Name | 1CtLDmlcTw3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDSQKDmMVZkVm_0 |
Workunit | 2329037 |
Created | 2 Sep 2023, 0:25:01 UTC |
Sent | 2 Sep 2023, 0:25:13 UTC |
Report deadline | 9 Sep 2023, 0:25:13 UTC |
Received | 2 Sep 2023, 0:59:23 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 32 min 5 sec |
CPU time | 3 min 31 sec |
Validate state | Valid |
Credit | 22.09 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.61 GB |
Peak swap size | 3.11 GB |
Peak disk usage | 80.90 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 01:26:18 (2621): wrapper (7.7.26015): starting 01:26:18 (2621): wrapper: running run_atlas (--nthreads 4) [2023-09-02 01:26:18] Arguments: --nthreads 4 [2023-09-02 01:26:18] Threads: 4 [2023-09-02 01:26:18] Checking for CVMFS [2023-09-02 01:26:30] Probing /cvmfs/atlas.cern.ch... OK [2023-09-02 01:26:35] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-09-02 01:26:35] Running cvmfs_config stat atlas.cern.ch [2023-09-02 01:26:35] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-09-02 01:26:35] 2.9.0.0 2843 0 24628 123148 3 1 3433392 4194305 0 130560 0 0 0.000 960 375 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-09-02 01:26:35] CVMFS is ok [2023-09-02 01:26:35] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-09-02 01:26:35] Checking for apptainer binary... [2023-09-02 01:26:35] Using apptainer found in PATH at /usr/bin/apptainer [2023-09-02 01:26:35] Running /usr/bin/apptainer --version [2023-09-02 01:26:35] apptainer version 1.0.3 [2023-09-02 01:26:35] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-09-02 01:26:37] TeeC16 [2023-09-02 01:26:37] apptainer works [2023-09-02 01:26:37] Set ATHENA_PROC_NUMBER=4 [2023-09-02 01:26:37] Set ATHENA_CORE_NUMBER=4 [2023-09-02 01:26:37] Starting ATLAS job with PandaID=5949955004 [2023-09-02 01:26:37] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-09-02 01:58:20] *** The last 200 lines of the pilot log: *** [2023-09-02 01:58:20] 2023-09-02 00:57:32,327 | INFO | monitor loop #255: job 0:5949955004 is in state 'stageout' [2023-09-02 01:58:20] 2023-09-02 00:57:32,371 | INFO | number of running child processes to parent process 13106: 1 [2023-09-02 01:58:20] 2023-09-02 00:57:32,371 | INFO | maximum number of monitored processes: 7 [2023-09-02 01:58:20] 2023-09-02 00:57:34,874 | INFO | monitor loop #256: job 0:5949955004 is in state 'stageout' [2023-09-02 01:58:20] 2023-09-02 00:57:34,875 | INFO | payload log (log.EVNTtoHITS) within allowed size limit (2147483648 B): 717100 B [2023-09-02 01:58:20] 2023-09-02 00:57:34,875 | INFO | payload log (payload.stdout) within allowed size limit (2147483648 B): 9088 B [2023-09-02 01:58:20] 2023-09-02 00:57:34,875 | INFO | executing command: df -mP /home/m/BOINC/slots/0 [2023-09-02 01:58:20] 2023-09-02 00:57:34,890 | INFO | sufficient remaining disk space (424707883008 B) [2023-09-02 01:58:20] 2023-09-02 00:57:34,890 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2023-09-02 01:58:20] 2023-09-02 00:57:34,891 | INFO | size of work directory /home/m/BOINC/slots/0/PanDA_Pilot-5949955004: 1091045 B (within 61362667520 B limit) [2023-09-02 01:58:20] 2023-09-02 00:57:34,891 | INFO | pfn file=/home/m/BOINC/slots/0/PanDA_Pilot-5949955004/output.1.7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.pool.root does not exist (skip from workdir size calculat [2023-09-02 01:58:20] 2023-09-02 00:57:34,891 | INFO | total size of present files: 0 B (workdir size: 1091045 B) [2023-09-02 01:58:20] 2023-09-02 00:57:34,891 | INFO | output file size check: skipping output file /home/m/BOINC/slots/0/PanDA_Pilot-5949955004/output.1.7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.pool.root since it do [2023-09-02 01:58:20] 2023-09-02 00:57:34,932 | INFO | number of running child processes to parent process 13106: 1 [2023-09-02 01:58:20] 2023-09-02 00:57:34,933 | INFO | maximum number of monitored processes: 7 [2023-09-02 01:58:20] 2023-09-02 00:57:37,436 | INFO | monitor loop #257: job 0:5949955004 is in state 'stageout' [2023-09-02 01:58:20] 2023-09-02 00:57:37,481 | INFO | number of running child processes to parent process 13106: 1 [2023-09-02 01:58:20] 2023-09-02 00:57:37,481 | INFO | maximum number of monitored processes: 7 [2023-09-02 01:58:20] 2023-09-02 00:57:39,984 | INFO | monitor loop #258: job 0:5949955004 is in state 'stageout' [2023-09-02 01:58:20] 2023-09-02 00:57:40,022 | INFO | number of running child processes to parent process 13106: 1 [2023-09-02 01:58:20] 2023-09-02 00:57:40,023 | INFO | maximum number of monitored processes: 7 [2023-09-02 01:58:20] 2023-09-02 00:57:42,526 | INFO | monitor loop #259: job 0:5949955004 is in state 'stageout' [2023-09-02 01:58:20] 2023-09-02 00:57:42,570 | INFO | number of running child processes to parent process 13106: 1 [2023-09-02 01:58:20] 2023-09-02 00:57:42,570 | INFO | maximum number of monitored processes: 7 [2023-09-02 01:58:20] 2023-09-02 00:57:45,073 | INFO | monitor loop #260: job 0:5949955004 is in state 'stageout' [2023-09-02 01:58:20] 2023-09-02 00:57:45,116 | INFO | number of running child processes to parent process 13106: 1 [2023-09-02 01:58:20] 2023-09-02 00:57:45,116 | INFO | maximum number of monitored processes: 7 [2023-09-02 01:58:20] 2023-09-02 00:57:46,826 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-09-02 01:58:20] 2023-09-02 00:57:46,965 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-09-02 01:58:20] 2023-09-02 00:57:46,965 | WARNING | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag [2023-09-02 01:58:20] 2023-09-02 00:57:47,014 | INFO | transferring file 7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.1.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-5949955004/7379f03f-b8ab-4838-afd5-354ee8f3cd62_7 [2023-09-02 01:58:20] 2023-09-02 00:57:47,014 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-5949955004/7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.1.job.log.tgz /home/m/BOINC/slots/0/7379 [2023-09-02 01:58:20] 2023-09-02 00:57:47,033 | INFO | Adding to output.list: 7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e3/fd/7379f03f-b8ab- [2023-09-02 01:58:20] 2023-09-02 00:57:47,034 | INFO | summary of transferred files: [2023-09-02 01:58:20] 2023-09-02 00:57:47,034 | INFO | -- lfn=7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.1.job.log.tgz, status_code=0, status=transferred [2023-09-02 01:58:20] 2023-09-02 00:57:47,035 | INFO | stage-out finished correctly [2023-09-02 01:58:20] 2023-09-02 00:57:47,619 | INFO | monitor loop #261: job 0:5949955004 is in state 'finished' [2023-09-02 01:58:20] 2023-09-02 00:57:47,619 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-02 01:58:20] 2023-09-02 00:57:49,051 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-09-02 01:58:20] 2023-09-02 00:57:49,606 | INFO | job 5949955004 has state=finished [2023-09-02 01:58:20] 2023-09-02 00:57:49,606 | INFO | preparing for final server update for job 5949955004 in state='finished' [2023-09-02 01:58:20] 2023-09-02 00:57:49,607 | INFO | this job has now completed (state=finished) [2023-09-02 01:58:20] 2023-09-02 00:57:49,607 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-09-02 01:58:20] 2023-09-02 00:57:49,607 | INFO | job 5949955004 has finished - writing final server update [2023-09-02 01:58:20] 2023-09-02 00:57:49,608 | INFO | fitting pss+swap vs Time [2023-09-02 01:58:20] 2023-09-02 00:57:49,609 | INFO | current memory leak: 2587.30 B/s (using 13 data points, chi2=0.21) [2023-09-02 01:58:20] 2023-09-02 00:57:49,610 | INFO | total number of processed events: 2 (read) [2023-09-02 01:58:20] 2023-09-02 00:57:49,628 | INFO | executing command: lscpu [2023-09-02 01:58:20] 2023-09-02 00:57:49,648 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-09-02 01:58:20] 2023-09-02 00:57:49,648 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-09-02 01:58:20] 2023-09-02 00:57:49,674 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-09-02 01:58:20] 2023-09-02 00:57:50,122 | INFO | monitor loop #262: job 0:5949955004 is in state 'finished' [2023-09-02 01:58:20] 2023-09-02 00:57:50,122 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-02 01:58:20] 2023-09-02 00:57:52,625 | INFO | monitor loop #263: job 0:5949955004 is in state 'finished' [2023-09-02 01:58:20] 2023-09-02 00:57:52,626 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-02 01:58:20] 2023-09-02 00:57:55,127 | INFO | monitor loop #264: job 0:5949955004 is in state 'finished' [2023-09-02 01:58:20] 2023-09-02 00:57:55,133 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-02 01:58:20] 2023-09-02 00:57:57,635 | INFO | monitor loop #265: job 0:5949955004 is in state 'finished' [2023-09-02 01:58:20] 2023-09-02 00:57:57,635 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-02 01:58:20] 2023-09-02 00:57:59,455 | INFO | CPU arch script returned: x86-64-v2 [2023-09-02 01:58:20] 2023-09-02 00:57:59,455 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5949955004/memory_monitor_summary.json (trf name=prmon) [2023-09-02 01:58:20] 2023-09-02 00:57:59,456 | INFO | extracted standard info from prmon json [2023-09-02 01:58:20] 2023-09-02 00:57:59,456 | INFO | extracted standard memory fields from prmon json [2023-09-02 01:58:20] 2023-09-02 00:57:59,456 | INFO | .............................. [2023-09-02 01:58:20] 2023-09-02 00:57:59,456 | INFO | . Timing measurements: [2023-09-02 01:58:20] 2023-09-02 00:57:59,456 | INFO | . get job = 61 s [2023-09-02 01:58:20] 2023-09-02 00:57:59,457 | INFO | . initial setup = 63 s [2023-09-02 01:58:20] 2023-09-02 00:57:59,457 | INFO | . payload setup = 32 s [2023-09-02 01:58:20] 2023-09-02 00:57:59,457 | INFO | . stage-in = 73 s [2023-09-02 01:58:20] 2023-09-02 00:57:59,457 | INFO | . payload execution = 1166 s [2023-09-02 01:58:20] 2023-09-02 00:57:59,457 | INFO | . stage-out = 394 s [2023-09-02 01:58:20] 2023-09-02 00:57:59,457 | INFO | .............................. [2023-09-02 01:58:20] 2023-09-02 00:57:59,639 | INFO | [2023-09-02 01:58:20] 2023-09-02 00:57:59,639 | INFO | job summary report [2023-09-02 01:58:20] 2023-09-02 00:57:59,639 | INFO | -------------------------------------------------- [2023-09-02 01:58:20] 2023-09-02 00:57:59,639 | INFO | PanDA job id: 5949955004 [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | task id: NULL [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | errors: (none) [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | status: LOG_TRANSFER = DONE [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | pilot state: finished [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | transexitcode: 0 [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | exeerrorcode: 0 [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | exeerrordiag: [2023-09-02 01:58:20] 2023-09-02 00:57:59,640 | INFO | exitcode: 0 [2023-09-02 01:58:20] 2023-09-02 00:57:59,641 | INFO | exitmsg: OK [2023-09-02 01:58:20] 2023-09-02 00:57:59,641 | INFO | cpuconsumptiontime: 228 s [2023-09-02 01:58:20] 2023-09-02 00:57:59,641 | INFO | nevents: 2 [2023-09-02 01:58:20] 2023-09-02 00:57:59,641 | INFO | neventsw: 0 [2023-09-02 01:58:20] 2023-09-02 00:57:59,641 | INFO | pid: 13106 [2023-09-02 01:58:20] 2023-09-02 00:57:59,641 | INFO | pgrp: 13106 [2023-09-02 01:58:20] 2023-09-02 00:57:59,641 | INFO | corecount: 4 [2023-09-02 01:58:20] 2023-09-02 00:57:59,642 | INFO | event service: False [2023-09-02 01:58:20] 2023-09-02 00:57:59,642 | INFO | sizes: {0: 2490109, 11: 2490255, 22: 2490283, 32: 2490311, 43: 2490339, 53: 2490367, 64: 2490523, 75: 2490579, 79: 2490667, 85: 2490723, 1202: 2512754, 1596: 25220 [2023-09-02 01:58:20] 2023-09-02 00:57:59,642 | INFO | -------------------------------------------------- [2023-09-02 01:58:20] 2023-09-02 00:57:59,642 | INFO | [2023-09-02 01:58:20] 2023-09-02 00:57:59,642 | INFO | executing command: ls -lF /home/m/BOINC/slots/0 [2023-09-02 01:58:20] 2023-09-02 00:57:59,665 | INFO | queue jobs had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,665 | INFO | queue payloads had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,665 | INFO | queue data_in had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,665 | INFO | queue data_out had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,665 | INFO | queue current_data_in had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,665 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,665 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,666 | INFO | queue completed_jobids has 1 job(s) [2023-09-02 01:58:20] 2023-09-02 00:57:59,667 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,667 | INFO | queue messages had 0 job(s) [purged] [2023-09-02 01:58:20] 2023-09-02 00:57:59,667 | INFO | job 5949955004 has completed (purged errors) [2023-09-02 01:58:20] 2023-09-02 00:57:59,667 | INFO | overall cleanup function is called [2023-09-02 01:58:20] 2023-09-02 00:58:00,674 | INFO | --- collectZombieJob: --- 10, [13106] [2023-09-02 01:58:20] 2023-09-02 00:58:00,675 | INFO | zombie collector trying to kill pid 13106 [2023-09-02 01:58:20] 2023-09-02 00:58:00,675 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-09-02 01:58:20] 2023-09-02 00:58:01,680 | INFO | collected zombie processes [2023-09-02 01:58:20] 2023-09-02 00:58:01,680 | INFO | will now attempt to kill all subprocesses of pid=13106 [2023-09-02 01:58:20] 2023-09-02 00:58:01,724 | INFO | process IDs to be killed: [13106] (in reverse order) [2023-09-02 01:58:20] 2023-09-02 00:58:01,760 | WARNING | found no corresponding commands to process id(s) [2023-09-02 01:58:20] 2023-09-02 00:58:01,760 | INFO | Do not look for orphan processes in BOINC jobs [2023-09-02 01:58:20] 2023-09-02 00:58:01,760 | INFO | ready for new job [2023-09-02 01:58:20] 2023-09-02 00:58:01,760 | INFO | pilot has finished with previous job - re-establishing logging [2023-09-02 01:58:20] 2023-09-02 00:58:01,761 | INFO | ************************************* [2023-09-02 01:58:20] 2023-09-02 00:58:01,761 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-09-02 01:58:20] 2023-09-02 00:58:01,761 | INFO | ************************************* [2023-09-02 01:58:20] 2023-09-02 00:58:01,761 | INFO | [2023-09-02 01:58:20] 2023-09-02 00:58:01,779 | INFO | architecture information: [2023-09-02 01:58:20] 2023-09-02 00:58:01,779 | INFO | executing command: cat /etc/os-release [2023-09-02 01:58:20] 2023-09-02 00:58:01,790 | INFO | cat /etc/os-release: [2023-09-02 01:58:20] NAME="CentOS Linux" [2023-09-02 01:58:20] VERSION="7 (Core)" [2023-09-02 01:58:20] ID="centos" [2023-09-02 01:58:20] ID_LIKE="rhel fedora" [2023-09-02 01:58:20] VERSION_ID="7" [2023-09-02 01:58:20] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-09-02 01:58:20] ANSI_COLOR="0;31" [2023-09-02 01:58:20] CPE_NAME="cpe:/o:centos:centos:7" [2023-09-02 01:58:20] HOME_URL="https://www.centos.org/" [2023-09-02 01:58:20] BUG_REPORT_URL="https://bugs.centos.org/" [2023-09-02 01:58:20] [2023-09-02 01:58:20] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-09-02 01:58:20] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-09-02 01:58:20] REDHAT_SUPPORT_PRODUCT="centos" [2023-09-02 01:58:20] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-09-02 01:58:20] [2023-09-02 01:58:20] 2023-09-02 00:58:01,790 | INFO | ************************************* [2023-09-02 01:58:20] 2023-09-02 00:58:02,293 | INFO | executing command: df -mP /home/m/BOINC/slots/0 [2023-09-02 01:58:20] 2023-09-02 00:58:02,311 | INFO | sufficient remaining disk space (424708931584 B) [2023-09-02 01:58:20] 2023-09-02 00:58:02,311 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-09-02 01:58:20] 2023-09-02 00:58:02,311 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-09-02 01:58:20] 2023-09-02 00:58:02,312 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-09-02 01:58:20] 2023-09-02 00:58:02,312 | INFO | found 0 job(s) in 20 queues [2023-09-02 01:58:20] 2023-09-02 00:58:02,312 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-09-02 01:58:20] 2023-09-02 00:58:02,312 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-09-02 01:58:20] 2023-09-02 00:58:02,619 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-09-02 01:58:20] 2023-09-02 00:58:02,646 | WARNING | job monitor detected an abort_job request (signal=None) [2023-09-02 01:58:20] 2023-09-02 00:58:02,646 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-09-02 01:58:20] 2023-09-02 00:58:02,646 | INFO | will abort loop [2023-09-02 01:58:20] 2023-09-02 00:58:03,317 | INFO | [job] retrieve thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,635 | INFO | [payload] control thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,652 | INFO | [job] job monitor thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,667 | INFO | [job] control thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,728 | INFO | [job] validate thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,778 | INFO | [payload] failed_post thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,845 | INFO | [payload] execute_payloads thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,917 | INFO | [job] create_data_payload thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:03,980 | INFO | [payload] validate_pre thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:04,125 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-09-02 01:58:20] 2023-09-02 00:58:04,171 | INFO | [data] control thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:04,179 | INFO | [data] copytool_in thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:04,351 | INFO | [payload] validate_post thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:04,529 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-09-02 01:58:20] 2023-09-02 00:58:04,625 | INFO | [data] copytool_out thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:05,535 | INFO | [job] queue monitor thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:08,131 | INFO | [data] queue_monitor thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:13,261 | INFO | job.realtimelogging is not enabled [2023-09-02 01:58:20] 2023-09-02 00:58:14,266 | INFO | [payload] run_realtimelog thread has finished [2023-09-02 01:58:20] 2023-09-02 00:58:15,244 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140166757852992)>', '<ExcThread(monitor, started 140166115092224)>'] [2023-09-02 01:58:20] 2023-09-02 00:58:15,378 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-09-02 01:58:20] 2023-09-02 00:58:15,378 | INFO | [monitor] control thread has ended [2023-09-02 01:58:20] 2023-09-02 00:58:20,269 | INFO | end of generic workflow (traces error code: 0) [2023-09-02 01:58:20] 2023-09-02 00:58:20,270 | INFO | traces error code: 0 [2023-09-02 01:58:20] 2023-09-02 00:58:20,270 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-09-02 01:58:20] 2023-09-02 00:58:20,323 [wrapper] ==== pilot stdout END ==== [2023-09-02 01:58:20] 2023-09-02 00:58:20,326 [wrapper] ==== wrapper stdout RESUME ==== [2023-09-02 01:58:20] 2023-09-02 00:58:20,330 [wrapper] pilotpid: 6401 [2023-09-02 01:58:20] 2023-09-02 00:58:20,334 [wrapper] Pilot exit status: 0 [2023-09-02 01:58:20] 2023-09-02 00:58:20,344 [wrapper] pandaids: 5949955004 [2023-09-02 01:58:20] 2023-09-02 00:58:20,351 [wrapper] apfmon messages muted [2023-09-02 01:58:20] 2023-09-02 00:58:20,355 [wrapper] Test setup, not cleaning [2023-09-02 01:58:20] 2023-09-02 00:58:20,358 [wrapper] ==== wrapper stdout END ==== [2023-09-02 01:58:20] 2023-09-02 00:58:20,362 [wrapper] ==== wrapper stderr END ==== [2023-09-02 01:58:20] 2023-09-02 00:58:20,371 [wrapper] wrapperexiting ec=0, duration=1903 [2023-09-02 01:58:20] 2023-09-02 00:58:20,376 [wrapper] apfmon messages muted [2023-09-02 01:58:20] *** Error codes and diagnostics *** [2023-09-02 01:58:20] "exeErrorCode": 0, [2023-09-02 01:58:20] "exeErrorDiag": "", [2023-09-02 01:58:20] "pilotErrorCode": 0, [2023-09-02 01:58:20] "pilotErrorDiag": "", [2023-09-02 01:58:20] *** Listing of results directory *** [2023-09-02 01:58:20] total 44752 [2023-09-02 01:58:20] -rw-r--r-- 1 m m 418016 Sep 2 00:32 pilot3.tar.gz [2023-09-02 01:58:20] -rwx------ 1 m m 27277 Sep 2 01:24 runpilot2-wrapper.sh [2023-09-02 01:58:20] -rw-r--r-- 1 m m 4388 Sep 2 01:24 queuedata.json [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 107 Sep 2 01:26 wrapper_26015_x86_64-pc-linux-gnu [2023-09-02 01:58:20] -rwxr-xr-x 1 m m 7986 Sep 2 01:26 run_atlas [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 112 Sep 2 01:26 job.xml [2023-09-02 01:58:20] -rw-r--r-- 2 m m 17604 Sep 2 01:26 start_atlas.sh [2023-09-02 01:58:20] drwxrwx--x 2 m m 4096 Sep 2 01:26 shared [2023-09-02 01:58:20] -rw-r--r-- 2 m m 428816 Sep 2 01:26 input.tar.gz [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 5755 Sep 2 01:26 init_data.xml [2023-09-02 01:58:20] -rw-r--r-- 2 m m 37620382 Sep 2 01:26 EVNT.04972714._000038.pool.root.1 [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 0 Sep 2 01:26 boinc_lockfile [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 2681 Sep 2 01:26 pandaJob.out [2023-09-02 01:58:20] -rw------- 1 m m 424 Sep 2 01:26 setup.sh.local [2023-09-02 01:58:20] -rw------- 1 m m 1390011 Sep 2 01:28 cric_ddmendpoints.json [2023-09-02 01:58:20] -rw------- 1 m m 1028014 Sep 2 01:28 agis_schedconf.cvmfs.json [2023-09-02 01:58:20] drwx------ 4 m m 4096 Sep 2 01:29 pilot3 [2023-09-02 01:58:20] -rw------- 1 m m 1942423 Sep 2 01:51 output.1.7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.pool.root [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 533 Sep 2 01:51 boinc_task_state.xml [2023-09-02 01:58:20] -rw------- 1 m m 1024 Sep 2 01:51 memory_monitor_summary.json [2023-09-02 01:58:20] -rw------- 1 m m 181640 Sep 2 01:54 7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.1.job.log.tgz [2023-09-02 01:58:20] -rw------- 1 m m 7085 Sep 2 01:57 heartbeat.json [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 8192 Sep 2 01:58 boinc_mmap_file [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 25 Sep 2 01:58 wrapper_checkpoint.txt [2023-09-02 01:58:20] -rw------- 1 m m 4187 Sep 2 01:58 pilotlog.txt [2023-09-02 01:58:20] -rw------- 1 m m 235121 Sep 2 01:58 7379f03f-b8ab-4838-afd5-354ee8f3cd62_73045.1.job.log [2023-09-02 01:58:20] -rw------- 1 m m 464 Sep 2 01:58 output.list [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 748 Sep 2 01:58 runtime_log [2023-09-02 01:58:20] -rw------- 1 m m 2375680 Sep 2 01:58 result.tar.gz [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 11905 Sep 2 01:58 runtime_log.err [2023-09-02 01:58:20] -rw------- 1 m m 626 Sep 2 01:58 1CtLDmlcTw3n7Olcko1bjSoqABFKDmABFKDm7AsVDmDSQKDmMVZkVm.diag [2023-09-02 01:58:20] -rw-rw-r-- 1 m m 22869 Sep 2 01:58 stderr.txt [2023-09-02 01:58:20] HITS file was successfully produced: [2023-09-02 01:58:20] -rw------- 1 m m 1942423 Sep 2 01:51 shared/HITS.pool.root.1 [2023-09-02 01:58:20] *** Contents of shared directory: *** [2023-09-02 01:58:20] total 41400 [2023-09-02 01:58:20] -rw-r--r-- 2 m m 17604 Sep 2 01:26 start_atlas.sh [2023-09-02 01:58:20] -rw-r--r-- 2 m m 428816 Sep 2 01:26 input.tar.gz [2023-09-02 01:58:20] -rw-r--r-- 2 m m 37620382 Sep 2 01:26 ATLAS.root_0 [2023-09-02 01:58:20] -rw------- 1 m m 1942423 Sep 2 01:51 HITS.pool.root.1 [2023-09-02 01:58:20] -rw------- 1 m m 2375680 Sep 2 01:58 result.tar.gz 01:58:22 (2621): run_atlas exited; CPU time 211.427027 01:58:22 (2621): called boinc_finish(0) </stderr_txt> ]]>
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