| Name | 02tKDmpsYx3n7Olcko1bjSoqABFKDmABFKDm7AsVDmSeQKDm9dd6um_0 |
| Workunit | 2329824 |
| Created | 5 Sep 2023, 0:14:07 UTC |
| Sent | 5 Sep 2023, 0:15:45 UTC |
| Report deadline | 12 Sep 2023, 0:15:45 UTC |
| Received | 5 Sep 2023, 0:33:14 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4721 |
| Run time | 17 min 9 sec |
| CPU time | 4 min 30 sec |
| Validate state | Valid |
| Credit | 20.12 |
| Device peak FLOPS | 5.74 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.57 GB |
| Peak swap size | 2.14 GB |
| Peak disk usage | 36.44 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
02:15:55 (1981441): wrapper (7.7.26015): starting
02:15:55 (1981441): wrapper: running run_atlas (--nthreads 1)
[2023-09-05 02:15:55] Arguments: --nthreads 1
[2023-09-05 02:15:55] Threads: 1
[2023-09-05 02:15:55] Checking for CVMFS
[2023-09-05 02:15:57] Probing /cvmfs/atlas.cern.ch... OK
[2023-09-05 02:15:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-09-05 02:15:59] Running cvmfs_config stat atlas.cern.ch
[2023-09-05 02:15:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-09-05 02:15:59] 2.10.1.0 1981672 0 27404 123216 3 1 3397809 4096001 0 130560 0 0 0.000 960 2696 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-09-05 02:15:59] CVMFS is ok
[2023-09-05 02:15:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-09-05 02:15:59] Checking for apptainer binary...
[2023-09-05 02:15:59] Using apptainer found in PATH at /usr/bin/apptainer
[2023-09-05 02:15:59] Running /usr/bin/apptainer --version
[2023-09-05 02:15:59] apptainer version 1.2.2-1.el9
[2023-09-05 02:15:59] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-09-05 02:15:59] P620-CentOS9
[2023-09-05 02:15:59] apptainer works
[2023-09-05 02:15:59] Starting ATLAS job with PandaID=5952732109
[2023-09-05 02:15:59] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-09-05 02:33:01] *** The last 200 lines of the pilot log: ***
[2023-09-05 02:33:01] 2023-09-05 00:32:41,026 | INFO | pilot.util.timing | timing_report | ..............................
[2023-09-05 02:33:01] 2023-09-05 00:32:41,026 | DEBUG | pilot.control.job | add_timing_and_extracts | could have reported time_log_creation=0 s
[2023-09-05 02:33:01] 2023-09-05 00:32:41,026 | DEBUG | pilot.control.job | send_state | data={'jobId': '5952732109', 'state': 'finished', 'timestamp': '2023-09-05T02:32:35+01:00', 'siteNam
[2023-09-05 02:33:01] 2023-09-05 00:32:41,027 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5952732109', 'state': 'finished', 'timestamp': '2023-09-05T02:32:35
[2023-09-05 02:33:01] 2023-09-05 00:32:41,027 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/2/heartbeat.json
[2023-09-05 02:33:01] 2023-09-05 00:32:41,027 | DEBUG | pilot.control.job | queue_monitor | job.completed=False
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report |
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | job summary report
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | PanDA job id: 5952732109
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-09-05 02:33:01] 2023-09-05 00:32:41,078 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 271 s
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | pid: 1992417
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | pgrp: 1992417
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | corecount: 1
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | event service: False
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | sizes: {0: 2489187, 1: 2490122, 11: 2490268, 22: 2490296, 33: 2490324, 43: 2490352, 54: 2490508, 61:
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.control.job | make_job_report |
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/2:
[2023-09-05 02:33:01]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/2
[2023-09-05 02:33:01] 2023-09-05 00:32:41,079 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-05 02:33:01] 2023-09-05 00:32:41,087 | DEBUG | pilot.control.job | has_job_completed | total 42932
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 135 Sep 5 02:15 02tKDmpsYx3n7Olcko1bjSoqABFKDmABFKDm7AsVDmSeQKDm9dd6um.diag
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 520558 Sep 5 02:32 56fbc7d1-737d-4809-b04f-31d8f9df9ebe_59658.1.job.log
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 167800 Sep 5 02:29 56fbc7d1-737d-4809-b04f-31d8f9df9ebe_59658.1.job.log.tgz
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 37727106 Sep 5 02:15 EVNT.04972714._000037.pool.root.1
[2023-09-05 02:33:01] drwxrwx---. 2 boinc boinc 4096 Sep 5 02:32 PanDA_Pilot-5952732109/
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1024105 Sep 5 02:17 agis_schedconf.cvmfs.json
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 0 Sep 5 02:15 boinc_lockfile
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 8192 Sep 5 02:32 boinc_mmap_file
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 532 Sep 5 02:26 boinc_task_state.xml
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1390011 Sep 5 02:17 cric_ddmendpoints.json
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 7039 Sep 5 02:32 heartbeat.json
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 6184 Sep 5 02:15 init_data.xml
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 438828 Sep 5 02:15 input.tar.gz
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 112 Sep 5 02:15 job.xml
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1013 Sep 5 02:25 memory_monitor_summary.json
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1375819 Sep 5 02:25 output.1.56fbc7d1-737d-4809-b04f-31d8f9df9ebe_59658.pool.root
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 464 Sep 5 02:32 output.list
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 2666 Sep 5 02:15 pandaJob.out
[2023-09-05 02:33:01] drwx------. 4 boinc boinc 4096 Sep 5 02:17 pilot3/
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 428535 Sep 5 02:13 pilot3.tar.gz
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 508691 Sep 5 02:32 pilotlog.txt
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 4388 Sep 5 02:11 queuedata.json
[2023-09-05 02:33:01] -rwxr-xr-x. 1 boinc boinc 7986 Sep 5 02:15 run_atlas*
[2023-09-05 02:33:01] -rwx------. 1 boinc boinc 27275 Sep 5 02:13 runpilot2-wrapper.sh*
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 407 Sep 5 02:15 runtime_log
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 7727 Sep 5 02:15 runtime_log.err
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 424 Sep 5 02:15 setup.sh.local
[2023-09-05 02:33:01] drwxrwx--x. 2 boinc boinc 68 Sep 5 02:15 shared/
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 17632 Sep 5 02:15 start_atlas.sh
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 1645 Sep 5 02:15 stderr.txt
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 107 Sep 5 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 24 Sep 5 02:32 wrapper_checkpoint.txt
[2023-09-05 02:33:01] 2023-09-05 00:32:41,087 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,087 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,087 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,087 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,087 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.control.job | has_job_completed | job 5952732109 has completed (purged errors)
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-09-05 02:33:01] 2023-09-05 00:32:41,088 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-09-05 02:33:01] 2023-09-05 00:32:41,089 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/2/PanDA_Pilot-5952732109
[2023-09-05 02:33:01] 2023-09-05 00:32:42,094 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [1992417]
[2023-09-05 02:33:01] 2023-09-05 00:32:42,094 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 1992417
[2023-09-05 02:33:01] 2023-09-05 00:32:42,094 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-09-05 02:33:01] 2023-09-05 00:32:43,095 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-09-05 02:33:01] 2023-09-05 00:32:43,095 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=1992417
[2023-09-05 02:33:01] 2023-09-05 00:32:43,095 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-05 02:33:01] 2023-09-05 00:32:43,123 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [1992417] (in reverse order)
[2023-09-05 02:33:01] 2023-09-05 00:32:43,123 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-05 02:33:01] 2023-09-05 00:32:43,138 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-09-05 02:33:01] 2023-09-05 00:32:43,138 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-09-05 02:33:01] 2023-09-05 00:32:43,139 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 1992417
[2023-09-05 02:33:01] 2023-09-05 00:32:43,140 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 1992417
[2023-09-05 02:33:01] 2023-09-05 00:32:43,140 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-09-05 02:33:01] 2023-09-05 00:32:43,140 | INFO | pilot.control.job | retrieve | ready for new job
[2023-09-05 02:33:01] 2023-09-05 00:32:43,140 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.5.32 ***
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2023-09-05 02:33:01] 2023-09-05 00:32:43,141 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-05 02:33:01] 2023-09-05 00:32:43,147 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2023-09-05 02:33:01] NAME="CentOS Linux"
[2023-09-05 02:33:01] VERSION="7 (Core)"
[2023-09-05 02:33:01] ID="centos"
[2023-09-05 02:33:01] ID_LIKE="rhel fedora"
[2023-09-05 02:33:01] VERSION_ID="7"
[2023-09-05 02:33:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-09-05 02:33:01] ANSI_COLOR="0;31"
[2023-09-05 02:33:01] CPE_NAME="cpe:/o:centos:centos:7"
[2023-09-05 02:33:01] HOME_URL="https://www.centos.org/"
[2023-09-05 02:33:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-09-05 02:33:01]
[2023-09-05 02:33:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-09-05 02:33:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-09-05 02:33:01] REDHAT_SUPPORT_PRODUCT="centos"
[2023-09-05 02:33:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-09-05 02:33:01]
[2023-09-05 02:33:01] 2023-09-05 00:32:43,147 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-09-05 02:33:01] 2023-09-05 00:32:43,649 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/2
[2023-09-05 02:33:01] 2023-09-05 00:32:43,649 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/2
[2023-09-05 02:33:01] 2023-09-05 00:32:43,649 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-05 02:33:01] 2023-09-05 00:32:43,658 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-09-05 02:33:01] /dev/mapper/cs-root 31213 10333 20880 34% /var/lib/boinc/slots/2
[2023-09-05 02:33:01] 2023-09-05 00:32:43,658 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-09-05 02:33:01] 2023-09-05 00:32:43,658 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (21894266880 B)
[2023-09-05 02:33:01] 2023-09-05 00:32:43,658 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-09-05 02:33:01] 2023-09-05 00:32:43,658 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-09-05 02:33:01] 2023-09-05 00:32:43,658 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2023-09-05 02:33:01] 2023-09-05 00:32:43,658 | INFO | pilot.control.job | job_monitor | aborting loop
[2023-09-05 02:33:01] 2023-09-05 00:32:43,883 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-09-05 02:33:01] 2023-09-05 00:32:43,904 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-09-05 02:33:01] 2023-09-05 00:32:43,951 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues
[2023-09-05 02:33:01] 2023-09-05 00:32:43,951 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set
[2023-09-05 02:33:01] 2023-09-05 00:32:43,951 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish
[2023-09-05 02:33:01] 2023-09-05 00:32:44,289 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-09-05 02:33:01] 2023-09-05 00:32:44,678 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:44,678 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:44,710 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-09-05 02:33:01] 2023-09-05 00:32:44,840 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:44,889 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,163 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,294 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,335 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,383 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,383 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,627 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,720 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,740 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:45,909 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:46,086 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-09-05 02:33:01] 2023-09-05 00:32:46,440 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-09-05 02:33:01] 2023-09-05 00:32:47,092 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:50,446 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:53,837 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-09-05 02:33:01] 2023-09-05 00:32:53,837 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-09-05 02:33:01] 2023-09-05 00:32:53,837 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-09-05 02:33:01] 2023-09-05 00:32:54,842 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-09-05 02:33:01] 2023-09-05 00:32:56,099 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140460
[2023-09-05 02:33:01] 2023-09-05 00:32:56,099 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted
[2023-09-05 02:33:01] 2023-09-05 00:32:57,000 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring
[2023-09-05 02:33:01] 2023-09-05 00:32:57,000 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-09-05 02:33:01] 2023-09-05 00:33:01,111 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-09-05 02:33:01] 2023-09-05 00:33:01,111 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-09-05 02:33:01] 2023-09-05 00:33:01,111 | DEBUG | root | <module> | trace=<class 'pilot.workflow.generic.traces'>
[2023-09-05 02:33:01] 2023-09-05 00:33:01,132 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(1985196)-+-prmon(1998286)
[2023-09-05 02:33:01] `-pstree(2002793)
[2023-09-05 02:33:01]
[2023-09-05 02:33:01] 2023-09-05 00:33:01,132 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[1985196, 1998286, 2002793]
[2023-09-05 02:33:01] 2023-09-05 00:33:01,143 | DEBUG | pilot.util.processgroups | is_defunct | 1985196: return code=0, stdout=SN
[2023-09-05 02:33:01] , stderr=
[2023-09-05 02:33:01] 2023-09-05 00:33:01,153 | DEBUG | pilot.util.processgroups | is_defunct | 1998286: return code=0, stdout=ZN
[2023-09-05 02:33:01] , stderr=
[2023-09-05 02:33:01] 2023-09-05 00:33:01,162 | DEBUG | pilot.util.processgroups | is_defunct | 2002793: return code=1, stdout=, stderr=
[2023-09-05 02:33:01] 2023-09-05 00:33:01,162 | INFO | root | list_zombies | found these defunct processes: [1998286]
[2023-09-05 02:33:01] 2023-09-05 00:33:01,162 | INFO | root | wrap_up | traces error code: 0
[2023-09-05 02:33:01] 2023-09-05 00:33:01,162 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0)
[2023-09-05 02:33:01] 2023-09-05 00:33:01,194 [wrapper] ==== pilot stdout END ====
[2023-09-05 02:33:01] 2023-09-05 00:33:01,196 [wrapper] ==== wrapper stdout RESUME ====
[2023-09-05 02:33:01] 2023-09-05 00:33:01,196 [wrapper] pilotpid: 1985196
[2023-09-05 02:33:01] 2023-09-05 00:33:01,197 [wrapper] Pilot exit status: 0
[2023-09-05 02:33:01] 2023-09-05 00:33:01,203 [wrapper] pandaids: 5952732109
[2023-09-05 02:33:01] 2023-09-05 00:33:01,205 [wrapper] apfmon messages muted
[2023-09-05 02:33:01] 2023-09-05 00:33:01,206 [wrapper] Test setup, not cleaning
[2023-09-05 02:33:01] 2023-09-05 00:33:01,207 [wrapper] ==== wrapper stdout END ====
[2023-09-05 02:33:01] 2023-09-05 00:33:01,207 [wrapper] ==== wrapper stderr END ====
[2023-09-05 02:33:01] 2023-09-05 00:33:01,209 [wrapper] wrapperexiting ec=0, duration=1022
[2023-09-05 02:33:01] 2023-09-05 00:33:01,210 [wrapper] apfmon messages muted
[2023-09-05 02:33:01] *** Error codes and diagnostics ***
[2023-09-05 02:33:01] "exeErrorCode": 0,
[2023-09-05 02:33:01] "exeErrorDiag": "",
[2023-09-05 02:33:01] "pilotErrorCode": 0,
[2023-09-05 02:33:01] "pilotErrorDiag": "",
[2023-09-05 02:33:01] *** Listing of results directory ***
[2023-09-05 02:33:01] insgesamt 44336
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 4388 5. Sep 02:11 queuedata.json
[2023-09-05 02:33:01] -rwx------. 1 boinc boinc 27275 5. Sep 02:13 runpilot2-wrapper.sh
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 428535 5. Sep 02:13 pilot3.tar.gz
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 107 5. Sep 02:15 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-05 02:33:01] -rwxr-xr-x. 1 boinc boinc 7986 5. Sep 02:15 run_atlas
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 112 5. Sep 02:15 job.xml
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 17632 5. Sep 02:15 start_atlas.sh
[2023-09-05 02:33:01] drwxrwx--x. 2 boinc boinc 68 5. Sep 02:15 shared
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 438828 5. Sep 02:15 input.tar.gz
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 6184 5. Sep 02:15 init_data.xml
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 37727106 5. Sep 02:15 EVNT.04972714._000037.pool.root.1
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 0 5. Sep 02:15 boinc_lockfile
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 2666 5. Sep 02:15 pandaJob.out
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 424 5. Sep 02:15 setup.sh.local
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1390011 5. Sep 02:17 cric_ddmendpoints.json
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1024105 5. Sep 02:17 agis_schedconf.cvmfs.json
[2023-09-05 02:33:01] drwx------. 4 boinc boinc 4096 5. Sep 02:17 pilot3
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1375819 5. Sep 02:25 output.1.56fbc7d1-737d-4809-b04f-31d8f9df9ebe_59658.pool.root
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1013 5. Sep 02:25 memory_monitor_summary.json
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 532 5. Sep 02:26 boinc_task_state.xml
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 167800 5. Sep 02:29 56fbc7d1-737d-4809-b04f-31d8f9df9ebe_59658.1.job.log.tgz
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 7039 5. Sep 02:32 heartbeat.json
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 8192 5. Sep 02:32 boinc_mmap_file
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 25 5. Sep 02:32 wrapper_checkpoint.txt
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 9679 5. Sep 02:33 pilotlog.txt
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 538878 5. Sep 02:33 56fbc7d1-737d-4809-b04f-31d8f9df9ebe_59658.1.job.log
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 464 5. Sep 02:33 output.list
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 748 5. Sep 02:33 runtime_log
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 2099200 5. Sep 02:33 result.tar.gz
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 11850 5. Sep 02:33 runtime_log.err
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 630 5. Sep 02:33 02tKDmpsYx3n7Olcko1bjSoqABFKDmABFKDm7AsVDmSeQKDm9dd6um.diag
[2023-09-05 02:33:01] -rw-r--r--. 1 boinc boinc 28878 5. Sep 02:33 stderr.txt
[2023-09-05 02:33:01] HITS file was successfully produced:
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1375819 5. Sep 02:25 shared/HITS.pool.root.1
[2023-09-05 02:33:01] *** Contents of shared directory: ***
[2023-09-05 02:33:01] insgesamt 40692
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 17632 5. Sep 02:15 start_atlas.sh
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 438828 5. Sep 02:15 input.tar.gz
[2023-09-05 02:33:01] -rw-r--r--. 2 boinc boinc 37727106 5. Sep 02:15 ATLAS.root_0
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 1375819 5. Sep 02:25 HITS.pool.root.1
[2023-09-05 02:33:01] -rw-------. 1 boinc boinc 2099200 5. Sep 02:33 result.tar.gz
02:33:02 (1981441): run_atlas exited; CPU time 270.465328
02:33:02 (1981441): called boinc_finish(0)
</stderr_txt>
]]>
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