Name r7TNDmG0zp3n7Olcko1bjSoqABFKDmABFKDm7AsVDm3HPKDmDN0YQn_0
Workunit 2325327
Created 15 Aug 2023, 3:34:30 UTC
Sent 15 Aug 2023, 3:35:34 UTC
Report deadline 22 Aug 2023, 3:35:34 UTC
Received 15 Aug 2023, 4:00:14 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 22 min 19 sec
CPU time 8 min 22 sec
Validate state Valid
Credit 16.11
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.50 GB
Peak swap size 2.12 GB
Peak disk usage 79.93 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
04:36:40 (31507): wrapper (7.7.26015): starting
04:36:40 (31507): wrapper: running run_atlas (--nthreads 4)
[2023-08-15 04:36:40] Arguments: --nthreads 4
[2023-08-15 04:36:40] Threads: 4
[2023-08-15 04:36:40] Checking for CVMFS
[2023-08-15 04:36:40] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-15 04:36:40] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-15 04:36:40] Running cvmfs_config stat atlas.cern.ch
[2023-08-15 04:36:40] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-15 04:36:40] 2.9.0.0 6385 32 38196 122467 3 73 3285764 4194305 0 130560 0 99279 99.524 66806 404 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-08-15 04:36:40] CVMFS is ok
[2023-08-15 04:36:40] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-15 04:36:40] Checking for apptainer binary...
[2023-08-15 04:36:40] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-15 04:36:40] Running /usr/bin/apptainer --version
[2023-08-15 04:36:40] apptainer version 1.0.3
[2023-08-15 04:36:40] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-15 04:36:40] TeeC16
[2023-08-15 04:36:40] apptainer works
[2023-08-15 04:36:40] Set ATHENA_PROC_NUMBER=4
[2023-08-15 04:36:40] Set ATHENA_CORE_NUMBER=4
[2023-08-15 04:36:40] Starting ATLAS job with PandaID=5932323063
[2023-08-15 04:36:40] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-15 04:58:56]  *** The last 200 lines of the pilot log: ***
[2023-08-15 04:58:56] 2023-08-15 03:58:00,894 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:00,894 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:03,397 | INFO     | monitor loop #193: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:03,432 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:03,432 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:05,935 | INFO     | monitor loop #194: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:05,978 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:05,979 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:08,482 | INFO     | monitor loop #195: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:08,525 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:08,526 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:11,029 | INFO     | monitor loop #196: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:11,078 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:11,078 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:13,581 | INFO     | monitor loop #197: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:13,626 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:13,627 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:16,130 | INFO     | monitor loop #198: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:16,176 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:16,176 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:18,679 | INFO     | monitor loop #199: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:18,724 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:18,724 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:21,227 | INFO     | monitor loop #200: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:21,278 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:21,278 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:23,781 | INFO     | monitor loop #201: job 0:5932323063 is in state 'stageout'
[2023-08-15 04:58:56] 2023-08-15 03:58:23,827 | INFO     | number of running child processes to parent process 10088: 1
[2023-08-15 04:58:56] 2023-08-15 03:58:23,828 | INFO     | maximum number of monitored processes: 5
[2023-08-15 04:58:56] 2023-08-15 03:58:24,745 | INFO     | 1293s have passed since pilot start
[2023-08-15 04:58:56] 2023-08-15 03:58:25,500 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-15 04:58:56] 2023-08-15 03:58:25,636 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-15 04:58:56] 2023-08-15 03:58:25,636 | WARNING  | cache file=/home/m/BOINC/slots/2/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/2/agis_ddmendpoints.ag
[2023-08-15 04:58:56] 2023-08-15 03:58:25,697 | INFO     | transferring file f1c3667f-4f40-45d9-b5f1-d95facad1122_61186.1.job.log.tgz from /home/m/BOINC/slots/2/PanDA_Pilot-5932323063/f1c3667f-4f40-45d9-b5f1-d95facad1122_6
[2023-08-15 04:58:56] 2023-08-15 03:58:25,697 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/2/PanDA_Pilot-5932323063/f1c3667f-4f40-45d9-b5f1-d95facad1122_61186.1.job.log.tgz /home/m/BOINC/slots/2/f1c3
[2023-08-15 04:58:56] 2023-08-15 03:58:25,712 | INFO     | Adding to output.list: f1c3667f-4f40-45d9-b5f1-d95facad1122_61186.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/fb/57/f1c3667f-4f40-
[2023-08-15 04:58:56] 2023-08-15 03:58:25,713 | INFO     | summary of transferred files:
[2023-08-15 04:58:56] 2023-08-15 03:58:25,713 | INFO     |  -- lfn=f1c3667f-4f40-45d9-b5f1-d95facad1122_61186.1.job.log.tgz, status_code=0, status=transferred
[2023-08-15 04:58:56] 2023-08-15 03:58:25,713 | INFO     | stage-out finished correctly
[2023-08-15 04:58:56] 2023-08-15 03:58:26,331 | INFO     | monitor loop #202: job 0:5932323063 is in state 'finished'
[2023-08-15 04:58:56] 2023-08-15 03:58:26,331 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-15 04:58:56] 2023-08-15 03:58:27,406 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-15 04:58:56] 2023-08-15 03:58:28,661 | INFO     | job 5932323063 has state=finished
[2023-08-15 04:58:56] 2023-08-15 03:58:28,661 | INFO     | preparing for final server update for job 5932323063 in state='finished'
[2023-08-15 04:58:56] 2023-08-15 03:58:28,661 | INFO     | this job has now completed (state=finished)
[2023-08-15 04:58:56] 2023-08-15 03:58:28,662 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-15 04:58:56] 2023-08-15 03:58:28,662 | INFO     | job 5932323063 has finished - writing final server update
[2023-08-15 04:58:56] 2023-08-15 03:58:28,662 | WARNING  | wrong length of table data, x=[1692071130.0, 1692071191.0, 1692071252.0, 1692071313.0, 1692071374.0], y=[1160260.0, 1630350.0, 1649450.0, 1650314.0, 1656670.0] (mu
[2023-08-15 04:58:56] 2023-08-15 03:58:28,663 | INFO     | total number of processed events: 2 (read)
[2023-08-15 04:58:56] 2023-08-15 03:58:28,681 | INFO     | executing command: lscpu
[2023-08-15 04:58:56] 2023-08-15 03:58:28,695 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-08-15 04:58:56] 2023-08-15 03:58:28,695 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-15 04:58:56] 2023-08-15 03:58:28,718 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-15 04:58:56] 2023-08-15 03:58:28,833 | INFO     | monitor loop #203: job 0:5932323063 is in state 'finished'
[2023-08-15 04:58:56] 2023-08-15 03:58:28,833 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-15 04:58:56] 2023-08-15 03:58:31,337 | INFO     | monitor loop #204: job 0:5932323063 is in state 'finished'
[2023-08-15 04:58:56] 2023-08-15 03:58:31,338 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-15 04:58:56] 2023-08-15 03:58:33,839 | INFO     | monitor loop #205: job 0:5932323063 is in state 'finished'
[2023-08-15 04:58:56] 2023-08-15 03:58:33,840 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-15 04:58:56] 2023-08-15 03:58:36,341 | INFO     | monitor loop #206: job 0:5932323063 is in state 'finished'
[2023-08-15 04:58:56] 2023-08-15 03:58:36,341 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-15 04:58:56] 2023-08-15 03:58:36,437 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-15 04:58:56] 2023-08-15 03:58:36,438 | INFO     | using path: /home/m/BOINC/slots/2/PanDA_Pilot-5932323063/memory_monitor_summary.json (trf name=prmon)
[2023-08-15 04:58:56] 2023-08-15 03:58:36,439 | INFO     | extracted standard info from prmon json
[2023-08-15 04:58:56] 2023-08-15 03:58:36,439 | INFO     | extracted standard memory fields from prmon json
[2023-08-15 04:58:56] 2023-08-15 03:58:36,439 | INFO     | ..............................
[2023-08-15 04:58:56] 2023-08-15 03:58:36,439 | INFO     | . Timing measurements:
[2023-08-15 04:58:56] 2023-08-15 03:58:36,439 | INFO     | . get job = 49 s
[2023-08-15 04:58:56] 2023-08-15 03:58:36,439 | INFO     | . initial setup = 60 s
[2023-08-15 04:58:56] 2023-08-15 03:58:36,439 | INFO     | . payload setup = 8 s
[2023-08-15 04:58:56] 2023-08-15 03:58:36,440 | INFO     | . stage-in = 74 s
[2023-08-15 04:58:56] 2023-08-15 03:58:36,440 | INFO     | . payload execution = 726 s
[2023-08-15 04:58:56] 2023-08-15 03:58:36,440 | INFO     | . stage-out = 357 s
[2023-08-15 04:58:56] 2023-08-15 03:58:36,440 | INFO     | ..............................
[2023-08-15 04:58:56] 2023-08-15 03:58:36,538 | INFO     | 
[2023-08-15 04:58:56] 2023-08-15 03:58:36,538 | INFO     | job summary report
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | --------------------------------------------------
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | PanDA job id: 5932323063
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | task id: NULL
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | errors: (none)
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | pilot state: finished 
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | transexitcode: 0
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | exeerrorcode: 0
[2023-08-15 04:58:56] 2023-08-15 03:58:36,539 | INFO     | exeerrordiag: 
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | exitcode: 0
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | exitmsg: OK
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | cpuconsumptiontime: 512 s
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | nevents: 2
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | neventsw: 0
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | pid: 10088
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | pgrp: 10088
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | corecount: 4
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | event service: False
[2023-08-15 04:58:56] 2023-08-15 03:58:36,540 | INFO     | sizes: {0: 2483979, 1: 2484178, 11: 2484324, 22: 2484352, 33: 2484380, 43: 2484408, 54: 2484564, 64: 2484592, 75: 2484648, 79: 2484736, 86: 2484792, 738: 2506860, 
[2023-08-15 04:58:56] 2023-08-15 03:58:36,541 | INFO     | --------------------------------------------------
[2023-08-15 04:58:56] 2023-08-15 03:58:36,541 | INFO     | 
[2023-08-15 04:58:56] 2023-08-15 03:58:36,541 | INFO     | executing command: ls -lF /home/m/BOINC/slots/2
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,557 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | job 5932323063 has completed (purged errors)
[2023-08-15 04:58:56] 2023-08-15 03:58:36,558 | INFO     | overall cleanup function is called
[2023-08-15 04:58:56] 2023-08-15 03:58:37,565 | INFO     | --- collectZombieJob: --- 10, [10088]
[2023-08-15 04:58:56] 2023-08-15 03:58:37,565 | INFO     | zombie collector trying to kill pid 10088
[2023-08-15 04:58:56] 2023-08-15 03:58:37,565 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-15 04:58:56] 2023-08-15 03:58:38,570 | INFO     | collected zombie processes
[2023-08-15 04:58:56] 2023-08-15 03:58:38,571 | INFO     | will now attempt to kill all subprocesses of pid=10088
[2023-08-15 04:58:56] 2023-08-15 03:58:38,615 | INFO     | process IDs to be killed: [10088] (in reverse order)
[2023-08-15 04:58:56] 2023-08-15 03:58:38,651 | WARNING  | found no corresponding commands to process id(s)
[2023-08-15 04:58:56] 2023-08-15 03:58:38,651 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-15 04:58:56] 2023-08-15 03:58:38,651 | INFO     | ready for new job
[2023-08-15 04:58:56] 2023-08-15 03:58:38,651 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-15 04:58:56] 2023-08-15 03:58:38,652 | INFO     | *************************************
[2023-08-15 04:58:56] 2023-08-15 03:58:38,652 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-15 04:58:56] 2023-08-15 03:58:38,652 | INFO     | *************************************
[2023-08-15 04:58:56] 2023-08-15 03:58:38,652 | INFO     | 
[2023-08-15 04:58:56] 2023-08-15 03:58:38,669 | INFO     | architecture information:
[2023-08-15 04:58:56] 2023-08-15 03:58:38,669 | INFO     | executing command: cat /etc/os-release
[2023-08-15 04:58:56] 2023-08-15 03:58:38,684 | INFO     | cat /etc/os-release:
[2023-08-15 04:58:56] NAME="CentOS Linux"
[2023-08-15 04:58:56] VERSION="7 (Core)"
[2023-08-15 04:58:56] ID="centos"
[2023-08-15 04:58:56] ID_LIKE="rhel fedora"
[2023-08-15 04:58:56] VERSION_ID="7"
[2023-08-15 04:58:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-15 04:58:56] ANSI_COLOR="0;31"
[2023-08-15 04:58:56] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-15 04:58:56] HOME_URL="https://www.centos.org/"
[2023-08-15 04:58:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-15 04:58:56] 
[2023-08-15 04:58:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-15 04:58:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-15 04:58:56] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-15 04:58:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-15 04:58:56] 
[2023-08-15 04:58:56] 2023-08-15 03:58:38,685 | INFO     | *************************************
[2023-08-15 04:58:56] 2023-08-15 03:58:39,188 | INFO     | executing command: df -mP /home/m/BOINC/slots/2
[2023-08-15 04:58:56] 2023-08-15 03:58:39,200 | INFO     | sufficient remaining disk space (423661404160 B)
[2023-08-15 04:58:56] 2023-08-15 03:58:39,201 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-15 04:58:56] 2023-08-15 03:58:39,201 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-15 04:58:56] 2023-08-15 03:58:39,201 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-15 04:58:56] 2023-08-15 03:58:39,781 | INFO     | found 0 job(s) in 20 queues
[2023-08-15 04:58:56] 2023-08-15 03:58:39,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-15 04:58:56] 2023-08-15 03:58:39,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-15 04:58:56] 2023-08-15 03:58:39,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-15 04:58:56] 2023-08-15 03:58:39,849 | INFO     | aborting loop
[2023-08-15 04:58:56] 2023-08-15 03:58:40,205 | INFO     | [job] retrieve thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:40,364 | INFO     | [payload] validate_pre thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:40,441 | INFO     | [payload] control thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:40,497 | INFO     | [data] copytool_in thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:40,786 | INFO     | [payload] failed_post thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:40,854 | INFO     | [job] job monitor thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:41,205 | INFO     | [data] copytool_out thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:41,244 | INFO     | [data] control thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:41,351 | INFO     | [payload] validate_post thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:41,490 | INFO     | [job] validate thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:41,549 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-15 04:58:56] 2023-08-15 03:58:41,685 | INFO     | [job] create_data_payload thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:41,685 | INFO     | [job] control thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:41,686 | INFO     | [payload] execute_payloads thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:42,477 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-15 04:58:56] 2023-08-15 03:58:42,554 | INFO     | [job] queue monitor thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:46,483 | INFO     | [data] queue_monitor thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:49,957 | INFO     | job.realtimelogging is not enabled
[2023-08-15 04:58:56] 2023-08-15 03:58:50,961 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-15 04:58:56] 2023-08-15 03:58:51,211 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139796587865920)>', '<ExcThread(monitor, started 139796311680768)>']
[2023-08-15 04:58:56] 2023-08-15 03:58:51,839 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-15 04:58:56] 2023-08-15 03:58:51,839 | INFO     | [monitor] control thread has ended
[2023-08-15 04:58:56] 2023-08-15 03:58:56,236 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-15 04:58:56] 2023-08-15 03:58:56,237 | INFO     | traces error code: 0
[2023-08-15 04:58:56] 2023-08-15 03:58:56,237 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-15 04:58:56] 2023-08-15 03:58:56,299 [wrapper] ==== pilot stdout END ====
[2023-08-15 04:58:56] 2023-08-15 03:58:56,303 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-15 04:58:56] 2023-08-15 03:58:56,307 [wrapper] pilotpid: 2492
[2023-08-15 04:58:56] 2023-08-15 03:58:56,310 [wrapper] Pilot exit status: 0
[2023-08-15 04:58:56] 2023-08-15 03:58:56,322 [wrapper] pandaids: 5932323063
[2023-08-15 04:58:56] 2023-08-15 03:58:56,328 [wrapper] apfmon messages muted
[2023-08-15 04:58:56] 2023-08-15 03:58:56,332 [wrapper] Test setup, not cleaning
[2023-08-15 04:58:56] 2023-08-15 03:58:56,335 [wrapper] ==== wrapper stdout END ====
[2023-08-15 04:58:56] 2023-08-15 03:58:56,338 [wrapper] ==== wrapper stderr END ====
[2023-08-15 04:58:56] 2023-08-15 03:58:56,344 [wrapper] wrapperexiting ec=0, duration=1335
[2023-08-15 04:58:56] 2023-08-15 03:58:56,348 [wrapper] apfmon messages muted
[2023-08-15 04:58:56]  *** Error codes and diagnostics ***
[2023-08-15 04:58:56]     "exeErrorCode": 0,
[2023-08-15 04:58:56]     "exeErrorDiag": "",
[2023-08-15 04:58:56]     "pilotErrorCode": 0,
[2023-08-15 04:58:56]     "pilotErrorDiag": "",
[2023-08-15 04:58:56]  *** Listing of results directory ***
[2023-08-15 04:58:56] total 43108
[2023-08-15 04:58:56] -rwx------ 1 m m    27277 Aug 15 04:34 runpilot2-wrapper.sh
[2023-08-15 04:58:56] -rw-r--r-- 1 m m     4388 Aug 15 04:34 queuedata.json
[2023-08-15 04:58:56] -rw-r--r-- 1 m m   418016 Aug 15 04:34 pilot3.tar.gz
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m      107 Aug 15 04:36 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-15 04:58:56] -rwxr-xr-x 1 m m     7986 Aug 15 04:36 run_atlas
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m      112 Aug 15 04:36 job.xml
[2023-08-15 04:58:56] -rw-r--r-- 2 m m    17604 Aug 15 04:36 start_atlas.sh
[2023-08-15 04:58:56] drwxrwx--x 2 m m     4096 Aug 15 04:36 shared
[2023-08-15 04:58:56] -rw-r--r-- 2 m m   428859 Aug 15 04:36 input.tar.gz
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m     5728 Aug 15 04:36 init_data.xml
[2023-08-15 04:58:56] -rw-r--r-- 2 m m 37498453 Aug 15 04:36 EVNT.04972714._000025.pool.root.1
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m        0 Aug 15 04:36 boinc_lockfile
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m     2750 Aug 15 04:36 pandaJob.out
[2023-08-15 04:58:56] -rw------- 1 m m      424 Aug 15 04:36 setup.sh.local
[2023-08-15 04:58:56] -rw------- 1 m m  1386440 Aug 15 04:37 cric_ddmendpoints.json
[2023-08-15 04:58:56] -rw------- 1 m m  1015234 Aug 15 04:37 agis_schedconf.cvmfs.json
[2023-08-15 04:58:56] drwx------ 4 m m     4096 Aug 15 04:38 pilot3
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m      532 Aug 15 04:52 boinc_task_state.xml
[2023-08-15 04:58:56] -rw------- 1 m m  1238775 Aug 15 04:52 output.1.f1c3667f-4f40-45d9-b5f1-d95facad1122_61186.pool.root
[2023-08-15 04:58:56] -rw------- 1 m m     1017 Aug 15 04:52 memory_monitor_summary.json
[2023-08-15 04:58:56] -rw------- 1 m m   161362 Aug 15 04:55 f1c3667f-4f40-45d9-b5f1-d95facad1122_61186.1.job.log.tgz
[2023-08-15 04:58:56] -rw------- 1 m m     8059 Aug 15 04:58 heartbeat.json
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m     8192 Aug 15 04:58 boinc_mmap_file
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m       25 Aug 15 04:58 wrapper_checkpoint.txt
[2023-08-15 04:58:56] -rw------- 1 m m     3969 Aug 15 04:58 pilotlog.txt
[2023-08-15 04:58:56] -rw------- 1 m m   184404 Aug 15 04:58 f1c3667f-4f40-45d9-b5f1-d95facad1122_61186.1.job.log
[2023-08-15 04:58:56] -rw------- 1 m m      464 Aug 15 04:58 output.list
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m      748 Aug 15 04:58 runtime_log
[2023-08-15 04:58:56] -rw------- 1 m m  1607680 Aug 15 04:58 result.tar.gz
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m    11905 Aug 15 04:58 runtime_log.err
[2023-08-15 04:58:56] -rw------- 1 m m      627 Aug 15 04:58 r7TNDmG0zp3n7Olcko1bjSoqABFKDmABFKDm7AsVDm3HPKDmDN0YQn.diag
[2023-08-15 04:58:56] -rw-rw-r-- 1 m m    22589 Aug 15 04:58 stderr.txt
[2023-08-15 04:58:56] HITS file was successfully produced:
[2023-08-15 04:58:56] -rw------- 1 m m 1238775 Aug 15 04:52 shared/HITS.pool.root.1
[2023-08-15 04:58:56]  *** Contents of shared directory: ***
[2023-08-15 04:58:56] total 39844
[2023-08-15 04:58:56] -rw-r--r-- 2 m m    17604 Aug 15 04:36 start_atlas.sh
[2023-08-15 04:58:56] -rw-r--r-- 2 m m   428859 Aug 15 04:36 input.tar.gz
[2023-08-15 04:58:56] -rw-r--r-- 2 m m 37498453 Aug 15 04:36 ATLAS.root_0
[2023-08-15 04:58:56] -rw------- 1 m m  1238775 Aug 15 04:52 HITS.pool.root.1
[2023-08-15 04:58:56] -rw------- 1 m m  1607680 Aug 15 04:58 result.tar.gz
04:58:57 (31507): run_atlas exited; CPU time 502.832353
04:58:57 (31507): called boinc_finish(0)

</stderr_txt>
]]>


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