Name | thsKDmStfz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmgzQKDmTlW1Jm_0 |
Workunit | 2331021 |
Created | 10 Sep 2023, 20:07:25 UTC |
Sent | 10 Sep 2023, 20:08:02 UTC |
Report deadline | 17 Sep 2023, 20:08:02 UTC |
Received | 10 Sep 2023, 21:41:54 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4778 |
Run time | 26 min 22 sec |
CPU time | 8 min 4 sec |
Validate state | Valid |
Credit | 19.42 |
Device peak FLOPS | 6.95 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.56 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 78.69 MB |
<core_client_version>7.20.5</core_client_version> <![CDATA[ <stderr_txt> 23:13:27 (2560050): wrapper (7.7.26015): starting 23:13:27 (2560050): wrapper: running run_atlas (--nthreads 3) [2023-09-10 23:13:27] Arguments: --nthreads 3 [2023-09-10 23:13:27] Threads: 3 [2023-09-10 23:13:27] Checking for CVMFS [2023-09-10 23:13:27] Probing /cvmfs/atlas.cern.ch... OK [2023-09-10 23:13:27] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-09-10 23:13:27] Running cvmfs_config stat atlas.cern.ch [2023-09-10 23:13:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-09-10 23:13:28] 2.11.0.0 2269933 338 56660 123433 1 73 3031255 4194305 0 130560 0 1264453 99.998 32206 2943 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1 [2023-09-10 23:13:28] CVMFS is ok [2023-09-10 23:13:28] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-09-10 23:13:28] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2023-09-10 23:13:28] Small home clusters do not require a local http proxy but it is suggested if [2023-09-10 23:13:28] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-09-10 23:13:28] Further information can be found at the LHC@home message board. [2023-09-10 23:13:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-09-10 23:13:28] Checking for apptainer binary... [2023-09-10 23:13:28] apptainer is not installed, using version from CVMFS [2023-09-10 23:13:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-09-10 23:13:28] dbgrensenh27vm [2023-09-10 23:13:28] apptainer works [2023-09-10 23:13:28] Set ATHENA_PROC_NUMBER=3 [2023-09-10 23:13:28] Set ATHENA_CORE_NUMBER=3 [2023-09-10 23:13:28] Starting ATLAS job with PandaID=5959513081 [2023-09-10 23:13:28] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-09-10 23:39:46] *** The last 200 lines of the pilot log: *** [2023-09-10 23:39:46] 2023-09-10 21:38:54,549 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1 [2023-09-10 23:39:46] 2023-09-10 21:38:54,596 | INFO | sufficient remaining disk space (37065064448 B) [2023-09-10 23:39:46] 2023-09-10 21:38:54,597 | INFO | work directory size check will use 61362667520 B as a max limit (10% grace limit added) [2023-09-10 23:39:46] 2023-09-10 21:38:54,597 | INFO | size of work directory /var/lib/boinc-client/slots/1/PanDA_Pilot-5959513081: 1121610 B (within 61362667520 B limit) [2023-09-10 23:39:46] 2023-09-10 21:38:54,597 | INFO | pfn file=/var/lib/boinc-client/slots/1/PanDA_Pilot-5959513081/Hits.hc_20275052.BOINC-TEST.0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.HITS.pool.root does not exist [2023-09-10 23:39:46] 2023-09-10 21:38:54,597 | INFO | total size of present files: 0 B (workdir size: 1121610 B) [2023-09-10 23:39:46] 2023-09-10 21:38:54,598 | INFO | output file size check: skipping output file /var/lib/boinc-client/slots/1/PanDA_Pilot-5959513081/Hits.hc_20275052.BOINC-TEST.0b696d78-9f90-493d-b2b0-389bae0ea7ca_ [2023-09-10 23:39:46] 2023-09-10 21:38:54,708 | INFO | number of running child processes to parent process 2570492: 1 [2023-09-10 23:39:46] 2023-09-10 21:38:54,708 | INFO | maximum number of monitored processes: 8 [2023-09-10 23:39:46] 2023-09-10 21:38:57,227 | INFO | monitor loop #238: job 0:5959513081 is in state 'stageout' [2023-09-10 23:39:46] 2023-09-10 21:38:57,312 | INFO | number of running child processes to parent process 2570492: 1 [2023-09-10 23:39:46] 2023-09-10 21:38:57,312 | INFO | maximum number of monitored processes: 8 [2023-09-10 23:39:46] 2023-09-10 21:38:59,823 | INFO | monitor loop #239: job 0:5959513081 is in state 'stageout' [2023-09-10 23:39:46] 2023-09-10 21:38:59,966 | INFO | number of running child processes to parent process 2570492: 1 [2023-09-10 23:39:46] 2023-09-10 21:38:59,966 | INFO | maximum number of monitored processes: 8 [2023-09-10 23:39:46] 2023-09-10 21:39:02,476 | INFO | monitor loop #240: job 0:5959513081 is in state 'stageout' [2023-09-10 23:39:46] 2023-09-10 21:39:02,582 | INFO | number of running child processes to parent process 2570492: 1 [2023-09-10 23:39:46] 2023-09-10 21:39:02,583 | INFO | maximum number of monitored processes: 8 [2023-09-10 23:39:46] 2023-09-10 21:39:05,099 | INFO | monitor loop #241: job 0:5959513081 is in state 'stageout' [2023-09-10 23:39:46] 2023-09-10 21:39:05,213 | INFO | number of running child processes to parent process 2570492: 1 [2023-09-10 23:39:46] 2023-09-10 21:39:05,214 | INFO | maximum number of monitored processes: 8 [2023-09-10 23:39:46] 2023-09-10 21:39:07,745 | INFO | monitor loop #242: job 0:5959513081 is in state 'stageout' [2023-09-10 23:39:46] 2023-09-10 21:39:07,862 | INFO | number of running child processes to parent process 2570492: 1 [2023-09-10 23:39:46] 2023-09-10 21:39:07,862 | INFO | maximum number of monitored processes: 8 [2023-09-10 23:39:46] 2023-09-10 21:39:09,708 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-09-10 23:39:46] 2023-09-10 21:39:09,770 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-09-10 23:39:46] 2023-09-10 21:39:09,770 | WARNING | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis [2023-09-10 23:39:46] 2023-09-10 21:39:09,811 | INFO | transferring file 0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5959513081/0b696d78-9f90-493d-b2b0-389bae0e [2023-09-10 23:39:46] 2023-09-10 21:39:09,811 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5959513081/0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.job.log.tgz /var/lib/boinc-clien [2023-09-10 23:39:46] 2023-09-10 21:39:09,854 | INFO | Adding to output.list: 0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/18/e6/0b696d78-9f90-49 [2023-09-10 23:39:46] 2023-09-10 21:39:09,856 | INFO | summary of transferred files: [2023-09-10 23:39:46] 2023-09-10 21:39:09,856 | INFO | -- lfn=0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.job.log.tgz, status_code=0, status=transferred [2023-09-10 23:39:46] 2023-09-10 21:39:09,856 | INFO | stage-out finished correctly [2023-09-10 23:39:46] 2023-09-10 21:39:09,940 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-09-10 23:39:46] 2023-09-10 21:39:10,004 | INFO | job 5959513081 has state=finished [2023-09-10 23:39:46] 2023-09-10 21:39:10,004 | INFO | preparing for final server update for job 5959513081 in state='finished' [2023-09-10 23:39:46] 2023-09-10 21:39:10,005 | INFO | this job has now completed (state=finished) [2023-09-10 23:39:46] 2023-09-10 21:39:10,006 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-09-10 23:39:46] 2023-09-10 21:39:10,006 | INFO | job 5959513081 has finished - writing final server update [2023-09-10 23:39:46] 2023-09-10 21:39:10,007 | WARNING | wrong length of table data, x=[1694380996.0, 1694381057.0, 1694381118.0, 1694381179.0, 1694381240.0, 1694381301.0, 1694381362.0], y=[765572.0, 887496.0, 1081876.0, [2023-09-10 23:39:46] 2023-09-10 21:39:10,008 | INFO | total number of processed events: 2 (read) [2023-09-10 23:39:46] 2023-09-10 21:39:10,014 | INFO | executing command: lscpu [2023-09-10 23:39:46] 2023-09-10 21:39:10,055 | INFO | found 6 cores (6 cores per socket, 1 sockets) [2023-09-10 23:39:46] 2023-09-10 21:39:10,055 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-09-10 23:39:46] 2023-09-10 21:39:10,146 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-09-10 23:39:46] 2023-09-10 21:39:10,379 | INFO | monitor loop #243: job 0:5959513081 is in state 'finished' [2023-09-10 23:39:46] 2023-09-10 21:39:10,379 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 23:39:46] 2023-09-10 21:39:12,887 | INFO | monitor loop #244: job 0:5959513081 is in state 'finished' [2023-09-10 23:39:46] 2023-09-10 21:39:12,887 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 23:39:46] 2023-09-10 21:39:15,390 | INFO | monitor loop #245: job 0:5959513081 is in state 'finished' [2023-09-10 23:39:46] 2023-09-10 21:39:15,391 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 23:39:46] 2023-09-10 21:39:17,898 | INFO | monitor loop #246: job 0:5959513081 is in state 'finished' [2023-09-10 23:39:46] 2023-09-10 21:39:17,898 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 23:39:46] 2023-09-10 21:39:20,402 | INFO | monitor loop #247: job 0:5959513081 is in state 'finished' [2023-09-10 23:39:46] 2023-09-10 21:39:20,402 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 23:39:46] 2023-09-10 21:39:20,631 | INFO | 1533s have passed since pilot start [2023-09-10 23:39:46] 2023-09-10 21:39:22,903 | INFO | monitor loop #248: job 0:5959513081 is in state 'finished' [2023-09-10 23:39:46] 2023-09-10 21:39:22,904 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-10 23:39:46] 2023-09-10 21:39:24,917 | INFO | CPU arch script returned: x86-64-v2 [2023-09-10 23:39:46] 2023-09-10 21:39:24,917 | INFO | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-5959513081/memory_monitor_summary.json (trf name=prmon) [2023-09-10 23:39:46] 2023-09-10 21:39:24,918 | INFO | extracted standard info from prmon json [2023-09-10 23:39:46] 2023-09-10 21:39:24,918 | INFO | extracted standard memory fields from prmon json [2023-09-10 23:39:46] 2023-09-10 21:39:24,918 | INFO | .............................. [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | . Timing measurements: [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | . get job = 63 s [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | . initial setup = 55 s [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | . payload setup = 43 s [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | . stage-in = 49 s [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | . payload execution = 867 s [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | . stage-out = 412 s [2023-09-10 23:39:46] 2023-09-10 21:39:24,919 | INFO | .............................. [2023-09-10 23:39:46] 2023-09-10 21:39:24,983 | INFO | [2023-09-10 23:39:46] 2023-09-10 21:39:24,983 | INFO | job summary report [2023-09-10 23:39:46] 2023-09-10 21:39:24,983 | INFO | -------------------------------------------------- [2023-09-10 23:39:46] 2023-09-10 21:39:24,984 | INFO | PanDA job id: 5959513081 [2023-09-10 23:39:46] 2023-09-10 21:39:24,984 | INFO | task id: NULL [2023-09-10 23:39:46] 2023-09-10 21:39:24,984 | INFO | errors: (none) [2023-09-10 23:39:46] 2023-09-10 21:39:24,984 | INFO | status: LOG_TRANSFER = DONE [2023-09-10 23:39:46] 2023-09-10 21:39:24,984 | INFO | pilot state: finished [2023-09-10 23:39:46] 2023-09-10 21:39:24,984 | INFO | transexitcode: 0 [2023-09-10 23:39:46] 2023-09-10 21:39:24,985 | INFO | exeerrorcode: 0 [2023-09-10 23:39:46] 2023-09-10 21:39:24,985 | INFO | exeerrordiag: [2023-09-10 23:39:46] 2023-09-10 21:39:24,985 | INFO | exitcode: 0 [2023-09-10 23:39:46] 2023-09-10 21:39:24,985 | INFO | exitmsg: OK [2023-09-10 23:39:46] 2023-09-10 21:39:24,986 | INFO | cpuconsumptiontime: 616 s [2023-09-10 23:39:46] 2023-09-10 21:39:24,987 | INFO | nevents: 2 [2023-09-10 23:39:46] 2023-09-10 21:39:24,987 | INFO | neventsw: 0 [2023-09-10 23:39:46] 2023-09-10 21:39:24,988 | INFO | pid: 2570492 [2023-09-10 23:39:46] 2023-09-10 21:39:24,988 | INFO | pgrp: 2570492 [2023-09-10 23:39:46] 2023-09-10 21:39:24,988 | INFO | corecount: 3 [2023-09-10 23:39:46] 2023-09-10 21:39:24,988 | INFO | event service: False [2023-09-10 23:39:46] 2023-09-10 21:39:24,988 | INFO | sizes: {0: 2488867, 1: 2490410, 12: 2490556, 22: 2490584, 33: 2490612, 43: 2490640, 54: 2490796, 60: 2490884, 65: 2490912, 914: 2510685, 1329: 2520417, 1344: 25205 [2023-09-10 23:39:46] 2023-09-10 21:39:24,988 | INFO | -------------------------------------------------- [2023-09-10 23:39:46] 2023-09-10 21:39:24,988 | INFO | [2023-09-10 23:39:46] 2023-09-10 21:39:24,989 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/1 [2023-09-10 23:39:46] 2023-09-10 21:39:25,086 | INFO | queue jobs had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,087 | INFO | queue payloads had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,089 | INFO | queue data_in had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,089 | INFO | queue data_out had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,090 | INFO | queue current_data_in had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,091 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,092 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,092 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,092 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,092 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,092 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,092 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,092 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | queue completed_jobids has 1 job(s) [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | queue messages had 0 job(s) [purged] [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | job 5959513081 has completed (purged errors) [2023-09-10 23:39:46] 2023-09-10 21:39:25,093 | INFO | overall cleanup function is called [2023-09-10 23:39:46] 2023-09-10 21:39:26,115 | INFO | --- collectZombieJob: --- 10, [2570492] [2023-09-10 23:39:46] 2023-09-10 21:39:26,115 | INFO | zombie collector trying to kill pid 2570492 [2023-09-10 23:39:46] 2023-09-10 21:39:26,115 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-09-10 23:39:46] 2023-09-10 21:39:27,123 | INFO | collected zombie processes [2023-09-10 23:39:46] 2023-09-10 21:39:27,123 | INFO | will now attempt to kill all subprocesses of pid=2570492 [2023-09-10 23:39:46] 2023-09-10 21:39:27,228 | INFO | process IDs to be killed: [2570492] (in reverse order) [2023-09-10 23:39:46] 2023-09-10 21:39:27,320 | WARNING | found no corresponding commands to process id(s) [2023-09-10 23:39:46] 2023-09-10 21:39:27,321 | INFO | Do not look for orphan processes in BOINC jobs [2023-09-10 23:39:46] 2023-09-10 21:39:27,321 | INFO | ready for new job [2023-09-10 23:39:46] 2023-09-10 21:39:27,321 | INFO | pilot has finished with previous job - re-establishing logging [2023-09-10 23:39:46] 2023-09-10 21:39:27,322 | INFO | ************************************* [2023-09-10 23:39:46] 2023-09-10 21:39:27,322 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-09-10 23:39:46] 2023-09-10 21:39:27,322 | INFO | ************************************* [2023-09-10 23:39:46] 2023-09-10 21:39:27,322 | INFO | [2023-09-10 23:39:46] 2023-09-10 21:39:27,322 | INFO | pilot is running in a VM [2023-09-10 23:39:46] 2023-09-10 21:39:27,322 | INFO | architecture information: [2023-09-10 23:39:46] 2023-09-10 21:39:27,324 | INFO | executing command: cat /etc/os-release [2023-09-10 23:39:46] 2023-09-10 21:39:27,352 | INFO | cat /etc/os-release: [2023-09-10 23:39:46] NAME="CentOS Linux" [2023-09-10 23:39:46] VERSION="7 (Core)" [2023-09-10 23:39:46] ID="centos" [2023-09-10 23:39:46] ID_LIKE="rhel fedora" [2023-09-10 23:39:46] VERSION_ID="7" [2023-09-10 23:39:46] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-09-10 23:39:46] ANSI_COLOR="0;31" [2023-09-10 23:39:46] CPE_NAME="cpe:/o:centos:centos:7" [2023-09-10 23:39:46] HOME_URL="https://www.centos.org/" [2023-09-10 23:39:46] BUG_REPORT_URL="https://bugs.centos.org/" [2023-09-10 23:39:46] [2023-09-10 23:39:46] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-09-10 23:39:46] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-09-10 23:39:46] REDHAT_SUPPORT_PRODUCT="centos" [2023-09-10 23:39:46] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-09-10 23:39:46] [2023-09-10 23:39:46] 2023-09-10 21:39:27,352 | INFO | ************************************* [2023-09-10 23:39:46] 2023-09-10 21:39:27,869 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1 [2023-09-10 23:39:46] 2023-09-10 21:39:27,899 | INFO | sufficient remaining disk space (37064015872 B) [2023-09-10 23:39:46] 2023-09-10 21:39:27,900 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-09-10 23:39:46] 2023-09-10 21:39:27,900 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-09-10 23:39:46] 2023-09-10 21:39:27,901 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-09-10 23:39:46] 2023-09-10 21:39:27,902 | INFO | found 0 job(s) in 20 queues [2023-09-10 23:39:46] 2023-09-10 21:39:27,902 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-09-10 23:39:46] 2023-09-10 21:39:27,902 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-09-10 23:39:46] 2023-09-10 21:39:27,925 | WARNING | job monitor detected an abort_job request (signal=None) [2023-09-10 23:39:46] 2023-09-10 21:39:27,925 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-09-10 23:39:46] 2023-09-10 21:39:27,926 | INFO | will abort loop [2023-09-10 23:39:46] 2023-09-10 21:39:28,000 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-09-10 23:39:46] 2023-09-10 21:39:28,905 | INFO | [job] retrieve thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:28,933 | INFO | [job] job monitor thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:28,950 | INFO | [data] control thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,137 | INFO | [payload] validate_pre thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,176 | INFO | [job] validate thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,211 | INFO | [data] copytool_in thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,310 | INFO | [payload] execute_payloads thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,436 | INFO | [payload] failed_post thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,463 | INFO | [job] create_data_payload thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,552 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-09-10 23:39:46] 2023-09-10 21:39:29,976 | INFO | [payload] validate_post thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,987 | INFO | [payload] control thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:29,995 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-09-10 23:39:46] 2023-09-10 21:39:30,007 | INFO | [data] copytool_out thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:30,219 | INFO | [job] control thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:31,000 | INFO | [job] queue monitor thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:33,580 | INFO | [data] queue_monitor thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:38,278 | INFO | job.realtimelogging is not enabled [2023-09-10 23:39:46] 2023-09-10 21:39:39,284 | INFO | [payload] run_realtimelog thread has finished [2023-09-10 23:39:46] 2023-09-10 21:39:40,870 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139900617201472)>', '<ExcThread(monitor, started 139899902621440)>'] [2023-09-10 23:39:46] 2023-09-10 21:39:41,037 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-09-10 23:39:46] 2023-09-10 21:39:41,037 | INFO | [monitor] control thread has ended [2023-09-10 23:39:46] 2023-09-10 21:39:45,891 | INFO | end of generic workflow (traces error code: 0) [2023-09-10 23:39:46] 2023-09-10 21:39:45,892 | INFO | traces error code: 0 [2023-09-10 23:39:46] 2023-09-10 21:39:45,893 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-09-10 23:39:46] 2023-09-10 21:39:45,999 [wrapper] ==== pilot stdout END ==== [2023-09-10 23:39:46] 2023-09-10 21:39:46,008 [wrapper] ==== wrapper stdout RESUME ==== [2023-09-10 23:39:46] 2023-09-10 21:39:46,015 [wrapper] pilotpid: 2563219 [2023-09-10 23:39:46] 2023-09-10 21:39:46,022 [wrapper] Pilot exit status: 0 [2023-09-10 23:39:46] 2023-09-10 21:39:46,078 [wrapper] pandaids: 5959513081 [2023-09-10 23:39:46] 2023-09-10 21:39:46,151 [wrapper] apfmon messages muted [2023-09-10 23:39:46] 2023-09-10 21:39:46,159 [wrapper] Test setup, not cleaning [2023-09-10 23:39:46] 2023-09-10 21:39:46,167 [wrapper] ==== wrapper stdout END ==== [2023-09-10 23:39:46] 2023-09-10 21:39:46,174 [wrapper] ==== wrapper stderr END ==== [2023-09-10 23:39:46] 2023-09-10 21:39:46,191 [wrapper] wrapperexiting ec=0, duration=1577 [2023-09-10 23:39:46] 2023-09-10 21:39:46,201 [wrapper] apfmon messages muted [2023-09-10 23:39:46] *** Error codes and diagnostics *** [2023-09-10 23:39:46] "exeErrorCode": 0, [2023-09-10 23:39:46] "exeErrorDiag": "", [2023-09-10 23:39:46] "pilotErrorCode": 0, [2023-09-10 23:39:46] "pilotErrorDiag": "", [2023-09-10 23:39:46] *** Listing of results directory *** [2023-09-10 23:39:46] total 41912 [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 418016 sep 10 21:32 pilot3.tar.gz [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 4388 sep 10 22:06 queuedata.json [2023-09-10 23:39:46] -rwx------ 1 boinc boinc 27277 sep 10 22:07 runpilot2-wrapper.sh [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 107 sep 10 23:13 wrapper_26015_x86_64-pc-linux-gnu [2023-09-10 23:39:46] -rwxr-xr-x 1 boinc boinc 7986 sep 10 23:13 run_atlas [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 112 sep 10 23:13 job.xml [2023-09-10 23:39:46] -rw-r--r-- 2 boinc boinc 17596 sep 10 23:13 start_atlas.sh [2023-09-10 23:39:46] drwxrwx--x 2 boinc boinc 4096 sep 10 23:13 shared [2023-09-10 23:39:46] -rw-r--r-- 2 boinc boinc 428874 sep 10 23:13 input.tar.gz [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 6838 sep 10 23:13 init_data.xml [2023-09-10 23:39:46] -rw-r--r-- 2 boinc boinc 37438704 sep 10 23:13 EVNT.04972714._000033.pool.root.1 [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 0 sep 10 23:13 boinc_lockfile [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 2800 sep 10 23:13 pandaJob.out [2023-09-10 23:39:46] -rw------- 1 boinc boinc 424 sep 10 23:13 setup.sh.local [2023-09-10 23:39:46] -rw------- 1 boinc boinc 1022644 sep 10 23:13 agis_schedconf.cvmfs.json [2023-09-10 23:39:46] -rw------- 1 boinc boinc 1389912 sep 10 23:14 cric_ddmendpoints.json [2023-09-10 23:39:46] drwx------ 4 boinc boinc 4096 sep 10 23:15 pilot3 [2023-09-10 23:39:46] -rw------- 1 boinc boinc 1251651 sep 10 23:32 Hits.hc_20275052.BOINC-TEST.0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.HITS.pool.root [2023-09-10 23:39:46] -rw------- 1 boinc boinc 1003 sep 10 23:32 memory_monitor_summary.json [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 533 sep 10 23:32 boinc_task_state.xml [2023-09-10 23:39:46] -rw------- 1 boinc boinc 158748 sep 10 23:35 0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.job.log.tgz [2023-09-10 23:39:46] -rw------- 1 boinc boinc 6682 sep 10 23:39 heartbeat.json [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 8192 sep 10 23:39 boinc_mmap_file [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 25 sep 10 23:39 wrapper_checkpoint.txt [2023-09-10 23:39:46] -rw------- 1 boinc boinc 4256 sep 10 23:39 pilotlog.txt [2023-09-10 23:39:46] -rw------- 1 boinc boinc 209618 sep 10 23:39 0b696d78-9f90-493d-b2b0-389bae0ea7ca_24692.job.log [2023-09-10 23:39:46] -rw------- 1 boinc boinc 510 sep 10 23:39 output.list [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 680 sep 10 23:39 runtime_log [2023-09-10 23:39:46] -rw------- 1 boinc boinc 389120 sep 10 23:39 result.tar.gz [2023-09-10 23:39:46] -rw------- 1 boinc boinc 635 sep 10 23:39 thsKDmStfz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmgzQKDmTlW1Jm.diag [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 11800 sep 10 23:39 runtime_log.err [2023-09-10 23:39:46] -rw-r--r-- 1 boinc boinc 23535 sep 10 23:39 stderr.txt [2023-09-10 23:39:46] HITS file was successfully produced: [2023-09-10 23:39:46] -rw------- 1 boinc boinc 1251651 sep 10 23:32 shared/HITS.pool.root.1 [2023-09-10 23:39:46] *** Contents of shared directory: *** [2023-09-10 23:39:46] total 38612 [2023-09-10 23:39:46] -rw-r--r-- 2 boinc boinc 17596 sep 10 23:13 start_atlas.sh [2023-09-10 23:39:46] -rw-r--r-- 2 boinc boinc 428874 sep 10 23:13 input.tar.gz [2023-09-10 23:39:46] -rw-r--r-- 2 boinc boinc 37438704 sep 10 23:13 ATLAS.root_0 [2023-09-10 23:39:46] -rw------- 1 boinc boinc 1251651 sep 10 23:32 HITS.pool.root.1 [2023-09-10 23:39:46] -rw------- 1 boinc boinc 389120 sep 10 23:39 result.tar.gz 23:39:47 (2560050): run_atlas exited; CPU time 484.770781 23:39:47 (2560050): called boinc_finish(0) </stderr_txt> ]]>
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