Name 4c5KDmEQeq3n7Olcko1bjSoqABFKDmABFKDm7AsVDmiPPKDmzYNnWm_1
Workunit 2325616
Created 16 Aug 2023, 23:56:32 UTC
Sent 16 Aug 2023, 23:57:24 UTC
Report deadline 23 Aug 2023, 23:57:24 UTC
Received 17 Aug 2023, 0:12:48 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4721
Run time 14 min 56 sec
CPU time 4 min 36 sec
Validate state Valid
Credit 17.34
Device peak FLOPS 6.59 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.58 GB
Peak swap size 2.14 GB
Peak disk usage 72.29 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
01:57:34 (600840): wrapper (7.7.26015): starting
01:57:34 (600840): wrapper: running run_atlas (--nthreads 1)
[2023-08-17 01:57:34] Arguments: --nthreads 1
[2023-08-17 01:57:34] Threads: 1
[2023-08-17 01:57:34] Checking for CVMFS
[2023-08-17 01:57:34] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-17 01:57:35] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-17 01:57:35] Running cvmfs_config stat atlas.cern.ch
[2023-08-17 01:57:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-17 01:57:35] 2.10.1.0 578662 17 42228 122543 2 73 2418290 4096001 0 130560 0 83533 99.998 901 846 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-08-17 01:57:35] CVMFS is ok
[2023-08-17 01:57:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-17 01:57:35] Checking for apptainer binary...
[2023-08-17 01:57:35] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-17 01:57:35] Running /usr/bin/apptainer --version
[2023-08-17 01:57:35] apptainer version 1.2.2-1.el9
[2023-08-17 01:57:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-17 01:57:35] P620-CentOS9
[2023-08-17 01:57:35] apptainer works
[2023-08-17 01:57:35] Starting ATLAS job with PandaID=5934174494
[2023-08-17 01:57:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-17 02:12:27]  *** The last 200 lines of the pilot log: ***
[2023-08-17 02:12:27] 2023-08-17 00:11:43,487 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:11:44,705 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-17 02:12:27] 2023-08-17 00:11:44,802 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-17 02:12:27] 2023-08-17 00:11:44,802 | INFO     | will try again after 17s..
[2023-08-17 02:12:27] 2023-08-17 00:11:45,990 | INFO     | monitor loop #154: job 0:5934174494 is in state 'stageout'
[2023-08-17 02:12:27] 2023-08-17 00:11:46,016 | INFO     | number of running child processes to parent process 611238: 1
[2023-08-17 02:12:27] 2023-08-17 00:11:46,017 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:11:48,519 | INFO     | monitor loop #155: job 0:5934174494 is in state 'stageout'
[2023-08-17 02:12:27] 2023-08-17 00:11:48,545 | INFO     | number of running child processes to parent process 611238: 1
[2023-08-17 02:12:27] 2023-08-17 00:11:48,545 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:11:51,046 | INFO     | monitor loop #156: job 0:5934174494 is in state 'stageout'
[2023-08-17 02:12:27] 2023-08-17 00:11:51,070 | INFO     | number of running child processes to parent process 611238: 1
[2023-08-17 02:12:27] 2023-08-17 00:11:51,070 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:11:53,573 | INFO     | monitor loop #157: job 0:5934174494 is in state 'stageout'
[2023-08-17 02:12:27] 2023-08-17 00:11:53,598 | INFO     | number of running child processes to parent process 611238: 1
[2023-08-17 02:12:27] 2023-08-17 00:11:53,598 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:11:56,099 | INFO     | monitor loop #158: job 0:5934174494 is in state 'stageout'
[2023-08-17 02:12:27] 2023-08-17 00:11:56,100 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 779001 B
[2023-08-17 02:12:27] 2023-08-17 00:11:56,100 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 8989 B
[2023-08-17 02:12:27] 2023-08-17 00:11:56,100 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2023-08-17 02:12:27] 2023-08-17 00:11:56,106 | INFO     | sufficient remaining disk space (22953328640 B)
[2023-08-17 02:12:27] 2023-08-17 00:11:56,106 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-08-17 02:12:27] 2023-08-17 00:11:56,107 | INFO     | size of work directory /var/lib/boinc/slots/12/PanDA_Pilot-5934174494: 1113115 B (within 61362667520 B limit)
[2023-08-17 02:12:27] 2023-08-17 00:11:56,107 | INFO     | pfn file=/var/lib/boinc/slots/12/PanDA_Pilot-5934174494/output.1.72d37d98-0ab3-434f-a550-f169c14c78e3_73828.pool.root does not exist (skip from workdir size calcul
[2023-08-17 02:12:27] 2023-08-17 00:11:56,107 | INFO     | total size of present files: 0 B (workdir size: 1113115 B)
[2023-08-17 02:12:27] 2023-08-17 00:11:56,107 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/12/PanDA_Pilot-5934174494/output.1.72d37d98-0ab3-434f-a550-f169c14c78e3_73828.pool.root since it 
[2023-08-17 02:12:27] 2023-08-17 00:11:56,130 | INFO     | number of running child processes to parent process 611238: 1
[2023-08-17 02:12:27] 2023-08-17 00:11:56,130 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:11:58,633 | INFO     | monitor loop #159: job 0:5934174494 is in state 'stageout'
[2023-08-17 02:12:27] 2023-08-17 00:11:58,657 | INFO     | number of running child processes to parent process 611238: 1
[2023-08-17 02:12:27] 2023-08-17 00:11:58,657 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:12:01,158 | INFO     | monitor loop #160: job 0:5934174494 is in state 'stageout'
[2023-08-17 02:12:27] 2023-08-17 00:12:01,183 | INFO     | number of running child processes to parent process 611238: 1
[2023-08-17 02:12:27] 2023-08-17 00:12:01,183 | INFO     | maximum number of monitored processes: 5
[2023-08-17 02:12:27] 2023-08-17 00:12:01,884 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-17 02:12:27] 2023-08-17 00:12:01,948 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-17 02:12:27] 2023-08-17 00:12:01,949 | WARNING  | cache file=/var/lib/boinc/slots/12/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/12/agis_ddmendpoint
[2023-08-17 02:12:27] 2023-08-17 00:12:01,982 | INFO     | transferring file 72d37d98-0ab3-434f-a550-f169c14c78e3_73828.1.job.log.tgz from /var/lib/boinc/slots/12/PanDA_Pilot-5934174494/72d37d98-0ab3-434f-a550-f169c14c78e3
[2023-08-17 02:12:27] 2023-08-17 00:12:01,982 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-5934174494/72d37d98-0ab3-434f-a550-f169c14c78e3_73828.1.job.log.tgz /var/lib/boinc/slots/12/
[2023-08-17 02:12:27] 2023-08-17 00:12:01,991 | INFO     | Adding to output.list: 72d37d98-0ab3-434f-a550-f169c14c78e3_73828.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/fd/25/72d37d98-0ab3-
[2023-08-17 02:12:27] 2023-08-17 00:12:01,991 | INFO     | summary of transferred files:
[2023-08-17 02:12:27] 2023-08-17 00:12:01,991 | INFO     |  -- lfn=72d37d98-0ab3-434f-a550-f169c14c78e3_73828.1.job.log.tgz, status_code=0, status=transferred
[2023-08-17 02:12:27] 2023-08-17 00:12:01,991 | INFO     | stage-out finished correctly
[2023-08-17 02:12:27] 2023-08-17 00:12:02,050 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-17 02:12:27] 2023-08-17 00:12:02,751 | INFO     | job 5934174494 has state=finished
[2023-08-17 02:12:27] 2023-08-17 00:12:02,751 | INFO     | preparing for final server update for job 5934174494 in state='finished'
[2023-08-17 02:12:27] 2023-08-17 00:12:02,751 | INFO     | this job has now completed (state=finished)
[2023-08-17 02:12:27] 2023-08-17 00:12:02,751 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-17 02:12:27] 2023-08-17 00:12:02,752 | INFO     | job 5934174494 has finished - writing final server update
[2023-08-17 02:12:27] 2023-08-17 00:12:02,752 | WARNING  | wrong length of table data, x=[1692230423.0, 1692230484.0, 1692230545.0, 1692230606.0, 1692230667.0, 1692230728.0, 1692230789.0], y=[1572.0, 862984.0, 1143612.0, 1
[2023-08-17 02:12:27] 2023-08-17 00:12:02,752 | INFO     | total number of processed events: 2 (read)
[2023-08-17 02:12:27] 2023-08-17 00:12:02,753 | INFO     | executing command: lscpu
[2023-08-17 02:12:27] 2023-08-17 00:12:02,759 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-08-17 02:12:27] 2023-08-17 00:12:02,760 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-17 02:12:27] 2023-08-17 00:12:02,770 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-17 02:12:27] 2023-08-17 00:12:03,691 | INFO     | monitor loop #161: job 0:5934174494 is in state 'finished'
[2023-08-17 02:12:27] 2023-08-17 00:12:03,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-17 02:12:27] 2023-08-17 00:12:06,194 | INFO     | monitor loop #162: job 0:5934174494 is in state 'finished'
[2023-08-17 02:12:27] 2023-08-17 00:12:06,195 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-17 02:12:27] 2023-08-17 00:12:07,010 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-17 02:12:27] 2023-08-17 00:12:07,011 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-5934174494/memory_monitor_summary.json (trf name=prmon)
[2023-08-17 02:12:27] 2023-08-17 00:12:07,011 | INFO     | extracted standard info from prmon json
[2023-08-17 02:12:27] 2023-08-17 00:12:07,011 | INFO     | extracted standard memory fields from prmon json
[2023-08-17 02:12:27] 2023-08-17 00:12:07,011 | INFO     | ..............................
[2023-08-17 02:12:27] 2023-08-17 00:12:07,011 | INFO     | . Timing measurements:
[2023-08-17 02:12:27] 2023-08-17 00:12:07,012 | INFO     | . get job = 36 s
[2023-08-17 02:12:27] 2023-08-17 00:12:07,012 | INFO     | . initial setup = 61 s
[2023-08-17 02:12:27] 2023-08-17 00:12:07,012 | INFO     | . payload setup = 3 s
[2023-08-17 02:12:27] 2023-08-17 00:12:07,012 | INFO     | . stage-in = 48 s
[2023-08-17 02:12:27] 2023-08-17 00:12:07,012 | INFO     | . payload execution = 379 s
[2023-08-17 02:12:27] 2023-08-17 00:12:07,012 | INFO     | . stage-out = 320 s
[2023-08-17 02:12:27] 2023-08-17 00:12:07,012 | INFO     | ..............................
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | 
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | job summary report
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | --------------------------------------------------
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | PanDA job id: 5934174494
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | task id: NULL
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | errors: (none)
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | pilot state: finished 
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | transexitcode: 0
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | exeerrorcode: 0
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | exeerrordiag: 
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | exitcode: 0
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | exitmsg: OK
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | cpuconsumptiontime: 279 s
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | nevents: 2
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | neventsw: 0
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | pid: 611238
[2023-08-17 02:12:27] 2023-08-17 00:12:07,546 | INFO     | pgrp: 611238
[2023-08-17 02:12:27] 2023-08-17 00:12:07,547 | INFO     | corecount: 1
[2023-08-17 02:12:27] 2023-08-17 00:12:07,547 | INFO     | event service: False
[2023-08-17 02:12:27] 2023-08-17 00:12:07,547 | INFO     | sizes: {0: 2484156, 11: 2484302, 21: 2484330, 32: 2484358, 42: 2484386, 50: 2484474, 53: 2484630, 386: 2505324, 387: 2505323, 708: 2514747, 713: 2514913}
[2023-08-17 02:12:27] 2023-08-17 00:12:07,547 | INFO     | --------------------------------------------------
[2023-08-17 02:12:27] 2023-08-17 00:12:07,547 | INFO     | 
[2023-08-17 02:12:27] 2023-08-17 00:12:07,547 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2023-08-17 02:12:27] 2023-08-17 00:12:07,554 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | job 5934174494 has completed (purged errors)
[2023-08-17 02:12:27] 2023-08-17 00:12:07,555 | INFO     | overall cleanup function is called
[2023-08-17 02:12:27] 2023-08-17 00:12:08,561 | INFO     | --- collectZombieJob: --- 10, [611238]
[2023-08-17 02:12:27] 2023-08-17 00:12:08,561 | INFO     | zombie collector trying to kill pid 611238
[2023-08-17 02:12:27] 2023-08-17 00:12:08,561 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-17 02:12:27] 2023-08-17 00:12:09,562 | INFO     | collected zombie processes
[2023-08-17 02:12:27] 2023-08-17 00:12:09,562 | INFO     | will now attempt to kill all subprocesses of pid=611238
[2023-08-17 02:12:27] 2023-08-17 00:12:09,590 | INFO     | process IDs to be killed: [611238] (in reverse order)
[2023-08-17 02:12:27] 2023-08-17 00:12:09,605 | WARNING  | found no corresponding commands to process id(s)
[2023-08-17 02:12:27] 2023-08-17 00:12:09,605 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-17 02:12:27] 2023-08-17 00:12:09,605 | INFO     | ready for new job
[2023-08-17 02:12:27] 2023-08-17 00:12:09,605 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-17 02:12:27] 2023-08-17 00:12:09,606 | INFO     | *************************************
[2023-08-17 02:12:27] 2023-08-17 00:12:09,606 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-17 02:12:27] 2023-08-17 00:12:09,606 | INFO     | *************************************
[2023-08-17 02:12:27] 2023-08-17 00:12:09,606 | INFO     | 
[2023-08-17 02:12:27] 2023-08-17 00:12:09,606 | INFO     | pilot is running in a VM
[2023-08-17 02:12:27] 2023-08-17 00:12:09,606 | INFO     | architecture information:
[2023-08-17 02:12:27] 2023-08-17 00:12:09,606 | INFO     | executing command: cat /etc/os-release
[2023-08-17 02:12:27] 2023-08-17 00:12:09,614 | INFO     | cat /etc/os-release:
[2023-08-17 02:12:27] NAME="CentOS Linux"
[2023-08-17 02:12:27] VERSION="7 (Core)"
[2023-08-17 02:12:27] ID="centos"
[2023-08-17 02:12:27] ID_LIKE="rhel fedora"
[2023-08-17 02:12:27] VERSION_ID="7"
[2023-08-17 02:12:27] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-17 02:12:27] ANSI_COLOR="0;31"
[2023-08-17 02:12:27] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-17 02:12:27] HOME_URL="https://www.centos.org/"
[2023-08-17 02:12:27] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-17 02:12:27] 
[2023-08-17 02:12:27] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-17 02:12:27] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-17 02:12:27] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-17 02:12:27] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-17 02:12:27] 
[2023-08-17 02:12:27] 2023-08-17 00:12:09,614 | INFO     | *************************************
[2023-08-17 02:12:27] 2023-08-17 00:12:10,117 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2023-08-17 02:12:27] 2023-08-17 00:12:10,123 | INFO     | sufficient remaining disk space (22952280064 B)
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | INFO     | found 0 job(s) in 20 queues
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | INFO     | aborting loop
[2023-08-17 02:12:27] 2023-08-17 00:12:10,124 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-17 02:12:27] 2023-08-17 00:12:11,125 | INFO     | [job] retrieve thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,126 | INFO     | [job] job monitor thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,262 | INFO     | [job] control thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,355 | INFO     | [data] control thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,368 | INFO     | [job] validate thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,375 | INFO     | [payload] control thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,531 | INFO     | [payload] failed_post thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,635 | INFO     | [job] create_data_payload thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:11,635 | INFO     | [payload] validate_pre thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:12,042 | INFO     | [payload] validate_post thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:12,076 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-17 02:12:27] 2023-08-17 00:12:12,083 | INFO     | [payload] execute_payloads thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:12,126 | INFO     | [data] copytool_out thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:12,138 | INFO     | [data] copytool_in thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:12,616 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-17 02:12:27] 2023-08-17 00:12:13,077 | INFO     | [job] queue monitor thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:16,622 | INFO     | [data] queue_monitor thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:20,891 | INFO     | job.realtimelogging is not enabled
[2023-08-17 02:12:27] 2023-08-17 00:12:21,892 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-17 02:12:27] 2023-08-17 00:12:22,493 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139802839873344)>', '<ExcThread(monitor, started 139802192115456)>']
[2023-08-17 02:12:27] 2023-08-17 00:12:23,168 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-17 02:12:27] 2023-08-17 00:12:23,168 | INFO     | [monitor] control thread has ended
[2023-08-17 02:12:27] 2023-08-17 00:12:27,495 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-17 02:12:27] 2023-08-17 00:12:27,495 | INFO     | traces error code: 0
[2023-08-17 02:12:27] 2023-08-17 00:12:27,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-17 02:12:27] 2023-08-17 00:12:27,547 [wrapper] ==== pilot stdout END ====
[2023-08-17 02:12:27] 2023-08-17 00:12:27,548 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-17 02:12:27] 2023-08-17 00:12:27,549 [wrapper] pilotpid: 604014
[2023-08-17 02:12:27] 2023-08-17 00:12:27,550 [wrapper] Pilot exit status: 0
[2023-08-17 02:12:27] 2023-08-17 00:12:27,559 [wrapper] pandaids: 5934174494
[2023-08-17 02:12:27] 2023-08-17 00:12:27,564 [wrapper] apfmon messages muted
[2023-08-17 02:12:27] 2023-08-17 00:12:27,565 [wrapper] Test setup, not cleaning
[2023-08-17 02:12:27] 2023-08-17 00:12:27,566 [wrapper] ==== wrapper stdout END ====
[2023-08-17 02:12:27] 2023-08-17 00:12:27,571 [wrapper] ==== wrapper stderr END ====
[2023-08-17 02:12:27] 2023-08-17 00:12:27,573 [wrapper] wrapperexiting ec=0, duration=892
[2023-08-17 02:12:27] 2023-08-17 00:12:27,573 [wrapper] apfmon messages muted
[2023-08-17 02:12:27]  *** Error codes and diagnostics ***
[2023-08-17 02:12:27]     "exeErrorCode": 0,
[2023-08-17 02:12:27]     "exeErrorDiag": "",
[2023-08-17 02:12:27]     "pilotErrorCode": 0,
[2023-08-17 02:12:27]     "pilotErrorDiag": "",
[2023-08-17 02:12:27]  *** Listing of results directory ***
[2023-08-17 02:12:27] insgesamt 42812
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc     4388 17. Aug 00:41 queuedata.json
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc   418016 17. Aug 00:41 pilot3.tar.gz
[2023-08-17 02:12:27] -rwx------. 1 boinc boinc    27277 17. Aug 00:43 runpilot2-wrapper.sh
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc      107 17. Aug 01:57 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-17 02:12:27] -rwxr-xr-x. 1 boinc boinc     7986 17. Aug 01:57 run_atlas
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc      112 17. Aug 01:57 job.xml
[2023-08-17 02:12:27] -rw-r--r--. 2 boinc boinc    17604 17. Aug 01:57 start_atlas.sh
[2023-08-17 02:12:27] drwxrwx--x. 2 boinc boinc       68 17. Aug 01:57 shared
[2023-08-17 02:12:27] -rw-r--r--. 2 boinc boinc   428867 17. Aug 01:57 input.tar.gz
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc     6186 17. Aug 01:57 init_data.xml
[2023-08-17 02:12:27] -rw-r--r--. 2 boinc boinc 37438704 17. Aug 01:57 EVNT.04972714._000033.pool.root.1
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc        0 17. Aug 01:57 boinc_lockfile
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc     2752 17. Aug 01:57 pandaJob.out
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc      424 17. Aug 01:57 setup.sh.local
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc  1386440 17. Aug 01:58 cric_ddmendpoints.json
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc  1015299 17. Aug 01:58 agis_schedconf.cvmfs.json
[2023-08-17 02:12:27] drwx------. 4 boinc boinc     4096 17. Aug 01:59 pilot3
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc  1165554 17. Aug 02:06 output.1.72d37d98-0ab3-434f-a550-f169c14c78e3_73828.pool.root
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc     1011 17. Aug 02:06 memory_monitor_summary.json
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc      532 17. Aug 02:06 boinc_task_state.xml
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc   154128 17. Aug 02:09 72d37d98-0ab3-434f-a550-f169c14c78e3_73828.1.job.log.tgz
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc     8192 17. Aug 02:12 boinc_mmap_file
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc       24 17. Aug 02:12 wrapper_checkpoint.txt
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc     7358 17. Aug 02:12 heartbeat.json
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc     4155 17. Aug 02:12 pilotlog.txt
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc   148843 17. Aug 02:12 72d37d98-0ab3-434f-a550-f169c14c78e3_73828.1.job.log
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc      464 17. Aug 02:12 output.list
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc      748 17. Aug 02:12 runtime_log
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc  1484800 17. Aug 02:12 result.tar.gz
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc    11858 17. Aug 02:12 runtime_log.err
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc      626 17. Aug 02:12 4c5KDmEQeq3n7Olcko1bjSoqABFKDmABFKDm7AsVDmiPPKDmzYNnWm.diag
[2023-08-17 02:12:27] -rw-r--r--. 1 boinc boinc    22915 17. Aug 02:12 stderr.txt
[2023-08-17 02:12:27] HITS file was successfully produced:
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc 1165554 17. Aug 02:06 shared/HITS.pool.root.1
[2023-08-17 02:12:27]  *** Contents of shared directory: ***
[2023-08-17 02:12:27] insgesamt 39596
[2023-08-17 02:12:27] -rw-r--r--. 2 boinc boinc    17604 17. Aug 01:57 start_atlas.sh
[2023-08-17 02:12:27] -rw-r--r--. 2 boinc boinc   428867 17. Aug 01:57 input.tar.gz
[2023-08-17 02:12:27] -rw-r--r--. 2 boinc boinc 37438704 17. Aug 01:57 ATLAS.root_0
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc  1165554 17. Aug 02:06 HITS.pool.root.1
[2023-08-17 02:12:27] -rw-------. 1 boinc boinc  1484800 17. Aug 02:12 result.tar.gz
02:12:29 (600840): run_atlas exited; CPU time 276.248931
02:12:29 (600840): called boinc_finish(0)

</stderr_txt>
]]>


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