Name | xL6MDmvsmr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDcPKDmUw4a4n_0 |
Workunit | 2326023 |
Created | 20 Aug 2023, 1:58:20 UTC |
Sent | 20 Aug 2023, 1:58:44 UTC |
Report deadline | 27 Aug 2023, 1:58:44 UTC |
Received | 20 Aug 2023, 2:27:30 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 26 min 18 sec |
CPU time | 11 min 44 sec |
Validate state | Valid |
Credit | 18.37 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.50 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 92.30 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 02:59:50 (3148): wrapper (7.7.26015): starting 02:59:50 (3148): wrapper: running run_atlas (--nthreads 4) [2023-08-20 02:59:50] Arguments: --nthreads 4 [2023-08-20 02:59:50] Threads: 4 [2023-08-20 02:59:50] Checking for CVMFS [2023-08-20 02:59:53] Probing /cvmfs/atlas.cern.ch... OK [2023-08-20 02:59:53] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-20 02:59:53] Running cvmfs_config stat atlas.cern.ch [2023-08-20 02:59:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-20 02:59:54] 2.9.0.0 3292 0 24676 122663 3 1 3129064 4194305 0 130560 0 0 0.000 829 526 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-20 02:59:54] CVMFS is ok [2023-08-20 02:59:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-20 02:59:54] Checking for apptainer binary... [2023-08-20 02:59:54] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-20 02:59:54] Running /usr/bin/apptainer --version [2023-08-20 02:59:54] apptainer version 1.0.3 [2023-08-20 02:59:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-20 02:59:54] TeeC16 [2023-08-20 02:59:54] apptainer works [2023-08-20 02:59:54] Set ATHENA_PROC_NUMBER=4 [2023-08-20 02:59:54] Set ATHENA_CORE_NUMBER=4 [2023-08-20 02:59:54] Starting ATLAS job with PandaID=5936746714 [2023-08-20 02:59:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-20 03:26:06] *** The last 200 lines of the pilot log: *** [2023-08-20 03:26:06] >>>>>>>>>>>>>>>>>>>>>>>>> Information for user <<<<<<<<<<<<<<<<<<<<<<<<< [2023-08-20 03:26:06] ************************************************************************ [2023-08-20 03:26:06] x86-64-v2 [2023-08-20 03:26:06] 2023-08-20 02:25:45,078 | INFO | pilot.user.atlas.utilities | get_cpu_arch | CPU arch script returned: x86-64-v2 [2023-08-20 03:26:06] 2023-08-20 02:25:45,078 | DEBUG | pilot.control.job | get_data_structure | cpu arch=x86-64-v2 [2023-08-20 03:26:06] 2023-08-20 02:25:45,078 | INFO | pilot.user.atlas.utilities | get_memory_values | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5936746714/memory_monitor_summary.json (trf name=prmon [2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | DEBUG | pilot.user.atlas.utilities | get_memory_monitor_info | summary_dictionary={'Avg': {'nprocs': 5.133, 'nthreads': 6.066, 'pss': 1278705.0, 'rchar': 68487597. [2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard info from prmon json [2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | INFO | pilot.user.atlas.utilities | get_memory_monitor_info | extracted standard memory fields from prmon json [2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | INFO | pilot.util.timing | timing_report | .............................. [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | . Timing measurements: [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | . get job = 87 s [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | . initial setup = 78 s [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | . payload setup = 41 s [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | . stage-in = 65 s [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | . payload execution = 903 s [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | . stage-out = 335 s [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO | pilot.util.timing | timing_report | .............................. [2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | DEBUG | pilot.control.job | send_state | data={'jobId': '5936746714', 'state': 'finished', 'timestamp': '2023-08-20T03:25:35+00:00', 'siteNam [2023-08-20 03:26:06] 2023-08-20 02:25:45,081 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5936746714', 'state': 'finished', 'timestamp': '2023-08-20T03:25:35 [2023-08-20 03:26:06] 2023-08-20 02:25:45,081 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /home/m/BOINC/slots/1/heartbeat.json [2023-08-20 03:26:06] 2023-08-20 02:25:45,081 | DEBUG | pilot.control.job | queue_monitor | job.completed=False [2023-08-20 03:26:06] 2023-08-20 02:25:45,161 | INFO | pilot.control.job | make_job_report | [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | job summary report [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | PanDA job id: 5936746714 [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 720 s [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.control.job | make_job_report | pid: 14275 [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.control.job | make_job_report | pgrp: 14275 [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.control.job | make_job_report | corecount: 4 [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.control.job | make_job_report | event service: False [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.control.job | make_job_report | sizes: {0: 2482217, 1: 2482416, 12: 2482562, 22: 2482590, 33: 2482618, 44: 2482646, 54: 2482802, 65: [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.control.job | make_job_report | [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | DEBUG | pilot.control.job | has_job_completed | ls -lF /home/m/BOINC/slots/1: [2023-08-20 03:26:06] [2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO | pilot.util.container | print_executable | executing command: ls -lF /home/m/BOINC/slots/1 [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | DEBUG | pilot.control.job | has_job_completed | total 44264 [2023-08-20 03:26:06] -rw------- 1 m m 625457 Aug 20 03:25 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log [2023-08-20 03:26:06] -rw------- 1 m m 182713 Aug 20 03:23 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log.tgz [2023-08-20 03:26:06] -rw-r--r-- 2 m m 37620382 Aug 20 02:59 EVNT.04972714._000038.pool.root.1 [2023-08-20 03:26:06] drwxrwx--- 2 m m 4096 Aug 20 03:25 PanDA_Pilot-5936746714/ [2023-08-20 03:26:06] -rw------- 1 m m 1018389 Aug 20 03:01 agis_schedconf.cvmfs.json [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 0 Aug 20 02:59 boinc_lockfile [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 8192 Aug 20 03:25 boinc_mmap_file [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 533 Aug 20 03:20 boinc_task_state.xml [2023-08-20 03:26:06] -rw------- 1 m m 1385582 Aug 20 03:01 cric_ddmendpoints.json [2023-08-20 03:26:06] -rw------- 1 m m 7386 Aug 20 03:25 heartbeat.json [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 5728 Aug 20 02:59 init_data.xml [2023-08-20 03:26:06] -rw-r--r-- 2 m m 927504 Aug 20 02:59 input.tar.gz [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 112 Aug 20 02:59 job.xml [2023-08-20 03:26:06] -rw------- 1 m m 1018 Aug 20 03:19 memory_monitor_summary.json [2023-08-20 03:26:06] -rw------- 1 m m 1859012 Aug 20 03:19 output.1.6046796b-f69c-434a-bc5f-d941b5b1137f_87180.pool.root [2023-08-20 03:26:06] -rw------- 1 m m 464 Aug 20 03:25 output.list [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 2657 Aug 20 02:59 pandaJob.out [2023-08-20 03:26:06] drwx------ 5 m m 4096 Aug 20 03:02 pilot3/ [2023-08-20 03:26:06] -rw------- 1 m m 918320 Aug 20 02:58 pilot3.tar.gz [2023-08-20 03:26:06] -rw------- 1 m m 610212 Aug 20 03:25 pilotlog.txt [2023-08-20 03:26:06] -rw-r--r-- 1 m m 4388 Aug 20 02:58 queuedata.json [2023-08-20 03:26:06] -rwxr-xr-x 1 m m 7986 Aug 20 02:59 run_atlas* [2023-08-20 03:26:06] -rwx------ 1 m m 27275 Aug 20 02:58 runpilot2-wrapper.sh* [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 407 Aug 20 02:59 runtime_log [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 7699 Aug 20 02:59 runtime_log.err [2023-08-20 03:26:06] -rw------- 1 m m 424 Aug 20 02:59 setup.sh.local [2023-08-20 03:26:06] drwxrwx--x 2 m m 4096 Aug 20 02:59 shared/ [2023-08-20 03:26:06] -rw-r--r-- 2 m m 17632 Aug 20 02:59 start_atlas.sh [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 1715 Aug 20 02:59 stderr.txt [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 107 Aug 20 02:59 wrapper_26015_x86_64-pc-linux-gnu [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 25 Aug 20 03:25 wrapper_checkpoint.txt [2023-08-20 03:26:06] -rw------- 1 m m 129 Aug 20 02:59 xL6MDmvsmr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDcPKDmUw4a4n.diag [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO | pilot.control.job | has_job_completed | job 5936746714 has completed (purged errors) [2023-08-20 03:26:06] 2023-08-20 02:25:45,180 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-08-20 03:26:06] 2023-08-20 02:25:45,180 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-08-20 03:26:06] 2023-08-20 02:25:45,193 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /home/m/BOINC/slots/1/PanDA_Pilot-5936746714 [2023-08-20 03:26:06] 2023-08-20 02:25:46,196 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [14275] [2023-08-20 03:26:06] 2023-08-20 02:25:46,196 | INFO | pilot.info.jobdata | collect_zombies | zombie collector trying to kill pid 14275 [2023-08-20 03:26:06] 2023-08-20 02:25:46,196 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-20 03:26:06] 2023-08-20 02:25:47,201 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-08-20 03:26:06] 2023-08-20 02:25:47,202 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=14275 [2023-08-20 03:26:06] 2023-08-20 02:25:47,239 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [14275] (in reverse order) [2023-08-20 03:26:06] 2023-08-20 02:25:47,269 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-08-20 03:26:06] 2023-08-20 02:25:47,269 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | WARNING | pilot.util.processes | kill_processes | exception caught: [Errno 22] Invalid argument: '/proc/1/cmdline' [2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | INFO | pilot.control.job | retrieve | ready for new job [2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.5.19 *** [2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-08-20 03:26:06] 2023-08-20 02:25:47,288 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-08-20 03:26:06] 2023-08-20 02:25:47,289 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-08-20 03:26:06] 2023-08-20 02:25:47,300 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-08-20 03:26:06] NAME="CentOS Linux" [2023-08-20 03:26:06] VERSION="7 (Core)" [2023-08-20 03:26:06] ID="centos" [2023-08-20 03:26:06] ID_LIKE="rhel fedora" [2023-08-20 03:26:06] VERSION_ID="7" [2023-08-20 03:26:06] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-20 03:26:06] ANSI_COLOR="0;31" [2023-08-20 03:26:06] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-20 03:26:06] HOME_URL="https://www.centos.org/" [2023-08-20 03:26:06] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-20 03:26:06] [2023-08-20 03:26:06] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-20 03:26:06] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-20 03:26:06] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-20 03:26:06] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-20 03:26:06] [2023-08-20 03:26:06] 2023-08-20 02:25:47,301 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-08-20 03:26:06] 2023-08-20 02:25:47,803 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /home/m/BOINC/slots/1 [2023-08-20 03:26:06] 2023-08-20 02:25:47,804 | INFO | pilot.util.container | print_executable | executing command: df -mP /home/m/BOINC/slots/1 [2023-08-20 03:26:06] 2023-08-20 02:25:47,816 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-08-20 03:26:06] /dev/sda1 455417 28176 404085 7% /home/m/BOINC/slots/1 [2023-08-20 03:26:06] 2023-08-20 02:25:47,816 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (423713832960 B) [2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration [2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | INFO | pilot.control.job | job_monitor | aborting loop [2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues [2023-08-20 03:26:06] 2023-08-20 02:25:47,818 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set [2023-08-20 03:26:06] 2023-08-20 02:25:47,818 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish [2023-08-20 03:26:06] 2023-08-20 02:25:48,389 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-08-20 03:26:06] 2023-08-20 02:25:48,647 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-08-20 03:26:06] 2023-08-20 02:25:48,735 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-08-20 03:26:06] 2023-08-20 02:25:48,822 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:48,823 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:48,856 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-08-20 03:26:06] 2023-08-20 02:25:49,309 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,395 | INFO | pilot.control.job | control | [job] control thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,452 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,471 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,572 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,572 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,635 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-20 03:26:06] 2023-08-20 02:25:49,732 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,740 | INFO | pilot.control.data | control | [data] control thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,861 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:49,907 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:50,164 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-20 03:26:06] 2023-08-20 02:25:50,652 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:51,170 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:53,641 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-08-20 03:26:06] 2023-08-20 02:25:58,563 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-08-20 03:26:06] 2023-08-20 02:25:58,563 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-08-20 03:26:06] 2023-08-20 02:25:58,563 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-08-20 03:26:06] 2023-08-20 02:25:59,569 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-08-20 03:26:06] 2023-08-20 02:26:01,250 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757 [2023-08-20 03:26:06] 2023-08-20 02:26:01,250 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted [2023-08-20 03:26:06] 2023-08-20 02:26:01,872 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring [2023-08-20 03:26:06] 2023-08-20 02:26:01,872 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | DEBUG | root | <module> | trace=<class 'pilot.workflow.generic.traces'> [2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | INFO | root | wrap_up | traces error code: 0 [2023-08-20 03:26:06] 2023-08-20 02:26:06,273 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-08-20 03:26:06] 2023-08-20 02:26:06,322 [wrapper] ==== pilot stdout END ==== [2023-08-20 03:26:06] 2023-08-20 02:26:06,325 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-20 03:26:06] 2023-08-20 02:26:06,328 [wrapper] pilotpid: 6761 [2023-08-20 03:26:06] 2023-08-20 02:26:06,330 [wrapper] Pilot exit status: 0 [2023-08-20 03:26:06] 2023-08-20 02:26:06,340 [wrapper] pandaids: 5936746714 [2023-08-20 03:26:06] 2023-08-20 02:26:06,347 [wrapper] apfmon messages muted [2023-08-20 03:26:06] 2023-08-20 02:26:06,350 [wrapper] Test setup, not cleaning [2023-08-20 03:26:06] 2023-08-20 02:26:06,353 [wrapper] ==== wrapper stdout END ==== [2023-08-20 03:26:06] 2023-08-20 02:26:06,356 [wrapper] ==== wrapper stderr END ==== [2023-08-20 03:26:06] 2023-08-20 02:26:06,362 [wrapper] wrapperexiting ec=0, duration=1572 [2023-08-20 03:26:06] 2023-08-20 02:26:06,365 [wrapper] apfmon messages muted [2023-08-20 03:26:06] *** Error codes and diagnostics *** [2023-08-20 03:26:06] "exeErrorCode": 0, [2023-08-20 03:26:06] "exeErrorDiag": "", [2023-08-20 03:26:06] "pilotErrorCode": 0, [2023-08-20 03:26:06] "pilotErrorDiag": "", [2023-08-20 03:26:06] *** Listing of results directory *** [2023-08-20 03:26:06] total 46360 [2023-08-20 03:26:06] -rwx------ 1 m m 27275 Aug 20 02:58 runpilot2-wrapper.sh [2023-08-20 03:26:06] -rw-r--r-- 1 m m 4388 Aug 20 02:58 queuedata.json [2023-08-20 03:26:06] -rw------- 1 m m 918320 Aug 20 02:58 pilot3.tar.gz [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 107 Aug 20 02:59 wrapper_26015_x86_64-pc-linux-gnu [2023-08-20 03:26:06] -rwxr-xr-x 1 m m 7986 Aug 20 02:59 run_atlas [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 112 Aug 20 02:59 job.xml [2023-08-20 03:26:06] -rw-r--r-- 2 m m 17632 Aug 20 02:59 start_atlas.sh [2023-08-20 03:26:06] drwxrwx--x 2 m m 4096 Aug 20 02:59 shared [2023-08-20 03:26:06] -rw-r--r-- 2 m m 927504 Aug 20 02:59 input.tar.gz [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 5728 Aug 20 02:59 init_data.xml [2023-08-20 03:26:06] -rw-r--r-- 2 m m 37620382 Aug 20 02:59 EVNT.04972714._000038.pool.root.1 [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 0 Aug 20 02:59 boinc_lockfile [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 2657 Aug 20 02:59 pandaJob.out [2023-08-20 03:26:06] -rw------- 1 m m 424 Aug 20 02:59 setup.sh.local [2023-08-20 03:26:06] -rw------- 1 m m 1385582 Aug 20 03:01 cric_ddmendpoints.json [2023-08-20 03:26:06] -rw------- 1 m m 1018389 Aug 20 03:01 agis_schedconf.cvmfs.json [2023-08-20 03:26:06] drwx------ 5 m m 4096 Aug 20 03:02 pilot3 [2023-08-20 03:26:06] -rw------- 1 m m 1859012 Aug 20 03:19 output.1.6046796b-f69c-434a-bc5f-d941b5b1137f_87180.pool.root [2023-08-20 03:26:06] -rw------- 1 m m 1018 Aug 20 03:19 memory_monitor_summary.json [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 533 Aug 20 03:20 boinc_task_state.xml [2023-08-20 03:26:06] -rw------- 1 m m 182713 Aug 20 03:23 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log.tgz [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 25 Aug 20 03:25 wrapper_checkpoint.txt [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 8192 Aug 20 03:25 boinc_mmap_file [2023-08-20 03:26:06] -rw------- 1 m m 7386 Aug 20 03:25 heartbeat.json [2023-08-20 03:26:06] -rw------- 1 m m 8547 Aug 20 03:26 pilotlog.txt [2023-08-20 03:26:06] -rw------- 1 m m 641899 Aug 20 03:26 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log [2023-08-20 03:26:06] -rw------- 1 m m 464 Aug 20 03:26 output.list [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 748 Aug 20 03:26 runtime_log [2023-08-20 03:26:06] -rw------- 1 m m 2703360 Aug 20 03:26 result.tar.gz [2023-08-20 03:26:06] -rw------- 1 m m 627 Aug 20 03:26 xL6MDmvsmr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDcPKDmUw4a4n.diag [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 11913 Aug 20 03:26 runtime_log.err [2023-08-20 03:26:06] -rw-rw-r-- 1 m m 28855 Aug 20 03:26 stderr.txt [2023-08-20 03:26:06] HITS file was successfully produced: [2023-08-20 03:26:06] -rw------- 1 m m 1859012 Aug 20 03:19 shared/HITS.pool.root.1 [2023-08-20 03:26:06] *** Contents of shared directory: *** [2023-08-20 03:26:06] total 42124 [2023-08-20 03:26:06] -rw-r--r-- 2 m m 17632 Aug 20 02:59 start_atlas.sh [2023-08-20 03:26:06] -rw-r--r-- 2 m m 927504 Aug 20 02:59 input.tar.gz [2023-08-20 03:26:06] -rw-r--r-- 2 m m 37620382 Aug 20 02:59 ATLAS.root_0 [2023-08-20 03:26:06] -rw------- 1 m m 1859012 Aug 20 03:19 HITS.pool.root.1 [2023-08-20 03:26:06] -rw------- 1 m m 2703360 Aug 20 03:26 result.tar.gz 03:26:08 (3148): run_atlas exited; CPU time 704.943366 03:26:08 (3148): called boinc_finish(0) </stderr_txt> ]]>
©2024 CERN