Name | 2lGNDmKDfz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmXzQKDm8eWiFm_0 |
Workunit | 2331014 |
Created | 10 Sep 2023, 19:23:54 UTC |
Sent | 10 Sep 2023, 19:25:48 UTC |
Report deadline | 17 Sep 2023, 19:25:48 UTC |
Received | 10 Sep 2023, 20:47:35 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4778 |
Run time | 27 min 11 sec |
CPU time | 10 min 35 sec |
Validate state | Valid |
Credit | 19.99 |
Device peak FLOPS | 6.95 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.57 GB |
Peak swap size | 8.00 GB |
Peak disk usage | 81.41 MB |
<core_client_version>7.20.5</core_client_version> <![CDATA[ <stderr_txt> 22:18:06 (2513910): wrapper (7.7.26015): starting 22:18:06 (2513910): wrapper: running run_atlas (--nthreads 3) [2023-09-10 22:18:06] Arguments: --nthreads 3 [2023-09-10 22:18:06] Threads: 3 [2023-09-10 22:18:06] Checking for CVMFS [2023-09-10 22:18:06] Probing /cvmfs/atlas.cern.ch... OK [2023-09-10 22:18:07] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-09-10 22:18:07] Running cvmfs_config stat atlas.cern.ch [2023-09-10 22:18:07] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-09-10 22:18:07] 2.11.0.0 2269933 283 57064 123433 0 14 3027708 4194304 0 130560 0 1053068 99.998 32127 3163 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1 [2023-09-10 22:18:07] CVMFS is ok [2023-09-10 22:18:07] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-09-10 22:18:07] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2023-09-10 22:18:07] Small home clusters do not require a local http proxy but it is suggested if [2023-09-10 22:18:07] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-09-10 22:18:07] Further information can be found at the LHC@home message board. [2023-09-10 22:18:07] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-09-10 22:18:07] Checking for apptainer binary... [2023-09-10 22:18:07] apptainer is not installed, using version from CVMFS [2023-09-10 22:18:07] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-09-10 22:18:08] dbgrensenh27vm [2023-09-10 22:18:08] apptainer works [2023-09-10 22:18:08] Set ATHENA_PROC_NUMBER=3 [2023-09-10 22:18:08] Set ATHENA_CORE_NUMBER=3 [2023-09-10 22:18:08] Starting ATLAS job with PandaID=5959491883 [2023-09-10 22:18:08] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-09-10 22:45:15] *** The last 200 lines of the pilot log: *** [2023-09-10 22:45:15] 2023-09-10 20:44:17,654 | INFO | monitor loop #201: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:17,758 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:17,758 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:20,269 | INFO | monitor loop #202: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:20,354 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:20,354 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:22,865 | INFO | monitor loop #203: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:22,969 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:22,969 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:25,479 | INFO | monitor loop #204: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:25,570 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:25,571 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:28,075 | INFO | monitor loop #205: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:28,180 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:28,180 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:30,691 | INFO | monitor loop #206: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:30,779 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:30,779 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:33,289 | INFO | monitor loop #207: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:33,369 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:33,369 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:35,875 | INFO | monitor loop #208: job 0:5959491883 is in state 'stageout' [2023-09-10 22:45:15] 2023-09-10 20:44:35,983 | INFO | number of running child processes to parent process 2524395: 1 [2023-09-10 22:45:15] 2023-09-10 20:44:35,983 | INFO | maximum number of monitored processes: 8 [2023-09-10 22:45:15] 2023-09-10 20:44:37,078 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-09-10 22:45:15] 2023-09-10 20:44:37,176 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-09-10 22:45:15] 2023-09-10 20:44:37,176 | WARNING | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis [2023-09-10 22:45:15] 2023-09-10 20:44:37,221 | INFO | transferring file 50af0ad2-6c56-48ac-aeab-a6beb1ff5251_39591.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5959491883/50af0ad2-6c56-48ac-aeab-a6beb1 [2023-09-10 22:45:15] 2023-09-10 20:44:37,222 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5959491883/50af0ad2-6c56-48ac-aeab-a6beb1ff5251_39591.1.job.log.tgz /var/lib/boinc-cli [2023-09-10 22:45:15] 2023-09-10 20:44:37,272 | INFO | Adding to output.list: 50af0ad2-6c56-48ac-aeab-a6beb1ff5251_39591.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/80/cb/50af0ad2-6c56- [2023-09-10 22:45:15] 2023-09-10 20:44:37,272 | INFO | summary of transferred files: [2023-09-10 22:45:15] 2023-09-10 20:44:37,272 | INFO | -- lfn=50af0ad2-6c56-48ac-aeab-a6beb1ff5251_39591.1.job.log.tgz, status_code=0, status=transferred [2023-09-10 22:45:15] 2023-09-10 20:44:37,273 | INFO | stage-out finished correctly [2023-09-10 22:45:15] 2023-09-10 20:44:37,387 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-09-10 22:45:15] 2023-09-10 20:44:38,488 | INFO | monitor loop #209: job 0:5959491883 is in state 'finished' [2023-09-10 22:45:15] 2023-09-10 20:44:38,488 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 22:45:15] 2023-09-10 20:44:38,892 | INFO | job 5959491883 has state=finished [2023-09-10 22:45:15] 2023-09-10 20:44:38,892 | INFO | preparing for final server update for job 5959491883 in state='finished' [2023-09-10 22:45:15] 2023-09-10 20:44:38,892 | INFO | this job has now completed (state=finished) [2023-09-10 22:45:15] 2023-09-10 20:44:38,892 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-09-10 22:45:15] 2023-09-10 20:44:38,892 | INFO | job 5959491883 has finished - writing final server update [2023-09-10 22:45:15] 2023-09-10 20:44:38,893 | INFO | fitting pss+swap vs Time [2023-09-10 22:45:15] 2023-09-10 20:44:38,893 | INFO | current memory leak: 1961.10 B/s (using 10 data points, chi2=0.16) [2023-09-10 22:45:15] 2023-09-10 20:44:38,894 | INFO | total number of processed events: 2 (read) [2023-09-10 22:45:15] 2023-09-10 20:44:38,899 | INFO | executing command: lscpu [2023-09-10 22:45:15] 2023-09-10 20:44:38,942 | INFO | found 6 cores (6 cores per socket, 1 sockets) [2023-09-10 22:45:15] 2023-09-10 20:44:38,943 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-09-10 22:45:15] 2023-09-10 20:44:39,052 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-09-10 22:45:15] 2023-09-10 20:44:40,994 | INFO | monitor loop #210: job 0:5959491883 is in state 'finished' [2023-09-10 22:45:15] 2023-09-10 20:44:40,995 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 22:45:15] 2023-09-10 20:44:43,499 | INFO | monitor loop #211: job 0:5959491883 is in state 'finished' [2023-09-10 22:45:15] 2023-09-10 20:44:43,499 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 22:45:15] 2023-09-10 20:44:46,003 | INFO | monitor loop #212: job 0:5959491883 is in state 'finished' [2023-09-10 22:45:15] 2023-09-10 20:44:46,004 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 22:45:15] 2023-09-10 20:44:48,511 | INFO | monitor loop #213: job 0:5959491883 is in state 'finished' [2023-09-10 22:45:15] 2023-09-10 20:44:48,511 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 22:45:15] 2023-09-10 20:44:51,022 | INFO | monitor loop #214: job 0:5959491883 is in state 'finished' [2023-09-10 22:45:15] 2023-09-10 20:44:51,023 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 22:45:15] 2023-09-10 20:44:53,528 | INFO | monitor loop #215: job 0:5959491883 is in state 'finished' [2023-09-10 22:45:15] 2023-09-10 20:44:53,528 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 22:45:15] 2023-09-10 20:44:53,961 | INFO | CPU arch script returned: x86-64-v2 [2023-09-10 22:45:15] 2023-09-10 20:44:53,962 | INFO | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-5959491883/memory_monitor_summary.json (trf name=prmon) [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | extracted standard info from prmon json [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | extracted standard memory fields from prmon json [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | .............................. [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | . Timing measurements: [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | . get job = 76 s [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | . initial setup = 65 s [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | . payload setup = 42 s [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | . stage-in = 41 s [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | . payload execution = 1024 s [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | . stage-out = 294 s [2023-09-10 22:45:15] 2023-09-10 20:44:53,963 | INFO | .............................. [2023-09-10 22:45:15] 2023-09-10 20:44:54,523 | INFO | [2023-09-10 22:45:15] 2023-09-10 20:44:54,523 | INFO | job summary report [2023-09-10 22:45:15] 2023-09-10 20:44:54,523 | INFO | -------------------------------------------------- [2023-09-10 22:45:15] 2023-09-10 20:44:54,523 | INFO | PanDA job id: 5959491883 [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | task id: NULL [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | errors: (none) [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | status: LOG_TRANSFER = DONE [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | pilot state: finished [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | transexitcode: 0 [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | exeerrorcode: 0 [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | exeerrordiag: [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | exitcode: 0 [2023-09-10 22:45:15] 2023-09-10 20:44:54,524 | INFO | exitmsg: OK [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | cpuconsumptiontime: 778 s [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | nevents: 2 [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | neventsw: 0 [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | pid: 2524395 [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | pgrp: 2524395 [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | corecount: 3 [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | event service: False [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | sizes: {0: 2490121, 1: 2490149, 11: 2490320, 22: 2490494, 33: 2490522, 43: 2490550, 53: 2490766, 54: 2490794, 1070: 2513527, 1365: 2522879, 1382: 2523045} [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | -------------------------------------------------- [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | [2023-09-10 22:45:15] 2023-09-10 20:44:54,525 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/1 [2023-09-10 22:45:15] 2023-09-10 20:44:54,589 | INFO | queue jobs had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue payloads had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue data_in had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue data_out had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue current_data_in had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,590 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | queue completed_jobids has 1 job(s) [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | queue messages had 0 job(s) [purged] [2023-09-10 22:45:15] 2023-09-10 20:44:54,591 | INFO | job 5959491883 has completed (purged errors) [2023-09-10 22:45:15] 2023-09-10 20:44:54,592 | INFO | overall cleanup function is called [2023-09-10 22:45:15] 2023-09-10 20:44:55,599 | INFO | --- collectZombieJob: --- 10, [2524395] [2023-09-10 22:45:15] 2023-09-10 20:44:55,599 | INFO | zombie collector trying to kill pid 2524395 [2023-09-10 22:45:15] 2023-09-10 20:44:55,599 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-09-10 22:45:15] 2023-09-10 20:44:56,606 | INFO | collected zombie processes [2023-09-10 22:45:15] 2023-09-10 20:44:56,606 | INFO | will now attempt to kill all subprocesses of pid=2524395 [2023-09-10 22:45:15] 2023-09-10 20:44:56,719 | INFO | process IDs to be killed: [2524395] (in reverse order) [2023-09-10 22:45:15] 2023-09-10 20:44:56,814 | WARNING | found no corresponding commands to process id(s) [2023-09-10 22:45:15] 2023-09-10 20:44:56,814 | INFO | Do not look for orphan processes in BOINC jobs [2023-09-10 22:45:15] 2023-09-10 20:44:56,814 | INFO | ready for new job [2023-09-10 22:45:15] 2023-09-10 20:44:56,814 | INFO | pilot has finished with previous job - re-establishing logging [2023-09-10 22:45:15] 2023-09-10 20:44:56,815 | INFO | ************************************* [2023-09-10 22:45:15] 2023-09-10 20:44:56,815 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-09-10 22:45:15] 2023-09-10 20:44:56,815 | INFO | ************************************* [2023-09-10 22:45:15] 2023-09-10 20:44:56,815 | INFO | [2023-09-10 22:45:15] 2023-09-10 20:44:56,816 | INFO | pilot is running in a VM [2023-09-10 22:45:15] 2023-09-10 20:44:56,816 | INFO | architecture information: [2023-09-10 22:45:15] 2023-09-10 20:44:56,818 | INFO | executing command: cat /etc/os-release [2023-09-10 22:45:15] 2023-09-10 20:44:56,861 | INFO | cat /etc/os-release: [2023-09-10 22:45:15] NAME="CentOS Linux" [2023-09-10 22:45:15] VERSION="7 (Core)" [2023-09-10 22:45:15] ID="centos" [2023-09-10 22:45:15] ID_LIKE="rhel fedora" [2023-09-10 22:45:15] VERSION_ID="7" [2023-09-10 22:45:15] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-09-10 22:45:15] ANSI_COLOR="0;31" [2023-09-10 22:45:15] CPE_NAME="cpe:/o:centos:centos:7" [2023-09-10 22:45:15] HOME_URL="https://www.centos.org/" [2023-09-10 22:45:15] BUG_REPORT_URL="https://bugs.centos.org/" [2023-09-10 22:45:15] [2023-09-10 22:45:15] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-09-10 22:45:15] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-09-10 22:45:15] REDHAT_SUPPORT_PRODUCT="centos" [2023-09-10 22:45:15] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-09-10 22:45:15] [2023-09-10 22:45:15] 2023-09-10 20:44:56,862 | INFO | ************************************* [2023-09-10 22:45:15] 2023-09-10 20:44:57,367 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1 [2023-09-10 22:45:15] 2023-09-10 20:44:57,401 | INFO | sufficient remaining disk space (37160484864 B) [2023-09-10 22:45:15] 2023-09-10 20:44:57,401 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-09-10 22:45:15] 2023-09-10 20:44:57,401 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-09-10 22:45:15] 2023-09-10 20:44:57,401 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-09-10 22:45:15] 2023-09-10 20:44:57,402 | INFO | aborting loop [2023-09-10 22:45:15] 2023-09-10 20:44:57,402 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-09-10 22:45:15] 2023-09-10 20:44:57,887 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-09-10 22:45:15] 2023-09-10 20:44:58,172 | INFO | found 0 job(s) in 20 queues [2023-09-10 22:45:15] 2023-09-10 20:44:58,172 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-09-10 22:45:15] 2023-09-10 20:44:58,172 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-09-10 22:45:15] 2023-09-10 20:44:58,407 | INFO | [job] retrieve thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:58,408 | INFO | [job] job monitor thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:58,986 | INFO | [job] control thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,033 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-09-10 22:45:15] 2023-09-10 20:44:59,053 | INFO | [payload] execute_payloads thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,142 | INFO | [payload] failed_post thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,240 | INFO | [job] create_data_payload thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,241 | INFO | [payload] validate_pre thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,242 | INFO | [job] validate thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,289 | INFO | [data] copytool_in thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,415 | INFO | [data] control thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,740 | INFO | [payload] validate_post thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,900 | INFO | [data] copytool_out thread has finished [2023-09-10 22:45:15] 2023-09-10 20:44:59,915 | INFO | [payload] control thread has finished [2023-09-10 22:45:15] 2023-09-10 20:45:00,050 | INFO | [job] queue monitor thread has finished [2023-09-10 22:45:15] 2023-09-10 20:45:01,418 | INFO | [data] queue_monitor thread has finished [2023-09-10 22:45:15] 2023-09-10 20:45:08,049 | INFO | job.realtimelogging is not enabled [2023-09-10 22:45:15] 2023-09-10 20:45:09,053 | INFO | [payload] run_realtimelog thread has finished [2023-09-10 22:45:15] 2023-09-10 20:45:09,504 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140169747056448)>', '<ExcThread(monitor, started 140168740730624)>'] [2023-09-10 22:45:15] 2023-09-10 20:45:10,240 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-09-10 22:45:15] 2023-09-10 20:45:10,240 | INFO | [monitor] control thread has ended [2023-09-10 22:45:15] 2023-09-10 20:45:14,533 | INFO | end of generic workflow (traces error code: 0) [2023-09-10 22:45:15] 2023-09-10 20:45:14,533 | INFO | traces error code: 0 [2023-09-10 22:45:15] 2023-09-10 20:45:14,533 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-09-10 22:45:15] 2023-09-10 20:45:14,638 [wrapper] ==== pilot stdout END ==== [2023-09-10 22:45:15] 2023-09-10 20:45:14,652 [wrapper] ==== wrapper stdout RESUME ==== [2023-09-10 22:45:15] 2023-09-10 20:45:14,661 [wrapper] pilotpid: 2517077 [2023-09-10 22:45:15] 2023-09-10 20:45:14,670 [wrapper] Pilot exit status: 0 [2023-09-10 22:45:15] 2023-09-10 20:45:14,706 [wrapper] pandaids: 5959491883 [2023-09-10 22:45:15] 2023-09-10 20:45:14,726 [wrapper] apfmon messages muted [2023-09-10 22:45:15] 2023-09-10 20:45:14,733 [wrapper] Test setup, not cleaning [2023-09-10 22:45:15] 2023-09-10 20:45:14,741 [wrapper] ==== wrapper stdout END ==== [2023-09-10 22:45:15] 2023-09-10 20:45:14,753 [wrapper] ==== wrapper stderr END ==== [2023-09-10 22:45:15] 2023-09-10 20:45:14,773 [wrapper] wrapperexiting ec=0, duration=1625 [2023-09-10 22:45:15] 2023-09-10 20:45:14,787 [wrapper] apfmon messages muted [2023-09-10 22:45:15] *** Error codes and diagnostics *** [2023-09-10 22:45:15] "exeErrorCode": 0, [2023-09-10 22:45:15] "exeErrorDiag": "", [2023-09-10 22:45:15] "pilotErrorCode": 0, [2023-09-10 22:45:15] "pilotErrorDiag": "", [2023-09-10 22:45:15] *** Listing of results directory *** [2023-09-10 22:45:15] total 44740 [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 418016 sep 10 20:26 pilot3.tar.gz [2023-09-10 22:45:15] -rwx------ 1 boinc boinc 27277 sep 10 21:23 runpilot2-wrapper.sh [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 4388 sep 10 21:23 queuedata.json [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 107 sep 10 22:18 wrapper_26015_x86_64-pc-linux-gnu [2023-09-10 22:45:15] -rwxr-xr-x 1 boinc boinc 7986 sep 10 22:18 run_atlas [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 112 sep 10 22:18 job.xml [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 6838 sep 10 22:18 init_data.xml [2023-09-10 22:45:15] -rw-r--r-- 2 boinc boinc 37965264 sep 10 22:18 EVNT.04972714._000027.pool.root.1 [2023-09-10 22:45:15] -rw-r--r-- 2 boinc boinc 17604 sep 10 22:18 start_atlas.sh [2023-09-10 22:45:15] drwxrwx--x 2 boinc boinc 4096 sep 10 22:18 shared [2023-09-10 22:45:15] -rw-r--r-- 2 boinc boinc 428861 sep 10 22:18 input.tar.gz [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 0 sep 10 22:18 boinc_lockfile [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 2756 sep 10 22:18 pandaJob.out [2023-09-10 22:45:15] -rw------- 1 boinc boinc 424 sep 10 22:18 setup.sh.local [2023-09-10 22:45:15] -rw------- 1 boinc boinc 1389912 sep 10 22:19 cric_ddmendpoints.json [2023-09-10 22:45:15] -rw------- 1 boinc boinc 1022644 sep 10 22:19 agis_schedconf.cvmfs.json [2023-09-10 22:45:15] drwx------ 4 boinc boinc 4096 sep 10 22:20 pilot3 [2023-09-10 22:45:15] -rw------- 1 boinc boinc 1808625 sep 10 22:39 output.1.50af0ad2-6c56-48ac-aeab-a6beb1ff5251_39591.pool.root [2023-09-10 22:45:15] -rw------- 1 boinc boinc 1004 sep 10 22:39 memory_monitor_summary.json [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 533 sep 10 22:39 boinc_task_state.xml [2023-09-10 22:45:15] -rw------- 1 boinc boinc 160897 sep 10 22:42 50af0ad2-6c56-48ac-aeab-a6beb1ff5251_39591.1.job.log.tgz [2023-09-10 22:45:15] -rw------- 1 boinc boinc 8716 sep 10 22:44 heartbeat.json [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 8192 sep 10 22:45 boinc_mmap_file [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 25 sep 10 22:45 wrapper_checkpoint.txt [2023-09-10 22:45:15] -rw------- 1 boinc boinc 4038 sep 10 22:45 pilotlog.txt [2023-09-10 22:45:15] -rw------- 1 boinc boinc 208388 sep 10 22:45 50af0ad2-6c56-48ac-aeab-a6beb1ff5251_39591.1.job.log [2023-09-10 22:45:15] -rw------- 1 boinc boinc 464 sep 10 22:45 output.list [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 748 sep 10 22:45 runtime_log [2023-09-10 22:45:15] -rw------- 1 boinc boinc 2201600 sep 10 22:45 result.tar.gz [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 12125 sep 10 22:45 runtime_log.err [2023-09-10 22:45:15] -rw------- 1 boinc boinc 636 sep 10 22:45 2lGNDmKDfz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmXzQKDm8eWiFm.diag [2023-09-10 22:45:15] -rw-r--r-- 1 boinc boinc 23106 sep 10 22:45 stderr.txt [2023-09-10 22:45:15] HITS file was successfully produced: [2023-09-10 22:45:15] -rw------- 1 boinc boinc 1808625 sep 10 22:39 shared/HITS.pool.root.1 [2023-09-10 22:45:15] *** Contents of shared directory: *** [2023-09-10 22:45:15] total 41440 [2023-09-10 22:45:15] -rw-r--r-- 2 boinc boinc 37965264 sep 10 22:18 ATLAS.root_0 [2023-09-10 22:45:15] -rw-r--r-- 2 boinc boinc 17604 sep 10 22:18 start_atlas.sh [2023-09-10 22:45:15] -rw-r--r-- 2 boinc boinc 428861 sep 10 22:18 input.tar.gz [2023-09-10 22:45:15] -rw------- 1 boinc boinc 1808625 sep 10 22:39 HITS.pool.root.1 [2023-09-10 22:45:15] -rw------- 1 boinc boinc 2201600 sep 10 22:45 result.tar.gz 22:45:16 (2513910): run_atlas exited; CPU time 635.882196 22:45:16 (2513910): called boinc_finish(0) </stderr_txt> ]]>
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