Name | ezOMDmqmbt3n7Olcko1bjSoqABFKDmABFKDm7AsVDm8wPKDmWx4LTm_0 |
Workunit | 2327298 |
Created | 25 Aug 2023, 2:31:34 UTC |
Sent | 25 Aug 2023, 2:33:23 UTC |
Report deadline | 1 Sep 2023, 2:33:23 UTC |
Received | 25 Aug 2023, 2:53:35 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 17 min 52 sec |
CPU time | 3 min 9 sec |
Validate state | Valid |
Credit | 12.62 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.60 GB |
Peak swap size | 3.09 GB |
Peak disk usage | 79.24 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 03:34:29 (19418): wrapper (7.7.26015): starting 03:34:29 (19418): wrapper: running run_atlas (--nthreads 4) [2023-08-25 03:34:29] Arguments: --nthreads 4 [2023-08-25 03:34:29] Threads: 4 [2023-08-25 03:34:29] Checking for CVMFS [2023-08-25 03:34:31] Probing /cvmfs/atlas.cern.ch... OK [2023-08-25 03:34:36] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-25 03:34:36] Running cvmfs_config stat atlas.cern.ch [2023-08-25 03:34:36] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-25 03:34:36] 2.9.0.0 19559 0 24716 122854 3 1 4036877 4194304 0 130560 0 0 0.000 829 452 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-25 03:34:36] CVMFS is ok [2023-08-25 03:34:36] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-25 03:34:36] Checking for apptainer binary... [2023-08-25 03:34:36] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-25 03:34:36] Running /usr/bin/apptainer --version [2023-08-25 03:34:37] apptainer version 1.0.3 [2023-08-25 03:34:37] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-25 03:34:38] TeeC16 [2023-08-25 03:34:38] apptainer works [2023-08-25 03:34:38] Set ATHENA_PROC_NUMBER=4 [2023-08-25 03:34:38] Set ATHENA_CORE_NUMBER=4 [2023-08-25 03:34:38] Starting ATLAS job with PandaID=5941712575 [2023-08-25 03:34:38] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-25 03:52:18] *** The last 200 lines of the pilot log: *** [2023-08-25 03:52:18] 2023-08-25 02:51:22,276 | INFO | pfn file=/home/m/BOINC/slots/2/PanDA_Pilot-5941712575/output.1.e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.pool.root does not exist (skip from workdir size calculat [2023-08-25 03:52:18] 2023-08-25 02:51:22,276 | INFO | total size of present files: 0 B (workdir size: 1079888 B) [2023-08-25 03:52:18] 2023-08-25 02:51:22,276 | INFO | output file size check: skipping output file /home/m/BOINC/slots/2/PanDA_Pilot-5941712575/output.1.e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.pool.root since it do [2023-08-25 03:52:18] 2023-08-25 02:51:22,316 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:22,317 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:23,540 | INFO | 947s have passed since pilot start [2023-08-25 03:52:18] 2023-08-25 02:51:24,820 | INFO | monitor loop #172: job 0:5941712575 is in state 'stageout' [2023-08-25 03:52:18] 2023-08-25 02:51:24,865 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:24,865 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:27,368 | INFO | monitor loop #173: job 0:5941712575 is in state 'stageout' [2023-08-25 03:52:18] 2023-08-25 02:51:27,406 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:27,406 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:29,909 | INFO | monitor loop #174: job 0:5941712575 is in state 'stageout' [2023-08-25 03:52:18] 2023-08-25 02:51:29,954 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:29,954 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:32,457 | INFO | monitor loop #175: job 0:5941712575 is in state 'stageout' [2023-08-25 03:52:18] 2023-08-25 02:51:32,504 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:32,504 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:35,006 | INFO | monitor loop #176: job 0:5941712575 is in state 'stageout' [2023-08-25 03:52:18] 2023-08-25 02:51:35,055 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:35,055 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:37,558 | INFO | monitor loop #177: job 0:5941712575 is in state 'stageout' [2023-08-25 03:52:18] 2023-08-25 02:51:37,599 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:37,599 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:40,102 | INFO | monitor loop #178: job 0:5941712575 is in state 'stageout' [2023-08-25 03:52:18] 2023-08-25 02:51:40,151 | INFO | number of running child processes to parent process 29905: 1 [2023-08-25 03:52:18] 2023-08-25 02:51:40,151 | INFO | maximum number of monitored processes: 5 [2023-08-25 03:52:18] 2023-08-25 02:51:42,135 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-08-25 03:52:18] 2023-08-25 02:51:42,288 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-08-25 03:52:18] 2023-08-25 02:51:42,289 | WARNING | cache file=/home/m/BOINC/slots/2/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/2/agis_ddmendpoints.ag [2023-08-25 03:52:18] 2023-08-25 02:51:42,343 | INFO | transferring file e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.1.job.log.tgz from /home/m/BOINC/slots/2/PanDA_Pilot-5941712575/e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_4 [2023-08-25 03:52:18] 2023-08-25 02:51:42,343 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/2/PanDA_Pilot-5941712575/e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.1.job.log.tgz /home/m/BOINC/slots/2/e154 [2023-08-25 03:52:18] 2023-08-25 02:51:42,360 | INFO | Adding to output.list: e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/1e/20/e1548cc1-9ae7- [2023-08-25 03:52:18] 2023-08-25 02:51:42,360 | INFO | summary of transferred files: [2023-08-25 03:52:18] 2023-08-25 02:51:42,361 | INFO | -- lfn=e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.1.job.log.tgz, status_code=0, status=transferred [2023-08-25 03:52:18] 2023-08-25 02:51:42,361 | INFO | stage-out finished correctly [2023-08-25 03:52:18] 2023-08-25 02:51:42,655 | INFO | monitor loop #179: job 0:5941712575 is in state 'finished' [2023-08-25 03:52:18] 2023-08-25 02:51:42,655 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-25 03:52:18] 2023-08-25 02:51:44,666 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-08-25 03:52:18] 2023-08-25 02:51:45,158 | INFO | monitor loop #180: job 0:5941712575 is in state 'finished' [2023-08-25 03:52:18] 2023-08-25 02:51:45,158 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-25 03:52:18] 2023-08-25 02:51:47,661 | INFO | monitor loop #181: job 0:5941712575 is in state 'finished' [2023-08-25 03:52:18] 2023-08-25 02:51:47,661 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-25 03:52:18] 2023-08-25 02:51:47,684 | INFO | job 5941712575 has state=finished [2023-08-25 03:52:18] 2023-08-25 02:51:47,685 | INFO | preparing for final server update for job 5941712575 in state='finished' [2023-08-25 03:52:18] 2023-08-25 02:51:47,685 | INFO | this job has now completed (state=finished) [2023-08-25 03:52:18] 2023-08-25 02:51:47,685 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-08-25 03:52:18] 2023-08-25 02:51:47,685 | INFO | job 5941712575 has finished - writing final server update [2023-08-25 03:52:18] 2023-08-25 02:51:47,686 | WARNING | wrong length of table data, x=[1692931145.0, 1692931206.0, 1692931267.0, 1692931328.0, 1692931389.0, 1692931450.0, 1692931511.0], y=[2258.0, 775883.0, 832333.0, 94 [2023-08-25 03:52:18] 2023-08-25 02:51:47,687 | INFO | total number of processed events: 2 (read) [2023-08-25 03:52:18] 2023-08-25 02:51:47,704 | INFO | executing command: lscpu [2023-08-25 03:52:18] 2023-08-25 02:51:47,717 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-08-25 03:52:18] 2023-08-25 02:51:47,718 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-08-25 03:52:18] 2023-08-25 02:51:47,738 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-08-25 03:52:18] 2023-08-25 02:51:50,164 | INFO | monitor loop #182: job 0:5941712575 is in state 'finished' [2023-08-25 03:52:18] 2023-08-25 02:51:50,164 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-25 03:52:18] 2023-08-25 02:51:52,668 | INFO | monitor loop #183: job 0:5941712575 is in state 'finished' [2023-08-25 03:52:18] 2023-08-25 02:51:52,668 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-25 03:52:18] 2023-08-25 02:51:55,171 | INFO | monitor loop #184: job 0:5941712575 is in state 'finished' [2023-08-25 03:52:18] 2023-08-25 02:51:55,172 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-25 03:52:18] 2023-08-25 02:51:56,297 | INFO | CPU arch script returned: x86-64-v2 [2023-08-25 03:52:18] 2023-08-25 02:51:56,297 | INFO | using path: /home/m/BOINC/slots/2/PanDA_Pilot-5941712575/memory_monitor_summary.json (trf name=prmon) [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | extracted standard info from prmon json [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | extracted standard memory fields from prmon json [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | .............................. [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | . Timing measurements: [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | . get job = 62 s [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | . initial setup = 75 s [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | . payload setup = 7 s [2023-08-25 03:52:18] 2023-08-25 02:51:56,298 | INFO | . stage-in = 43 s [2023-08-25 03:52:18] 2023-08-25 02:51:56,299 | INFO | . payload execution = 398 s [2023-08-25 03:52:18] 2023-08-25 02:51:56,299 | INFO | . stage-out = 362 s [2023-08-25 03:52:18] 2023-08-25 02:51:56,299 | INFO | .............................. [2023-08-25 03:52:18] 2023-08-25 02:51:56,818 | INFO | [2023-08-25 03:52:18] 2023-08-25 02:51:56,818 | INFO | job summary report [2023-08-25 03:52:18] 2023-08-25 02:51:56,818 | INFO | -------------------------------------------------- [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | PanDA job id: 5941712575 [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | task id: NULL [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | errors: (none) [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | status: LOG_TRANSFER = DONE [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | pilot state: finished [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | transexitcode: 0 [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | exeerrorcode: 0 [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | exeerrordiag: [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | exitcode: 0 [2023-08-25 03:52:18] 2023-08-25 02:51:56,819 | INFO | exitmsg: OK [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | cpuconsumptiontime: 193 s [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | nevents: 2 [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | neventsw: 0 [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | pid: 29905 [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | pgrp: 29905 [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | corecount: 4 [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | event service: False [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | sizes: {0: 2490101, 11: 2490247, 21: 2490275, 32: 2490303, 43: 2490331, 48: 2490419, 53: 2490575, 409: 2511826, 771: 2521134, 773: 2521190, 785: 2521412} [2023-08-25 03:52:18] 2023-08-25 02:51:56,820 | INFO | -------------------------------------------------- [2023-08-25 03:52:18] 2023-08-25 02:51:56,821 | INFO | [2023-08-25 03:52:18] 2023-08-25 02:51:56,821 | INFO | executing command: ls -lF /home/m/BOINC/slots/2 [2023-08-25 03:52:18] 2023-08-25 02:51:56,837 | INFO | queue jobs had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,837 | INFO | queue payloads had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue data_in had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue data_out had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue current_data_in had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,838 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue completed_jobids has 1 job(s) [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,839 | INFO | queue messages had 0 job(s) [purged] [2023-08-25 03:52:18] 2023-08-25 02:51:56,840 | INFO | job 5941712575 has completed (purged errors) [2023-08-25 03:52:18] 2023-08-25 02:51:56,840 | INFO | overall cleanup function is called [2023-08-25 03:52:18] 2023-08-25 02:51:57,847 | INFO | --- collectZombieJob: --- 10, [29905] [2023-08-25 03:52:18] 2023-08-25 02:51:57,847 | INFO | zombie collector trying to kill pid 29905 [2023-08-25 03:52:18] 2023-08-25 02:51:57,847 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-25 03:52:18] 2023-08-25 02:51:58,852 | INFO | collected zombie processes [2023-08-25 03:52:18] 2023-08-25 02:51:58,852 | INFO | will now attempt to kill all subprocesses of pid=29905 [2023-08-25 03:52:18] 2023-08-25 02:51:58,897 | INFO | process IDs to be killed: [29905] (in reverse order) [2023-08-25 03:52:18] 2023-08-25 02:51:58,928 | WARNING | found no corresponding commands to process id(s) [2023-08-25 03:52:18] 2023-08-25 02:51:58,929 | INFO | Do not look for orphan processes in BOINC jobs [2023-08-25 03:52:18] 2023-08-25 02:51:58,929 | INFO | ready for new job [2023-08-25 03:52:18] 2023-08-25 02:51:58,929 | INFO | pilot has finished with previous job - re-establishing logging [2023-08-25 03:52:18] 2023-08-25 02:51:58,929 | INFO | ************************************* [2023-08-25 03:52:18] 2023-08-25 02:51:58,930 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-08-25 03:52:18] 2023-08-25 02:51:58,930 | INFO | ************************************* [2023-08-25 03:52:18] 2023-08-25 02:51:58,930 | INFO | [2023-08-25 03:52:18] 2023-08-25 02:51:58,948 | INFO | architecture information: [2023-08-25 03:52:18] 2023-08-25 02:51:58,948 | INFO | executing command: cat /etc/os-release [2023-08-25 03:52:18] 2023-08-25 02:51:58,962 | INFO | cat /etc/os-release: [2023-08-25 03:52:18] NAME="CentOS Linux" [2023-08-25 03:52:18] VERSION="7 (Core)" [2023-08-25 03:52:18] ID="centos" [2023-08-25 03:52:18] ID_LIKE="rhel fedora" [2023-08-25 03:52:18] VERSION_ID="7" [2023-08-25 03:52:18] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-25 03:52:18] ANSI_COLOR="0;31" [2023-08-25 03:52:18] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-25 03:52:18] HOME_URL="https://www.centos.org/" [2023-08-25 03:52:18] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-25 03:52:18] [2023-08-25 03:52:18] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-25 03:52:18] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-25 03:52:18] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-25 03:52:18] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-25 03:52:18] [2023-08-25 03:52:18] 2023-08-25 02:51:58,963 | INFO | ************************************* [2023-08-25 03:52:18] 2023-08-25 02:51:59,466 | INFO | executing command: df -mP /home/m/BOINC/slots/2 [2023-08-25 03:52:18] 2023-08-25 02:51:59,478 | INFO | sufficient remaining disk space (422878117888 B) [2023-08-25 03:52:18] 2023-08-25 02:51:59,478 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-25 03:52:18] 2023-08-25 02:51:59,478 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-25 03:52:18] 2023-08-25 02:51:59,478 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-08-25 03:52:18] 2023-08-25 02:51:59,478 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-08-25 03:52:18] 2023-08-25 02:51:59,478 | INFO | found 0 job(s) in 20 queues [2023-08-25 03:52:18] 2023-08-25 02:51:59,478 | INFO | aborting loop [2023-08-25 03:52:18] 2023-08-25 02:51:59,479 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-08-25 03:52:18] 2023-08-25 02:51:59,479 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-08-25 03:52:18] 2023-08-25 02:51:59,771 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-25 03:52:18] 2023-08-25 02:52:00,479 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-08-25 03:52:18] 2023-08-25 02:52:00,480 | INFO | [job] retrieve thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:00,484 | INFO | [job] job monitor thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:00,563 | INFO | [data] control thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,053 | INFO | [payload] validate_post thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,130 | INFO | [job] validate thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,144 | INFO | [payload] control thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,201 | INFO | [payload] execute_payloads thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,317 | INFO | [job] create_data_payload thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,369 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-25 03:52:18] 2023-08-25 02:52:01,472 | INFO | [payload] validate_pre thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,544 | INFO | [job] control thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:01,552 | INFO | [data] copytool_in thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:02,082 | INFO | [payload] failed_post thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:02,375 | INFO | [job] queue monitor thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:02,484 | INFO | [data] copytool_out thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:03,776 | INFO | [data] queue_monitor thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:09,891 | INFO | job.realtimelogging is not enabled [2023-08-25 03:52:18] 2023-08-25 02:52:10,896 | INFO | [payload] run_realtimelog thread has finished [2023-08-25 03:52:18] 2023-08-25 02:52:12,975 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140514057242432)>', '<ExcThread(monitor, started 140513629935360)>'] [2023-08-25 03:52:18] 2023-08-25 02:52:13,535 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-08-25 03:52:18] 2023-08-25 02:52:13,535 | INFO | [monitor] control thread has ended [2023-08-25 03:52:18] 2023-08-25 02:52:18,000 | INFO | end of generic workflow (traces error code: 0) [2023-08-25 03:52:18] 2023-08-25 02:52:18,001 | INFO | traces error code: 0 [2023-08-25 03:52:18] 2023-08-25 02:52:18,001 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-08-25 03:52:18] 2023-08-25 02:52:18,049 [wrapper] ==== pilot stdout END ==== [2023-08-25 03:52:18] 2023-08-25 02:52:18,053 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-25 03:52:18] 2023-08-25 02:52:18,056 [wrapper] pilotpid: 23122 [2023-08-25 03:52:18] 2023-08-25 02:52:18,060 [wrapper] Pilot exit status: 0 [2023-08-25 03:52:18] 2023-08-25 02:52:18,073 [wrapper] pandaids: 5941712575 [2023-08-25 03:52:18] 2023-08-25 02:52:18,079 [wrapper] apfmon messages muted [2023-08-25 03:52:18] 2023-08-25 02:52:18,083 [wrapper] Test setup, not cleaning [2023-08-25 03:52:18] 2023-08-25 02:52:18,086 [wrapper] ==== wrapper stdout END ==== [2023-08-25 03:52:18] 2023-08-25 02:52:18,089 [wrapper] ==== wrapper stderr END ==== [2023-08-25 03:52:18] 2023-08-25 02:52:18,097 [wrapper] wrapperexiting ec=0, duration=1059 [2023-08-25 03:52:18] 2023-08-25 02:52:18,100 [wrapper] apfmon messages muted [2023-08-25 03:52:18] *** Error codes and diagnostics *** [2023-08-25 03:52:18] "exeErrorCode": 0, [2023-08-25 03:52:18] "exeErrorDiag": "", [2023-08-25 03:52:18] "pilotErrorCode": 0, [2023-08-25 03:52:18] "pilotErrorDiag": "", [2023-08-25 03:52:18] *** Listing of results directory *** [2023-08-25 03:52:18] total 43536 [2023-08-25 03:52:18] -rw-r--r-- 1 m m 418016 Aug 25 02:35 pilot3.tar.gz [2023-08-25 03:52:18] -rwx------ 1 m m 27277 Aug 25 03:31 runpilot2-wrapper.sh [2023-08-25 03:52:18] -rw-r--r-- 1 m m 4388 Aug 25 03:31 queuedata.json [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 107 Aug 25 03:34 wrapper_26015_x86_64-pc-linux-gnu [2023-08-25 03:52:18] -rwxr-xr-x 1 m m 7986 Aug 25 03:34 run_atlas [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 112 Aug 25 03:34 job.xml [2023-08-25 03:52:18] -rw-r--r-- 2 m m 37960264 Aug 25 03:34 EVNT.04972714._000040.pool.root.1 [2023-08-25 03:52:18] -rw-r--r-- 2 m m 17604 Aug 25 03:34 start_atlas.sh [2023-08-25 03:52:18] drwxrwx--x 2 m m 4096 Aug 25 03:34 shared [2023-08-25 03:52:18] -rw-r--r-- 2 m m 428808 Aug 25 03:34 input.tar.gz [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 5747 Aug 25 03:34 init_data.xml [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 0 Aug 25 03:34 boinc_lockfile [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 2682 Aug 25 03:34 pandaJob.out [2023-08-25 03:52:18] -rw------- 1 m m 424 Aug 25 03:34 setup.sh.local [2023-08-25 03:52:18] -rw------- 1 m m 1390000 Aug 25 03:36 cric_ddmendpoints.json [2023-08-25 03:52:18] -rw------- 1 m m 1021963 Aug 25 03:36 agis_schedconf.cvmfs.json [2023-08-25 03:52:18] drwx------ 4 m m 4096 Aug 25 03:37 pilot3 [2023-08-25 03:52:18] -rw------- 1 m m 1238567 Aug 25 03:45 output.1.e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.pool.root [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 532 Aug 25 03:45 boinc_task_state.xml [2023-08-25 03:52:18] -rw------- 1 m m 1016 Aug 25 03:45 memory_monitor_summary.json [2023-08-25 03:52:18] -rw------- 1 m m 174367 Aug 25 03:48 e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.1.job.log.tgz [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 8192 Aug 25 03:51 boinc_mmap_file [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 25 Aug 25 03:51 wrapper_checkpoint.txt [2023-08-25 03:52:18] -rw------- 1 m m 7063 Aug 25 03:51 heartbeat.json [2023-08-25 03:52:18] -rw------- 1 m m 4092 Aug 25 03:52 pilotlog.txt [2023-08-25 03:52:18] -rw------- 1 m m 157794 Aug 25 03:52 e1548cc1-9ae7-43e2-83aa-ee1ccc66b697_41354.1.job.log [2023-08-25 03:52:18] -rw------- 1 m m 464 Aug 25 03:52 output.list [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 748 Aug 25 03:52 runtime_log [2023-08-25 03:52:18] -rw------- 1 m m 1587200 Aug 25 03:52 result.tar.gz [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 11905 Aug 25 03:52 runtime_log.err [2023-08-25 03:52:18] -rw------- 1 m m 627 Aug 25 03:52 ezOMDmqmbt3n7Olcko1bjSoqABFKDmABFKDm7AsVDm8wPKDmWx4LTm.diag [2023-08-25 03:52:18] -rw-rw-r-- 1 m m 22861 Aug 25 03:52 stderr.txt [2023-08-25 03:52:18] HITS file was successfully produced: [2023-08-25 03:52:18] -rw------- 1 m m 1238567 Aug 25 03:45 shared/HITS.pool.root.1 [2023-08-25 03:52:18] *** Contents of shared directory: *** [2023-08-25 03:52:18] total 40276 [2023-08-25 03:52:18] -rw-r--r-- 2 m m 37960264 Aug 25 03:34 ATLAS.root_0 [2023-08-25 03:52:18] -rw-r--r-- 2 m m 17604 Aug 25 03:34 start_atlas.sh [2023-08-25 03:52:18] -rw-r--r-- 2 m m 428808 Aug 25 03:34 input.tar.gz [2023-08-25 03:52:18] -rw------- 1 m m 1238567 Aug 25 03:45 HITS.pool.root.1 [2023-08-25 03:52:18] -rw------- 1 m m 1587200 Aug 25 03:52 result.tar.gz 03:52:19 (19418): run_atlas exited; CPU time 189.824356 03:52:19 (19418): called boinc_finish(0) </stderr_txt> ]]>
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