Name 4HXMDmxgYw3n7Olcko1bjSoqABFKDmABFKDm7AsVDmFTQKDmG2K7Qn_0
Workunit 2329089
Created 2 Sep 2023, 5:49:49 UTC
Sent 2 Sep 2023, 5:52:17 UTC
Report deadline 9 Sep 2023, 5:52:17 UTC
Received 2 Sep 2023, 6:35:32 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4351
Run time 42 min 55 sec
CPU time 19 min 3 sec
Validate state Valid
Credit 17.43
Device peak FLOPS 2.92 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.58 GB
Peak swap size 6.17 GB
Peak disk usage 80.14 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:52:27 (4805): wrapper (7.7.26015): starting
07:52:27 (4805): wrapper: running run_atlas (--nthreads 1)
[2023-09-02 07:52:27] Arguments: --nthreads 1
[2023-09-02 07:52:27] Threads: 1
[2023-09-02 07:52:27] Checking for CVMFS
[2023-09-02 07:52:47] Probing /cvmfs/atlas.cern.ch... OK
[2023-09-02 07:52:55] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-09-02 07:52:55] Running cvmfs_config stat atlas.cern.ch
[2023-09-02 07:52:55] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-09-02 07:52:55] 2.10.1.0 5041 0 31244 123148 3 1 3330598 4096000 0 130560 0 0 0.000 961 489 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1
[2023-09-02 07:52:55] CVMFS is ok
[2023-09-02 07:52:55] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-09-02 07:52:55] Checking for apptainer binary...
[2023-09-02 07:52:55] Using apptainer found in PATH at /usr/bin/apptainer
[2023-09-02 07:52:55] Running /usr/bin/apptainer --version
[2023-09-02 07:52:56] apptainer version 1.2.2-1.el8
[2023-09-02 07:52:56] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-09-02 07:53:01] fx8s
[2023-09-02 07:53:01] apptainer works
[2023-09-02 07:53:51] Starting ATLAS job with PandaID=5950079255
[2023-09-02 07:53:51] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-09-02 08:35:19]  *** The last 200 lines of the pilot log: ***
[2023-09-02 08:35:19] 2023-09-02 06:34:11,453 | INFO     | maximum number of monitored processes: 7
[2023-09-02 08:35:19] 2023-09-02 06:34:13,393 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-09-02 08:35:19] 2023-09-02 06:34:13,470 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-09-02 08:35:19] 2023-09-02 06:34:13,470 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2023-09-02 08:35:19] 2023-09-02 06:34:13,551 | INFO     | transferring file 6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_48958.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-5950079255/6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_
[2023-09-02 08:35:19] 2023-09-02 06:34:13,551 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-5950079255/6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_48958.1.job.log.tgz /var/lib/boinc/slots/0/6f
[2023-09-02 08:35:19] 2023-09-02 06:34:13,566 | INFO     | Adding to output.list: 6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_48958.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/d3/c5/6f5c1fa5-ba95-
[2023-09-02 08:35:19] 2023-09-02 06:34:13,567 | INFO     | summary of transferred files:
[2023-09-02 08:35:19] 2023-09-02 06:34:13,567 | INFO     |  -- lfn=6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_48958.1.job.log.tgz, status_code=0, status=transferred
[2023-09-02 08:35:19] 2023-09-02 06:34:13,567 | INFO     | stage-out finished correctly
[2023-09-02 08:35:19] 2023-09-02 06:34:13,956 | INFO     | monitor loop #274: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:13,956 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:16,459 | INFO     | monitor loop #275: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:16,459 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:16,716 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-09-02 08:35:19] 2023-09-02 06:34:18,962 | INFO     | monitor loop #276: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:18,962 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:19,584 | INFO     | job 5950079255 has state=finished
[2023-09-02 08:35:19] 2023-09-02 06:34:19,584 | INFO     | preparing for final server update for job 5950079255 in state='finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:19,585 | INFO     | this job has now completed (state=finished)
[2023-09-02 08:35:19] 2023-09-02 06:34:19,585 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-09-02 08:35:19] 2023-09-02 06:34:19,585 | INFO     | job 5950079255 has finished - writing final server update
[2023-09-02 08:35:19] 2023-09-02 06:34:19,586 | INFO     | fitting pss+swap vs Time
[2023-09-02 08:35:19] 2023-09-02 06:34:19,586 | INFO     | current memory leak: 817.55 B/s (using 22 data points, chi2=0.64)
[2023-09-02 08:35:19] 2023-09-02 06:34:19,587 | INFO     | total number of processed events: 2 (read)
[2023-09-02 08:35:19] 2023-09-02 06:34:19,588 | INFO     | executing command: lscpu
[2023-09-02 08:35:19] 2023-09-02 06:34:19,601 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-09-02 08:35:19] 2023-09-02 06:34:19,601 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-09-02 08:35:19] 2023-09-02 06:34:19,622 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-09-02 08:35:19] 2023-09-02 06:34:21,471 | INFO     | monitor loop #277: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:21,472 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:23,975 | INFO     | monitor loop #278: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:23,975 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:26,478 | INFO     | monitor loop #279: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:26,478 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:28,983 | INFO     | monitor loop #280: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:28,984 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:31,487 | INFO     | monitor loop #281: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:31,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:33,988 | INFO     | monitor loop #282: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:33,989 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:36,492 | INFO     | monitor loop #283: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:36,492 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:38,993 | INFO     | monitor loop #284: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:38,993 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:41,496 | INFO     | monitor loop #285: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:41,496 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:44,001 | INFO     | monitor loop #286: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:44,001 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:46,512 | INFO     | monitor loop #287: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:46,512 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:49,015 | INFO     | monitor loop #288: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:49,015 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:51,518 | INFO     | monitor loop #289: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:51,518 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:54,020 | INFO     | monitor loop #290: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:54,020 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:56,523 | INFO     | monitor loop #291: job 0:5950079255 is in state 'finished'
[2023-09-02 08:35:19] 2023-09-02 06:34:56,523 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-02 08:35:19] 2023-09-02 06:34:58,151 | INFO     | CPU arch script returned: x86-64-v2
[2023-09-02 08:35:19] 2023-09-02 06:34:58,151 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-5950079255/memory_monitor_summary.json (trf name=prmon)
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | extracted standard info from prmon json
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | extracted standard memory fields from prmon json
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | ..............................
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | . Timing measurements:
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | . get job = 49 s
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | . initial setup = 80 s
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | . payload setup = 58 s
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | . stage-in = 86 s
[2023-09-02 08:35:19] 2023-09-02 06:34:58,153 | INFO     | . payload execution = 1745 s
[2023-09-02 08:35:19] 2023-09-02 06:34:58,154 | INFO     | . stage-out = 307 s
[2023-09-02 08:35:19] 2023-09-02 06:34:58,154 | INFO     | ..............................
[2023-09-02 08:35:19] 2023-09-02 06:34:58,275 | INFO     | 
[2023-09-02 08:35:19] 2023-09-02 06:34:58,275 | INFO     | job summary report
[2023-09-02 08:35:19] 2023-09-02 06:34:58,275 | INFO     | --------------------------------------------------
[2023-09-02 08:35:19] 2023-09-02 06:34:58,275 | INFO     | PanDA job id: 5950079255
[2023-09-02 08:35:19] 2023-09-02 06:34:58,275 | INFO     | task id: NULL
[2023-09-02 08:35:19] 2023-09-02 06:34:58,275 | INFO     | errors: (none)
[2023-09-02 08:35:19] 2023-09-02 06:34:58,275 | INFO     | status: LOG_TRANSFER = DONE 
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | pilot state: finished 
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | transexitcode: 0
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | exeerrorcode: 0
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | exeerrordiag: 
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | exitcode: 0
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | exitmsg: OK
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | cpuconsumptiontime: 1181 s
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | nevents: 2
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | neventsw: 0
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | pid: 15832
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | pgrp: 15832
[2023-09-02 08:35:19] 2023-09-02 06:34:58,276 | INFO     | corecount: 1
[2023-09-02 08:35:19] 2023-09-02 06:34:58,277 | INFO     | event service: False
[2023-09-02 08:35:19] 2023-09-02 06:34:58,277 | INFO     | sizes: {0: 2490107, 1: 2490306, 12: 2490452, 23: 2490480, 33: 2490508, 44: 2490536, 55: 2490692, 65: 2490720, 76: 2490748, 87: 2490804, 92: 2490892, 97: 2491200, 1
[2023-09-02 08:35:19] 2023-09-02 06:34:58,277 | INFO     | --------------------------------------------------
[2023-09-02 08:35:19] 2023-09-02 06:34:58,277 | INFO     | 
[2023-09-02 08:35:19] 2023-09-02 06:34:58,277 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2023-09-02 08:35:19] 2023-09-02 06:34:58,291 | INFO     | queue jobs had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue payloads had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue data_in had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue data_out had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,292 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue completed_jobids has 1 job(s)
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,293 | INFO     | queue messages had 0 job(s) [purged]
[2023-09-02 08:35:19] 2023-09-02 06:34:58,294 | INFO     | job 5950079255 has completed (purged errors)
[2023-09-02 08:35:19] 2023-09-02 06:34:58,294 | INFO     | overall cleanup function is called
[2023-09-02 08:35:19] 2023-09-02 06:34:59,299 | INFO     | --- collectZombieJob: --- 10, [15832]
[2023-09-02 08:35:19] 2023-09-02 06:34:59,300 | INFO     | zombie collector trying to kill pid 15832
[2023-09-02 08:35:19] 2023-09-02 06:34:59,300 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-09-02 08:35:19] 2023-09-02 06:35:00,305 | INFO     | collected zombie processes
[2023-09-02 08:35:19] 2023-09-02 06:35:00,305 | INFO     | will now attempt to kill all subprocesses of pid=15832
[2023-09-02 08:35:19] 2023-09-02 06:35:00,361 | INFO     | process IDs to be killed: [15832] (in reverse order)
[2023-09-02 08:35:19] 2023-09-02 06:35:00,390 | WARNING  | found no corresponding commands to process id(s)
[2023-09-02 08:35:19] 2023-09-02 06:35:00,390 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-09-02 08:35:19] 2023-09-02 06:35:00,391 | INFO     | ready for new job
[2023-09-02 08:35:19] 2023-09-02 06:35:00,391 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-09-02 08:35:19] 2023-09-02 06:35:00,392 | INFO     | *************************************
[2023-09-02 08:35:19] 2023-09-02 06:35:00,392 | INFO     | ***  PanDA Pilot version 3.6.4.7  ***
[2023-09-02 08:35:19] 2023-09-02 06:35:00,392 | INFO     | *************************************
[2023-09-02 08:35:19] 2023-09-02 06:35:00,392 | INFO     | 
[2023-09-02 08:35:19] 2023-09-02 06:35:00,392 | INFO     | pilot is running in a VM
[2023-09-02 08:35:19] 2023-09-02 06:35:00,393 | INFO     | architecture information:
[2023-09-02 08:35:19] 2023-09-02 06:35:00,393 | INFO     | executing command: cat /etc/os-release
[2023-09-02 08:35:19] 2023-09-02 06:35:00,403 | INFO     | cat /etc/os-release:
[2023-09-02 08:35:19] NAME="CentOS Linux"
[2023-09-02 08:35:19] VERSION="7 (Core)"
[2023-09-02 08:35:19] ID="centos"
[2023-09-02 08:35:19] ID_LIKE="rhel fedora"
[2023-09-02 08:35:19] VERSION_ID="7"
[2023-09-02 08:35:19] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-09-02 08:35:19] ANSI_COLOR="0;31"
[2023-09-02 08:35:19] CPE_NAME="cpe:/o:centos:centos:7"
[2023-09-02 08:35:19] HOME_URL="https://www.centos.org/"
[2023-09-02 08:35:19] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-09-02 08:35:19] 
[2023-09-02 08:35:19] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-09-02 08:35:19] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-09-02 08:35:19] REDHAT_SUPPORT_PRODUCT="centos"
[2023-09-02 08:35:19] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-09-02 08:35:19] 
[2023-09-02 08:35:19] 2023-09-02 06:35:00,403 | INFO     | *************************************
[2023-09-02 08:35:19] 2023-09-02 06:35:00,906 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-09-02 08:35:19] 2023-09-02 06:35:00,920 | INFO     | sufficient remaining disk space (33777778688 B)
[2023-09-02 08:35:19] 2023-09-02 06:35:00,921 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-09-02 08:35:19] 2023-09-02 06:35:00,921 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-09-02 08:35:19] 2023-09-02 06:35:00,921 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-09-02 08:35:19] 2023-09-02 06:35:00,921 | INFO     | aborting loop
[2023-09-02 08:35:19] 2023-09-02 06:35:00,922 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-09-02 08:35:19] 2023-09-02 06:35:00,922 | INFO     | found 0 job(s) in 20 queues
[2023-09-02 08:35:19] 2023-09-02 06:35:00,922 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-09-02 08:35:19] 2023-09-02 06:35:00,922 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-09-02 08:35:19] 2023-09-02 06:35:01,745 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-09-02 08:35:19] 2023-09-02 06:35:01,924 | INFO     | [job] retrieve thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:01,924 | INFO     | [job] job monitor thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:02,045 | INFO     | [payload] failed_post thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:02,184 | INFO     | [job] control thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:02,220 | INFO     | [payload] control thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:02,276 | INFO     | [job] create_data_payload thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:02,276 | INFO     | [payload] validate_pre thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:02,847 | INFO     | [data] control thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:03,052 | INFO     | [payload] validate_post thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:03,214 | INFO     | [payload] execute_payloads thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:03,285 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-09-02 08:35:19] 2023-09-02 06:35:03,344 | INFO     | [job] validate thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:03,344 | INFO     | [data] copytool_in thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:03,370 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-09-02 08:35:19] 2023-09-02 06:35:03,751 | INFO     | [data] copytool_out thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:04,289 | INFO     | [job] queue monitor thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:07,375 | INFO     | [data] queue_monitor thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:11,741 | INFO     | job.realtimelogging is not enabled
[2023-09-02 08:35:19] 2023-09-02 06:35:12,746 | INFO     | [payload] run_realtimelog thread has finished
[2023-09-02 08:35:19] 2023-09-02 06:35:13,926 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139935769716544)>', '<ExcThread(monitor, started 139935487072000)>']
[2023-09-02 08:35:19] 2023-09-02 06:35:13,978 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-09-02 08:35:19] 2023-09-02 06:35:13,978 | INFO     | [monitor] control thread has ended
[2023-09-02 08:35:19] 2023-09-02 06:35:18,951 | INFO     | end of generic workflow (traces error code: 0)
[2023-09-02 08:35:19] 2023-09-02 06:35:18,951 | INFO     | traces error code: 0
[2023-09-02 08:35:19] 2023-09-02 06:35:18,951 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-09-02 08:35:19] 2023-09-02 06:35:19,015 [wrapper] ==== pilot stdout END ====
[2023-09-02 08:35:19] 2023-09-02 06:35:19,017 [wrapper] ==== wrapper stdout RESUME ====
[2023-09-02 08:35:19] 2023-09-02 06:35:19,020 [wrapper] pilotpid: 8596
[2023-09-02 08:35:19] 2023-09-02 06:35:19,022 [wrapper] Pilot exit status: 0
[2023-09-02 08:35:19] 2023-09-02 06:35:19,035 [wrapper] pandaids: 5950079255
[2023-09-02 08:35:19] 2023-09-02 06:35:19,039 [wrapper] apfmon messages muted
[2023-09-02 08:35:19] 2023-09-02 06:35:19,041 [wrapper] Test setup, not cleaning
[2023-09-02 08:35:19] 2023-09-02 06:35:19,044 [wrapper] ==== wrapper stdout END ====
[2023-09-02 08:35:19] 2023-09-02 06:35:19,046 [wrapper] ==== wrapper stderr END ====
[2023-09-02 08:35:19] 2023-09-02 06:35:19,051 [wrapper] wrapperexiting ec=0, duration=2486
[2023-09-02 08:35:19] 2023-09-02 06:35:19,053 [wrapper] apfmon messages muted
[2023-09-02 08:35:19]  *** Error codes and diagnostics ***
[2023-09-02 08:35:19]     "exeErrorCode": 0,
[2023-09-02 08:35:19]     "exeErrorDiag": "",
[2023-09-02 08:35:19]     "pilotErrorCode": 0,
[2023-09-02 08:35:19]     "pilotErrorDiag": "",
[2023-09-02 08:35:19]  *** Listing of results directory ***
[2023-09-02 08:35:19] insgesamt 45204
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc   418016  2. Sep 07:32 pilot3.tar.gz
[2023-09-02 08:35:19] -rwx------. 1 boinc boinc    27277  2. Sep 07:49 runpilot2-wrapper.sh
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc     4388  2. Sep 07:49 queuedata.json
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc      107  2. Sep 07:52 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-02 08:35:19] -rwxr-xr-x. 1 boinc boinc     7986  2. Sep 07:52 run_atlas
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc      112  2. Sep 07:52 job.xml
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc     6116  2. Sep 07:52 init_data.xml
[2023-09-02 08:35:19] -rw-r--r--. 2 boinc boinc 37708683  2. Sep 07:52 EVNT.04972714._000031.pool.root.1
[2023-09-02 08:35:19] -rw-r--r--. 2 boinc boinc    17604  2. Sep 07:52 start_atlas.sh
[2023-09-02 08:35:19] drwxrwx--x. 2 boinc boinc       68  2. Sep 07:52 shared
[2023-09-02 08:35:19] -rw-r--r--. 2 boinc boinc   428864  2. Sep 07:52 input.tar.gz
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc        0  2. Sep 07:52 boinc_lockfile
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc     2751  2. Sep 07:53 pandaJob.out
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc      424  2. Sep 07:53 setup.sh.local
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc  1390011  2. Sep 07:56 cric_ddmendpoints.json
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc  1028014  2. Sep 07:56 agis_schedconf.cvmfs.json
[2023-09-02 08:35:19] drwx------. 4 boinc boinc     4096  2. Sep 07:57 pilot3
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc  2109027  2. Sep 08:28 output.1.6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_48958.pool.root
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc      534  2. Sep 08:28 boinc_task_state.xml
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc     1016  2. Sep 08:29 memory_monitor_summary.json
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc   167717  2. Sep 08:31 6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_48958.1.job.log.tgz
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc     6649  2. Sep 08:34 heartbeat.json
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc       26  2. Sep 08:35 wrapper_checkpoint.txt
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc     8192  2. Sep 08:35 boinc_mmap_file
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc     4154  2. Sep 08:35 pilotlog.txt
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc   272384  2. Sep 08:35 6f5c1fa5-ba95-48e1-b51e-0a0267bc1559_48958.1.job.log
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc      464  2. Sep 08:35 output.list
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc      748  2. Sep 08:35 runtime_log
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc  2570240  2. Sep 08:35 result.tar.gz
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc    11802  2. Sep 08:35 runtime_log.err
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc      627  2. Sep 08:35 4HXMDmxgYw3n7Olcko1bjSoqABFKDmABFKDm7AsVDmFTQKDmG2K7Qn.diag
[2023-09-02 08:35:19] -rw-r--r--. 1 boinc boinc    22794  2. Sep 08:35 stderr.txt
[2023-09-02 08:35:19] HITS file was successfully produced:
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc 2109027  2. Sep 08:28 shared/HITS.pool.root.1
[2023-09-02 08:35:19]  *** Contents of shared directory: ***
[2023-09-02 08:35:19] insgesamt 41840
[2023-09-02 08:35:19] -rw-r--r--. 2 boinc boinc 37708683  2. Sep 07:52 ATLAS.root_0
[2023-09-02 08:35:19] -rw-r--r--. 2 boinc boinc    17604  2. Sep 07:52 start_atlas.sh
[2023-09-02 08:35:19] -rw-r--r--. 2 boinc boinc   428864  2. Sep 07:52 input.tar.gz
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc  2109027  2. Sep 08:28 HITS.pool.root.1
[2023-09-02 08:35:19] -rw-------. 1 boinc boinc  2570240  2. Sep 08:35 result.tar.gz
08:35:21 (4805): run_atlas exited; CPU time 1143.001764
08:35:21 (4805): called boinc_finish(0)

</stderr_txt>
]]>


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