Name | rCgNDm3YCx3n7Olcko1bjSoqABFKDmABFKDm7AsVDmiaQKDm1y30Zn_0 |
Workunit | 2329552 |
Created | 4 Sep 2023, 0:24:09 UTC |
Sent | 4 Sep 2023, 0:25:11 UTC |
Report deadline | 11 Sep 2023, 0:25:11 UTC |
Received | 4 Sep 2023, 1:02:45 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 1498 |
Run time | 35 min 8 sec |
CPU time | 8 min 13 sec |
Validate state | Valid |
Credit | 25.96 |
Device peak FLOPS | 13.05 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.50 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 79.95 MB |
<core_client_version>7.4.25</core_client_version> <![CDATA[ <stderr_txt> 01:26:17 (2607): wrapper (7.7.26015): starting 01:26:17 (2607): wrapper: running run_atlas (--nthreads 4) [2023-09-04 01:26:17] Arguments: --nthreads 4 [2023-09-04 01:26:17] Threads: 4 [2023-09-04 01:26:17] Checking for CVMFS [2023-09-04 01:26:22] Probing /cvmfs/atlas.cern.ch... OK [2023-09-04 01:26:28] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-09-04 01:26:28] Running cvmfs_config stat atlas.cern.ch [2023-09-04 01:26:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-09-04 01:26:28] 2.9.0.0 2829 0 24628 123178 3 1 2981629 4194304 0 130560 0 0 0.000 960 545 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1 [2023-09-04 01:26:28] CVMFS is ok [2023-09-04 01:26:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-09-04 01:26:28] Checking for apptainer binary... [2023-09-04 01:26:28] Using apptainer found in PATH at /usr/bin/apptainer [2023-09-04 01:26:28] Running /usr/bin/apptainer --version [2023-09-04 01:26:29] apptainer version 1.0.3 [2023-09-04 01:26:29] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-09-04 01:26:30] TeeC16 [2023-09-04 01:26:30] apptainer works [2023-09-04 01:26:30] Set ATHENA_PROC_NUMBER=4 [2023-09-04 01:26:30] Set ATHENA_CORE_NUMBER=4 [2023-09-04 01:26:30] Starting ATLAS job with PandaID=5951245359 [2023-09-04 01:26:30] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-09-04 02:01:21] *** The last 200 lines of the pilot log: *** [2023-09-04 02:01:21] 2023-09-04 01:00:29,288 | INFO | size of work directory /home/m/BOINC/slots/0/PanDA_Pilot-5951245359: 1129512 B (within 61362667520 B limit) [2023-09-04 02:01:21] 2023-09-04 01:00:29,288 | INFO | pfn file=/home/m/BOINC/slots/0/PanDA_Pilot-5951245359/output.1.f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.pool.root does not exist (skip from workdir size calculat [2023-09-04 02:01:21] 2023-09-04 01:00:29,289 | INFO | total size of present files: 0 B (workdir size: 1129512 B) [2023-09-04 02:01:21] 2023-09-04 01:00:29,289 | INFO | output file size check: skipping output file /home/m/BOINC/slots/0/PanDA_Pilot-5951245359/output.1.f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.pool.root since it do [2023-09-04 02:01:21] 2023-09-04 01:00:29,326 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:29,326 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:31,829 | INFO | monitor loop #263: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:31,873 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:31,874 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:34,377 | INFO | monitor loop #264: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:34,419 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:34,419 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:36,922 | INFO | monitor loop #265: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:36,964 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:36,964 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:39,468 | INFO | monitor loop #266: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:39,502 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:39,502 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:42,005 | INFO | monitor loop #267: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:42,047 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:42,047 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:44,550 | INFO | monitor loop #268: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:44,586 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:44,586 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:47,089 | INFO | monitor loop #269: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:47,132 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:47,133 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:49,610 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-09-04 02:01:21] 2023-09-04 01:00:49,636 | INFO | monitor loop #270: job 0:5951245359 is in state 'stageout' [2023-09-04 02:01:21] 2023-09-04 01:00:49,677 | INFO | number of running child processes to parent process 13783: 1 [2023-09-04 02:01:21] 2023-09-04 01:00:49,678 | INFO | maximum number of monitored processes: 7 [2023-09-04 02:01:21] 2023-09-04 01:00:49,767 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-09-04 02:01:21] 2023-09-04 01:00:49,767 | WARNING | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag [2023-09-04 02:01:21] 2023-09-04 01:00:49,816 | INFO | transferring file f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.1.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-5951245359/f4154dea-d62c-4c6c-a884-a4c140d3e9a0_7 [2023-09-04 02:01:21] 2023-09-04 01:00:49,816 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-5951245359/f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.1.job.log.tgz /home/m/BOINC/slots/0/f415 [2023-09-04 02:01:21] 2023-09-04 01:00:49,838 | INFO | Adding to output.list: f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/3f/2c/f4154dea-d62c- [2023-09-04 02:01:21] 2023-09-04 01:00:49,839 | INFO | summary of transferred files: [2023-09-04 02:01:21] 2023-09-04 01:00:49,839 | INFO | -- lfn=f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.1.job.log.tgz, status_code=0, status=transferred [2023-09-04 02:01:21] 2023-09-04 01:00:49,839 | INFO | stage-out finished correctly [2023-09-04 02:01:21] 2023-09-04 01:00:49,910 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-09-04 02:01:21] 2023-09-04 01:00:51,118 | INFO | job 5951245359 has state=finished [2023-09-04 02:01:21] 2023-09-04 01:00:51,119 | INFO | preparing for final server update for job 5951245359 in state='finished' [2023-09-04 02:01:21] 2023-09-04 01:00:51,119 | INFO | this job has now completed (state=finished) [2023-09-04 02:01:21] 2023-09-04 01:00:51,119 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-09-04 02:01:21] 2023-09-04 01:00:51,119 | INFO | job 5951245359 has finished - writing final server update [2023-09-04 02:01:21] 2023-09-04 01:00:51,121 | INFO | fitting pss+swap vs Time [2023-09-04 02:01:21] 2023-09-04 01:00:51,121 | INFO | current memory leak: 1910.85 B/s (using 15 data points, chi2=0.90) [2023-09-04 02:01:21] 2023-09-04 01:00:51,122 | INFO | total number of processed events: 2 (read) [2023-09-04 02:01:21] 2023-09-04 01:00:51,142 | INFO | executing command: lscpu [2023-09-04 02:01:21] 2023-09-04 01:00:51,162 | INFO | found 2 cores (2 cores per socket, 1 sockets) [2023-09-04 02:01:21] 2023-09-04 01:00:51,163 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-09-04 02:01:21] 2023-09-04 01:00:51,192 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-09-04 02:01:21] 2023-09-04 01:00:52,181 | INFO | monitor loop #271: job 0:5951245359 is in state 'finished' [2023-09-04 02:01:21] 2023-09-04 01:00:52,181 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-04 02:01:21] 2023-09-04 01:00:54,685 | INFO | monitor loop #272: job 0:5951245359 is in state 'finished' [2023-09-04 02:01:21] 2023-09-04 01:00:54,685 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-04 02:01:21] 2023-09-04 01:00:57,188 | INFO | monitor loop #273: job 0:5951245359 is in state 'finished' [2023-09-04 02:01:21] 2023-09-04 01:00:57,189 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-04 02:01:21] 2023-09-04 01:00:59,691 | INFO | monitor loop #274: job 0:5951245359 is in state 'finished' [2023-09-04 02:01:21] 2023-09-04 01:00:59,692 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-04 02:01:21] 2023-09-04 01:01:01,931 | INFO | CPU arch script returned: x86-64-v2 [2023-09-04 02:01:21] 2023-09-04 01:01:01,932 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5951245359/memory_monitor_summary.json (trf name=prmon) [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | extracted standard info from prmon json [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | extracted standard memory fields from prmon json [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | .............................. [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | . Timing measurements: [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | . get job = 78 s [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | . initial setup = 73 s [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | . payload setup = 115 s [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | . stage-in = 88 s [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | . payload execution = 1324 s [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | . stage-out = 301 s [2023-09-04 02:01:21] 2023-09-04 01:01:01,933 | INFO | .............................. [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | job summary report [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | -------------------------------------------------- [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | PanDA job id: 5951245359 [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | task id: NULL [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | errors: (none) [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | status: LOG_TRANSFER = DONE [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | pilot state: finished [2023-09-04 02:01:21] 2023-09-04 01:01:01,995 | INFO | transexitcode: 0 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | exeerrorcode: 0 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | exeerrordiag: [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | exitcode: 0 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | exitmsg: OK [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | cpuconsumptiontime: 511 s [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | nevents: 2 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | neventsw: 0 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | pid: 13783 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | pgrp: 13783 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | corecount: 4 [2023-09-04 02:01:21] 2023-09-04 01:01:01,996 | INFO | event service: False [2023-09-04 02:01:21] 2023-09-04 01:01:01,997 | INFO | sizes: {0: 2490278, 11: 2490424, 22: 2490452, 32: 2490480, 43: 2490508, 54: 2490536, 64: 2490692, 75: 2490748, 85: 2490776, 93: 2490864, 96: 2490892, 1442: 2511261 [2023-09-04 02:01:21] 2023-09-04 01:01:01,997 | INFO | -------------------------------------------------- [2023-09-04 02:01:21] 2023-09-04 01:01:01,997 | INFO | [2023-09-04 02:01:21] 2023-09-04 01:01:01,997 | INFO | executing command: ls -lF /home/m/BOINC/slots/0 [2023-09-04 02:01:21] 2023-09-04 01:01:02,015 | INFO | queue jobs had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,016 | INFO | queue payloads had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,016 | INFO | queue data_in had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,016 | INFO | queue data_out had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,016 | INFO | queue current_data_in had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,016 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,016 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,017 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,018 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,018 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,018 | INFO | queue completed_jobids has 1 job(s) [2023-09-04 02:01:21] 2023-09-04 01:01:02,018 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,018 | INFO | queue messages had 0 job(s) [purged] [2023-09-04 02:01:21] 2023-09-04 01:01:02,018 | INFO | job 5951245359 has completed (purged errors) [2023-09-04 02:01:21] 2023-09-04 01:01:02,018 | INFO | overall cleanup function is called [2023-09-04 02:01:21] 2023-09-04 01:01:03,025 | INFO | --- collectZombieJob: --- 10, [13783] [2023-09-04 02:01:21] 2023-09-04 01:01:03,025 | INFO | zombie collector trying to kill pid 13783 [2023-09-04 02:01:21] 2023-09-04 01:01:03,025 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-09-04 02:01:21] 2023-09-04 01:01:04,030 | INFO | collected zombie processes [2023-09-04 02:01:21] 2023-09-04 01:01:04,030 | INFO | will now attempt to kill all subprocesses of pid=13783 [2023-09-04 02:01:21] 2023-09-04 01:01:04,076 | INFO | process IDs to be killed: [13783] (in reverse order) [2023-09-04 02:01:21] 2023-09-04 01:01:04,110 | WARNING | found no corresponding commands to process id(s) [2023-09-04 02:01:21] 2023-09-04 01:01:04,110 | INFO | Do not look for orphan processes in BOINC jobs [2023-09-04 02:01:21] 2023-09-04 01:01:04,110 | INFO | ready for new job [2023-09-04 02:01:21] 2023-09-04 01:01:04,110 | INFO | pilot has finished with previous job - re-establishing logging [2023-09-04 02:01:21] 2023-09-04 01:01:04,111 | INFO | ************************************* [2023-09-04 02:01:21] 2023-09-04 01:01:04,111 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-09-04 02:01:21] 2023-09-04 01:01:04,111 | INFO | ************************************* [2023-09-04 02:01:21] 2023-09-04 01:01:04,111 | INFO | [2023-09-04 02:01:21] 2023-09-04 01:01:04,129 | INFO | architecture information: [2023-09-04 02:01:21] 2023-09-04 01:01:04,130 | INFO | executing command: cat /etc/os-release [2023-09-04 02:01:21] 2023-09-04 01:01:04,147 | INFO | cat /etc/os-release: [2023-09-04 02:01:21] NAME="CentOS Linux" [2023-09-04 02:01:21] VERSION="7 (Core)" [2023-09-04 02:01:21] ID="centos" [2023-09-04 02:01:21] ID_LIKE="rhel fedora" [2023-09-04 02:01:21] VERSION_ID="7" [2023-09-04 02:01:21] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-09-04 02:01:21] ANSI_COLOR="0;31" [2023-09-04 02:01:21] CPE_NAME="cpe:/o:centos:centos:7" [2023-09-04 02:01:21] HOME_URL="https://www.centos.org/" [2023-09-04 02:01:21] BUG_REPORT_URL="https://bugs.centos.org/" [2023-09-04 02:01:21] [2023-09-04 02:01:21] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-09-04 02:01:21] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-09-04 02:01:21] REDHAT_SUPPORT_PRODUCT="centos" [2023-09-04 02:01:21] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-09-04 02:01:21] [2023-09-04 02:01:21] 2023-09-04 01:01:04,147 | INFO | ************************************* [2023-09-04 02:01:21] 2023-09-04 01:01:04,649 | INFO | executing command: df -mP /home/m/BOINC/slots/0 [2023-09-04 02:01:21] 2023-09-04 01:01:04,667 | INFO | sufficient remaining disk space (423290208256 B) [2023-09-04 02:01:21] 2023-09-04 01:01:04,668 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-09-04 02:01:21] 2023-09-04 01:01:04,668 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-09-04 02:01:21] 2023-09-04 01:01:04,704 | WARNING | job monitor detected an abort_job request (signal=None) [2023-09-04 02:01:21] 2023-09-04 01:01:04,704 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-09-04 02:01:21] 2023-09-04 01:01:04,705 | INFO | will abort loop [2023-09-04 02:01:21] 2023-09-04 01:01:04,982 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-09-04 02:01:21] 2023-09-04 01:01:05,271 | INFO | found 0 job(s) in 20 queues [2023-09-04 02:01:21] 2023-09-04 01:01:05,272 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-09-04 02:01:21] 2023-09-04 01:01:05,272 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-09-04 02:01:21] 2023-09-04 01:01:05,421 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-09-04 02:01:21] 2023-09-04 01:01:05,673 | INFO | [job] retrieve thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:05,710 | INFO | [job] job monitor thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:05,775 | INFO | [payload] execute_payloads thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,028 | INFO | [data] control thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,206 | INFO | [payload] validate_post thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,340 | INFO | [job] control thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,432 | INFO | [data] copytool_in thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,576 | INFO | [payload] control thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,743 | INFO | [job] validate thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,867 | INFO | [job] create_data_payload thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:06,937 | INFO | [payload] failed_post thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:07,005 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-09-04 02:01:21] 2023-09-04 01:01:07,010 | INFO | [payload] validate_pre thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:07,426 | INFO | [data] copytool_out thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:08,010 | INFO | [job] queue monitor thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:08,988 | INFO | [data] queue_monitor thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:15,264 | INFO | job.realtimelogging is not enabled [2023-09-04 02:01:21] 2023-09-04 01:01:16,270 | INFO | [payload] run_realtimelog thread has finished [2023-09-04 02:01:21] 2023-09-04 01:01:16,462 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140326351386432)>', '<ExcThread(monitor, started 140325574145792)>'] [2023-09-04 02:01:21] 2023-09-04 01:01:17,332 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-09-04 02:01:21] 2023-09-04 01:01:17,333 | INFO | [monitor] control thread has ended [2023-09-04 02:01:21] 2023-09-04 01:01:21,487 | INFO | end of generic workflow (traces error code: 0) [2023-09-04 02:01:21] 2023-09-04 01:01:21,488 | INFO | traces error code: 0 [2023-09-04 02:01:21] 2023-09-04 01:01:21,488 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-09-04 02:01:21] 2023-09-04 01:01:21,542 [wrapper] ==== pilot stdout END ==== [2023-09-04 02:01:21] 2023-09-04 01:01:21,546 [wrapper] ==== wrapper stdout RESUME ==== [2023-09-04 02:01:21] 2023-09-04 01:01:21,549 [wrapper] pilotpid: 6388 [2023-09-04 02:01:21] 2023-09-04 01:01:21,553 [wrapper] Pilot exit status: 0 [2023-09-04 02:01:21] 2023-09-04 01:01:21,566 [wrapper] pandaids: 5951245359 [2023-09-04 02:01:21] 2023-09-04 01:01:21,575 [wrapper] apfmon messages muted [2023-09-04 02:01:21] 2023-09-04 01:01:21,580 [wrapper] Test setup, not cleaning [2023-09-04 02:01:21] 2023-09-04 01:01:21,585 [wrapper] ==== wrapper stdout END ==== [2023-09-04 02:01:21] 2023-09-04 01:01:21,590 [wrapper] ==== wrapper stderr END ==== [2023-09-04 02:01:21] 2023-09-04 01:01:21,599 [wrapper] wrapperexiting ec=0, duration=2091 [2023-09-04 02:01:21] 2023-09-04 01:01:21,604 [wrapper] apfmon messages muted [2023-09-04 02:01:21] *** Error codes and diagnostics *** [2023-09-04 02:01:21] "exeErrorCode": 0, [2023-09-04 02:01:21] "exeErrorDiag": "", [2023-09-04 02:01:21] "pilotErrorCode": 0, [2023-09-04 02:01:21] "pilotErrorDiag": "", [2023-09-04 02:01:21] *** Listing of results directory *** [2023-09-04 02:01:21] total 43800 [2023-09-04 02:01:21] -rw-r--r-- 1 m m 418016 Sep 4 00:42 pilot3.tar.gz [2023-09-04 02:01:21] -rw-r--r-- 1 m m 4388 Sep 4 01:21 queuedata.json [2023-09-04 02:01:21] -rwx------ 1 m m 27277 Sep 4 01:24 runpilot2-wrapper.sh [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 107 Sep 4 01:26 wrapper_26015_x86_64-pc-linux-gnu [2023-09-04 02:01:21] -rwxr-xr-x 1 m m 7986 Sep 4 01:26 run_atlas [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 112 Sep 4 01:26 job.xml [2023-09-04 02:01:21] -rw-r--r-- 2 m m 17604 Sep 4 01:26 start_atlas.sh [2023-09-04 02:01:21] drwxrwx--x 2 m m 4096 Sep 4 01:26 shared [2023-09-04 02:01:21] -rw-r--r-- 2 m m 428867 Sep 4 01:26 input.tar.gz [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 5755 Sep 4 01:26 init_data.xml [2023-09-04 02:01:21] -rw-r--r-- 2 m m 37738636 Sep 4 01:26 EVNT.04972714._000024.pool.root.1 [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 0 Sep 4 01:26 boinc_lockfile [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 2752 Sep 4 01:26 pandaJob.out [2023-09-04 02:01:21] -rw------- 1 m m 424 Sep 4 01:26 setup.sh.local [2023-09-04 02:01:21] -rw------- 1 m m 1390011 Sep 4 01:28 cric_ddmendpoints.json [2023-09-04 02:01:21] -rw------- 1 m m 1028038 Sep 4 01:28 agis_schedconf.cvmfs.json [2023-09-04 02:01:21] drwx------ 4 m m 4096 Sep 4 01:30 pilot3 [2023-09-04 02:01:21] -rw------- 1 m m 1402419 Sep 4 01:55 output.1.f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.pool.root [2023-09-04 02:01:21] -rw------- 1 m m 1021 Sep 4 01:55 memory_monitor_summary.json [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 533 Sep 4 01:55 boinc_task_state.xml [2023-09-04 02:01:21] -rw------- 1 m m 165446 Sep 4 01:58 f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.1.job.log.tgz [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 8192 Sep 4 02:00 boinc_mmap_file [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 25 Sep 4 02:00 wrapper_checkpoint.txt [2023-09-04 02:01:21] -rw------- 1 m m 6671 Sep 4 02:01 heartbeat.json [2023-09-04 02:01:21] -rw------- 1 m m 4064 Sep 4 02:01 pilotlog.txt [2023-09-04 02:01:21] -rw------- 1 m m 244325 Sep 4 02:01 f4154dea-d62c-4c6c-a884-a4c140d3e9a0_70379.1.job.log [2023-09-04 02:01:21] -rw------- 1 m m 464 Sep 4 02:01 output.list [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 748 Sep 4 02:01 runtime_log [2023-09-04 02:01:21] -rw------- 1 m m 1832960 Sep 4 02:01 result.tar.gz [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 11905 Sep 4 02:01 runtime_log.err [2023-09-04 02:01:21] -rw------- 1 m m 626 Sep 4 02:01 rCgNDm3YCx3n7Olcko1bjSoqABFKDmABFKDm7AsVDmiaQKDm1y30Zn.diag [2023-09-04 02:01:21] -rw-rw-r-- 1 m m 22726 Sep 4 02:01 stderr.txt [2023-09-04 02:01:21] HITS file was successfully produced: [2023-09-04 02:01:21] -rw------- 1 m m 1402419 Sep 4 01:55 shared/HITS.pool.root.1 [2023-09-04 02:01:21] *** Contents of shared directory: *** [2023-09-04 02:01:21] total 40460 [2023-09-04 02:01:21] -rw-r--r-- 2 m m 17604 Sep 4 01:26 start_atlas.sh [2023-09-04 02:01:21] -rw-r--r-- 2 m m 428867 Sep 4 01:26 input.tar.gz [2023-09-04 02:01:21] -rw-r--r-- 2 m m 37738636 Sep 4 01:26 ATLAS.root_0 [2023-09-04 02:01:21] -rw------- 1 m m 1402419 Sep 4 01:55 HITS.pool.root.1 [2023-09-04 02:01:21] -rw------- 1 m m 1832960 Sep 4 02:01 result.tar.gz 02:01:23 (2607): run_atlas exited; CPU time 493.242124 02:01:23 (2607): called boinc_finish(0) </stderr_txt> ]]>
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