Name | zVYKDmwCjz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmL0QKDmtLsBnm_0 |
Workunit | 2331044 |
Created | 10 Sep 2023, 23:39:46 UTC |
Sent | 10 Sep 2023, 23:40:41 UTC |
Report deadline | 17 Sep 2023, 23:40:41 UTC |
Received | 11 Sep 2023, 0:18:03 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4778 |
Run time | 24 min 44 sec |
CPU time | 8 min 2 sec |
Validate state | Valid |
Credit | 18.34 |
Device peak FLOPS | 6.95 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.56 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 78.69 MB |
<core_client_version>7.20.5</core_client_version> <![CDATA[ <stderr_txt> 01:53:04 (2693720): wrapper (7.7.26015): starting 01:53:04 (2693720): wrapper: running run_atlas (--nthreads 3) [2023-09-11 01:53:04] Arguments: --nthreads 3 [2023-09-11 01:53:04] Threads: 3 [2023-09-11 01:53:04] Checking for CVMFS [2023-09-11 01:53:05] Probing /cvmfs/atlas.cern.ch... OK [2023-09-11 01:53:05] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-09-11 01:53:05] Running cvmfs_config stat atlas.cern.ch [2023-09-11 01:53:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-09-11 01:53:05] 2.11.0.0 2269933 498 59324 123438 2 73 3107216 4194304 0 130560 0 1848050 99.997 62320 3433 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1 [2023-09-11 01:53:05] CVMFS is ok [2023-09-11 01:53:05] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-09-11 01:53:05] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2023-09-11 01:53:05] Small home clusters do not require a local http proxy but it is suggested if [2023-09-11 01:53:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-09-11 01:53:05] Further information can be found at the LHC@home message board. [2023-09-11 01:53:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-09-11 01:53:05] Checking for apptainer binary... [2023-09-11 01:53:05] apptainer is not installed, using version from CVMFS [2023-09-11 01:53:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-09-11 01:53:06] dbgrensenh27vm [2023-09-11 01:53:06] apptainer works [2023-09-11 01:53:06] Set ATHENA_PROC_NUMBER=3 [2023-09-11 01:53:06] Set ATHENA_CORE_NUMBER=3 [2023-09-11 01:53:06] Starting ATLAS job with PandaID=5959636634 [2023-09-11 01:53:06] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-09-11 02:17:46] *** The last 200 lines of the pilot log: *** [2023-09-11 02:17:46] 2023-09-11 00:16:47,473 | INFO | will try again after 17s.. [2023-09-11 02:17:46] 2023-09-11 00:16:48,715 | INFO | monitor loop #202: job 0:5959636634 is in state 'stageout' [2023-09-11 02:17:46] 2023-09-11 00:16:48,868 | INFO | number of running child processes to parent process 2704157: 1 [2023-09-11 02:17:46] 2023-09-11 00:16:48,869 | INFO | maximum number of monitored processes: 9 [2023-09-11 02:17:46] 2023-09-11 00:16:51,375 | INFO | monitor loop #203: job 0:5959636634 is in state 'stageout' [2023-09-11 02:17:46] 2023-09-11 00:16:51,468 | INFO | number of running child processes to parent process 2704157: 1 [2023-09-11 02:17:46] 2023-09-11 00:16:51,468 | INFO | maximum number of monitored processes: 9 [2023-09-11 02:17:46] 2023-09-11 00:16:52,940 | INFO | 1408s have passed since pilot start [2023-09-11 02:17:46] 2023-09-11 00:16:53,974 | INFO | monitor loop #204: job 0:5959636634 is in state 'stageout' [2023-09-11 02:17:46] 2023-09-11 00:16:54,065 | INFO | number of running child processes to parent process 2704157: 1 [2023-09-11 02:17:46] 2023-09-11 00:16:54,065 | INFO | maximum number of monitored processes: 9 [2023-09-11 02:17:46] 2023-09-11 00:16:56,580 | INFO | monitor loop #205: job 0:5959636634 is in state 'stageout' [2023-09-11 02:17:46] 2023-09-11 00:16:56,698 | INFO | number of running child processes to parent process 2704157: 1 [2023-09-11 02:17:46] 2023-09-11 00:16:56,698 | INFO | maximum number of monitored processes: 9 [2023-09-11 02:17:46] 2023-09-11 00:16:59,206 | INFO | monitor loop #206: job 0:5959636634 is in state 'stageout' [2023-09-11 02:17:46] 2023-09-11 00:16:59,295 | INFO | number of running child processes to parent process 2704157: 1 [2023-09-11 02:17:46] 2023-09-11 00:16:59,296 | INFO | maximum number of monitored processes: 9 [2023-09-11 02:17:46] 2023-09-11 00:17:01,808 | INFO | monitor loop #207: job 0:5959636634 is in state 'stageout' [2023-09-11 02:17:46] 2023-09-11 00:17:01,890 | INFO | number of running child processes to parent process 2704157: 1 [2023-09-11 02:17:46] 2023-09-11 00:17:01,890 | INFO | maximum number of monitored processes: 9 [2023-09-11 02:17:46] 2023-09-11 00:17:04,406 | INFO | monitor loop #208: job 0:5959636634 is in state 'stageout' [2023-09-11 02:17:46] 2023-09-11 00:17:04,522 | INFO | number of running child processes to parent process 2704157: 1 [2023-09-11 02:17:46] 2023-09-11 00:17:04,522 | INFO | maximum number of monitored processes: 9 [2023-09-11 02:17:46] 2023-09-11 00:17:04,559 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-09-11 02:17:46] 2023-09-11 00:17:04,619 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-09-11 02:17:46] 2023-09-11 00:17:04,620 | WARNING | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis [2023-09-11 02:17:46] 2023-09-11 00:17:04,656 | INFO | transferring file d1cddc82-8c36-44dc-87b7-0ba3feacfbd1_3481.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5959636634/d1cddc82-8c36-44dc-87b7-0ba3fea [2023-09-11 02:17:46] 2023-09-11 00:17:04,656 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5959636634/d1cddc82-8c36-44dc-87b7-0ba3feacfbd1_3481.1.job.log.tgz /var/lib/boinc-clie [2023-09-11 02:17:46] 2023-09-11 00:17:04,702 | INFO | Adding to output.list: d1cddc82-8c36-44dc-87b7-0ba3feacfbd1_3481.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/b7/e5/d1cddc82-8c36-4 [2023-09-11 02:17:46] 2023-09-11 00:17:04,702 | INFO | summary of transferred files: [2023-09-11 02:17:46] 2023-09-11 00:17:04,702 | INFO | -- lfn=d1cddc82-8c36-44dc-87b7-0ba3feacfbd1_3481.1.job.log.tgz, status_code=0, status=transferred [2023-09-11 02:17:46] 2023-09-11 00:17:04,703 | INFO | stage-out finished correctly [2023-09-11 02:17:46] 2023-09-11 00:17:07,030 | INFO | monitor loop #209: job 0:5959636634 is in state 'finished' [2023-09-11 02:17:46] 2023-09-11 00:17:07,032 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 02:17:46] 2023-09-11 00:17:07,065 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-09-11 02:17:46] 2023-09-11 00:17:08,930 | INFO | job 5959636634 has state=finished [2023-09-11 02:17:46] 2023-09-11 00:17:08,931 | INFO | preparing for final server update for job 5959636634 in state='finished' [2023-09-11 02:17:46] 2023-09-11 00:17:08,931 | INFO | this job has now completed (state=finished) [2023-09-11 02:17:46] 2023-09-11 00:17:08,931 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-09-11 02:17:46] 2023-09-11 00:17:08,931 | INFO | job 5959636634 has finished - writing final server update [2023-09-11 02:17:46] 2023-09-11 00:17:08,933 | WARNING | wrong length of table data, x=[1694390569.0, 1694390630.0, 1694390691.0, 1694390752.0, 1694390813.0, 1694390874.0, 1694390935.0], y=[747863.0, 902106.0, 1095246.0, [2023-09-11 02:17:46] 2023-09-11 00:17:08,934 | INFO | total number of processed events: 2 (read) [2023-09-11 02:17:46] 2023-09-11 00:17:08,937 | INFO | executing command: lscpu [2023-09-11 02:17:46] 2023-09-11 00:17:08,979 | INFO | found 6 cores (6 cores per socket, 1 sockets) [2023-09-11 02:17:46] 2023-09-11 00:17:08,979 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-09-11 02:17:46] 2023-09-11 00:17:09,050 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-09-11 02:17:46] 2023-09-11 00:17:09,539 | INFO | monitor loop #210: job 0:5959636634 is in state 'finished' [2023-09-11 02:17:46] 2023-09-11 00:17:09,540 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 02:17:46] 2023-09-11 00:17:12,047 | INFO | monitor loop #211: job 0:5959636634 is in state 'finished' [2023-09-11 02:17:46] 2023-09-11 00:17:12,049 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 02:17:46] 2023-09-11 00:17:14,558 | INFO | monitor loop #212: job 0:5959636634 is in state 'finished' [2023-09-11 02:17:46] 2023-09-11 00:17:14,558 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 02:17:46] 2023-09-11 00:17:17,060 | INFO | monitor loop #213: job 0:5959636634 is in state 'finished' [2023-09-11 02:17:46] 2023-09-11 00:17:17,060 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 02:17:46] 2023-09-11 00:17:19,563 | INFO | monitor loop #214: job 0:5959636634 is in state 'finished' [2023-09-11 02:17:46] 2023-09-11 00:17:19,563 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 02:17:46] 2023-09-11 00:17:22,068 | INFO | monitor loop #215: job 0:5959636634 is in state 'finished' [2023-09-11 02:17:46] 2023-09-11 00:17:22,068 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 02:17:46] 2023-09-11 00:17:23,650 | INFO | CPU arch script returned: x86-64-v2 [2023-09-11 02:17:46] 2023-09-11 00:17:23,650 | INFO | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-5959636634/memory_monitor_summary.json (trf name=prmon) [2023-09-11 02:17:46] 2023-09-11 00:17:23,651 | INFO | extracted standard info from prmon json [2023-09-11 02:17:46] 2023-09-11 00:17:23,651 | INFO | extracted standard memory fields from prmon json [2023-09-11 02:17:46] 2023-09-11 00:17:23,651 | INFO | .............................. [2023-09-11 02:17:46] 2023-09-11 00:17:23,651 | INFO | . Timing measurements: [2023-09-11 02:17:46] 2023-09-11 00:17:23,652 | INFO | . get job = 45 s [2023-09-11 02:17:46] 2023-09-11 00:17:23,652 | INFO | . initial setup = 49 s [2023-09-11 02:17:46] 2023-09-11 00:17:23,652 | INFO | . payload setup = 41 s [2023-09-11 02:17:46] 2023-09-11 00:17:23,652 | INFO | . stage-in = 71 s [2023-09-11 02:17:46] 2023-09-11 00:17:23,652 | INFO | . payload execution = 857 s [2023-09-11 02:17:46] 2023-09-11 00:17:23,652 | INFO | . stage-out = 326 s [2023-09-11 02:17:46] 2023-09-11 00:17:23,652 | INFO | .............................. [2023-09-11 02:17:46] 2023-09-11 00:17:23,998 | INFO | [2023-09-11 02:17:46] 2023-09-11 00:17:23,999 | INFO | job summary report [2023-09-11 02:17:46] 2023-09-11 00:17:24,000 | INFO | -------------------------------------------------- [2023-09-11 02:17:46] 2023-09-11 00:17:24,000 | INFO | PanDA job id: 5959636634 [2023-09-11 02:17:46] 2023-09-11 00:17:24,000 | INFO | task id: NULL [2023-09-11 02:17:46] 2023-09-11 00:17:24,000 | INFO | errors: (none) [2023-09-11 02:17:46] 2023-09-11 00:17:24,000 | INFO | status: LOG_TRANSFER = DONE [2023-09-11 02:17:46] 2023-09-11 00:17:24,000 | INFO | pilot state: finished [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | transexitcode: 0 [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | exeerrorcode: 0 [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | exeerrordiag: [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | exitcode: 0 [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | exitmsg: OK [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | cpuconsumptiontime: 619 s [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | nevents: 2 [2023-09-11 02:17:46] 2023-09-11 00:17:24,001 | INFO | neventsw: 0 [2023-09-11 02:17:46] 2023-09-11 00:17:24,002 | INFO | pid: 2704157 [2023-09-11 02:17:46] 2023-09-11 00:17:24,002 | INFO | pgrp: 2704157 [2023-09-11 02:17:46] 2023-09-11 00:17:24,002 | INFO | corecount: 3 [2023-09-11 02:17:46] 2023-09-11 00:17:24,002 | INFO | event service: False [2023-09-11 02:17:46] 2023-09-11 00:17:24,002 | INFO | sizes: {0: 2490112, 1: 2490311, 12: 2490457, 23: 2490485, 33: 2490513, 44: 2490541, 54: 2490697, 65: 2490725, 76: 2490753, 83: 2490869, 86: 2490897, 902: 2510937, [2023-09-11 02:17:46] 2023-09-11 00:17:24,002 | INFO | -------------------------------------------------- [2023-09-11 02:17:46] 2023-09-11 00:17:24,002 | INFO | [2023-09-11 02:17:46] 2023-09-11 00:17:24,003 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/1 [2023-09-11 02:17:46] 2023-09-11 00:17:24,098 | INFO | queue jobs had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,099 | INFO | queue payloads had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,099 | INFO | queue data_in had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,099 | INFO | queue data_out had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,099 | INFO | queue current_data_in had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,099 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,099 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,100 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,101 | INFO | queue completed_jobids has 1 job(s) [2023-09-11 02:17:46] 2023-09-11 00:17:24,101 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,101 | INFO | queue messages had 0 job(s) [purged] [2023-09-11 02:17:46] 2023-09-11 00:17:24,101 | INFO | job 5959636634 has completed (purged errors) [2023-09-11 02:17:46] 2023-09-11 00:17:24,101 | INFO | overall cleanup function is called [2023-09-11 02:17:46] 2023-09-11 00:17:25,111 | INFO | --- collectZombieJob: --- 10, [2704157] [2023-09-11 02:17:46] 2023-09-11 00:17:25,111 | INFO | zombie collector trying to kill pid 2704157 [2023-09-11 02:17:46] 2023-09-11 00:17:25,111 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-09-11 02:17:46] 2023-09-11 00:17:26,119 | INFO | collected zombie processes [2023-09-11 02:17:46] 2023-09-11 00:17:26,120 | INFO | will now attempt to kill all subprocesses of pid=2704157 [2023-09-11 02:17:46] 2023-09-11 00:17:26,247 | INFO | process IDs to be killed: [2704157] (in reverse order) [2023-09-11 02:17:46] 2023-09-11 00:17:26,332 | WARNING | found no corresponding commands to process id(s) [2023-09-11 02:17:46] 2023-09-11 00:17:26,332 | INFO | Do not look for orphan processes in BOINC jobs [2023-09-11 02:17:46] 2023-09-11 00:17:26,332 | INFO | ready for new job [2023-09-11 02:17:46] 2023-09-11 00:17:26,332 | INFO | pilot has finished with previous job - re-establishing logging [2023-09-11 02:17:46] 2023-09-11 00:17:26,334 | INFO | ************************************* [2023-09-11 02:17:46] 2023-09-11 00:17:26,334 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-09-11 02:17:46] 2023-09-11 00:17:26,334 | INFO | ************************************* [2023-09-11 02:17:46] 2023-09-11 00:17:26,334 | INFO | [2023-09-11 02:17:46] 2023-09-11 00:17:26,334 | INFO | pilot is running in a VM [2023-09-11 02:17:46] 2023-09-11 00:17:26,334 | INFO | architecture information: [2023-09-11 02:17:46] 2023-09-11 00:17:26,336 | INFO | executing command: cat /etc/os-release [2023-09-11 02:17:46] 2023-09-11 00:17:26,364 | INFO | cat /etc/os-release: [2023-09-11 02:17:46] NAME="CentOS Linux" [2023-09-11 02:17:46] VERSION="7 (Core)" [2023-09-11 02:17:46] ID="centos" [2023-09-11 02:17:46] ID_LIKE="rhel fedora" [2023-09-11 02:17:46] VERSION_ID="7" [2023-09-11 02:17:46] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-09-11 02:17:46] ANSI_COLOR="0;31" [2023-09-11 02:17:46] CPE_NAME="cpe:/o:centos:centos:7" [2023-09-11 02:17:46] HOME_URL="https://www.centos.org/" [2023-09-11 02:17:46] BUG_REPORT_URL="https://bugs.centos.org/" [2023-09-11 02:17:46] [2023-09-11 02:17:46] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-09-11 02:17:46] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-09-11 02:17:46] REDHAT_SUPPORT_PRODUCT="centos" [2023-09-11 02:17:46] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-09-11 02:17:46] [2023-09-11 02:17:46] 2023-09-11 00:17:26,365 | INFO | ************************************* [2023-09-11 02:17:46] 2023-09-11 00:17:26,870 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1 [2023-09-11 02:17:46] 2023-09-11 00:17:26,900 | INFO | sufficient remaining disk space (37111201792 B) [2023-09-11 02:17:46] 2023-09-11 00:17:26,900 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-09-11 02:17:46] 2023-09-11 00:17:26,900 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-09-11 02:17:46] 2023-09-11 00:17:26,901 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-09-11 02:17:46] 2023-09-11 00:17:26,901 | INFO | found 0 job(s) in 20 queues [2023-09-11 02:17:46] 2023-09-11 00:17:26,901 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-09-11 02:17:46] 2023-09-11 00:17:26,901 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-09-11 02:17:46] 2023-09-11 00:17:26,901 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-09-11 02:17:46] 2023-09-11 00:17:27,082 | WARNING | job monitor detected an abort_job request (signal=None) [2023-09-11 02:17:46] 2023-09-11 00:17:27,084 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-09-11 02:17:46] 2023-09-11 00:17:27,084 | INFO | will abort loop [2023-09-11 02:17:46] 2023-09-11 00:17:27,844 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-09-11 02:17:46] 2023-09-11 00:17:27,907 | INFO | [job] retrieve thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,027 | INFO | [job] control thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,075 | INFO | [data] control thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,091 | INFO | [job] job monitor thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,486 | INFO | [data] copytool_in thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,585 | INFO | [job] create_data_payload thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,741 | INFO | [payload] validate_post thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,749 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-09-11 02:17:46] 2023-09-11 00:17:28,835 | INFO | [payload] failed_post thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:28,871 | INFO | [payload] execute_payloads thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:29,021 | INFO | [job] validate thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:29,274 | INFO | [payload] control thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:29,394 | INFO | [payload] validate_pre thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:29,758 | INFO | [job] queue monitor thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:29,852 | INFO | [data] copytool_out thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:30,910 | INFO | [data] queue_monitor thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:37,680 | INFO | job.realtimelogging is not enabled [2023-09-11 02:17:46] 2023-09-11 00:17:38,681 | INFO | [payload] run_realtimelog thread has finished [2023-09-11 02:17:46] 2023-09-11 00:17:40,703 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140668137203520)>', '<ExcThread(monitor, started 140667846104832)>'] [2023-09-11 02:17:46] 2023-09-11 00:17:40,964 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-09-11 02:17:46] 2023-09-11 00:17:40,964 | INFO | [monitor] control thread has ended [2023-09-11 02:17:46] 2023-09-11 00:17:45,728 | INFO | end of generic workflow (traces error code: 0) [2023-09-11 02:17:46] 2023-09-11 00:17:45,728 | INFO | traces error code: 0 [2023-09-11 02:17:46] 2023-09-11 00:17:45,728 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-09-11 02:17:46] 2023-09-11 00:17:45,794 [wrapper] ==== pilot stdout END ==== [2023-09-11 02:17:46] 2023-09-11 00:17:45,803 [wrapper] ==== wrapper stdout RESUME ==== [2023-09-11 02:17:46] 2023-09-11 00:17:45,818 [wrapper] pilotpid: 2696891 [2023-09-11 02:17:46] 2023-09-11 00:17:45,825 [wrapper] Pilot exit status: 0 [2023-09-11 02:17:46] 2023-09-11 00:17:45,860 [wrapper] pandaids: 5959636634 [2023-09-11 02:17:46] 2023-09-11 00:17:45,886 [wrapper] apfmon messages muted [2023-09-11 02:17:46] 2023-09-11 00:17:45,940 [wrapper] Test setup, not cleaning [2023-09-11 02:17:46] 2023-09-11 00:17:45,948 [wrapper] ==== wrapper stdout END ==== [2023-09-11 02:17:46] 2023-09-11 00:17:45,957 [wrapper] ==== wrapper stderr END ==== [2023-09-11 02:17:46] 2023-09-11 00:17:45,977 [wrapper] wrapperexiting ec=0, duration=1478 [2023-09-11 02:17:46] 2023-09-11 00:17:45,987 [wrapper] apfmon messages muted [2023-09-11 02:17:46] *** Error codes and diagnostics *** [2023-09-11 02:17:46] "exeErrorCode": 0, [2023-09-11 02:17:46] "exeErrorDiag": "", [2023-09-11 02:17:46] "pilotErrorCode": 0, [2023-09-11 02:17:46] "pilotErrorDiag": "", [2023-09-11 02:17:46] *** Listing of results directory *** [2023-09-11 02:17:46] total 43108 [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 418016 sep 11 01:31 pilot3.tar.gz [2023-09-11 02:17:46] -rwx------ 1 boinc boinc 27275 sep 11 01:39 runpilot2-wrapper.sh [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 4388 sep 11 01:39 queuedata.json [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 107 sep 11 01:53 wrapper_26015_x86_64-pc-linux-gnu [2023-09-11 02:17:46] -rwxr-xr-x 1 boinc boinc 7986 sep 11 01:53 run_atlas [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 112 sep 11 01:53 job.xml [2023-09-11 02:17:46] -rw-r--r-- 2 boinc boinc 17620 sep 11 01:53 start_atlas.sh [2023-09-11 02:17:46] drwxrwx--x 2 boinc boinc 4096 sep 11 01:53 shared [2023-09-11 02:17:46] -rw-r--r-- 2 boinc boinc 428861 sep 11 01:53 input.tar.gz [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 6838 sep 11 01:53 init_data.xml [2023-09-11 02:17:46] -rw-r--r-- 2 boinc boinc 37438704 sep 11 01:53 EVNT.04972714._000033.pool.root.1 [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 0 sep 11 01:53 boinc_lockfile [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 2750 sep 11 01:53 pandaJob.out [2023-09-11 02:17:46] -rw------- 1 boinc boinc 424 sep 11 01:53 setup.sh.local [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1022620 sep 11 01:53 agis_schedconf.cvmfs.json [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1389912 sep 11 01:54 cric_ddmendpoints.json [2023-09-11 02:17:46] drwx------ 4 boinc boinc 4096 sep 11 01:54 pilot3 [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1251579 sep 11 02:11 output.1.d1cddc82-8c36-44dc-87b7-0ba3feacfbd1_3481.pool.root [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 533 sep 11 02:11 boinc_task_state.xml [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1003 sep 11 02:11 memory_monitor_summary.json [2023-09-11 02:17:46] -rw------- 1 boinc boinc 157945 sep 11 02:13 d1cddc82-8c36-44dc-87b7-0ba3feacfbd1_3481.1.job.log.tgz [2023-09-11 02:17:46] -rw------- 1 boinc boinc 6587 sep 11 02:17 heartbeat.json [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 8192 sep 11 02:17 boinc_mmap_file [2023-09-11 02:17:46] -rw------- 1 boinc boinc 4256 sep 11 02:17 pilotlog.txt [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 25 sep 11 02:17 wrapper_checkpoint.txt [2023-09-11 02:17:46] -rw------- 1 boinc boinc 196576 sep 11 02:17 d1cddc82-8c36-44dc-87b7-0ba3feacfbd1_3481.1.job.log [2023-09-11 02:17:46] -rw------- 1 boinc boinc 460 sep 11 02:17 output.list [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 744 sep 11 02:17 runtime_log [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1628160 sep 11 02:17 result.tar.gz [2023-09-11 02:17:46] -rw------- 1 boinc boinc 634 sep 11 02:17 zVYKDmwCjz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmL0QKDmtLsBnm.diag [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 12097 sep 11 02:17 runtime_log.err [2023-09-11 02:17:46] -rw-r--r-- 1 boinc boinc 23229 sep 11 02:17 stderr.txt [2023-09-11 02:17:46] HITS file was successfully produced: [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1251579 sep 11 02:11 shared/HITS.pool.root.1 [2023-09-11 02:17:46] *** Contents of shared directory: *** [2023-09-11 02:17:46] total 39824 [2023-09-11 02:17:46] -rw-r--r-- 2 boinc boinc 17620 sep 11 01:53 start_atlas.sh [2023-09-11 02:17:46] -rw-r--r-- 2 boinc boinc 428861 sep 11 01:53 input.tar.gz [2023-09-11 02:17:46] -rw-r--r-- 2 boinc boinc 37438704 sep 11 01:53 ATLAS.root_0 [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1251579 sep 11 02:11 HITS.pool.root.1 [2023-09-11 02:17:46] -rw------- 1 boinc boinc 1628160 sep 11 02:17 result.tar.gz 02:17:47 (2693720): run_atlas exited; CPU time 482.972875 02:17:47 (2693720): called boinc_finish(0) </stderr_txt> ]]>
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