Name 5YVMDmfyJq3n7Olcko1bjSoqABFKDmABFKDm7AsVDmkLPKDmBoUpLo_0
Workunit 2325484
Created 16 Aug 2023, 0:54:10 UTC
Sent 16 Aug 2023, 0:57:36 UTC
Report deadline 23 Aug 2023, 0:57:36 UTC
Received 16 Aug 2023, 1:28:00 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 27 min 53 sec
CPU time 14 min 10 sec
Validate state Valid
Credit 20.02
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.49 GB
Peak swap size 2.12 GB
Peak disk usage 80.95 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:58:42 (29727): wrapper (7.7.26015): starting
01:58:42 (29727): wrapper: running run_atlas (--nthreads 4)
[2023-08-16 01:58:42] Arguments: --nthreads 4
[2023-08-16 01:58:42] Threads: 4
[2023-08-16 01:58:42] Checking for CVMFS
[2023-08-16 01:58:42] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-16 01:58:42] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-16 01:58:42] Running cvmfs_config stat atlas.cern.ch
[2023-08-16 01:58:43] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-16 01:58:43] 2.9.0.0 4364 32 37572 122503 3 73 3437494 4194305 0 130560 0 99622 99.968 25872 546 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-08-16 01:58:43] CVMFS is ok
[2023-08-16 01:58:43] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-16 01:58:43] Checking for apptainer binary...
[2023-08-16 01:58:43] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-16 01:58:43] Running /usr/bin/apptainer --version
[2023-08-16 01:58:43] apptainer version 1.0.3
[2023-08-16 01:58:43] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-16 01:58:43] TeeC16
[2023-08-16 01:58:43] apptainer works
[2023-08-16 01:58:43] Set ATHENA_PROC_NUMBER=4
[2023-08-16 01:58:43] Set ATHENA_CORE_NUMBER=4
[2023-08-16 01:58:43] Starting ATLAS job with PandaID=5933261586
[2023-08-16 01:58:43] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-16 02:26:33]  *** The last 200 lines of the pilot log: ***
[2023-08-16 02:26:33] 2023-08-16 01:25:34,862 | INFO     | monitor loop #214: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:34,942 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:34,942 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:37,443 | INFO     | monitor loop #215: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:37,506 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:37,507 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:40,011 | INFO     | monitor loop #216: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:40,096 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:40,097 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:42,602 | INFO     | monitor loop #217: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:42,662 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:42,662 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:45,164 | INFO     | monitor loop #218: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:45,222 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:45,223 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:47,727 | INFO     | monitor loop #219: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:47,785 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:47,786 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:50,291 | INFO     | monitor loop #220: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:50,351 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:50,351 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:52,854 | INFO     | monitor loop #221: job 0:5933261586 is in state 'stageout'
[2023-08-16 02:26:33] 2023-08-16 01:25:52,918 | INFO     | number of running child processes to parent process 8298: 1
[2023-08-16 02:26:33] 2023-08-16 01:25:52,918 | INFO     | maximum number of monitored processes: 8
[2023-08-16 02:26:33] 2023-08-16 01:25:54,567 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-16 02:26:33] 2023-08-16 01:25:54,706 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-16 02:26:33] 2023-08-16 01:25:54,706 | WARNING  | cache file=/home/m/BOINC/slots/3/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/3/agis_ddmendpoints.ag
[2023-08-16 02:26:33] 2023-08-16 01:25:54,778 | INFO     | transferring file 7a050221-810d-4fb6-a07a-007b69c58c6e_4946.1.job.log.tgz from /home/m/BOINC/slots/3/PanDA_Pilot-5933261586/7a050221-810d-4fb6-a07a-007b69c58c6e_49
[2023-08-16 02:26:33] 2023-08-16 01:25:54,778 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/3/PanDA_Pilot-5933261586/7a050221-810d-4fb6-a07a-007b69c58c6e_4946.1.job.log.tgz /home/m/BOINC/slots/3/7a050
[2023-08-16 02:26:33] 2023-08-16 01:25:54,815 | INFO     | Adding to output.list: 7a050221-810d-4fb6-a07a-007b69c58c6e_4946.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/8b/b7/7a050221-810d-4
[2023-08-16 02:26:33] 2023-08-16 01:25:54,816 | INFO     | summary of transferred files:
[2023-08-16 02:26:33] 2023-08-16 01:25:54,816 | INFO     |  -- lfn=7a050221-810d-4fb6-a07a-007b69c58c6e_4946.1.job.log.tgz, status_code=0, status=transferred
[2023-08-16 02:26:33] 2023-08-16 01:25:54,816 | INFO     | stage-out finished correctly
[2023-08-16 02:26:33] 2023-08-16 01:25:55,438 | INFO     | monitor loop #222: job 0:5933261586 is in state 'finished'
[2023-08-16 02:26:33] 2023-08-16 01:25:55,438 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-16 02:26:33] 2023-08-16 01:25:56,455 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-16 02:26:33] 2023-08-16 01:25:57,947 | INFO     | monitor loop #223: job 0:5933261586 is in state 'finished'
[2023-08-16 02:26:33] 2023-08-16 01:25:57,947 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-16 02:26:33] 2023-08-16 01:25:58,147 | INFO     | job 5933261586 has state=finished
[2023-08-16 02:26:33] 2023-08-16 01:25:58,147 | INFO     | preparing for final server update for job 5933261586 in state='finished'
[2023-08-16 02:26:33] 2023-08-16 01:25:58,148 | INFO     | this job has now completed (state=finished)
[2023-08-16 02:26:33] 2023-08-16 01:25:58,148 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-16 02:26:33] 2023-08-16 01:25:58,148 | INFO     | job 5933261586 has finished - writing final server update
[2023-08-16 02:26:33] 2023-08-16 01:25:58,149 | INFO     | fitting pss+swap vs Time
[2023-08-16 02:26:33] 2023-08-16 01:25:58,150 | INFO     | current memory leak: 265.83 B/s (using 11 data points, chi2=0.07)
[2023-08-16 02:26:33] 2023-08-16 01:25:58,151 | INFO     | total number of processed events: 2 (read)
[2023-08-16 02:26:33] 2023-08-16 01:25:58,172 | INFO     | executing command: lscpu
[2023-08-16 02:26:33] 2023-08-16 01:25:58,193 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-08-16 02:26:33] 2023-08-16 01:25:58,194 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-16 02:26:33] 2023-08-16 01:25:58,226 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-16 02:26:33] 2023-08-16 01:26:00,450 | INFO     | monitor loop #224: job 0:5933261586 is in state 'finished'
[2023-08-16 02:26:33] 2023-08-16 01:26:00,451 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-16 02:26:33] 2023-08-16 01:26:02,962 | INFO     | monitor loop #225: job 0:5933261586 is in state 'finished'
[2023-08-16 02:26:33] 2023-08-16 01:26:02,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-16 02:26:33] 2023-08-16 01:26:05,474 | INFO     | monitor loop #226: job 0:5933261586 is in state 'finished'
[2023-08-16 02:26:33] 2023-08-16 01:26:05,483 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-16 02:26:33] 2023-08-16 01:26:07,995 | INFO     | monitor loop #227: job 0:5933261586 is in state 'finished'
[2023-08-16 02:26:33] 2023-08-16 01:26:07,995 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-16 02:26:33] 2023-08-16 01:26:10,499 | INFO     | monitor loop #228: job 0:5933261586 is in state 'finished'
[2023-08-16 02:26:33] 2023-08-16 01:26:10,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-16 02:26:33] 2023-08-16 01:26:11,224 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-16 02:26:33] 2023-08-16 01:26:11,225 | INFO     | using path: /home/m/BOINC/slots/3/PanDA_Pilot-5933261586/memory_monitor_summary.json (trf name=prmon)
[2023-08-16 02:26:33] 2023-08-16 01:26:11,226 | INFO     | extracted standard info from prmon json
[2023-08-16 02:26:33] 2023-08-16 01:26:11,226 | INFO     | extracted standard memory fields from prmon json
[2023-08-16 02:26:33] 2023-08-16 01:26:11,226 | INFO     | ..............................
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | . Timing measurements:
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | . get job = 58 s
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | . initial setup = 64 s
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | . payload setup = 12 s
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | . stage-in = 49 s
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | . payload execution = 1053 s
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | . stage-out = 356 s
[2023-08-16 02:26:33] 2023-08-16 01:26:11,227 | INFO     | ..............................
[2023-08-16 02:26:33] 2023-08-16 01:26:11,564 | INFO     | 
[2023-08-16 02:26:33] 2023-08-16 01:26:11,564 | INFO     | job summary report
[2023-08-16 02:26:33] 2023-08-16 01:26:11,564 | INFO     | --------------------------------------------------
[2023-08-16 02:26:33] 2023-08-16 01:26:11,564 | INFO     | PanDA job id: 5933261586
[2023-08-16 02:26:33] 2023-08-16 01:26:11,564 | INFO     | task id: NULL
[2023-08-16 02:26:33] 2023-08-16 01:26:11,564 | INFO     | errors: (none)
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | pilot state: finished 
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | transexitcode: 0
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | exeerrorcode: 0
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | exeerrordiag: 
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | exitcode: 0
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | exitmsg: OK
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | cpuconsumptiontime: 867 s
[2023-08-16 02:26:33] 2023-08-16 01:26:11,565 | INFO     | nevents: 2
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | neventsw: 0
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | pid: 8298
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | pgrp: 8298
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | corecount: 4
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | event service: False
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | sizes: {0: 2482641, 1: 2484176, 2: 2484176, 12: 2484350, 23: 2484378, 34: 2484406, 44: 2484562, 55: 2484590, 58: 2484678, 66: 2484706, 1069: 2504812, 1426: 2514116
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | --------------------------------------------------
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | 
[2023-08-16 02:26:33] 2023-08-16 01:26:11,566 | INFO     | executing command: ls -lF /home/m/BOINC/slots/3
[2023-08-16 02:26:33] 2023-08-16 01:26:11,590 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,590 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,590 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,590 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,590 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,590 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,591 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,592 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,592 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,592 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-16 02:26:33] 2023-08-16 01:26:11,592 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,592 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-16 02:26:33] 2023-08-16 01:26:11,592 | INFO     | job 5933261586 has completed (purged errors)
[2023-08-16 02:26:33] 2023-08-16 01:26:11,592 | INFO     | overall cleanup function is called
[2023-08-16 02:26:33] 2023-08-16 01:26:12,599 | INFO     | --- collectZombieJob: --- 10, [8298]
[2023-08-16 02:26:33] 2023-08-16 01:26:12,599 | INFO     | zombie collector trying to kill pid 8298
[2023-08-16 02:26:33] 2023-08-16 01:26:12,599 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-16 02:26:33] 2023-08-16 01:26:13,603 | INFO     | collected zombie processes
[2023-08-16 02:26:33] 2023-08-16 01:26:13,603 | INFO     | will now attempt to kill all subprocesses of pid=8298
[2023-08-16 02:26:33] 2023-08-16 01:26:13,674 | INFO     | process IDs to be killed: [8298] (in reverse order)
[2023-08-16 02:26:33] 2023-08-16 01:26:13,718 | WARNING  | found no corresponding commands to process id(s)
[2023-08-16 02:26:33] 2023-08-16 01:26:13,719 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-16 02:26:33] 2023-08-16 01:26:13,719 | INFO     | ready for new job
[2023-08-16 02:26:33] 2023-08-16 01:26:13,719 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-16 02:26:33] 2023-08-16 01:26:13,720 | INFO     | *************************************
[2023-08-16 02:26:33] 2023-08-16 01:26:13,720 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-16 02:26:33] 2023-08-16 01:26:13,720 | INFO     | *************************************
[2023-08-16 02:26:33] 2023-08-16 01:26:13,721 | INFO     | 
[2023-08-16 02:26:33] 2023-08-16 01:26:13,739 | INFO     | architecture information:
[2023-08-16 02:26:33] 2023-08-16 01:26:13,740 | INFO     | executing command: cat /etc/os-release
[2023-08-16 02:26:33] 2023-08-16 01:26:13,758 | INFO     | cat /etc/os-release:
[2023-08-16 02:26:33] NAME="CentOS Linux"
[2023-08-16 02:26:33] VERSION="7 (Core)"
[2023-08-16 02:26:33] ID="centos"
[2023-08-16 02:26:33] ID_LIKE="rhel fedora"
[2023-08-16 02:26:33] VERSION_ID="7"
[2023-08-16 02:26:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-16 02:26:33] ANSI_COLOR="0;31"
[2023-08-16 02:26:33] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-16 02:26:33] HOME_URL="https://www.centos.org/"
[2023-08-16 02:26:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-16 02:26:33] 
[2023-08-16 02:26:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-16 02:26:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-16 02:26:33] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-16 02:26:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-16 02:26:33] 
[2023-08-16 02:26:33] 2023-08-16 01:26:13,758 | INFO     | *************************************
[2023-08-16 02:26:33] 2023-08-16 01:26:14,260 | INFO     | executing command: df -mP /home/m/BOINC/slots/3
[2023-08-16 02:26:33] 2023-08-16 01:26:14,289 | INFO     | sufficient remaining disk space (423559692288 B)
[2023-08-16 02:26:33] 2023-08-16 01:26:14,289 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-16 02:26:33] 2023-08-16 01:26:14,289 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-16 02:26:33] 2023-08-16 01:26:14,289 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-08-16 02:26:33] 2023-08-16 01:26:14,289 | INFO     | found 0 job(s) in 20 queues
[2023-08-16 02:26:33] 2023-08-16 01:26:14,289 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-16 02:26:33] 2023-08-16 01:26:14,290 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-16 02:26:33] 2023-08-16 01:26:14,290 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-16 02:26:33] 2023-08-16 01:26:14,290 | INFO     | aborting loop
[2023-08-16 02:26:33] 2023-08-16 01:26:15,291 | INFO     | [job] retrieve thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:15,295 | INFO     | [job] job monitor thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:15,351 | INFO     | [payload] control thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:15,483 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-16 02:26:33] 2023-08-16 01:26:15,591 | INFO     | [data] copytool_in thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:15,635 | INFO     | [payload] failed_post thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:15,711 | INFO     | [job] validate thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:15,770 | INFO     | [job] control thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:16,016 | INFO     | [job] create_data_payload thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:16,106 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-16 02:26:33] 2023-08-16 01:26:16,265 | INFO     | [payload] execute_payloads thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:16,291 | INFO     | [payload] validate_post thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:16,351 | INFO     | [data] control thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:16,369 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-16 02:26:33] 2023-08-16 01:26:16,403 | INFO     | [payload] validate_pre thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:17,378 | INFO     | [job] queue monitor thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:17,488 | INFO     | [data] copytool_out thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:20,119 | INFO     | [data] queue_monitor thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:24,958 | INFO     | job.realtimelogging is not enabled
[2023-08-16 02:26:33] 2023-08-16 01:26:25,963 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-16 02:26:33] 2023-08-16 01:26:27,515 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140540493166400)>', '<ExcThread(monitor, started 140539693352704)>']
[2023-08-16 02:26:33] 2023-08-16 01:26:28,351 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-16 02:26:33] 2023-08-16 01:26:28,351 | INFO     | [monitor] control thread has ended
[2023-08-16 02:26:33] 2023-08-16 01:26:32,539 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-16 02:26:33] 2023-08-16 01:26:32,539 | INFO     | traces error code: 0
[2023-08-16 02:26:33] 2023-08-16 01:26:32,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-16 02:26:33] 2023-08-16 01:26:32,636 [wrapper] ==== pilot stdout END ====
[2023-08-16 02:26:33] 2023-08-16 01:26:32,649 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-16 02:26:33] 2023-08-16 01:26:32,654 [wrapper] pilotpid: 418
[2023-08-16 02:26:33] 2023-08-16 01:26:32,659 [wrapper] Pilot exit status: 0
[2023-08-16 02:26:33] 2023-08-16 01:26:32,694 [wrapper] pandaids: 5933261586
[2023-08-16 02:26:33] 2023-08-16 01:26:32,713 [wrapper] apfmon messages muted
[2023-08-16 02:26:33] 2023-08-16 01:26:32,718 [wrapper] Test setup, not cleaning
[2023-08-16 02:26:33] 2023-08-16 01:26:32,725 [wrapper] ==== wrapper stdout END ====
[2023-08-16 02:26:33] 2023-08-16 01:26:32,729 [wrapper] ==== wrapper stderr END ====
[2023-08-16 02:26:33] 2023-08-16 01:26:32,739 [wrapper] wrapperexiting ec=0, duration=1669
[2023-08-16 02:26:33] 2023-08-16 01:26:32,744 [wrapper] apfmon messages muted
[2023-08-16 02:26:33]  *** Error codes and diagnostics ***
[2023-08-16 02:26:33]     "exeErrorCode": 0,
[2023-08-16 02:26:33]     "exeErrorDiag": "",
[2023-08-16 02:26:33]     "pilotErrorCode": 0,
[2023-08-16 02:26:33]     "pilotErrorDiag": "",
[2023-08-16 02:26:33]  *** Listing of results directory ***
[2023-08-16 02:26:33] total 43704
[2023-08-16 02:26:33] -rw-r--r-- 1 m m   418016 Aug 16 01:32 pilot3.tar.gz
[2023-08-16 02:26:33] -rwx------ 1 m m    27277 Aug 16 01:54 runpilot2-wrapper.sh
[2023-08-16 02:26:33] -rw-r--r-- 1 m m     4388 Aug 16 01:54 queuedata.json
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m      107 Aug 16 01:58 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-16 02:26:33] -rwxr-xr-x 1 m m     7986 Aug 16 01:58 run_atlas
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m      112 Aug 16 01:58 job.xml
[2023-08-16 02:26:33] -rw-r--r-- 2 m m    17600 Aug 16 01:58 start_atlas.sh
[2023-08-16 02:26:33] drwxrwx--x 2 m m     4096 Aug 16 01:58 shared
[2023-08-16 02:26:33] -rw-r--r-- 2 m m   428865 Aug 16 01:58 input.tar.gz
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m     5728 Aug 16 01:58 init_data.xml
[2023-08-16 02:26:33] -rw-r--r-- 2 m m 37738636 Aug 16 01:58 EVNT.04972714._000024.pool.root.1
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m        0 Aug 16 01:58 boinc_lockfile
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m     2749 Aug 16 01:58 pandaJob.out
[2023-08-16 02:26:33] -rw------- 1 m m      424 Aug 16 01:58 setup.sh.local
[2023-08-16 02:26:33] -rw------- 1 m m  1386440 Aug 16 01:59 cric_ddmendpoints.json
[2023-08-16 02:26:33] -rw------- 1 m m  1015249 Aug 16 01:59 agis_schedconf.cvmfs.json
[2023-08-16 02:26:33] drwx------ 4 m m     4096 Aug 16 02:00 pilot3
[2023-08-16 02:26:33] -rw------- 1 m m  1402432 Aug 16 02:19 output.1.7a050221-810d-4fb6-a07a-007b69c58c6e_4946.pool.root
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m      533 Aug 16 02:19 boinc_task_state.xml
[2023-08-16 02:26:33] -rw------- 1 m m     1018 Aug 16 02:19 memory_monitor_summary.json
[2023-08-16 02:26:33] -rw------- 1 m m   163154 Aug 16 02:23 7a050221-810d-4fb6-a07a-007b69c58c6e_4946.1.job.log.tgz
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m     8192 Aug 16 02:26 boinc_mmap_file
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m       25 Aug 16 02:26 wrapper_checkpoint.txt
[2023-08-16 02:26:33] -rw------- 1 m m     6669 Aug 16 02:26 heartbeat.json
[2023-08-16 02:26:33] -rw------- 1 m m     4092 Aug 16 02:26 pilotlog.txt
[2023-08-16 02:26:33] -rw------- 1 m m   208783 Aug 16 02:26 7a050221-810d-4fb6-a07a-007b69c58c6e_4946.1.job.log
[2023-08-16 02:26:33] -rw------- 1 m m      460 Aug 16 02:26 output.list
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m      744 Aug 16 02:26 runtime_log
[2023-08-16 02:26:33] -rw------- 1 m m  1792000 Aug 16 02:26 result.tar.gz
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m    11871 Aug 16 02:26 runtime_log.err
[2023-08-16 02:26:33] -rw------- 1 m m      627 Aug 16 02:26 5YVMDmfyJq3n7Olcko1bjSoqABFKDmABFKDm7AsVDmkLPKDmBoUpLo.diag
[2023-08-16 02:26:33] -rw-rw-r-- 1 m m    22567 Aug 16 02:26 stderr.txt
[2023-08-16 02:26:33] HITS file was successfully produced:
[2023-08-16 02:26:33] -rw------- 1 m m 1402432 Aug 16 02:19 shared/HITS.pool.root.1
[2023-08-16 02:26:33]  *** Contents of shared directory: ***
[2023-08-16 02:26:33] total 40420
[2023-08-16 02:26:33] -rw-r--r-- 2 m m    17600 Aug 16 01:58 start_atlas.sh
[2023-08-16 02:26:33] -rw-r--r-- 2 m m   428865 Aug 16 01:58 input.tar.gz
[2023-08-16 02:26:33] -rw-r--r-- 2 m m 37738636 Aug 16 01:58 ATLAS.root_0
[2023-08-16 02:26:33] -rw------- 1 m m  1402432 Aug 16 02:19 HITS.pool.root.1
[2023-08-16 02:26:33] -rw------- 1 m m  1792000 Aug 16 02:26 result.tar.gz
02:26:34 (29727): run_atlas exited; CPU time 850.896472
02:26:34 (29727): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN