
[2023-08-15 04:33:02] -rw------- 1 m m      464 Aug 15 04:33 output.list
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m      748 Aug 15 04:33 runtime_log
[2023-08-15 04:33:02] -rw------- 1 m m  2652160 Aug 15 04:33 result.tar.gz
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m    11913 Aug 15 04:33 runtime_log.err
[2023-08-15 04:33:02] -rw------- 1 m m      627 Aug 15 04:33 EMcNDmuTzp3n7Olcko1bjSoqABFKDmABFKDm7AsVDmxHPKDmilMEhn.diag
[2023-08-15 04:33:02] -rw-rw-r-- 1 m m    28710 Aug 15 04:33 stderr.txt
[2023-08-15 04:33:02] HITS file was successfully produced:
[2023-08-15 04:33:02] -rw------- 1 m m 1776865 Aug 15 04:25 shared/HITS.pool.root.1
[2023-08-15 04:33:02]  *** Contents of shared directory: ***
[2023-08-15 04:33:02] total 43316
[2023-08-15 04:33:02] -rw-r--r-- 2 m m    17632 Aug 15 04:04 start_atlas.sh
[2023-08-15 04:33:02] -rw-r--r-- 2 m m   927522 Aug 15 04:04 input.tar.gz
[2023-08-15 04:33:02] -rw-r--r-- 2 m m 38971704 Aug 15 04:04 ATLAS.root_0
[2023-08-15 04:33:02] -rw------- 1 m m  1776865 Aug 15 04:25 HITS.pool.root.1
[2023-08-15 04:33:02] -rw------- 1 m m  2652160 Aug 15 04:33 result.tar.gz
04:33:03 (6241): run_atlas exited; CPU time 679.376323
04:33:03 (6241): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN