Name As5NDmejIu3n7Olcko1bjSoqABFKDmABFKDm7AsVDmw4PKDmdSGtan_0
Workunit 2327697
Created 27 Aug 2023, 0:23:04 UTC
Sent 27 Aug 2023, 0:25:09 UTC
Report deadline 3 Sep 2023, 0:25:09 UTC
Received 27 Aug 2023, 0:50:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 1498
Run time 23 min 40 sec
CPU time 8 min 15 sec
Validate state Valid
Credit 16.81
Device peak FLOPS 13.05 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.50 GB
Peak swap size 2.12 GB
Peak disk usage 79.67 MB

Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:26:19 (2646): wrapper (7.7.26015): starting
01:26:19 (2646): wrapper: running run_atlas (--nthreads 4)
[2023-08-27 01:26:19] Arguments: --nthreads 4
[2023-08-27 01:26:19] Threads: 4
[2023-08-27 01:26:19] Checking for CVMFS
[2023-08-27 01:26:23] Probing /cvmfs/atlas.cern.ch... OK
[2023-08-27 01:26:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-08-27 01:26:28] Running cvmfs_config stat atlas.cern.ch
[2023-08-27 01:26:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-08-27 01:26:28] 2.9.0.0 2868 0 24916 122924 3 1 3970303 4194304 0 130560 0 0 0.000 829 543 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-08-27 01:26:28] CVMFS is ok
[2023-08-27 01:26:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-08-27 01:26:28] Checking for apptainer binary...
[2023-08-27 01:26:28] Using apptainer found in PATH at /usr/bin/apptainer
[2023-08-27 01:26:28] Running /usr/bin/apptainer --version
[2023-08-27 01:26:29] apptainer version 1.0.3
[2023-08-27 01:26:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-08-27 01:26:30] TeeC16
[2023-08-27 01:26:30] apptainer works
[2023-08-27 01:26:30] Set ATHENA_PROC_NUMBER=4
[2023-08-27 01:26:30] Set ATHENA_CORE_NUMBER=4
[2023-08-27 01:26:30] Starting ATLAS job with PandaID=5944093575
[2023-08-27 01:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-08-27 01:49:56]  *** The last 200 lines of the pilot log: ***
[2023-08-27 01:49:56] 2023-08-27 00:48:59,138 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:48:59,139 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:01,642 | INFO     | monitor loop #204: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:01,683 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:01,683 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:04,186 | INFO     | monitor loop #205: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:04,224 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:04,225 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:06,728 | INFO     | monitor loop #206: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:06,766 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:06,766 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:09,269 | INFO     | monitor loop #207: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:09,309 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:09,309 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:11,812 | INFO     | monitor loop #208: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:11,856 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:11,856 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:14,359 | INFO     | monitor loop #209: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:14,399 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:14,399 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:16,902 | INFO     | monitor loop #210: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:16,944 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:16,944 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:19,447 | INFO     | monitor loop #211: job 0:5944093575 is in state 'stageout'
[2023-08-27 01:49:56] 2023-08-27 00:49:19,490 | INFO     | number of running child processes to parent process 13825: 1
[2023-08-27 01:49:56] 2023-08-27 00:49:19,491 | INFO     | maximum number of monitored processes: 5
[2023-08-27 01:49:56] 2023-08-27 00:49:19,913 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-08-27 01:49:56] 2023-08-27 00:49:20,075 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-08-27 01:49:56] 2023-08-27 00:49:20,075 | WARNING  | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag
[2023-08-27 01:49:56] 2023-08-27 00:49:20,124 | INFO     | transferring file 750dabc7-f1a4-4663-a7d0-038a1e28eefe_37331.1.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-5944093575/750dabc7-f1a4-4663-a7d0-038a1e28eefe_3
[2023-08-27 01:49:56] 2023-08-27 00:49:20,124 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-5944093575/750dabc7-f1a4-4663-a7d0-038a1e28eefe_37331.1.job.log.tgz /home/m/BOINC/slots/0/750d
[2023-08-27 01:49:56] 2023-08-27 00:49:20,143 | INFO     | Adding to output.list: 750dabc7-f1a4-4663-a7d0-038a1e28eefe_37331.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/32/b8/750dabc7-f1a4-
[2023-08-27 01:49:56] 2023-08-27 00:49:20,144 | INFO     | summary of transferred files:
[2023-08-27 01:49:56] 2023-08-27 00:49:20,144 | INFO     |  -- lfn=750dabc7-f1a4-4663-a7d0-038a1e28eefe_37331.1.job.log.tgz, status_code=0, status=transferred
[2023-08-27 01:49:56] 2023-08-27 00:49:20,145 | INFO     | stage-out finished correctly
[2023-08-27 01:49:56] 2023-08-27 00:49:21,994 | INFO     | monitor loop #212: job 0:5944093575 is in state 'finished'
[2023-08-27 01:49:56] 2023-08-27 00:49:21,994 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-27 01:49:56] 2023-08-27 00:49:23,363 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-08-27 01:49:56] 2023-08-27 00:49:24,497 | INFO     | monitor loop #213: job 0:5944093575 is in state 'finished'
[2023-08-27 01:49:56] 2023-08-27 00:49:24,498 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-27 01:49:56] 2023-08-27 00:49:25,633 | INFO     | job 5944093575 has state=finished
[2023-08-27 01:49:56] 2023-08-27 00:49:25,633 | INFO     | preparing for final server update for job 5944093575 in state='finished'
[2023-08-27 01:49:56] 2023-08-27 00:49:25,634 | INFO     | this job has now completed (state=finished)
[2023-08-27 01:49:56] 2023-08-27 00:49:25,634 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-08-27 01:49:56] 2023-08-27 00:49:25,634 | INFO     | job 5944093575 has finished - writing final server update
[2023-08-27 01:49:56] 2023-08-27 00:49:25,635 | WARNING  | wrong length of table data, x=[1693096584.0, 1693096645.0, 1693096706.0, 1693096767.0, 1693096828.0], y=[1238036.0, 1645722.0, 1649968.0, 1657208.0, 1662326.0] (mu
[2023-08-27 01:49:56] 2023-08-27 00:49:25,636 | INFO     | total number of processed events: 2 (read)
[2023-08-27 01:49:56] 2023-08-27 00:49:25,656 | INFO     | executing command: lscpu
[2023-08-27 01:49:56] 2023-08-27 00:49:25,674 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-08-27 01:49:56] 2023-08-27 00:49:25,675 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-08-27 01:49:56] 2023-08-27 00:49:25,705 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-08-27 01:49:56] 2023-08-27 00:49:27,001 | INFO     | monitor loop #214: job 0:5944093575 is in state 'finished'
[2023-08-27 01:49:56] 2023-08-27 00:49:27,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-27 01:49:56] 2023-08-27 00:49:29,505 | INFO     | monitor loop #215: job 0:5944093575 is in state 'finished'
[2023-08-27 01:49:56] 2023-08-27 00:49:29,505 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-27 01:49:56] 2023-08-27 00:49:29,991 | INFO     | 1318s have passed since pilot start
[2023-08-27 01:49:56] 2023-08-27 00:49:32,007 | INFO     | monitor loop #216: job 0:5944093575 is in state 'finished'
[2023-08-27 01:49:56] 2023-08-27 00:49:32,008 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-27 01:49:56] 2023-08-27 00:49:34,504 | INFO     | CPU arch script returned: x86-64-v2
[2023-08-27 01:49:56] 2023-08-27 00:49:34,504 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5944093575/memory_monitor_summary.json (trf name=prmon)
[2023-08-27 01:49:56] 2023-08-27 00:49:34,511 | INFO     | monitor loop #217: job 0:5944093575 is in state 'finished'
[2023-08-27 01:49:56] 2023-08-27 00:49:34,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-08-27 01:49:56] 2023-08-27 00:49:34,519 | INFO     | extracted standard info from prmon json
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | extracted standard memory fields from prmon json
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | ..............................
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | . Timing measurements:
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | . get job = 56 s
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | . initial setup = 84 s
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | . payload setup = 11 s
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | . stage-in = 53 s
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | . payload execution = 708 s
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | . stage-out = 374 s
[2023-08-27 01:49:56] 2023-08-27 00:49:34,520 | INFO     | ..............................
[2023-08-27 01:49:56] 2023-08-27 00:49:34,582 | INFO     | 
[2023-08-27 01:49:56] 2023-08-27 00:49:34,582 | INFO     | job summary report
[2023-08-27 01:49:56] 2023-08-27 00:49:34,582 | INFO     | --------------------------------------------------
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | PanDA job id: 5944093575
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | task id: NULL
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | errors: (none)
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | status: LOG_TRANSFER = DONE 
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | pilot state: finished 
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | transexitcode: 0
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | exeerrorcode: 0
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | exeerrordiag: 
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | exitcode: 0
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | exitmsg: OK
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | cpuconsumptiontime: 504 s
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | nevents: 2
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | neventsw: 0
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | pid: 13825
[2023-08-27 01:49:56] 2023-08-27 00:49:34,583 | INFO     | pgrp: 13825
[2023-08-27 01:49:56] 2023-08-27 00:49:34,584 | INFO     | corecount: 4
[2023-08-27 01:49:56] 2023-08-27 00:49:34,584 | INFO     | event service: False
[2023-08-27 01:49:56] 2023-08-27 00:49:34,584 | INFO     | sizes: {0: 2490267, 11: 2490413, 21: 2490441, 32: 2490469, 43: 2490497, 53: 2490525, 58: 2490741, 64: 2490769, 723: 2510514, 1098: 2519822, 1102: 2519878, 1113: 25
[2023-08-27 01:49:56] 2023-08-27 00:49:34,584 | INFO     | --------------------------------------------------
[2023-08-27 01:49:56] 2023-08-27 00:49:34,584 | INFO     | 
[2023-08-27 01:49:56] 2023-08-27 00:49:34,584 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2023-08-27 01:49:56] 2023-08-27 00:49:34,599 | INFO     | queue jobs had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,599 | INFO     | queue payloads had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,599 | INFO     | queue data_in had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,599 | INFO     | queue data_out had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,599 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,600 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,601 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,601 | INFO     | queue completed_jobids has 1 job(s)
[2023-08-27 01:49:56] 2023-08-27 00:49:34,601 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,601 | INFO     | queue messages had 0 job(s) [purged]
[2023-08-27 01:49:56] 2023-08-27 00:49:34,601 | INFO     | job 5944093575 has completed (purged errors)
[2023-08-27 01:49:56] 2023-08-27 00:49:34,601 | INFO     | overall cleanup function is called
[2023-08-27 01:49:56] 2023-08-27 00:49:35,608 | INFO     | --- collectZombieJob: --- 10, [13825]
[2023-08-27 01:49:56] 2023-08-27 00:49:35,608 | INFO     | zombie collector trying to kill pid 13825
[2023-08-27 01:49:56] 2023-08-27 00:49:35,608 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-08-27 01:49:56] 2023-08-27 00:49:36,613 | INFO     | collected zombie processes
[2023-08-27 01:49:56] 2023-08-27 00:49:36,613 | INFO     | will now attempt to kill all subprocesses of pid=13825
[2023-08-27 01:49:56] 2023-08-27 00:49:36,661 | INFO     | process IDs to be killed: [13825] (in reverse order)
[2023-08-27 01:49:56] 2023-08-27 00:49:36,698 | WARNING  | found no corresponding commands to process id(s)
[2023-08-27 01:49:56] 2023-08-27 00:49:36,698 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-08-27 01:49:56] 2023-08-27 00:49:36,698 | INFO     | ready for new job
[2023-08-27 01:49:56] 2023-08-27 00:49:36,698 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-08-27 01:49:56] 2023-08-27 00:49:36,699 | INFO     | *************************************
[2023-08-27 01:49:56] 2023-08-27 00:49:36,699 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-08-27 01:49:56] 2023-08-27 00:49:36,699 | INFO     | *************************************
[2023-08-27 01:49:56] 2023-08-27 00:49:36,699 | INFO     | 
[2023-08-27 01:49:56] 2023-08-27 00:49:36,719 | INFO     | architecture information:
[2023-08-27 01:49:56] 2023-08-27 00:49:36,720 | INFO     | executing command: cat /etc/os-release
[2023-08-27 01:49:56] 2023-08-27 00:49:36,736 | INFO     | cat /etc/os-release:
[2023-08-27 01:49:56] NAME="CentOS Linux"
[2023-08-27 01:49:56] VERSION="7 (Core)"
[2023-08-27 01:49:56] ID="centos"
[2023-08-27 01:49:56] ID_LIKE="rhel fedora"
[2023-08-27 01:49:56] VERSION_ID="7"
[2023-08-27 01:49:56] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-08-27 01:49:56] ANSI_COLOR="0;31"
[2023-08-27 01:49:56] CPE_NAME="cpe:/o:centos:centos:7"
[2023-08-27 01:49:56] HOME_URL="https://www.centos.org/"
[2023-08-27 01:49:56] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-08-27 01:49:56] 
[2023-08-27 01:49:56] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-08-27 01:49:56] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-08-27 01:49:56] REDHAT_SUPPORT_PRODUCT="centos"
[2023-08-27 01:49:56] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-08-27 01:49:56] 
[2023-08-27 01:49:56] 2023-08-27 00:49:36,737 | INFO     | *************************************
[2023-08-27 01:49:56] 2023-08-27 00:49:37,240 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2023-08-27 01:49:56] 2023-08-27 00:49:37,258 | INFO     | sufficient remaining disk space (422946275328 B)
[2023-08-27 01:49:56] 2023-08-27 00:49:37,259 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-08-27 01:49:56] 2023-08-27 00:49:37,259 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-08-27 01:49:56] 2023-08-27 00:49:37,259 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-08-27 01:49:56] 2023-08-27 00:49:37,260 | INFO     | found 0 job(s) in 20 queues
[2023-08-27 01:49:56] 2023-08-27 00:49:37,260 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-08-27 01:49:56] 2023-08-27 00:49:37,260 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-08-27 01:49:56] 2023-08-27 00:49:38,027 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-08-27 01:49:56] 2023-08-27 00:49:38,027 | INFO     | aborting loop
[2023-08-27 01:49:56] 2023-08-27 00:49:38,229 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-08-27 01:49:56] 2023-08-27 00:49:38,265 | INFO     | [job] retrieve thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:38,437 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-08-27 01:49:56] 2023-08-27 00:49:38,491 | INFO     | [data] control thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:38,784 | INFO     | [job] validate thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:38,803 | INFO     | [data] copytool_in thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:38,869 | INFO     | [payload] validate_post thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:39,012 | INFO     | [job] create_data_payload thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:39,032 | INFO     | [job] job monitor thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:39,101 | INFO     | [payload] validate_pre thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:39,357 | INFO     | [payload] control thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:39,459 | INFO     | [payload] failed_post thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:39,593 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-08-27 01:49:56] 2023-08-27 00:49:39,696 | INFO     | [job] control thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:39,716 | INFO     | [payload] execute_payloads thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:40,234 | INFO     | [data] copytool_out thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:40,598 | INFO     | [job] queue monitor thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:42,443 | INFO     | [data] queue_monitor thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:48,261 | INFO     | job.realtimelogging is not enabled
[2023-08-27 01:49:56] 2023-08-27 00:49:49,266 | INFO     | [payload] run_realtimelog thread has finished
[2023-08-27 01:49:56] 2023-08-27 00:49:51,354 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139831931365184)>', '<ExcThread(monitor, started 139831359293184)>']
[2023-08-27 01:49:56] 2023-08-27 00:49:52,332 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-08-27 01:49:56] 2023-08-27 00:49:52,333 | INFO     | [monitor] control thread has ended
[2023-08-27 01:49:56] 2023-08-27 00:49:56,379 | INFO     | end of generic workflow (traces error code: 0)
[2023-08-27 01:49:56] 2023-08-27 00:49:56,380 | INFO     | traces error code: 0
[2023-08-27 01:49:56] 2023-08-27 00:49:56,380 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-08-27 01:49:56] 2023-08-27 00:49:56,430 [wrapper] ==== pilot stdout END ====
[2023-08-27 01:49:56] 2023-08-27 00:49:56,433 [wrapper] ==== wrapper stdout RESUME ====
[2023-08-27 01:49:56] 2023-08-27 00:49:56,438 [wrapper] pilotpid: 6425
[2023-08-27 01:49:56] 2023-08-27 00:49:56,441 [wrapper] Pilot exit status: 0
[2023-08-27 01:49:56] 2023-08-27 00:49:56,453 [wrapper] pandaids: 5944093575
[2023-08-27 01:49:56] 2023-08-27 00:49:56,461 [wrapper] apfmon messages muted
[2023-08-27 01:49:56] 2023-08-27 00:49:56,465 [wrapper] Test setup, not cleaning
[2023-08-27 01:49:56] 2023-08-27 00:49:56,468 [wrapper] ==== wrapper stdout END ====
[2023-08-27 01:49:56] 2023-08-27 00:49:56,473 [wrapper] ==== wrapper stderr END ====
[2023-08-27 01:49:56] 2023-08-27 00:49:56,482 [wrapper] wrapperexiting ec=0, duration=1406
[2023-08-27 01:49:56] 2023-08-27 00:49:56,486 [wrapper] apfmon messages muted
[2023-08-27 01:49:56]  *** Error codes and diagnostics ***
[2023-08-27 01:49:56]     "exeErrorCode": 0,
[2023-08-27 01:49:56]     "exeErrorDiag": "",
[2023-08-27 01:49:56]     "pilotErrorCode": 0,
[2023-08-27 01:49:56]     "pilotErrorDiag": "",
[2023-08-27 01:49:56]  *** Listing of results directory ***
[2023-08-27 01:49:56] total 43400
[2023-08-27 01:49:56] -rw-r--r-- 1 m m   418016 Aug 27 00:24 pilot3.tar.gz
[2023-08-27 01:49:56] -rw-r--r-- 1 m m     4388 Aug 27 01:21 queuedata.json
[2023-08-27 01:49:56] -rwx------ 1 m m    27277 Aug 27 01:23 runpilot2-wrapper.sh
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m      107 Aug 27 01:26 wrapper_26015_x86_64-pc-linux-gnu
[2023-08-27 01:49:56] -rwxr-xr-x 1 m m     7986 Aug 27 01:26 run_atlas
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m      112 Aug 27 01:26 job.xml
[2023-08-27 01:49:56] -rw-r--r-- 2 m m    17604 Aug 27 01:26 start_atlas.sh
[2023-08-27 01:49:56] drwxrwx--x 2 m m     4096 Aug 27 01:26 shared
[2023-08-27 01:49:56] -rw-r--r-- 2 m m   428868 Aug 27 01:26 input.tar.gz
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m     5755 Aug 27 01:26 init_data.xml
[2023-08-27 01:49:56] -rw-r--r-- 2 m m 37224345 Aug 27 01:26 EVNT.04972714._000026.pool.root.1
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m        0 Aug 27 01:26 boinc_lockfile
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m     2752 Aug 27 01:26 pandaJob.out
[2023-08-27 01:49:56] -rw------- 1 m m      424 Aug 27 01:26 setup.sh.local
[2023-08-27 01:49:56] -rw------- 1 m m  1390000 Aug 27 01:28 cric_ddmendpoints.json
[2023-08-27 01:49:56] -rw------- 1 m m  1021863 Aug 27 01:28 agis_schedconf.cvmfs.json
[2023-08-27 01:49:56] drwx------ 4 m m     4096 Aug 27 01:29 pilot3
[2023-08-27 01:49:56] -rw------- 1 m m  1520099 Aug 27 01:42 output.1.750dabc7-f1a4-4663-a7d0-038a1e28eefe_37331.pool.root
[2023-08-27 01:49:56] -rw------- 1 m m     1021 Aug 27 01:43 memory_monitor_summary.json
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m      533 Aug 27 01:43 boinc_task_state.xml
[2023-08-27 01:49:56] -rw------- 1 m m   160202 Aug 27 01:46 750dabc7-f1a4-4663-a7d0-038a1e28eefe_37331.1.job.log.tgz
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m       25 Aug 27 01:49 wrapper_checkpoint.txt
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m     8192 Aug 27 01:49 boinc_mmap_file
[2023-08-27 01:49:56] -rw------- 1 m m     6643 Aug 27 01:49 heartbeat.json
[2023-08-27 01:49:56] -rw------- 1 m m     4092 Aug 27 01:49 pilotlog.txt
[2023-08-27 01:49:56] -rw------- 1 m m   189029 Aug 27 01:49 750dabc7-f1a4-4663-a7d0-038a1e28eefe_37331.1.job.log
[2023-08-27 01:49:56] -rw------- 1 m m      464 Aug 27 01:49 output.list
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m      748 Aug 27 01:49 runtime_log
[2023-08-27 01:49:56] -rw------- 1 m m  1884160 Aug 27 01:49 result.tar.gz
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m    11905 Aug 27 01:49 runtime_log.err
[2023-08-27 01:49:56] -rw------- 1 m m      626 Aug 27 01:49 As5NDmejIu3n7Olcko1bjSoqABFKDmABFKDm7AsVDmw4PKDmdSGtan.diag
[2023-08-27 01:49:56] -rw-rw-r-- 1 m m    22643 Aug 27 01:49 stderr.txt
[2023-08-27 01:49:56] HITS file was successfully produced:
[2023-08-27 01:49:56] -rw------- 1 m m 1520099 Aug 27 01:42 shared/HITS.pool.root.1
[2023-08-27 01:49:56]  *** Contents of shared directory: ***
[2023-08-27 01:49:56] total 40120
[2023-08-27 01:49:56] -rw-r--r-- 2 m m    17604 Aug 27 01:26 start_atlas.sh
[2023-08-27 01:49:56] -rw-r--r-- 2 m m   428868 Aug 27 01:26 input.tar.gz
[2023-08-27 01:49:56] -rw-r--r-- 2 m m 37224345 Aug 27 01:26 ATLAS.root_0
[2023-08-27 01:49:56] -rw------- 1 m m  1520099 Aug 27 01:42 HITS.pool.root.1
[2023-08-27 01:49:56] -rw------- 1 m m  1884160 Aug 27 01:49 result.tar.gz
01:49:58 (2646): run_atlas exited; CPU time 495.627920
01:49:58 (2646): called boinc_finish(0)

</stderr_txt>
]]>


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