| Name | 0HKKDmFY1y3n7Olcko1bjSoqABFKDmABFKDm7AsVDmBsQKDmYqIUKm_0 |
| Workunit | 2330702 |
| Created | 9 Sep 2023, 1:02:50 UTC |
| Sent | 9 Sep 2023, 1:03:28 UTC |
| Report deadline | 16 Sep 2023, 1:03:28 UTC |
| Received | 9 Sep 2023, 2:09:37 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4778 |
| Run time | 30 min 22 sec |
| CPU time | 13 min 40 sec |
| Validate state | Valid |
| Credit | 19.69 |
| Device peak FLOPS | 6.95 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.57 GB |
| Peak swap size | 2.12 GB |
| Peak disk usage | 79.79 MB |
Stderr output
<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
03:37:22 (550347): wrapper (7.7.26015): starting
03:37:22 (550347): wrapper: running run_atlas (--nthreads 3)
[2023-09-09 03:37:22] Arguments: --nthreads 3
[2023-09-09 03:37:22] Threads: 3
[2023-09-09 03:37:22] Checking for CVMFS
[2023-09-09 03:37:23] Probing /cvmfs/atlas.cern.ch... OK
[2023-09-09 03:37:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-09-09 03:37:23] Running cvmfs_config stat atlas.cern.ch
[2023-09-09 03:37:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-09-09 03:37:23] 2.11.0.0 267511 389 53600 123370 3 66 2424334 4194305 0 130560 0 1342325 99.922 77954 1257 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1
[2023-09-09 03:37:23] CVMFS is ok
[2023-09-09 03:37:23] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-09-09 03:37:23] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2023-09-09 03:37:23] Small home clusters do not require a local http proxy but it is suggested if
[2023-09-09 03:37:23] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-09-09 03:37:23] Further information can be found at the LHC@home message board.
[2023-09-09 03:37:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-09-09 03:37:23] Checking for apptainer binary...
[2023-09-09 03:37:23] apptainer is not installed, using version from CVMFS
[2023-09-09 03:37:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-09-09 03:37:24] dbgrensenh27vm
[2023-09-09 03:37:24] apptainer works
[2023-09-09 03:37:24] Set ATHENA_PROC_NUMBER=3
[2023-09-09 03:37:24] Set ATHENA_CORE_NUMBER=3
[2023-09-09 03:37:24] Starting ATLAS job with PandaID=5958096847
[2023-09-09 03:37:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-09-09 04:07:42] *** The last 200 lines of the pilot log: ***
[2023-09-09 04:07:42] 2023-09-09 02:06:46,404 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:06:48,913 | INFO | monitor loop #234: job 0:5958096847 is in state 'stageout'
[2023-09-09 04:07:42] 2023-09-09 02:06:49,028 | INFO | number of running child processes to parent process 560776: 1
[2023-09-09 04:07:42] 2023-09-09 02:06:49,028 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:06:51,534 | INFO | monitor loop #235: job 0:5958096847 is in state 'stageout'
[2023-09-09 04:07:42] 2023-09-09 02:06:51,631 | INFO | number of running child processes to parent process 560776: 1
[2023-09-09 04:07:42] 2023-09-09 02:06:51,632 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:06:54,144 | INFO | monitor loop #236: job 0:5958096847 is in state 'stageout'
[2023-09-09 04:07:42] 2023-09-09 02:06:54,227 | INFO | number of running child processes to parent process 560776: 1
[2023-09-09 04:07:42] 2023-09-09 02:06:54,227 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:06:56,738 | INFO | monitor loop #237: job 0:5958096847 is in state 'stageout'
[2023-09-09 04:07:42] 2023-09-09 02:06:56,851 | INFO | number of running child processes to parent process 560776: 1
[2023-09-09 04:07:42] 2023-09-09 02:06:56,851 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:06:59,369 | INFO | monitor loop #238: job 0:5958096847 is in state 'stageout'
[2023-09-09 04:07:42] 2023-09-09 02:06:59,493 | INFO | number of running child processes to parent process 560776: 1
[2023-09-09 04:07:42] 2023-09-09 02:06:59,493 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:07:01,998 | INFO | monitor loop #239: job 0:5958096847 is in state 'stageout'
[2023-09-09 04:07:42] 2023-09-09 02:07:02,087 | INFO | number of running child processes to parent process 560776: 1
[2023-09-09 04:07:42] 2023-09-09 02:07:02,088 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:07:04,595 | INFO | monitor loop #240: job 0:5958096847 is in state 'stageout'
[2023-09-09 04:07:42] 2023-09-09 02:07:04,677 | INFO | number of running child processes to parent process 560776: 1
[2023-09-09 04:07:42] 2023-09-09 02:07:04,678 | INFO | maximum number of monitored processes: 7
[2023-09-09 04:07:42] 2023-09-09 02:07:05,873 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-09-09 04:07:42] 2023-09-09 02:07:05,987 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed:
[2023-09-09 04:07:42] 2023-09-09 02:07:05,987 | WARNING | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis
[2023-09-09 04:07:42] 2023-09-09 02:07:06,046 | INFO | transferring file 6f0a4c0b-43c4-4edb-bfdd-ae8d09863066_806.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5958096847/6f0a4c0b-43c4-4edb-bfdd-ae8d0986
[2023-09-09 04:07:42] 2023-09-09 02:07:06,047 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5958096847/6f0a4c0b-43c4-4edb-bfdd-ae8d09863066_806.1.job.log.tgz /var/lib/boinc-clien
[2023-09-09 04:07:42] 2023-09-09 02:07:06,120 | INFO | Adding to output.list: 6f0a4c0b-43c4-4edb-bfdd-ae8d09863066_806.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/40/ed/6f0a4c0b-43c4-4e
[2023-09-09 04:07:42] 2023-09-09 02:07:06,121 | INFO | summary of transferred files:
[2023-09-09 04:07:42] 2023-09-09 02:07:06,122 | INFO | -- lfn=6f0a4c0b-43c4-4edb-bfdd-ae8d09863066_806.1.job.log.tgz, status_code=0, status=transferred
[2023-09-09 04:07:42] 2023-09-09 02:07:06,122 | INFO | stage-out finished correctly
[2023-09-09 04:07:42] 2023-09-09 02:07:06,203 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-09-09 04:07:42] 2023-09-09 02:07:07,197 | INFO | monitor loop #241: job 0:5958096847 is in state 'finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:07,197 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-09 04:07:42] 2023-09-09 02:07:07,317 | INFO | job 5958096847 has state=finished
[2023-09-09 04:07:42] 2023-09-09 02:07:07,318 | INFO | preparing for final server update for job 5958096847 in state='finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:07,318 | INFO | this job has now completed (state=finished)
[2023-09-09 04:07:42] 2023-09-09 02:07:07,318 | INFO | pilot will not update the server (heartbeat message will be written to file)
[2023-09-09 04:07:42] 2023-09-09 02:07:07,318 | INFO | job 5958096847 has finished - writing final server update
[2023-09-09 04:07:42] 2023-09-09 02:07:07,320 | INFO | fitting pss+swap vs Time
[2023-09-09 04:07:42] 2023-09-09 02:07:07,321 | INFO | current memory leak: 1325.89 B/s (using 12 data points, chi2=0.25)
[2023-09-09 04:07:42] 2023-09-09 02:07:07,321 | INFO | total number of processed events: 2 (read)
[2023-09-09 04:07:42] 2023-09-09 02:07:07,327 | INFO | executing command: lscpu
[2023-09-09 04:07:42] 2023-09-09 02:07:07,368 | INFO | found 6 cores (6 cores per socket, 1 sockets)
[2023-09-09 04:07:42] 2023-09-09 02:07:07,368 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-09-09 04:07:42] 2023-09-09 02:07:07,465 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-09-09 04:07:42] 2023-09-09 02:07:09,709 | INFO | monitor loop #242: job 0:5958096847 is in state 'finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:09,709 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-09 04:07:42] 2023-09-09 02:07:12,213 | INFO | monitor loop #243: job 0:5958096847 is in state 'finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:12,214 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-09 04:07:42] 2023-09-09 02:07:14,722 | INFO | monitor loop #244: job 0:5958096847 is in state 'finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:14,722 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-09 04:07:42] 2023-09-09 02:07:17,229 | INFO | monitor loop #245: job 0:5958096847 is in state 'finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:17,229 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-09 04:07:42] 2023-09-09 02:07:19,734 | INFO | monitor loop #246: job 0:5958096847 is in state 'finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:19,734 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-09 04:07:42] 2023-09-09 02:07:22,238 | INFO | monitor loop #247: job 0:5958096847 is in state 'finished'
[2023-09-09 04:07:42] 2023-09-09 02:07:22,238 | INFO | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-09 04:07:42] 2023-09-09 02:07:22,476 | INFO | CPU arch script returned: x86-64-v2
[2023-09-09 04:07:42] 2023-09-09 02:07:22,476 | INFO | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-5958096847/memory_monitor_summary.json (trf name=prmon)
[2023-09-09 04:07:42] 2023-09-09 02:07:22,477 | INFO | extracted standard info from prmon json
[2023-09-09 04:07:42] 2023-09-09 02:07:22,477 | INFO | extracted standard memory fields from prmon json
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | ..............................
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | . Timing measurements:
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | . get job = 74 s
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | . initial setup = 55 s
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | . payload setup = 42 s
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | . stage-in = 46 s
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | . payload execution = 1165 s
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | . stage-out = 344 s
[2023-09-09 04:07:42] 2023-09-09 02:07:22,478 | INFO | ..............................
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO |
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | job summary report
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | --------------------------------------------------
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | PanDA job id: 5958096847
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | task id: NULL
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | errors: (none)
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | status: LOG_TRANSFER = DONE
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | pilot state: finished
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | transexitcode: 0
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | exeerrorcode: 0
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | exeerrordiag:
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | exitcode: 0
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | exitmsg: OK
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | cpuconsumptiontime: 981 s
[2023-09-09 04:07:42] 2023-09-09 02:07:22,558 | INFO | nevents: 2
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | neventsw: 0
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | pid: 560776
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | pgrp: 560776
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | corecount: 3
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | event service: False
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | sizes: {0: 2489368, 1: 2490303, 12: 2490303, 22: 2490477, 33: 2490505, 43: 2490533, 54: 2490689, 58: 2490777, 65: 2490805, 1211: 2510851, 1212: 2510850, 1557: 2520
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | --------------------------------------------------
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO |
[2023-09-09 04:07:42] 2023-09-09 02:07:22,559 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/1
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue jobs had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue payloads had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue data_in had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue data_out had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue current_data_in had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue validated_jobs had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue validated_payloads had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue monitored_payloads had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue finished_jobs had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,616 | INFO | queue finished_payloads had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue finished_data_in had 1 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue finished_data_out had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue failed_jobs had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue failed_payloads had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue failed_data_in had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue failed_data_out had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue completed_jobs had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue completed_jobids has 1 job(s)
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue realtimelog_payloads had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | queue messages had 0 job(s) [purged]
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | job 5958096847 has completed (purged errors)
[2023-09-09 04:07:42] 2023-09-09 02:07:22,617 | INFO | overall cleanup function is called
[2023-09-09 04:07:42] 2023-09-09 02:07:23,625 | INFO | --- collectZombieJob: --- 10, [560776]
[2023-09-09 04:07:42] 2023-09-09 02:07:23,626 | INFO | zombie collector trying to kill pid 560776
[2023-09-09 04:07:42] 2023-09-09 02:07:23,626 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-09-09 04:07:42] 2023-09-09 02:07:23,662 | INFO | 1780s have passed since pilot start
[2023-09-09 04:07:42] 2023-09-09 02:07:24,636 | INFO | collected zombie processes
[2023-09-09 04:07:42] 2023-09-09 02:07:24,636 | INFO | will now attempt to kill all subprocesses of pid=560776
[2023-09-09 04:07:42] 2023-09-09 02:07:24,761 | INFO | process IDs to be killed: [560776] (in reverse order)
[2023-09-09 04:07:42] 2023-09-09 02:07:24,854 | WARNING | found no corresponding commands to process id(s)
[2023-09-09 04:07:42] 2023-09-09 02:07:24,855 | INFO | Do not look for orphan processes in BOINC jobs
[2023-09-09 04:07:42] 2023-09-09 02:07:24,855 | INFO | ready for new job
[2023-09-09 04:07:42] 2023-09-09 02:07:24,856 | INFO | pilot has finished with previous job - re-establishing logging
[2023-09-09 04:07:42] 2023-09-09 02:07:24,856 | INFO | *************************************
[2023-09-09 04:07:42] 2023-09-09 02:07:24,857 | INFO | *** PanDA Pilot version 3.6.4.7 ***
[2023-09-09 04:07:42] 2023-09-09 02:07:24,857 | INFO | *************************************
[2023-09-09 04:07:42] 2023-09-09 02:07:24,857 | INFO |
[2023-09-09 04:07:42] 2023-09-09 02:07:24,857 | INFO | pilot is running in a VM
[2023-09-09 04:07:42] 2023-09-09 02:07:24,857 | INFO | architecture information:
[2023-09-09 04:07:42] 2023-09-09 02:07:24,859 | INFO | executing command: cat /etc/os-release
[2023-09-09 04:07:42] 2023-09-09 02:07:24,894 | INFO | cat /etc/os-release:
[2023-09-09 04:07:42] NAME="CentOS Linux"
[2023-09-09 04:07:42] VERSION="7 (Core)"
[2023-09-09 04:07:42] ID="centos"
[2023-09-09 04:07:42] ID_LIKE="rhel fedora"
[2023-09-09 04:07:42] VERSION_ID="7"
[2023-09-09 04:07:42] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-09-09 04:07:42] ANSI_COLOR="0;31"
[2023-09-09 04:07:42] CPE_NAME="cpe:/o:centos:centos:7"
[2023-09-09 04:07:42] HOME_URL="https://www.centos.org/"
[2023-09-09 04:07:42] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-09-09 04:07:42]
[2023-09-09 04:07:42] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-09-09 04:07:42] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-09-09 04:07:42] REDHAT_SUPPORT_PRODUCT="centos"
[2023-09-09 04:07:42] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-09-09 04:07:42]
[2023-09-09 04:07:42] 2023-09-09 02:07:24,894 | INFO | *************************************
[2023-09-09 04:07:42] 2023-09-09 02:07:25,398 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1
[2023-09-09 04:07:42] 2023-09-09 02:07:25,460 | INFO | sufficient remaining disk space (37717278720 B)
[2023-09-09 04:07:42] 2023-09-09 02:07:25,460 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job
[2023-09-09 04:07:42] 2023-09-09 02:07:25,460 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-09-09 04:07:42] 2023-09-09 02:07:25,461 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-09-09 04:07:42] 2023-09-09 02:07:25,461 | INFO | found 0 job(s) in 20 queues
[2023-09-09 04:07:42] 2023-09-09 02:07:25,462 | WARNING | pilot monitor received instruction that args.graceful_stop has been set
[2023-09-09 04:07:42] 2023-09-09 02:07:25,462 | WARNING | will wait for a maximum of 300 s for threads to finish
[2023-09-09 04:07:42] 2023-09-09 02:07:25,747 | WARNING | job:job_monitor:received graceful stop - abort after this iteration
[2023-09-09 04:07:42] 2023-09-09 02:07:25,748 | INFO | aborting loop
[2023-09-09 04:07:42] 2023-09-09 02:07:25,841 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-09-09 04:07:42] 2023-09-09 02:07:26,464 | INFO | [job] retrieve thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:26,468 | INFO | [payload] control thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:26,750 | INFO | [payload] execute_payloads thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:26,751 | INFO | [job] job monitor thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:26,764 | WARNING | data:copytool_out:received graceful stop - abort after this iteration
[2023-09-09 04:07:42] 2023-09-09 02:07:26,872 | INFO | [data] control thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:27,209 | INFO | [job] control thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:27,337 | INFO | [job] create_data_payload thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:27,583 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration
[2023-09-09 04:07:42] 2023-09-09 02:07:27,654 | INFO | [payload] failed_post thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:27,740 | INFO | [data] copytool_in thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:27,748 | INFO | [job] validate thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:27,845 | INFO | [payload] validate_pre thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:27,859 | INFO | [payload] validate_post thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:28,591 | INFO | [job] queue monitor thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:28,769 | INFO | [data] copytool_out thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:29,855 | INFO | [data] queue_monitor thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:36,400 | INFO | job.realtimelogging is not enabled
[2023-09-09 04:07:42] 2023-09-09 02:07:37,407 | INFO | [payload] run_realtimelog thread has finished
[2023-09-09 04:07:42] 2023-09-09 02:07:37,510 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140329232127808)>', '<ExcThread(monitor, started 140328476579584)>']
[2023-09-09 04:07:42] 2023-09-09 02:07:37,571 | WARNING | job_aborted has been set - aborting pilot monitoring
[2023-09-09 04:07:42] 2023-09-09 02:07:37,571 | INFO | [monitor] control thread has ended
[2023-09-09 04:07:42] 2023-09-09 02:07:42,529 | INFO | end of generic workflow (traces error code: 0)
[2023-09-09 04:07:42] 2023-09-09 02:07:42,529 | INFO | traces error code: 0
[2023-09-09 04:07:42] 2023-09-09 02:07:42,530 | INFO | pilot has finished (exit code=0, shell exit code=0)
[2023-09-09 04:07:42] 2023-09-09 02:07:42,601 [wrapper] ==== pilot stdout END ====
[2023-09-09 04:07:42] 2023-09-09 02:07:42,611 [wrapper] ==== wrapper stdout RESUME ====
[2023-09-09 04:07:42] 2023-09-09 02:07:42,619 [wrapper] pilotpid: 553513
[2023-09-09 04:07:42] 2023-09-09 02:07:42,628 [wrapper] Pilot exit status: 0
[2023-09-09 04:07:42] 2023-09-09 02:07:42,696 [wrapper] pandaids: 5958096847
[2023-09-09 04:07:42] 2023-09-09 02:07:42,716 [wrapper] apfmon messages muted
[2023-09-09 04:07:42] 2023-09-09 02:07:42,724 [wrapper] Test setup, not cleaning
[2023-09-09 04:07:42] 2023-09-09 02:07:42,730 [wrapper] ==== wrapper stdout END ====
[2023-09-09 04:07:42] 2023-09-09 02:07:42,739 [wrapper] ==== wrapper stderr END ====
[2023-09-09 04:07:42] 2023-09-09 02:07:42,759 [wrapper] wrapperexiting ec=0, duration=1817
[2023-09-09 04:07:42] 2023-09-09 02:07:42,766 [wrapper] apfmon messages muted
[2023-09-09 04:07:42] *** Error codes and diagnostics ***
[2023-09-09 04:07:43] "exeErrorCode": 0,
[2023-09-09 04:07:43] "exeErrorDiag": "",
[2023-09-09 04:07:43] "pilotErrorCode": 0,
[2023-09-09 04:07:43] "pilotErrorDiag": "",
[2023-09-09 04:07:43] *** Listing of results directory ***
[2023-09-09 04:07:43] total 44944
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 418016 sep 9 02:33 pilot3.tar.gz
[2023-09-09 04:07:43] -rwx------ 1 boinc boinc 27275 sep 9 03:02 runpilot2-wrapper.sh
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 4388 sep 9 03:02 queuedata.json
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 107 sep 9 03:37 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-09 04:07:43] -rwxr-xr-x 1 boinc boinc 7986 sep 9 03:37 run_atlas
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 112 sep 9 03:37 job.xml
[2023-09-09 04:07:43] -rw-r--r-- 2 boinc boinc 17616 sep 9 03:37 start_atlas.sh
[2023-09-09 04:07:43] drwxrwx--x 2 boinc boinc 4096 sep 9 03:37 shared
[2023-09-09 04:07:43] -rw-r--r-- 2 boinc boinc 428862 sep 9 03:37 input.tar.gz
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 6835 sep 9 03:37 init_data.xml
[2023-09-09 04:07:43] -rw-r--r-- 2 boinc boinc 37658468 sep 9 03:37 EVNT.04972714._000029.pool.root.1
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 0 sep 9 03:37 boinc_lockfile
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 2745 sep 9 03:37 pandaJob.out
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 424 sep 9 03:37 setup.sh.local
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 1023780 sep 9 03:37 agis_schedconf.cvmfs.json
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 1389912 sep 9 03:38 cric_ddmendpoints.json
[2023-09-09 04:07:43] drwx------ 4 boinc boinc 4096 sep 9 03:39 pilot3
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 2054601 sep 9 04:01 output.1.6f0a4c0b-43c4-4edb-bfdd-ae8d09863066_806.pool.root
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 1005 sep 9 04:01 memory_monitor_summary.json
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 533 sep 9 04:01 boinc_task_state.xml
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 161607 sep 9 04:04 6f0a4c0b-43c4-4edb-bfdd-ae8d09863066_806.1.job.log.tgz
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 6650 sep 9 04:07 heartbeat.json
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 8192 sep 9 04:07 boinc_mmap_file
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 25 sep 9 04:07 wrapper_checkpoint.txt
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 4161 sep 9 04:07 pilotlog.txt
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 226971 sep 9 04:07 6f0a4c0b-43c4-4edb-bfdd-ae8d09863066_806.1.job.log
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 456 sep 9 04:07 output.list
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 740 sep 9 04:07 runtime_log
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 2457600 sep 9 04:07 result.tar.gz
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 12063 sep 9 04:07 runtime_log.err
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 636 sep 9 04:07 0HKKDmFY1y3n7Olcko1bjSoqABFKDmABFKDm7AsVDmBsQKDmYqIUKm.diag
[2023-09-09 04:07:43] -rw-r--r-- 1 boinc boinc 23096 sep 9 04:07 stderr.txt
[2023-09-09 04:07:43] HITS file was successfully produced:
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 2054601 sep 9 04:01 shared/HITS.pool.root.1
[2023-09-09 04:07:43] *** Contents of shared directory: ***
[2023-09-09 04:07:43] total 41624
[2023-09-09 04:07:43] -rw-r--r-- 2 boinc boinc 17616 sep 9 03:37 start_atlas.sh
[2023-09-09 04:07:43] -rw-r--r-- 2 boinc boinc 428862 sep 9 03:37 input.tar.gz
[2023-09-09 04:07:43] -rw-r--r-- 2 boinc boinc 37658468 sep 9 03:37 ATLAS.root_0
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 2054601 sep 9 04:01 HITS.pool.root.1
[2023-09-09 04:07:43] -rw------- 1 boinc boinc 2457600 sep 9 04:07 result.tar.gz
04:07:44 (550347): run_atlas exited; CPU time 820.005222
04:07:44 (550347): called boinc_finish(0)
</stderr_txt>
]]>
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