Name xL6MDmvsmr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDcPKDmUw4a4n_0
Workunit 2326023
Created 20 Aug 2023, 1:58:20 UTC
Sent 20 Aug 2023, 1:58:44 UTC
Report deadline 27 Aug 2023, 1:58:44 UTC
Received 20 Aug 2023, 2:27:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 26 min 18 sec
CPU time 11 min 44 sec
Validate state Valid
Credit 18.37
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.50 GB
Peak swap size 2.12 GB
Peak disk usage 92.30 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
02:59:50 (3148): wrapper (7.7.26015): starting
02:59:50 (3148): wrapper: running run_atlas (--nthreads 4)
[2023-08-20 02:59:50] Arguments: --nthreads 4
[2023-08-20 02:59:50] Threads: 4
[2023-08-20 02:59:50] Checking for CVMFS
[2023-08-20 02:59:53] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-20 02:59:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-20 02:59:53] Running cvmfs_config stat atlas.cern.ch
[2023-08-20 02:59:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-20 02:59:54] 2.9.0.0 3292 0 24676 122663 3 1 3129064 4194305 0 130560 0 0 0.000 829 526 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-08-20 02:59:54] CVMFS is ok
[2023-08-20 02:59:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-20 02:59:54] Checking for apptainer binary...
[2023-08-20 02:59:54] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-20 02:59:54] Running /usr/bin/apptainer --version
[2023-08-20 02:59:54] apptainer version 1.0.3
[2023-08-20 02:59:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-20 02:59:54] TeeC16
[2023-08-20 02:59:54] apptainer works
[2023-08-20 02:59:54] Set ATHENA_PROC_NUMBER=4
[2023-08-20 02:59:54] Set ATHENA_CORE_NUMBER=4
[2023-08-20 02:59:54] Starting ATLAS job with PandaID=5936746714
[2023-08-20 02:59:54] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-20 03:26:06]  *** The last 200 lines of the pilot log: ***
[2023-08-20 03:26:06] >>>>>>>>>>>>>>>>>>>>>>>>> Information for user <<<<<<<<<<<<<<<<<<<<<<<<<
[2023-08-20 03:26:06] ************************************************************************
[2023-08-20 03:26:06] x86-64-v2
[2023-08-20 03:26:06] 2023-08-20 02:25:45,078 | INFO     | pilot.user.atlas.utilities       | get_cpu_arch              | CPU arch script returned: x86-64-v2
[2023-08-20 03:26:06] 2023-08-20 02:25:45,078 | DEBUG    | pilot.control.job                | get_data_structure        | cpu arch=x86-64-v2
[2023-08-20 03:26:06] 2023-08-20 02:25:45,078 | INFO     | pilot.user.atlas.utilities       | get_memory_values         | using path: /home/m/BOINC/slots/1/PanDA_Pilot-5936746714/memory_monitor_summary.json (trf name=prmon
[2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | DEBUG    | pilot.user.atlas.utilities       | get_memory_monitor_info   | summary_dictionary={'Avg': {'nprocs': 5.133, 'nthreads': 6.066, 'pss': 1278705.0, 'rchar': 68487597.
[2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard info from prmon json
[2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | INFO     | pilot.user.atlas.utilities       | get_memory_monitor_info   | extracted standard memory fields from prmon json
[2023-08-20 03:26:06] 2023-08-20 02:25:45,079 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | . Timing measurements:
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | . get job = 87 s
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | . initial setup = 78 s
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 41 s
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 65 s
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 903 s
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 335 s
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-08-20 03:26:06] 2023-08-20 02:25:45,080 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5936746714', 'state': 'finished', 'timestamp': '2023-08-20T03:25:35+00:00', 'siteNam
[2023-08-20 03:26:06] 2023-08-20 02:25:45,081 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5936746714', 'state': 'finished', 'timestamp': '2023-08-20T03:25:35
[2023-08-20 03:26:06] 2023-08-20 02:25:45,081 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /home/m/BOINC/slots/1/heartbeat.json
[2023-08-20 03:26:06] 2023-08-20 02:25:45,081 | DEBUG    | pilot.control.job                | queue_monitor             | job.completed=False
[2023-08-20 03:26:06] 2023-08-20 02:25:45,161 | INFO     | pilot.control.job                | make_job_report           | 
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5936746714
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 720 s
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-08-20 03:26:06] 2023-08-20 02:25:45,162 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.control.job                | make_job_report           | pid: 14275
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.control.job                | make_job_report           | pgrp: 14275
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.control.job                | make_job_report           | corecount: 4
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2482217, 1: 2482416, 12: 2482562, 22: 2482590, 33: 2482618, 44: 2482646, 54: 2482802, 65:
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.control.job                | make_job_report           | 
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /home/m/BOINC/slots/1:
[2023-08-20 03:26:06] 
[2023-08-20 03:26:06] 2023-08-20 02:25:45,163 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /home/m/BOINC/slots/1
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | DEBUG    | pilot.control.job                | has_job_completed         | total 44264
[2023-08-20 03:26:06] -rw------- 1 m m   625457 Aug 20 03:25 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log
[2023-08-20 03:26:06] -rw------- 1 m m   182713 Aug 20 03:23 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log.tgz
[2023-08-20 03:26:06] -rw-r--r-- 2 m m 37620382 Aug 20 02:59 EVNT.04972714._000038.pool.root.1
[2023-08-20 03:26:06] drwxrwx--- 2 m m     4096 Aug 20 03:25 PanDA_Pilot-5936746714/
[2023-08-20 03:26:06] -rw------- 1 m m  1018389 Aug 20 03:01 agis_schedconf.cvmfs.json
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m        0 Aug 20 02:59 boinc_lockfile
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     8192 Aug 20 03:25 boinc_mmap_file
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      533 Aug 20 03:20 boinc_task_state.xml
[2023-08-20 03:26:06] -rw------- 1 m m  1385582 Aug 20 03:01 cric_ddmendpoints.json
[2023-08-20 03:26:06] -rw------- 1 m m     7386 Aug 20 03:25 heartbeat.json
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     5728 Aug 20 02:59 init_data.xml
[2023-08-20 03:26:06] -rw-r--r-- 2 m m   927504 Aug 20 02:59 input.tar.gz
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      112 Aug 20 02:59 job.xml
[2023-08-20 03:26:06] -rw------- 1 m m     1018 Aug 20 03:19 memory_monitor_summary.json
[2023-08-20 03:26:06] -rw------- 1 m m  1859012 Aug 20 03:19 output.1.6046796b-f69c-434a-bc5f-d941b5b1137f_87180.pool.root
[2023-08-20 03:26:06] -rw------- 1 m m      464 Aug 20 03:25 output.list
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     2657 Aug 20 02:59 pandaJob.out
[2023-08-20 03:26:06] drwx------ 5 m m     4096 Aug 20 03:02 pilot3/
[2023-08-20 03:26:06] -rw------- 1 m m   918320 Aug 20 02:58 pilot3.tar.gz
[2023-08-20 03:26:06] -rw------- 1 m m   610212 Aug 20 03:25 pilotlog.txt
[2023-08-20 03:26:06] -rw-r--r-- 1 m m     4388 Aug 20 02:58 queuedata.json
[2023-08-20 03:26:06] -rwxr-xr-x 1 m m     7986 Aug 20 02:59 run_atlas*
[2023-08-20 03:26:06] -rwx------ 1 m m    27275 Aug 20 02:58 runpilot2-wrapper.sh*
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      407 Aug 20 02:59 runtime_log
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     7699 Aug 20 02:59 runtime_log.err
[2023-08-20 03:26:06] -rw------- 1 m m      424 Aug 20 02:59 setup.sh.local
[2023-08-20 03:26:06] drwxrwx--x 2 m m     4096 Aug 20 02:59 shared/
[2023-08-20 03:26:06] -rw-r--r-- 2 m m    17632 Aug 20 02:59 start_atlas.sh
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     1715 Aug 20 02:59 stderr.txt
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      107 Aug 20 02:59 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m       25 Aug 20 03:25 wrapper_checkpoint.txt
[2023-08-20 03:26:06] -rw------- 1 m m      129 Aug 20 02:59 xL6MDmvsmr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDcPKDmUw4a4n.diag
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,178 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-08-20 03:26:06] 2023-08-20 02:25:45,179 | INFO     | pilot.control.job                | has_job_completed         | job 5936746714 has completed (purged errors)
[2023-08-20 03:26:06] 2023-08-20 02:25:45,180 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-08-20 03:26:06] 2023-08-20 02:25:45,180 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-08-20 03:26:06] 2023-08-20 02:25:45,193 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /home/m/BOINC/slots/1/PanDA_Pilot-5936746714
[2023-08-20 03:26:06] 2023-08-20 02:25:46,196 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [14275]
[2023-08-20 03:26:06] 2023-08-20 02:25:46,196 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector trying to kill pid 14275
[2023-08-20 03:26:06] 2023-08-20 02:25:46,196 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-20 03:26:06] 2023-08-20 02:25:47,201 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-08-20 03:26:06] 2023-08-20 02:25:47,202 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=14275
[2023-08-20 03:26:06] 2023-08-20 02:25:47,239 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [14275] (in reverse order)
[2023-08-20 03:26:06] 2023-08-20 02:25:47,269 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-08-20 03:26:06] 2023-08-20 02:25:47,269 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | WARNING  | pilot.util.processes             | kill_processes            | exception caught: [Errno 22] Invalid argument: '/proc/1/cmdline'
[2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-08-20 03:26:06] 2023-08-20 02:25:47,270 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.6.5.19  ***
[2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-08-20 03:26:06] 2023-08-20 02:25:47,271 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-08-20 03:26:06] 2023-08-20 02:25:47,288 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-08-20 03:26:06] 2023-08-20 02:25:47,289 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2023-08-20 03:26:06] 2023-08-20 02:25:47,300 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2023-08-20 03:26:06] NAME="CentOS Linux"
[2023-08-20 03:26:06] VERSION="7 (Core)"
[2023-08-20 03:26:06] ID="centos"
[2023-08-20 03:26:06] ID_LIKE="rhel fedora"
[2023-08-20 03:26:06] VERSION_ID="7"
[2023-08-20 03:26:06] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-20 03:26:06] ANSI_COLOR="0;31"
[2023-08-20 03:26:06] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-20 03:26:06] HOME_URL="https://www.centos.org/"
[2023-08-20 03:26:06] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-20 03:26:06] 
[2023-08-20 03:26:06] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-20 03:26:06] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-20 03:26:06] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-20 03:26:06] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-20 03:26:06] 
[2023-08-20 03:26:06] 2023-08-20 02:25:47,301 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-08-20 03:26:06] 2023-08-20 02:25:47,803 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /home/m/BOINC/slots/1
[2023-08-20 03:26:06] 2023-08-20 02:25:47,804 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /home/m/BOINC/slots/1
[2023-08-20 03:26:06] 2023-08-20 02:25:47,816 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2023-08-20 03:26:06] /dev/sda1              455417 28176    404085       7% /home/m/BOINC/slots/1
[2023-08-20 03:26:06] 2023-08-20 02:25:47,816 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (423713832960 B)
[2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING  | pilot.control.job                | retrieve                  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | WARNING  | pilot.control.monitor            | control                   | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | INFO     | pilot.control.job                | job_monitor               | aborting loop
[2023-08-20 03:26:06] 2023-08-20 02:25:47,817 | INFO     | pilot.util.queuehandling         | abort_jobs_in_queues      | found 0 job(s) in 20 queues
[2023-08-20 03:26:06] 2023-08-20 02:25:47,818 | WARNING  | pilot.control.monitor            | run_checks                | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-20 03:26:06] 2023-08-20 02:25:47,818 | WARNING  | pilot.control.monitor            | run_checks                | will wait for a maximum of 300 s for threads to finish
[2023-08-20 03:26:06] 2023-08-20 02:25:48,389 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-08-20 03:26:06] 2023-08-20 02:25:48,647 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-20 03:26:06] 2023-08-20 02:25:48,735 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-08-20 03:26:06] 2023-08-20 02:25:48,822 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:48,823 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:48,856 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-08-20 03:26:06] 2023-08-20 02:25:49,309 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,395 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,452 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,471 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,572 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,572 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,635 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-20 03:26:06] 2023-08-20 02:25:49,732 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,740 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,861 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:49,907 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:50,164 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-20 03:26:06] 2023-08-20 02:25:50,652 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:51,170 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:53,641 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:25:58,563 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-08-20 03:26:06] 2023-08-20 02:25:58,563 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-08-20 03:26:06] 2023-08-20 02:25:58,563 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-08-20 03:26:06] 2023-08-20 02:25:59,569 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-08-20 03:26:06] 2023-08-20 02:26:01,250 | INFO     | pilot.util.processes             | threads_aborted           | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139757
[2023-08-20 03:26:06] 2023-08-20 02:26:01,250 | DEBUG    | pilot.workflow.generic           | run                       | will proceed to set job_aborted
[2023-08-20 03:26:06] 2023-08-20 02:26:01,872 | WARNING  | pilot.control.monitor            | run_checks                | job_aborted has been set - aborting pilot monitoring
[2023-08-20 03:26:06] 2023-08-20 02:26:01,872 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | DEBUG    | root                             | <module>                  | trace=<class 'pilot.workflow.generic.traces'>
[2023-08-20 03:26:06] 2023-08-20 02:26:06,272 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-08-20 03:26:06] 2023-08-20 02:26:06,273 | INFO     | root                             | wrap_up                   | pilot has finished (exit code=0, shell exit code=0)
[2023-08-20 03:26:06] 2023-08-20 02:26:06,322 [wrapper] ==== pilot stdout END ====
[2023-08-20 03:26:06] 2023-08-20 02:26:06,325 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-20 03:26:06] 2023-08-20 02:26:06,328 [wrapper] pilotpid: 6761
[2023-08-20 03:26:06] 2023-08-20 02:26:06,330 [wrapper] Pilot exit status: 0
[2023-08-20 03:26:06] 2023-08-20 02:26:06,340 [wrapper] pandaids: 5936746714
[2023-08-20 03:26:06] 2023-08-20 02:26:06,347 [wrapper] apfmon messages muted
[2023-08-20 03:26:06] 2023-08-20 02:26:06,350 [wrapper] Test setup, not cleaning
[2023-08-20 03:26:06] 2023-08-20 02:26:06,353 [wrapper] ==== wrapper stdout END ====
[2023-08-20 03:26:06] 2023-08-20 02:26:06,356 [wrapper] ==== wrapper stderr END ====
[2023-08-20 03:26:06] 2023-08-20 02:26:06,362 [wrapper] wrapperexiting ec=0, duration=1572
[2023-08-20 03:26:06] 2023-08-20 02:26:06,365 [wrapper] apfmon messages muted
[2023-08-20 03:26:06]  *** Error codes and diagnostics ***
[2023-08-20 03:26:06]     "exeErrorCode": 0,
[2023-08-20 03:26:06]     "exeErrorDiag": "",
[2023-08-20 03:26:06]     "pilotErrorCode": 0,
[2023-08-20 03:26:06]     "pilotErrorDiag": "",
[2023-08-20 03:26:06]  *** Listing of results directory ***
[2023-08-20 03:26:06] total 46360
[2023-08-20 03:26:06] -rwx------ 1 m m    27275 Aug 20 02:58 runpilot2-wrapper.sh
[2023-08-20 03:26:06] -rw-r--r-- 1 m m     4388 Aug 20 02:58 queuedata.json
[2023-08-20 03:26:06] -rw------- 1 m m   918320 Aug 20 02:58 pilot3.tar.gz
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      107 Aug 20 02:59 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-20 03:26:06] -rwxr-xr-x 1 m m     7986 Aug 20 02:59 run_atlas
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      112 Aug 20 02:59 job.xml
[2023-08-20 03:26:06] -rw-r--r-- 2 m m    17632 Aug 20 02:59 start_atlas.sh
[2023-08-20 03:26:06] drwxrwx--x 2 m m     4096 Aug 20 02:59 shared
[2023-08-20 03:26:06] -rw-r--r-- 2 m m   927504 Aug 20 02:59 input.tar.gz
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     5728 Aug 20 02:59 init_data.xml
[2023-08-20 03:26:06] -rw-r--r-- 2 m m 37620382 Aug 20 02:59 EVNT.04972714._000038.pool.root.1
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m        0 Aug 20 02:59 boinc_lockfile
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     2657 Aug 20 02:59 pandaJob.out
[2023-08-20 03:26:06] -rw------- 1 m m      424 Aug 20 02:59 setup.sh.local
[2023-08-20 03:26:06] -rw------- 1 m m  1385582 Aug 20 03:01 cric_ddmendpoints.json
[2023-08-20 03:26:06] -rw------- 1 m m  1018389 Aug 20 03:01 agis_schedconf.cvmfs.json
[2023-08-20 03:26:06] drwx------ 5 m m     4096 Aug 20 03:02 pilot3
[2023-08-20 03:26:06] -rw------- 1 m m  1859012 Aug 20 03:19 output.1.6046796b-f69c-434a-bc5f-d941b5b1137f_87180.pool.root
[2023-08-20 03:26:06] -rw------- 1 m m     1018 Aug 20 03:19 memory_monitor_summary.json
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      533 Aug 20 03:20 boinc_task_state.xml
[2023-08-20 03:26:06] -rw------- 1 m m   182713 Aug 20 03:23 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log.tgz
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m       25 Aug 20 03:25 wrapper_checkpoint.txt
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m     8192 Aug 20 03:25 boinc_mmap_file
[2023-08-20 03:26:06] -rw------- 1 m m     7386 Aug 20 03:25 heartbeat.json
[2023-08-20 03:26:06] -rw------- 1 m m     8547 Aug 20 03:26 pilotlog.txt
[2023-08-20 03:26:06] -rw------- 1 m m   641899 Aug 20 03:26 6046796b-f69c-434a-bc5f-d941b5b1137f_87180.1.job.log
[2023-08-20 03:26:06] -rw------- 1 m m      464 Aug 20 03:26 output.list
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m      748 Aug 20 03:26 runtime_log
[2023-08-20 03:26:06] -rw------- 1 m m  2703360 Aug 20 03:26 result.tar.gz
[2023-08-20 03:26:06] -rw------- 1 m m      627 Aug 20 03:26 xL6MDmvsmr3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDcPKDmUw4a4n.diag
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m    11913 Aug 20 03:26 runtime_log.err
[2023-08-20 03:26:06] -rw-rw-r-- 1 m m    28855 Aug 20 03:26 stderr.txt
[2023-08-20 03:26:06] HITS file was successfully produced:
[2023-08-20 03:26:06] -rw------- 1 m m 1859012 Aug 20 03:19 shared/HITS.pool.root.1
[2023-08-20 03:26:06]  *** Contents of shared directory: ***
[2023-08-20 03:26:06] total 42124
[2023-08-20 03:26:06] -rw-r--r-- 2 m m    17632 Aug 20 02:59 start_atlas.sh
[2023-08-20 03:26:06] -rw-r--r-- 2 m m   927504 Aug 20 02:59 input.tar.gz
[2023-08-20 03:26:06] -rw-r--r-- 2 m m 37620382 Aug 20 02:59 ATLAS.root_0
[2023-08-20 03:26:06] -rw------- 1 m m  1859012 Aug 20 03:19 HITS.pool.root.1
[2023-08-20 03:26:06] -rw------- 1 m m  2703360 Aug 20 03:26 result.tar.gz
03:26:08 (3148): run_atlas exited; CPU time 704.943366
03:26:08 (3148): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN