Name Xq8MDmH5dr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmXaPKDmhxEFwn_1
Workunit 2325963
Created 19 Aug 2023, 16:49:48 UTC
Sent 19 Aug 2023, 16:50:24 UTC
Report deadline 26 Aug 2023, 16:50:24 UTC
Received 19 Aug 2023, 17:07:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4721
Run time 16 min 57 sec
CPU time 4 min 49 sec
Validate state Valid
Credit 19.51
Device peak FLOPS 6.59 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.57 GB
Peak swap size 2.89 GB
Peak disk usage 76.54 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
18:50:34 (478257): wrapper (7.7.26015): starting
18:50:34 (478257): wrapper: running run_atlas (--nthreads 1)
[2023-08-19 18:50:34] Arguments: --nthreads 1
[2023-08-19 18:50:34] Threads: 1
[2023-08-19 18:50:34] Checking for CVMFS
[2023-08-19 18:50:36] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-19 18:50:38] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-19 18:50:38] Running cvmfs_config stat atlas.cern.ch
[2023-08-19 18:50:39] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-19 18:50:39] 2.10.1.0 478496 0 27300 122651 3 1 2828091 4096001 0 130560 0 0 100.000 0 0 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-08-19 18:50:39] CVMFS is ok
[2023-08-19 18:50:39] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-19 18:50:39] Checking for apptainer binary...
[2023-08-19 18:50:39] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-19 18:50:39] Running /usr/bin/apptainer --version
[2023-08-19 18:50:39] apptainer version 1.2.2-1.el9
[2023-08-19 18:50:39] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-19 18:50:39] P620-CentOS9
[2023-08-19 18:50:39] apptainer works
[2023-08-19 18:50:39] Starting ATLAS job with PandaID=5936274568
[2023-08-19 18:50:39] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-19 19:07:28]  *** The last 200 lines of the pilot log: ***
[2023-08-19 19:07:28] 2023-08-19 17:06:40,164 | INFO     | monitor loop #166: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:40,165 | INFO     | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 779386 B
[2023-08-19 19:07:28] 2023-08-19 17:06:40,165 | INFO     | payload log (payload.stdout) within allowed size limit (2147483648 B): 8989 B
[2023-08-19 19:07:28] 2023-08-19 17:06:40,165 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2023-08-19 19:07:28] 2023-08-19 17:06:40,172 | INFO     | sufficient remaining disk space (22445817856 B)
[2023-08-19 19:07:28] 2023-08-19 17:06:40,172 | INFO     | work directory size check will use 61362667520 B as a max limit (10% grace limit added)
[2023-08-19 19:07:28] 2023-08-19 17:06:40,172 | INFO     | size of work directory /var/lib/boinc/slots/12/PanDA_Pilot-5936274568: 1113978 B (within 61362667520 B limit)
[2023-08-19 19:07:28] 2023-08-19 17:06:40,173 | INFO     | pfn file=/var/lib/boinc/slots/12/PanDA_Pilot-5936274568/output.1.d7ec77ca-b953-4d11-8936-b669a664b679_53349.pool.root does not exist (skip from workdir size calcul
[2023-08-19 19:07:28] 2023-08-19 17:06:40,173 | INFO     | total size of present files: 0 B (workdir size: 1113978 B)
[2023-08-19 19:07:28] 2023-08-19 17:06:40,173 | INFO     | output file size check: skipping output file /var/lib/boinc/slots/12/PanDA_Pilot-5936274568/output.1.d7ec77ca-b953-4d11-8936-b669a664b679_53349.pool.root since it 
[2023-08-19 19:07:28] 2023-08-19 17:06:40,197 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:40,198 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:42,700 | INFO     | monitor loop #167: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:42,726 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:42,726 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:45,229 | INFO     | monitor loop #168: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:45,255 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:45,255 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:47,757 | INFO     | monitor loop #169: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:47,782 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:47,782 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:50,285 | INFO     | monitor loop #170: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:50,311 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:50,311 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:52,817 | INFO     | monitor loop #171: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:52,842 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:52,842 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:55,345 | INFO     | monitor loop #172: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:55,370 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:55,371 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:57,873 | INFO     | monitor loop #173: job 0:5936274568 is in state 'stageout'
[2023-08-19 19:07:28] 2023-08-19 17:06:57,931 | INFO     | number of running child processes to parent process 489293: 1
[2023-08-19 19:07:28] 2023-08-19 17:06:57,931 | INFO     | maximum number of monitored processes: 5
[2023-08-19 19:07:28] 2023-08-19 17:06:58,519 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-19 19:07:28] 2023-08-19 17:06:58,582 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-19 19:07:28] 2023-08-19 17:06:58,582 | WARNING  | cache file=/var/lib/boinc/slots/12/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/12/agis_ddmendpoint
[2023-08-19 19:07:28] 2023-08-19 17:06:58,613 | INFO     | transferring file d7ec77ca-b953-4d11-8936-b669a664b679_53349.1.job.log.tgz from /var/lib/boinc/slots/12/PanDA_Pilot-5936274568/d7ec77ca-b953-4d11-8936-b669a664b679
[2023-08-19 19:07:28] 2023-08-19 17:06:58,613 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/12/PanDA_Pilot-5936274568/d7ec77ca-b953-4d11-8936-b669a664b679_53349.1.job.log.tgz /var/lib/boinc/slots/12/
[2023-08-19 19:07:28] 2023-08-19 17:06:58,620 | INFO     | Adding to output.list: d7ec77ca-b953-4d11-8936-b669a664b679_53349.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e9/f8/d7ec77ca-b953-
[2023-08-19 19:07:28] 2023-08-19 17:06:58,620 | INFO     | summary of transferred files:
[2023-08-19 19:07:28] 2023-08-19 17:06:58,620 | INFO     |  -- lfn=d7ec77ca-b953-4d11-8936-b669a664b679_53349.1.job.log.tgz, status_code=0, status=transferred
[2023-08-19 19:07:28] 2023-08-19 17:06:58,620 | INFO     | stage-out finished correctly
[2023-08-19 19:07:28] 2023-08-19 17:06:58,688 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-19 19:07:28] 2023-08-19 17:07:00,434 | INFO     | monitor loop #174: job 0:5936274568 is in state 'finished'
[2023-08-19 19:07:28] 2023-08-19 17:07:00,435 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-19 19:07:28] 2023-08-19 17:07:01,504 | INFO     | job 5936274568 has state=finished
[2023-08-19 19:07:28] 2023-08-19 17:07:01,505 | INFO     | preparing for final server update for job 5936274568 in state='finished'
[2023-08-19 19:07:28] 2023-08-19 17:07:01,505 | INFO     | this job has now completed (state=finished)
[2023-08-19 19:07:28] 2023-08-19 17:07:01,505 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-19 19:07:28] 2023-08-19 17:07:01,505 | INFO     | job 5936274568 has finished - writing final server update
[2023-08-19 19:07:28] 2023-08-19 17:07:01,505 | WARNING  | wrong length of table data, x=[1692464345.0], y=[1726078.0] (must be same and length>=4)
[2023-08-19 19:07:28] 2023-08-19 17:07:01,506 | INFO     | total number of processed events: 2 (read)
[2023-08-19 19:07:28] 2023-08-19 17:07:01,507 | INFO     | executing command: lscpu
[2023-08-19 19:07:28] 2023-08-19 17:07:01,513 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-08-19 19:07:28] 2023-08-19 17:07:01,513 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-19 19:07:28] 2023-08-19 17:07:01,524 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-19 19:07:28] 2023-08-19 17:07:02,940 | INFO     | monitor loop #175: job 0:5936274568 is in state 'finished'
[2023-08-19 19:07:28] 2023-08-19 17:07:02,940 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-19 19:07:28] 2023-08-19 17:07:05,452 | INFO     | monitor loop #176: job 0:5936274568 is in state 'finished'
[2023-08-19 19:07:28] 2023-08-19 17:07:05,452 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-19 19:07:28] 2023-08-19 17:07:07,072 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-19 19:07:28] 2023-08-19 17:07:07,072 | INFO     | using path: /var/lib/boinc/slots/12/PanDA_Pilot-5936274568/memory_monitor_summary.json (trf name=prmon)
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | extracted standard info from prmon json
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | extracted standard memory fields from prmon json
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | ..............................
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | . Timing measurements:
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | . get job = 64 s
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | . initial setup = 42 s
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | . payload setup = 3 s
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | . stage-in = 63 s
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | . payload execution = 444 s
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | . stage-out = 335 s
[2023-08-19 19:07:28] 2023-08-19 17:07:07,073 | INFO     | ..............................
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | 
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | job summary report
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | --------------------------------------------------
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | PanDA job id: 5936274568
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | task id: NULL
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | errors: (none)
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | pilot state: finished 
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | transexitcode: 0
[2023-08-19 19:07:28] 2023-08-19 17:07:07,128 | INFO     | exeerrorcode: 0
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | exeerrordiag: 
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | exitcode: 0
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | exitmsg: OK
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | cpuconsumptiontime: 290 s
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | nevents: 2
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | neventsw: 0
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | pid: 489293
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | pgrp: 489293
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | corecount: 1
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | event service: False
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | sizes: {0: 2482595, 11: 2482741, 21: 2482769, 32: 2482797, 43: 2482825, 53: 2482853, 64: 2483009, 65: 2483125, 74: 2483153, 451: 2503876, 452: 2503875, 787: 251352
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | --------------------------------------------------
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | 
[2023-08-19 19:07:28] 2023-08-19 17:07:07,129 | INFO     | executing command: ls -lF /var/lib/boinc/slots/12
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,137 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,138 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,138 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-19 19:07:28] 2023-08-19 17:07:07,138 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,138 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-19 19:07:28] 2023-08-19 17:07:07,138 | INFO     | job 5936274568 has completed (purged errors)
[2023-08-19 19:07:28] 2023-08-19 17:07:07,138 | INFO     | overall cleanup function is called
[2023-08-19 19:07:28] 2023-08-19 17:07:08,144 | INFO     | --- collectZombieJob: --- 10, [489293]
[2023-08-19 19:07:28] 2023-08-19 17:07:08,144 | INFO     | zombie collector trying to kill pid 489293
[2023-08-19 19:07:28] 2023-08-19 17:07:08,144 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-19 19:07:28] 2023-08-19 17:07:09,149 | INFO     | collected zombie processes
[2023-08-19 19:07:28] 2023-08-19 17:07:09,150 | INFO     | will now attempt to kill all subprocesses of pid=489293
[2023-08-19 19:07:28] 2023-08-19 17:07:09,178 | INFO     | process IDs to be killed: [489293] (in reverse order)
[2023-08-19 19:07:28] 2023-08-19 17:07:09,195 | WARNING  | found no corresponding commands to process id(s)
[2023-08-19 19:07:28] 2023-08-19 17:07:09,195 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-19 19:07:28] 2023-08-19 17:07:09,195 | INFO     | ready for new job
[2023-08-19 19:07:28] 2023-08-19 17:07:09,195 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-19 19:07:28] 2023-08-19 17:07:09,195 | INFO     | *************************************
[2023-08-19 19:07:28] 2023-08-19 17:07:09,196 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-19 19:07:28] 2023-08-19 17:07:09,196 | INFO     | *************************************
[2023-08-19 19:07:28] 2023-08-19 17:07:09,196 | INFO     | 
[2023-08-19 19:07:28] 2023-08-19 17:07:09,196 | INFO     | pilot is running in a VM
[2023-08-19 19:07:28] 2023-08-19 17:07:09,196 | INFO     | architecture information:
[2023-08-19 19:07:28] 2023-08-19 17:07:09,196 | INFO     | executing command: cat /etc/os-release
[2023-08-19 19:07:28] 2023-08-19 17:07:09,202 | INFO     | cat /etc/os-release:
[2023-08-19 19:07:28] NAME="CentOS Linux"
[2023-08-19 19:07:28] VERSION="7 (Core)"
[2023-08-19 19:07:28] ID="centos"
[2023-08-19 19:07:28] ID_LIKE="rhel fedora"
[2023-08-19 19:07:28] VERSION_ID="7"
[2023-08-19 19:07:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-19 19:07:28] ANSI_COLOR="0;31"
[2023-08-19 19:07:28] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-19 19:07:28] HOME_URL="https://www.centos.org/"
[2023-08-19 19:07:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-19 19:07:28] 
[2023-08-19 19:07:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-19 19:07:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-19 19:07:28] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-19 19:07:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-19 19:07:28] 
[2023-08-19 19:07:28] 2023-08-19 17:07:09,202 | INFO     | *************************************
[2023-08-19 19:07:28] 2023-08-19 17:07:09,704 | INFO     | executing command: df -mP /var/lib/boinc/slots/12
[2023-08-19 19:07:28] 2023-08-19 17:07:09,711 | INFO     | sufficient remaining disk space (22445817856 B)
[2023-08-19 19:07:28] 2023-08-19 17:07:09,711 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-19 19:07:28] 2023-08-19 17:07:09,711 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-19 19:07:28] 2023-08-19 17:07:09,711 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-19 19:07:28] 2023-08-19 17:07:09,711 | INFO     | aborting loop
[2023-08-19 19:07:28] 2023-08-19 17:07:09,711 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-19 19:07:28] 2023-08-19 17:07:09,712 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-19 19:07:28] 2023-08-19 17:07:10,480 | INFO     | found 0 job(s) in 20 queues
[2023-08-19 19:07:28] 2023-08-19 17:07:10,480 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-19 19:07:28] 2023-08-19 17:07:10,480 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-19 19:07:28] 2023-08-19 17:07:10,712 | INFO     | [job] retrieve thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:10,712 | INFO     | [job] job monitor thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:10,919 | INFO     | [job] control thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:10,920 | INFO     | [data] control thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,103 | INFO     | [payload] failed_post thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,207 | INFO     | [job] validate thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,443 | INFO     | [job] create_data_payload thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,597 | INFO     | [payload] validate_pre thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,604 | INFO     | [payload] validate_post thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,704 | INFO     | [payload] execute_payloads thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,712 | INFO     | [data] copytool_out thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,822 | INFO     | [payload] control thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:11,984 | INFO     | [data] copytool_in thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:12,134 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-19 19:07:28] 2023-08-19 17:07:13,139 | INFO     | [job] queue monitor thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:13,715 | INFO     | [data] queue_monitor thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:20,530 | INFO     | job.realtimelogging is not enabled
[2023-08-19 19:07:28] 2023-08-19 17:07:21,532 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-19 19:07:28] 2023-08-19 17:07:23,601 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140295160862528)>', '<ExcThread(monitor, started 140294569850624)>']
[2023-08-19 19:07:28] 2023-08-19 17:07:24,521 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-19 19:07:28] 2023-08-19 17:07:24,521 | INFO     | [monitor] control thread has ended
[2023-08-19 19:07:28] 2023-08-19 17:07:28,622 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-19 19:07:28] 2023-08-19 17:07:28,622 | INFO     | traces error code: 0
[2023-08-19 19:07:28] 2023-08-19 17:07:28,622 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-19 19:07:28] 2023-08-19 17:07:28,660 [wrapper] ==== pilot stdout END ====
[2023-08-19 19:07:28] 2023-08-19 17:07:28,661 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-19 19:07:28] 2023-08-19 17:07:28,662 [wrapper] pilotpid: 482099
[2023-08-19 19:07:28] 2023-08-19 17:07:28,663 [wrapper] Pilot exit status: 0
[2023-08-19 19:07:28] 2023-08-19 17:07:28,668 [wrapper] pandaids: 5936274568
[2023-08-19 19:07:28] 2023-08-19 17:07:28,670 [wrapper] apfmon messages muted
[2023-08-19 19:07:28] 2023-08-19 17:07:28,671 [wrapper] Test setup, not cleaning
[2023-08-19 19:07:28] 2023-08-19 17:07:28,672 [wrapper] ==== wrapper stdout END ====
[2023-08-19 19:07:28] 2023-08-19 17:07:28,673 [wrapper] ==== wrapper stderr END ====
[2023-08-19 19:07:28] 2023-08-19 17:07:28,675 [wrapper] wrapperexiting ec=0, duration=1009
[2023-08-19 19:07:28] 2023-08-19 17:07:28,676 [wrapper] apfmon messages muted
[2023-08-19 19:07:28]  *** Error codes and diagnostics ***
[2023-08-19 19:07:28]     "exeErrorCode": 0,
[2023-08-19 19:07:28]     "exeErrorDiag": "",
[2023-08-19 19:07:28]     "pilotErrorCode": 0,
[2023-08-19 19:07:28]     "pilotErrorDiag": "",
[2023-08-19 19:07:28]  *** Listing of results directory ***
[2023-08-19 19:07:28] insgesamt 43172
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc     4388 19. Aug 18:31 queuedata.json
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc   418016 19. Aug 18:31 pilot3.tar.gz
[2023-08-19 19:07:28] -rwx------. 1 boinc boinc    27277 19. Aug 18:34 runpilot2-wrapper.sh
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc      107 19. Aug 18:50 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-19 19:07:28] -rwxr-xr-x. 1 boinc boinc     7986 19. Aug 18:50 run_atlas
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc      112 19. Aug 18:50 job.xml
[2023-08-19 19:07:28] -rw-r--r--. 2 boinc boinc    17604 19. Aug 18:50 start_atlas.sh
[2023-08-19 19:07:28] drwxrwx--x. 2 boinc boinc       68 19. Aug 18:50 shared
[2023-08-19 19:07:28] -rw-r--r--. 2 boinc boinc   428867 19. Aug 18:50 input.tar.gz
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc     6185 19. Aug 18:50 init_data.xml
[2023-08-19 19:07:28] -rw-r--r--. 2 boinc boinc 36949600 19. Aug 18:50 EVNT.04972714._000039.pool.root.1
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc        0 19. Aug 18:50 boinc_lockfile
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc     2757 19. Aug 18:50 pandaJob.out
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc      424 19. Aug 18:50 setup.sh.local
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc  1018389 19. Aug 18:50 agis_schedconf.cvmfs.json
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc  1385582 19. Aug 18:51 cric_ddmendpoints.json
[2023-08-19 19:07:28] drwx------. 4 boinc boinc     4096 19. Aug 18:52 pilot3
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc  1585240 19. Aug 19:01 output.1.d7ec77ca-b953-4d11-8936-b669a664b679_53349.pool.root
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc      532 19. Aug 19:01 boinc_task_state.xml
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc     1003 19. Aug 19:01 memory_monitor_summary.json
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc   154591 19. Aug 19:03 d7ec77ca-b953-4d11-8936-b669a664b679_53349.1.job.log.tgz
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc     7355 19. Aug 19:07 heartbeat.json
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc     8192 19. Aug 19:07 boinc_mmap_file
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc       25 19. Aug 19:07 wrapper_checkpoint.txt
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc     4032 19. Aug 19:07 pilotlog.txt
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc   156678 19. Aug 19:07 d7ec77ca-b953-4d11-8936-b669a664b679_53349.1.job.log
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc      464 19. Aug 19:07 output.list
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc      748 19. Aug 19:07 runtime_log
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc  1914880 19. Aug 19:07 result.tar.gz
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc      627 19. Aug 19:07 Xq8MDmH5dr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmXaPKDmhxEFwn.diag
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc    11859 19. Aug 19:07 runtime_log.err
[2023-08-19 19:07:28] -rw-r--r--. 1 boinc boinc    22738 19. Aug 19:07 stderr.txt
[2023-08-19 19:07:28] HITS file was successfully produced:
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc 1585240 19. Aug 19:01 shared/HITS.pool.root.1
[2023-08-19 19:07:28]  *** Contents of shared directory: ***
[2023-08-19 19:07:28] insgesamt 39948
[2023-08-19 19:07:28] -rw-r--r--. 2 boinc boinc    17604 19. Aug 18:50 start_atlas.sh
[2023-08-19 19:07:28] -rw-r--r--. 2 boinc boinc   428867 19. Aug 18:50 input.tar.gz
[2023-08-19 19:07:28] -rw-r--r--. 2 boinc boinc 36949600 19. Aug 18:50 ATLAS.root_0
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc  1585240 19. Aug 19:01 HITS.pool.root.1
[2023-08-19 19:07:28] -rw-------. 1 boinc boinc  1914880 19. Aug 19:07 result.tar.gz
19:07:30 (478257): run_atlas exited; CPU time 289.259657
19:07:30 (478257): called boinc_finish(0)

</stderr_txt>
]]>


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