| Name | jsQODmAlvx3n7Olcko1bjSoqABFKDmABFKDm7AsVDmihQKDmYcApnn_0 |
| Workunit | 2330049 |
| Created | 6 Sep 2023, 0:39:46 UTC |
| Sent | 6 Sep 2023, 0:41:28 UTC |
| Report deadline | 13 Sep 2023, 0:41:28 UTC |
| Received | 6 Sep 2023, 1:09:33 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 1498 |
| Run time | 26 min 18 sec |
| CPU time | 10 min 38 sec |
| Validate state | Valid |
| Credit | 19.13 |
| Device peak FLOPS | 13.05 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.51 GB |
| Peak swap size | 2.12 GB |
| Peak disk usage | 83.31 MB |
Stderr output
<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
01:42:36 (3142): wrapper (7.7.26015): starting
01:42:36 (3142): wrapper: running run_atlas (--nthreads 4)
[2023-09-06 01:42:36] Arguments: --nthreads 4
[2023-09-06 01:42:36] Threads: 4
[2023-09-06 01:42:36] Checking for CVMFS
[2023-09-06 01:42:40] Probing /cvmfs/atlas.cern.ch... OK
[2023-09-06 01:42:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-09-06 01:42:45] Running cvmfs_config stat atlas.cern.ch
[2023-09-06 01:42:45] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-09-06 01:42:45] 2.9.0.0 3364 0 24436 123256 3 1 3871650 4194305 0 130560 0 0 0.000 960 408 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-09-06 01:42:45] CVMFS is ok
[2023-09-06 01:42:45] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-09-06 01:42:45] Checking for apptainer binary...
[2023-09-06 01:42:45] Using apptainer found in PATH at /usr/bin/apptainer
[2023-09-06 01:42:45] Running /usr/bin/apptainer --version
[2023-09-06 01:42:46] apptainer version 1.0.3
[2023-09-06 01:42:46] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-09-06 01:42:47] TeeC16
[2023-09-06 01:42:47] apptainer works
[2023-09-06 01:42:47] Set ATHENA_PROC_NUMBER=4
[2023-09-06 01:42:47] Set ATHENA_CORE_NUMBER=4
[2023-09-06 01:42:47] Starting ATLAS job with PandaID=5954564247
[2023-09-06 01:42:47] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-09-06 02:08:50] *** The last 200 lines of the pilot log: ***
[2023-09-06 02:08:50] 2023-09-06 01:07:53,401 | INFO | monitor loop #214: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:07:53,444 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:07:53,444 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:07:55,947 | INFO | monitor loop #215: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:07:55,992 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:07:55,992 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:07:58,495 | INFO | monitor loop #216: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:07:58,536 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:07:58,536 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:08:01,039 | INFO | monitor loop #217: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:08:01,079 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:08:01,080 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:08:03,583 | INFO | monitor loop #218: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:08:03,620 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:08:03,621 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:08:06,124 | INFO | monitor loop #219: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:08:06,164 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:08:06,164 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:08:08,667 | INFO | monitor loop #220: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:08:08,707 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:08:08,707 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:08:11,209 | INFO | monitor loop #221: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:08:11,252 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:08:11,253 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:08:13,756 | INFO | monitor loop #222: job 0:5954564247 is in state 'stageout'
[2023-09-06 02:08:50] 2023-09-06 01:08:13,793 | INFO | number of running child processes to parent process 14158: 1
[2023-09-06 02:08:50] 2023-09-06 01:08:13,793 | INFO | maximum number of monitored processes: 5
[2023-09-06 02:08:50] 2023-09-06 01:08:13,880 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-09-06 02:08:50] 2023-09-06 01:08:14,043 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed:
[2023-09-06 02:08:50] 2023-09-06 01:08:14,043 | WARNING | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag
[2023-09-06 02:08:50] 2023-09-06 01:08:14,090 | INFO | transferring file 6b224722-131b-421e-b870-b8a8b73b6066_66248.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-5954564247/6b224722-131b-421e-b870-b8a8b73b6066_662
[2023-09-06 02:08:50] 2023-09-06 01:08:14,090 | INFO | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-5954564247/6b224722-131b-421e-b870-b8a8b73b6066_66248.job.log.tgz /home/m/BOINC/slots/0/6b2247
[2023-09-06 02:08:50] 2023-09-06 01:08:14,110 | INFO | Adding to output.list: 6b224722-131b-421e-b870-b8a8b73b6066_66248.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/58/00/6b224722-131b-42
[2023-09-06 02:08:50] 2023-09-06 01:08:14,111 | INFO | summary of transferred files:
[2023-09-06 02:08:50] 2023-09-06 01:08:14,111 | INFO | -- lfn=6b224722-131b-421e-b870-b8a8b73b6066_66248.job.log.tgz, status_code=0, status=transferred
[2023-09-06 02:08:50] 2023-09-06 01:08:14,112 | INFO | stage-out finished correctly
[2023-09-06 02:08:50] 2023-09-06 01:08:16,296 | INFO | monitor loop #223: job 0:5954564247 is in state 'finished'
[2023-09-06 02:08:50] 2023-09-06 01:08:16,296 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-06 02:08:50] 2023-09-06 01:08:16,468 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-09-06 02:08:50] 2023-09-06 01:08:18,395 | INFO | job 5954564247 has state=finished
[2023-09-06 02:08:50] 2023-09-06 01:08:18,395 | INFO | preparing for final server update for job 5954564247 in state='finished'
[2023-09-06 02:08:50] 2023-09-06 01:08:18,396 | INFO | this job has now completed (state=finished)
[2023-09-06 02:08:50] 2023-09-06 01:08:18,396 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-09-06 02:08:50] 2023-09-06 01:08:18,396 | INFO | job 5954564247 has finished - writing final server update
[2023-09-06 02:08:50] 2023-09-06 01:08:18,397 | INFO | fitting pss+swap vs Time
[2023-09-06 02:08:50] 2023-09-06 01:08:18,398 | INFO | current memory leak: 743.38 B/s (using 8 data points, chi2=0.06)
[2023-09-06 02:08:50] 2023-09-06 01:08:18,399 | INFO | total number of processed events: 2 (read)
[2023-09-06 02:08:50] 2023-09-06 01:08:18,417 | INFO | executing command: lscpu
[2023-09-06 02:08:50] 2023-09-06 01:08:18,435 | INFO | found 2 cores (2 cores per socket, 1 sockets)
[2023-09-06 02:08:50] 2023-09-06 01:08:18,436 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-09-06 02:08:50] 2023-09-06 01:08:18,462 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-09-06 02:08:50] 2023-09-06 01:08:18,799 | INFO | monitor loop #224: job 0:5954564247 is in state 'finished'
[2023-09-06 02:08:50] 2023-09-06 01:08:18,800 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-06 02:08:50] 2023-09-06 01:08:21,303 | INFO | monitor loop #225: job 0:5954564247 is in state 'finished'
[2023-09-06 02:08:50] 2023-09-06 01:08:21,303 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-06 02:08:50] 2023-09-06 01:08:23,808 | INFO | monitor loop #226: job 0:5954564247 is in state 'finished'
[2023-09-06 02:08:50] 2023-09-06 01:08:23,808 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-06 02:08:50] 2023-09-06 01:08:26,312 | INFO | monitor loop #227: job 0:5954564247 is in state 'finished'
[2023-09-06 02:08:50] 2023-09-06 01:08:26,312 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-06 02:08:50] 2023-09-06 01:08:28,815 | INFO | monitor loop #228: job 0:5954564247 is in state 'finished'
[2023-09-06 02:08:50] 2023-09-06 01:08:28,816 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-06 02:08:50] 2023-09-06 01:08:30,503 | INFO | CPU arch script returned: x86-64-v2
[2023-09-06 02:08:50] 2023-09-06 01:08:30,503 | INFO | using path: /home/m/BOINC/slots/0/PanDA_Pilot-5954564247/memory_monitor_summary.json (trf name=prmon)
[2023-09-06 02:08:50] 2023-09-06 01:08:30,504 | INFO | extracted standard info from prmon json
[2023-09-06 02:08:50] 2023-09-06 01:08:30,504 | INFO | extracted standard memory fields from prmon json
[2023-09-06 02:08:50] 2023-09-06 01:08:30,504 | INFO | ..............................
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | . Timing measurements:
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | . get job = 67 s
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | . initial setup = 59 s
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | . payload setup = 11 s
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | . stage-in = 65 s
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | . payload execution = 870 s
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | . stage-out = 376 s
[2023-09-06 02:08:50] 2023-09-06 01:08:30,505 | INFO | ..............................
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO |
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | job summary report
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | --------------------------------------------------
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | PanDA job id: 5954564247
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | task id: NULL
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | errors: (none)
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | status: LOG_TRANSFER = DONE
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | pilot state: finished
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | transexitcode: 0
[2023-09-06 02:08:50] 2023-09-06 01:08:30,567 | INFO | exeerrorcode: 0
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | exeerrordiag:
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | exitcode: 0
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | exitmsg: OK
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | cpuconsumptiontime: 649 s
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | nevents: 2
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | neventsw: 0
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | pid: 14158
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | pgrp: 14158
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | corecount: 4
[2023-09-06 02:08:50] 2023-09-06 01:08:30,568 | INFO | event service: False
[2023-09-06 02:08:50] 2023-09-06 01:08:30,569 | INFO | sizes: {0: 2490194, 1: 2490393, 11: 2490539, 22: 2490567, 33: 2490595, 43: 2490623, 54: 2490779, 64: 2490807, 71: 2490923, 75: 2490951, 885: 2512313, 1263: 2521665
[2023-09-06 02:08:50] 2023-09-06 01:08:30,569 | INFO | --------------------------------------------------
[2023-09-06 02:08:50] 2023-09-06 01:08:30,569 | INFO |
[2023-09-06 02:08:50] 2023-09-06 01:08:30,569 | INFO | executing command: ls -lF /home/m/BOINC/slots/0
[2023-09-06 02:08:50] 2023-09-06 01:08:30,588 | INFO | queue jobs had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,589 | INFO | queue payloads had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,589 | INFO | queue data_in had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,589 | INFO | queue data_out had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,589 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,589 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,589 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,590 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,591 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,591 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,591 | INFO | queue completed_jobids has 1 job(s)
[2023-09-06 02:08:50] 2023-09-06 01:08:30,591 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,591 | INFO | queue messages had 0 job(s) [purged]
[2023-09-06 02:08:50] 2023-09-06 01:08:30,591 | INFO | job 5954564247 has completed (purged errors)
[2023-09-06 02:08:50] 2023-09-06 01:08:30,591 | INFO | overall cleanup function is called
[2023-09-06 02:08:50] 2023-09-06 01:08:31,598 | INFO | --- collectZombieJob: --- 10, [14158]
[2023-09-06 02:08:50] 2023-09-06 01:08:31,598 | INFO | zombie collector trying to kill pid 14158
[2023-09-06 02:08:50] 2023-09-06 01:08:31,599 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-09-06 02:08:50] 2023-09-06 01:08:32,604 | INFO | collected zombie processes
[2023-09-06 02:08:50] 2023-09-06 01:08:32,604 | INFO | will now attempt to kill all subprocesses of pid=14158
[2023-09-06 02:08:50] 2023-09-06 01:08:32,649 | INFO | process IDs to be killed: [14158] (in reverse order)
[2023-09-06 02:08:50] 2023-09-06 01:08:32,682 | WARNING | found no corresponding commands to process id(s)
[2023-09-06 02:08:50] 2023-09-06 01:08:32,683 | INFO | Do not look for orphan processes in BOINC jobs
[2023-09-06 02:08:50] 2023-09-06 01:08:32,683 | INFO | ready for new job
[2023-09-06 02:08:50] 2023-09-06 01:08:32,683 | INFO | pilot has finished with previous job - re-establishing logging
[2023-09-06 02:08:50] 2023-09-06 01:08:32,683 | INFO | *************************************
[2023-09-06 02:08:50] 2023-09-06 01:08:32,684 | INFO | *** PanDA Pilot version 3.6.4.7 ***
[2023-09-06 02:08:50] 2023-09-06 01:08:32,684 | INFO | *************************************
[2023-09-06 02:08:50] 2023-09-06 01:08:32,684 | INFO |
[2023-09-06 02:08:50] 2023-09-06 01:08:32,704 | INFO | architecture information:
[2023-09-06 02:08:50] 2023-09-06 01:08:32,705 | INFO | executing command: cat /etc/os-release
[2023-09-06 02:08:50] 2023-09-06 01:08:32,720 | INFO | cat /etc/os-release:
[2023-09-06 02:08:50] NAME="CentOS Linux"
[2023-09-06 02:08:50] VERSION="7 (Core)"
[2023-09-06 02:08:50] ID="centos"
[2023-09-06 02:08:50] ID_LIKE="rhel fedora"
[2023-09-06 02:08:50] VERSION_ID="7"
[2023-09-06 02:08:50] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-09-06 02:08:50] ANSI_COLOR="0;31"
[2023-09-06 02:08:50] CPE_NAME="cpe:/o:centos:centos:7"
[2023-09-06 02:08:50] HOME_URL="https://www.centos.org/"
[2023-09-06 02:08:50] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-09-06 02:08:50]
[2023-09-06 02:08:50] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-09-06 02:08:50] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-09-06 02:08:50] REDHAT_SUPPORT_PRODUCT="centos"
[2023-09-06 02:08:50] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-09-06 02:08:50]
[2023-09-06 02:08:50] 2023-09-06 01:08:32,720 | INFO | *************************************
[2023-09-06 02:08:50] 2023-09-06 01:08:33,223 | INFO | executing command: df -mP /home/m/BOINC/slots/0
[2023-09-06 02:08:50] 2023-09-06 01:08:33,241 | INFO | sufficient remaining disk space (423027015680 B)
[2023-09-06 02:08:50] 2023-09-06 01:08:33,242 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-09-06 02:08:50] 2023-09-06 01:08:33,242 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-09-06 02:08:50] 2023-09-06 01:08:33,242 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2023-09-06 02:08:50] 2023-09-06 01:08:33,242 | INFO | aborting loop
[2023-09-06 02:08:50] 2023-09-06 01:08:34,026 | INFO | found 0 job(s) in 20 queues
[2023-09-06 02:08:50] 2023-09-06 01:08:34,027 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2023-09-06 02:08:50] 2023-09-06 01:08:34,028 | WARNING | will wait for a maximum of 300 s for threads to finish
[2023-09-06 02:08:50] 2023-09-06 01:08:34,247 | INFO | [job] retrieve thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:34,248 | INFO | [job] job monitor thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:34,307 | INFO | [payload] execute_payloads thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:34,370 | INFO | [job] control thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:34,609 | INFO | [payload] control thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:34,681 | INFO | [data] control thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:34,696 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-09-06 02:08:50] 2023-09-06 01:08:35,074 | INFO | [job] validate thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:35,090 | INFO | [data] copytool_in thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:35,268 | INFO | [payload] validate_post thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:35,310 | INFO | [job] create_data_payload thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:35,430 | INFO | [payload] validate_pre thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:35,477 | INFO | [payload] failed_post thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:35,577 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-09-06 02:08:50] 2023-09-06 01:08:36,045 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-09-06 02:08:50] 2023-09-06 01:08:36,582 | INFO | [job] queue monitor thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:36,702 | INFO | [data] copytool_out thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:40,050 | INFO | [data] queue_monitor thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:44,093 | INFO | job.realtimelogging is not enabled
[2023-09-06 02:08:50] 2023-09-06 01:08:45,099 | INFO | [payload] run_realtimelog thread has finished
[2023-09-06 02:08:50] 2023-09-06 01:08:45,666 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139716448712512)>', '<ExcThread(monitor, started 139715739113216)>']
[2023-09-06 02:08:50] 2023-09-06 01:08:46,086 | WARNING | job_aborted has been set - aborting pilot monitoring
[2023-09-06 02:08:50] 2023-09-06 01:08:46,086 | INFO | [monitor] control thread has ended
[2023-09-06 02:08:50] 2023-09-06 01:08:50,692 | INFO | end of generic workflow (traces error code: 0)
[2023-09-06 02:08:50] 2023-09-06 01:08:50,693 | INFO | traces error code: 0
[2023-09-06 02:08:50] 2023-09-06 01:08:50,693 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2023-09-06 02:08:50] 2023-09-06 01:08:50,739 [wrapper] ==== pilot stdout END ====
[2023-09-06 02:08:50] 2023-09-06 01:08:50,743 [wrapper] ==== wrapper stdout RESUME ====
[2023-09-06 02:08:50] 2023-09-06 01:08:50,747 [wrapper] pilotpid: 6919
[2023-09-06 02:08:50] 2023-09-06 01:08:50,752 [wrapper] Pilot exit status: 0
[2023-09-06 02:08:50] 2023-09-06 01:08:50,762 [wrapper] pandaids: 5954564247
[2023-09-06 02:08:50] 2023-09-06 01:08:50,768 [wrapper] apfmon messages muted
[2023-09-06 02:08:50] 2023-09-06 01:08:50,771 [wrapper] Test setup, not cleaning
[2023-09-06 02:08:50] 2023-09-06 01:08:50,774 [wrapper] ==== wrapper stdout END ====
[2023-09-06 02:08:50] 2023-09-06 01:08:50,777 [wrapper] ==== wrapper stderr END ====
[2023-09-06 02:08:50] 2023-09-06 01:08:50,784 [wrapper] wrapperexiting ec=0, duration=1563
[2023-09-06 02:08:50] 2023-09-06 01:08:50,788 [wrapper] apfmon messages muted
[2023-09-06 02:08:50] *** Error codes and diagnostics ***
[2023-09-06 02:08:50] "exeErrorCode": 0,
[2023-09-06 02:08:50] "exeErrorDiag": "",
[2023-09-06 02:08:50] "pilotErrorCode": 0,
[2023-09-06 02:08:50] "pilotErrorDiag": "",
[2023-09-06 02:08:50] *** Listing of results directory ***
[2023-09-06 02:08:50] total 43908
[2023-09-06 02:08:50] -rw-r--r-- 1 m m 418016 Sep 6 01:29 pilot3.tar.gz
[2023-09-06 02:08:50] -rwx------ 1 m m 27277 Sep 6 01:39 runpilot2-wrapper.sh
[2023-09-06 02:08:50] -rw-r--r-- 1 m m 4388 Sep 6 01:39 queuedata.json
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 107 Sep 6 01:42 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-06 02:08:50] -rwxr-xr-x 1 m m 7986 Sep 6 01:42 run_atlas
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 112 Sep 6 01:42 job.xml
[2023-09-06 02:08:50] -rw-r--r-- 2 m m 17596 Sep 6 01:42 start_atlas.sh
[2023-09-06 02:08:50] drwxrwx--x 2 m m 4096 Sep 6 01:42 shared
[2023-09-06 02:08:50] -rw-r--r-- 2 m m 428869 Sep 6 01:42 input.tar.gz
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 5755 Sep 6 01:42 init_data.xml
[2023-09-06 02:08:50] -rw-r--r-- 2 m m 38971704 Sep 6 01:42 EVNT.04972714._000035.pool.root.1
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 0 Sep 6 01:42 boinc_lockfile
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 2793 Sep 6 01:42 pandaJob.out
[2023-09-06 02:08:50] -rw------- 1 m m 424 Sep 6 01:42 setup.sh.local
[2023-09-06 02:08:50] -rw------- 1 m m 1023721 Sep 6 01:43 agis_schedconf.cvmfs.json
[2023-09-06 02:08:50] -rw------- 1 m m 1390011 Sep 6 01:44 cric_ddmendpoints.json
[2023-09-06 02:08:50] drwx------ 4 m m 4096 Sep 6 01:45 pilot3
[2023-09-06 02:08:50] -rw------- 1 m m 1776952 Sep 6 02:01 Hits.hc_20274733.BOINC-TEST.6b224722-131b-421e-b870-b8a8b73b6066_66248.HITS.pool.root
[2023-09-06 02:08:50] -rw------- 1 m m 1017 Sep 6 02:01 memory_monitor_summary.json
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 533 Sep 6 02:02 boinc_task_state.xml
[2023-09-06 02:08:50] -rw------- 1 m m 162286 Sep 6 02:05 6b224722-131b-421e-b870-b8a8b73b6066_66248.job.log.tgz
[2023-09-06 02:08:50] -rw------- 1 m m 7493 Sep 6 02:08 heartbeat.json
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 8192 Sep 6 02:08 boinc_mmap_file
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 25 Sep 6 02:08 wrapper_checkpoint.txt
[2023-09-06 02:08:50] -rw------- 1 m m 3969 Sep 6 02:08 pilotlog.txt
[2023-09-06 02:08:50] -rw------- 1 m m 204272 Sep 6 02:08 6b224722-131b-421e-b870-b8a8b73b6066_66248.job.log
[2023-09-06 02:08:50] -rw------- 1 m m 510 Sep 6 02:08 output.list
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 680 Sep 6 02:08 runtime_log
[2023-09-06 02:08:50] -rw------- 1 m m 389120 Sep 6 02:08 result.tar.gz
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 11580 Sep 6 02:08 runtime_log.err
[2023-09-06 02:08:50] -rw------- 1 m m 626 Sep 6 02:08 jsQODmAlvx3n7Olcko1bjSoqABFKDmABFKDm7AsVDmihQKDmYcApnn.diag
[2023-09-06 02:08:50] -rw-rw-r-- 1 m m 22504 Sep 6 02:08 stderr.txt
[2023-09-06 02:08:50] HITS file was successfully produced:
[2023-09-06 02:08:50] -rw------- 1 m m 1776952 Sep 6 02:01 shared/HITS.pool.root.1
[2023-09-06 02:08:50] *** Contents of shared directory: ***
[2023-09-06 02:08:50] total 40616
[2023-09-06 02:08:50] -rw-r--r-- 2 m m 17596 Sep 6 01:42 start_atlas.sh
[2023-09-06 02:08:50] -rw-r--r-- 2 m m 428869 Sep 6 01:42 input.tar.gz
[2023-09-06 02:08:50] -rw-r--r-- 2 m m 38971704 Sep 6 01:42 ATLAS.root_0
[2023-09-06 02:08:50] -rw------- 1 m m 1776952 Sep 6 02:01 HITS.pool.root.1
[2023-09-06 02:08:50] -rw------- 1 m m 389120 Sep 6 02:08 result.tar.gz
02:08:52 (3142): run_atlas exited; CPU time 638.356963
02:08:52 (3142): called boinc_finish(0)
</stderr_txt>
]]>
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