Name | JCUMDmPlKu3n7Olcko1bjSoqABFKDmABFKDm7AsVDmM5PKDmRGdRen_0 |
Workunit | 2327717 |
Created | 27 Aug 2023, 2:33:02 UTC |
Sent | 27 Aug 2023, 2:37:29 UTC |
Report deadline | 3 Sep 2023, 2:37:29 UTC |
Received | 27 Aug 2023, 3:08:54 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 29 min 13 sec |
CPU time | 13 min 58 sec |
Validate state | Valid |
Credit | 20.82 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.50 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 80.10 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 03:38:31 (17405): wrapper (7.7.26015): starting 03:38:31 (17405): wrapper: running run_atlas (--nthreads 4) [2023-08-27 03:38:31] Arguments: --nthreads 4 [2023-08-27 03:38:31] Threads: 4 [2023-08-27 03:38:31] Checking for CVMFS [2023-08-27 03:38:33] Probing /cvmfs/atlas.cern.ch... OK [2023-08-27 03:38:35] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-08-27 03:38:35] Running cvmfs_config stat atlas.cern.ch [2023-08-27 03:38:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-08-27 03:38:35] 2.9.0.0 17553 0 24548 122927 3 1 2716632 4194304 0 130560 0 0 0.000 829 481 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-08-27 03:38:35] CVMFS is ok [2023-08-27 03:38:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-08-27 03:38:35] Checking for apptainer binary... [2023-08-27 03:38:35] Using apptainer found in PATH at /usr/bin/apptainer [2023-08-27 03:38:35] Running /usr/bin/apptainer --version [2023-08-27 03:38:35] apptainer version 1.0.3 [2023-08-27 03:38:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-08-27 03:38:35] TeeC16 [2023-08-27 03:38:35] apptainer works [2023-08-27 03:38:35] Set ATHENA_PROC_NUMBER=4 [2023-08-27 03:38:35] Set ATHENA_CORE_NUMBER=4 [2023-08-27 03:38:35] Starting ATLAS job with PandaID=5944178821 [2023-08-27 03:38:35] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-08-27 04:07:41] *** The last 200 lines of the pilot log: *** [2023-08-27 04:07:41] 2023-08-27 03:06:52,756 | INFO | monitor loop #232: job 0:5944178821 is in state 'stageout' [2023-08-27 04:07:41] 2023-08-27 03:06:52,757 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 779011 B [2023-08-27 04:07:41] 2023-08-27 03:06:52,757 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 9138 B [2023-08-27 04:07:41] 2023-08-27 03:06:52,757 | INFO | executing command: df -mP /home/m/BOINC/slots/0 [2023-08-27 04:07:41] 2023-08-27 03:06:52,773 | INFO | sufficient remaining disk space (424287404032 B) [2023-08-27 04:07:41] 2023-08-27 03:06:52,774 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2023-08-27 04:07:41] 2023-08-27 03:06:52,774 | INFO | size of work directory /home/m/BOINC/slots/0/PanDA_Pilot-5944178821: 1127554 B (within 61362667520 B limit) [2023-08-27 04:07:41] 2023-08-27 03:06:52,775 | INFO | pfn file=/home/m/BOINC/slots/0/PanDA_Pilot-5944178821/output.1.9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.pool.root does not exist (skip from workdir size calculat [2023-08-27 04:07:41] 2023-08-27 03:06:52,775 | INFO | total size of present files: 0 B (workdir size: 1127554 B) [2023-08-27 04:07:41] 2023-08-27 03:06:52,775 | INFO | output file size check: skipping output file /home/m/BOINC/slots/0/PanDA_Pilot-5944178821/output.1.9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.pool.root since it do [2023-08-27 04:07:41] 2023-08-27 03:06:52,834 | INFO | number of running child processes to parent process 29142: 1 [2023-08-27 04:07:41] 2023-08-27 03:06:52,835 | INFO | maximum number of monitored processes: 6 [2023-08-27 04:07:41] 2023-08-27 03:06:55,338 | INFO | monitor loop #233: job 0:5944178821 is in state 'stageout' [2023-08-27 04:07:41] 2023-08-27 03:06:55,401 | INFO | number of running child processes to parent process 29142: 1 [2023-08-27 04:07:41] 2023-08-27 03:06:55,402 | INFO | maximum number of monitored processes: 6 [2023-08-27 04:07:41] 2023-08-27 03:06:57,903 | INFO | monitor loop #234: job 0:5944178821 is in state 'stageout' [2023-08-27 04:07:41] 2023-08-27 03:06:57,962 | INFO | number of running child processes to parent process 29142: 1 [2023-08-27 04:07:41] 2023-08-27 03:06:57,962 | INFO | maximum number of monitored processes: 6 [2023-08-27 04:07:41] 2023-08-27 03:07:00,467 | INFO | monitor loop #235: job 0:5944178821 is in state 'stageout' [2023-08-27 04:07:41] 2023-08-27 03:07:00,520 | INFO | number of running child processes to parent process 29142: 1 [2023-08-27 04:07:41] 2023-08-27 03:07:00,520 | INFO | maximum number of monitored processes: 6 [2023-08-27 04:07:41] 2023-08-27 03:07:03,023 | INFO | monitor loop #236: job 0:5944178821 is in state 'stageout' [2023-08-27 04:07:41] 2023-08-27 03:07:03,072 | INFO | number of running child processes to parent process 29142: 1 [2023-08-27 04:07:41] 2023-08-27 03:07:03,073 | INFO | maximum number of monitored processes: 6 [2023-08-27 04:07:41] 2023-08-27 03:07:05,576 | INFO | monitor loop #237: job 0:5944178821 is in state 'stageout' [2023-08-27 04:07:41] 2023-08-27 03:07:05,642 | INFO | number of running child processes to parent process 29142: 1 [2023-08-27 04:07:41] 2023-08-27 03:07:05,643 | INFO | maximum number of monitored processes: 6 [2023-08-27 04:07:41] 2023-08-27 03:07:06,107 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-08-27 04:07:41] 2023-08-27 03:07:06,267 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-08-27 04:07:41] 2023-08-27 03:07:06,268 | WARNING | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag [2023-08-27 04:07:41] 2023-08-27 03:07:06,343 | INFO | transferring file 9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.1.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-5944178821/9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_7 [2023-08-27 04:07:41] 2023-08-27 03:07:06,343 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-5944178821/9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.1.job.log.tgz /home/m/BOINC/slots/0/9cb2 [2023-08-27 04:07:41] 2023-08-27 03:07:06,362 | INFO | Adding to output.list: 9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/8d/38/9cb28a67-495f- [2023-08-27 04:07:41] 2023-08-27 03:07:06,363 | INFO | summary of transferred files: [2023-08-27 04:07:41] 2023-08-27 03:07:06,363 | INFO | -- lfn=9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.1.job.log.tgz, status_code=0, status=transferred [2023-08-27 04:07:41] 2023-08-27 03:07:06,363 | INFO | stage-out finished correctly [2023-08-27 04:07:41] 2023-08-27 03:07:08,147 | INFO | monitor loop #238: job 0:5944178821 is in state 'finished' [2023-08-27 04:07:41] 2023-08-27 03:07:08,147 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-27 04:07:41] 2023-08-27 03:07:09,644 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-08-27 04:07:41] 2023-08-27 03:07:10,650 | INFO | monitor loop #239: job 0:5944178821 is in state 'finished' [2023-08-27 04:07:41] 2023-08-27 03:07:10,650 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-27 04:07:41] 2023-08-27 03:07:11,311 | INFO | job 5944178821 has state=finished [2023-08-27 04:07:41] 2023-08-27 03:07:11,311 | INFO | preparing for final server update for job 5944178821 in state='finished' [2023-08-27 04:07:41] 2023-08-27 03:07:11,312 | INFO | this job has now completed (state=finished) [2023-08-27 04:07:41] 2023-08-27 03:07:11,312 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-08-27 04:07:41] 2023-08-27 03:07:11,312 | INFO | job 5944178821 has finished - writing final server update [2023-08-27 04:07:41] 2023-08-27 03:07:11,313 | INFO | fitting pss+swap vs Time [2023-08-27 04:07:41] 2023-08-27 03:07:11,313 | INFO | current memory leak: 609.27 B/s (using 11 data points, chi2=0.07) [2023-08-27 04:07:41] 2023-08-27 03:07:11,314 | INFO | total number of processed events: 2 (read) [2023-08-27 04:07:41] 2023-08-27 03:07:11,332 | INFO | executing command: lscpu [2023-08-27 04:07:41] 2023-08-27 03:07:11,349 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-08-27 04:07:41] 2023-08-27 03:07:11,350 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-08-27 04:07:41] 2023-08-27 03:07:11,377 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-08-27 04:07:41] 2023-08-27 03:07:13,152 | INFO | monitor loop #240: job 0:5944178821 is in state 'finished' [2023-08-27 04:07:41] 2023-08-27 03:07:13,152 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-27 04:07:41] 2023-08-27 03:07:15,660 | INFO | monitor loop #241: job 0:5944178821 is in state 'finished' [2023-08-27 04:07:41] 2023-08-27 03:07:15,661 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-27 04:07:41] 2023-08-27 03:07:18,174 | INFO | monitor loop #242: job 0:5944178821 is in state 'finished' [2023-08-27 04:07:41] 2023-08-27 03:07:18,174 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-27 04:07:41] 2023-08-27 03:07:20,679 | INFO | monitor loop #243: job 0:5944178821 is in state 'finished' [2023-08-27 04:07:41] 2023-08-27 03:07:20,679 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-08-27 04:07:41] 2023-08-27 03:07:21,300 | INFO | CPU arch script returned: x86-64-v2 [2023-08-27 04:07:41] 2023-08-27 03:07:21,300 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5944178821/memory_monitor_summary.json (trf name=prmon) [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | extracted standard info from prmon json [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | extracted standard memory fields from prmon json [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | .............................. [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | . Timing measurements: [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | . get job = 65 s [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | . initial setup = 68 s [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | . payload setup = 11 s [2023-08-27 04:07:41] 2023-08-27 03:07:21,302 | INFO | . stage-in = 65 s [2023-08-27 04:07:41] 2023-08-27 03:07:21,303 | INFO | . payload execution = 1077 s [2023-08-27 04:07:41] 2023-08-27 03:07:21,303 | INFO | . stage-out = 384 s [2023-08-27 04:07:41] 2023-08-27 03:07:21,303 | INFO | .............................. [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | job summary report [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | -------------------------------------------------- [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | PanDA job id: 5944178821 [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | task id: NULL [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | errors: (none) [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | status: LOG_TRANSFER = DONE [2023-08-27 04:07:41] 2023-08-27 03:07:21,432 | INFO | pilot state: finished [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | transexitcode: 0 [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | exeerrorcode: 0 [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | exeerrordiag: [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | exitcode: 0 [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | exitmsg: OK [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | cpuconsumptiontime: 857 s [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | nevents: 2 [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | neventsw: 0 [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | pid: 29142 [2023-08-27 04:07:41] 2023-08-27 03:07:21,433 | INFO | pgrp: 29142 [2023-08-27 04:07:41] 2023-08-27 03:07:21,434 | INFO | corecount: 4 [2023-08-27 04:07:41] 2023-08-27 03:07:21,434 | INFO | event service: False [2023-08-27 04:07:41] 2023-08-27 03:07:21,434 | INFO | sizes: {0: 2490096, 1: 2490295, 12: 2490441, 22: 2490469, 33: 2490497, 44: 2490525, 54: 2490681, 65: 2490709, 73: 2490797, 76: 2490825, 1092: 2511026, 1478: 252036 [2023-08-27 04:07:41] 2023-08-27 03:07:21,434 | INFO | -------------------------------------------------- [2023-08-27 04:07:41] 2023-08-27 03:07:21,434 | INFO | [2023-08-27 04:07:41] 2023-08-27 03:07:21,434 | INFO | executing command: ls -lF /home/m/BOINC/slots/0 [2023-08-27 04:07:41] 2023-08-27 03:07:21,453 | INFO | queue jobs had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue payloads had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue data_in had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue data_out had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue current_data_in had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,454 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,455 | INFO | queue completed_jobids has 1 job(s) [2023-08-27 04:07:41] 2023-08-27 03:07:21,456 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,456 | INFO | queue messages had 0 job(s) [purged] [2023-08-27 04:07:41] 2023-08-27 03:07:21,456 | INFO | job 5944178821 has completed (purged errors) [2023-08-27 04:07:41] 2023-08-27 03:07:21,456 | INFO | overall cleanup function is called [2023-08-27 04:07:41] 2023-08-27 03:07:22,463 | INFO | --- collectZombieJob: --- 10, [29142] [2023-08-27 04:07:41] 2023-08-27 03:07:22,463 | INFO | zombie collector trying to kill pid 29142 [2023-08-27 04:07:41] 2023-08-27 03:07:22,463 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-08-27 04:07:41] 2023-08-27 03:07:23,467 | INFO | collected zombie processes [2023-08-27 04:07:41] 2023-08-27 03:07:23,467 | INFO | will now attempt to kill all subprocesses of pid=29142 [2023-08-27 04:07:41] 2023-08-27 03:07:23,535 | INFO | process IDs to be killed: [29142] (in reverse order) [2023-08-27 04:07:41] 2023-08-27 03:07:23,584 | WARNING | found no corresponding commands to process id(s) [2023-08-27 04:07:41] 2023-08-27 03:07:23,584 | INFO | Do not look for orphan processes in BOINC jobs [2023-08-27 04:07:41] 2023-08-27 03:07:23,584 | INFO | ready for new job [2023-08-27 04:07:41] 2023-08-27 03:07:23,584 | INFO | pilot has finished with previous job - re-establishing logging [2023-08-27 04:07:41] 2023-08-27 03:07:23,585 | INFO | ************************************* [2023-08-27 04:07:41] 2023-08-27 03:07:23,586 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-08-27 04:07:41] 2023-08-27 03:07:23,586 | INFO | ************************************* [2023-08-27 04:07:41] 2023-08-27 03:07:23,586 | INFO | [2023-08-27 04:07:41] 2023-08-27 03:07:23,607 | INFO | architecture information: [2023-08-27 04:07:41] 2023-08-27 03:07:23,607 | INFO | executing command: cat /etc/os-release [2023-08-27 04:07:41] 2023-08-27 03:07:23,628 | INFO | cat /etc/os-release: [2023-08-27 04:07:41] NAME="CentOS Linux" [2023-08-27 04:07:41] VERSION="7 (Core)" [2023-08-27 04:07:41] ID="centos" [2023-08-27 04:07:41] ID_LIKE="rhel fedora" [2023-08-27 04:07:41] VERSION_ID="7" [2023-08-27 04:07:41] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-08-27 04:07:41] ANSI_COLOR="0;31" [2023-08-27 04:07:41] CPE_NAME="cpe:/o:centos:centos:7" [2023-08-27 04:07:41] HOME_URL="https://www.centos.org/" [2023-08-27 04:07:41] BUG_REPORT_URL="https://bugs.centos.org/" [2023-08-27 04:07:41] [2023-08-27 04:07:41] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-08-27 04:07:41] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-08-27 04:07:41] REDHAT_SUPPORT_PRODUCT="centos" [2023-08-27 04:07:41] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-08-27 04:07:41] [2023-08-27 04:07:41] 2023-08-27 03:07:23,628 | INFO | ************************************* [2023-08-27 04:07:41] 2023-08-27 03:07:24,131 | INFO | executing command: df -mP /home/m/BOINC/slots/0 [2023-08-27 04:07:41] 2023-08-27 03:07:24,146 | INFO | sufficient remaining disk space (424288452608 B) [2023-08-27 04:07:41] 2023-08-27 03:07:24,146 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-08-27 04:07:41] 2023-08-27 03:07:24,146 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-08-27 04:07:41] 2023-08-27 03:07:24,187 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-08-27 04:07:41] 2023-08-27 03:07:24,187 | INFO | aborting loop [2023-08-27 04:07:41] 2023-08-27 03:07:24,522 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-08-27 04:07:41] 2023-08-27 03:07:24,831 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-08-27 04:07:41] 2023-08-27 03:07:24,879 | INFO | found 0 job(s) in 20 queues [2023-08-27 04:07:41] 2023-08-27 03:07:24,879 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-08-27 04:07:41] 2023-08-27 03:07:24,879 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-08-27 04:07:41] 2023-08-27 03:07:25,151 | INFO | [job] retrieve thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,193 | INFO | [job] job monitor thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,263 | INFO | [job] validate thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,520 | INFO | [payload] control thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,555 | INFO | [job] create_data_payload thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,594 | INFO | [data] copytool_in thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,711 | INFO | [data] control thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,759 | INFO | [job] control thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,816 | INFO | [payload] execute_payloads thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:25,855 | INFO | [payload] validate_post thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:26,099 | INFO | [payload] validate_pre thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:26,139 | INFO | [payload] failed_post thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:26,439 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-08-27 04:07:41] 2023-08-27 03:07:26,527 | INFO | [data] copytool_out thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:27,443 | INFO | [job] queue monitor thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:28,835 | INFO | [data] queue_monitor thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:35,107 | INFO | job.realtimelogging is not enabled [2023-08-27 04:07:41] 2023-08-27 03:07:36,111 | INFO | [payload] run_realtimelog thread has finished [2023-08-27 04:07:41] 2023-08-27 03:07:36,339 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140281580275520)>', '<ExcThread(monitor, started 140281307440896)>'] [2023-08-27 04:07:41] 2023-08-27 03:07:36,927 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-08-27 04:07:41] 2023-08-27 03:07:36,927 | INFO | [monitor] control thread has ended [2023-08-27 04:07:41] 2023-08-27 03:07:41,362 | INFO | end of generic workflow (traces error code: 0) [2023-08-27 04:07:41] 2023-08-27 03:07:41,363 | INFO | traces error code: 0 [2023-08-27 04:07:41] 2023-08-27 03:07:41,363 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-08-27 04:07:41] 2023-08-27 03:07:41,434 [wrapper] ==== pilot stdout END ==== [2023-08-27 04:07:41] 2023-08-27 03:07:41,438 [wrapper] ==== wrapper stdout RESUME ==== [2023-08-27 04:07:41] 2023-08-27 03:07:41,443 [wrapper] pilotpid: 21087 [2023-08-27 04:07:41] 2023-08-27 03:07:41,447 [wrapper] Pilot exit status: 0 [2023-08-27 04:07:41] 2023-08-27 03:07:41,484 [wrapper] pandaids: 5944178821 [2023-08-27 04:07:41] 2023-08-27 03:07:41,492 [wrapper] apfmon messages muted [2023-08-27 04:07:41] 2023-08-27 03:07:41,496 [wrapper] Test setup, not cleaning [2023-08-27 04:07:41] 2023-08-27 03:07:41,500 [wrapper] ==== wrapper stdout END ==== [2023-08-27 04:07:41] 2023-08-27 03:07:41,505 [wrapper] ==== wrapper stderr END ==== [2023-08-27 04:07:41] 2023-08-27 03:07:41,513 [wrapper] wrapperexiting ec=0, duration=1745 [2023-08-27 04:07:41] 2023-08-27 03:07:41,518 [wrapper] apfmon messages muted [2023-08-27 04:07:41] *** Error codes and diagnostics *** [2023-08-27 04:07:41] "exeErrorCode": 0, [2023-08-27 04:07:41] "exeErrorDiag": "", [2023-08-27 04:07:41] "pilotErrorCode": 0, [2023-08-27 04:07:41] "pilotErrorDiag": "", [2023-08-27 04:07:41] *** Listing of results directory *** [2023-08-27 04:07:41] total 43468 [2023-08-27 04:07:41] -rw-r--r-- 1 m m 4388 Aug 27 03:31 queuedata.json [2023-08-27 04:07:41] -rwx------ 1 m m 27277 Aug 27 03:32 runpilot2-wrapper.sh [2023-08-27 04:07:41] -rw-r--r-- 1 m m 418016 Aug 27 03:32 pilot3.tar.gz [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 107 Aug 27 03:38 wrapper_26015_x86_64-pc-linux-gnu [2023-08-27 04:07:41] -rwxr-xr-x 1 m m 7986 Aug 27 03:38 run_atlas [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 112 Aug 27 03:38 job.xml [2023-08-27 04:07:41] -rw-r--r-- 2 m m 17604 Aug 27 03:38 start_atlas.sh [2023-08-27 04:07:41] drwxrwx--x 2 m m 4096 Aug 27 03:38 shared [2023-08-27 04:07:41] -rw-r--r-- 2 m m 428864 Aug 27 03:38 input.tar.gz [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 5755 Aug 27 03:38 init_data.xml [2023-08-27 04:07:41] -rw-r--r-- 2 m m 37224345 Aug 27 03:38 EVNT.04972714._000026.pool.root.1 [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 0 Aug 27 03:38 boinc_lockfile [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 2752 Aug 27 03:38 pandaJob.out [2023-08-27 04:07:41] -rw------- 1 m m 424 Aug 27 03:38 setup.sh.local [2023-08-27 04:07:41] -rw------- 1 m m 1390000 Aug 27 03:39 cric_ddmendpoints.json [2023-08-27 04:07:41] -rw------- 1 m m 1021847 Aug 27 03:40 agis_schedconf.cvmfs.json [2023-08-27 04:07:41] drwx------ 4 m m 4096 Aug 27 03:41 pilot3 [2023-08-27 04:07:41] -rw------- 1 m m 1520098 Aug 27 04:00 output.1.9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.pool.root [2023-08-27 04:07:41] -rw------- 1 m m 1017 Aug 27 04:00 memory_monitor_summary.json [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 533 Aug 27 04:00 boinc_task_state.xml [2023-08-27 04:07:41] -rw------- 1 m m 163382 Aug 27 04:03 9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.1.job.log.tgz [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 25 Aug 27 04:07 wrapper_checkpoint.txt [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 8192 Aug 27 04:07 boinc_mmap_file [2023-08-27 04:07:41] -rw------- 1 m m 6675 Aug 27 04:07 heartbeat.json [2023-08-27 04:07:41] -rw------- 1 m m 3969 Aug 27 04:07 pilotlog.txt [2023-08-27 04:07:41] -rw------- 1 m m 220389 Aug 27 04:07 9cb28a67-495f-41c8-8b6a-ed1ce0a4d0c4_73375.1.job.log [2023-08-27 04:07:41] -rw------- 1 m m 464 Aug 27 04:07 output.list [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 748 Aug 27 04:07 runtime_log [2023-08-27 04:07:41] -rw------- 1 m m 1925120 Aug 27 04:07 result.tar.gz [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 11905 Aug 27 04:07 runtime_log.err [2023-08-27 04:07:41] -rw------- 1 m m 626 Aug 27 04:07 JCUMDmPlKu3n7Olcko1bjSoqABFKDmABFKDm7AsVDmM5PKDmRGdRen.diag [2023-08-27 04:07:41] -rw-rw-r-- 1 m m 22867 Aug 27 04:07 stderr.txt [2023-08-27 04:07:41] HITS file was successfully produced: [2023-08-27 04:07:41] -rw------- 1 m m 1520098 Aug 27 04:00 shared/HITS.pool.root.1 [2023-08-27 04:07:41] *** Contents of shared directory: *** [2023-08-27 04:07:41] total 40160 [2023-08-27 04:07:41] -rw-r--r-- 2 m m 17604 Aug 27 03:38 start_atlas.sh [2023-08-27 04:07:41] -rw-r--r-- 2 m m 428864 Aug 27 03:38 input.tar.gz [2023-08-27 04:07:41] -rw-r--r-- 2 m m 37224345 Aug 27 03:38 ATLAS.root_0 [2023-08-27 04:07:41] -rw------- 1 m m 1520098 Aug 27 04:00 HITS.pool.root.1 [2023-08-27 04:07:41] -rw------- 1 m m 1925120 Aug 27 04:07 result.tar.gz 04:07:42 (17405): run_atlas exited; CPU time 838.334017 04:07:42 (17405): called boinc_finish(0) </stderr_txt> ]]>
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