Name | ZmdKDmxMkz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmc0QKDmF9Pz3n_0 |
Workunit | 2331062 |
Created | 11 Sep 2023, 0:54:09 UTC |
Sent | 11 Sep 2023, 0:55:51 UTC |
Report deadline | 18 Sep 2023, 0:55:51 UTC |
Received | 11 Sep 2023, 2:05:11 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4778 |
Run time | 28 min 6 sec |
CPU time | 10 min 32 sec |
Validate state | Valid |
Credit | 20.94 |
Device peak FLOPS | 6.95 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.57 GB |
Peak swap size | 7.79 GB |
Peak disk usage | 81.78 MB |
<core_client_version>7.20.5</core_client_version> <![CDATA[ <stderr_txt> 03:35:49 (2783185): wrapper (7.7.26015): starting 03:35:49 (2783185): wrapper: running run_atlas (--nthreads 3) [2023-09-11 03:35:49] Arguments: --nthreads 3 [2023-09-11 03:35:49] Threads: 3 [2023-09-11 03:35:49] Checking for CVMFS [2023-09-11 03:35:49] Probing /cvmfs/atlas.cern.ch... OK [2023-09-11 03:35:49] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-09-11 03:35:49] Running cvmfs_config stat atlas.cern.ch [2023-09-11 03:35:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-09-11 03:35:50] 2.11.0.0 2269933 601 59972 123440 3 82 3112326 4194304 0 130560 0 2248777 99.997 64257 3223 http://cernvmfs.gridpp.rl.ac.uk:8000/cvmfs/atlas.cern.ch DIRECT 1 [2023-09-11 03:35:50] CVMFS is ok [2023-09-11 03:35:50] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-09-11 03:35:50] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io. [2023-09-11 03:35:50] Small home clusters do not require a local http proxy but it is suggested if [2023-09-11 03:35:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-09-11 03:35:50] Further information can be found at the LHC@home message board. [2023-09-11 03:35:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-09-11 03:35:50] Checking for apptainer binary... [2023-09-11 03:35:50] apptainer is not installed, using version from CVMFS [2023-09-11 03:35:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-09-11 03:35:51] dbgrensenh27vm [2023-09-11 03:35:51] apptainer works [2023-09-11 03:35:51] Set ATHENA_PROC_NUMBER=3 [2023-09-11 03:35:51] Set ATHENA_CORE_NUMBER=3 [2023-09-11 03:35:51] Starting ATLAS job with PandaID=5959693197 [2023-09-11 03:35:51] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-09-11 04:03:52] *** The last 200 lines of the pilot log: *** [2023-09-11 04:03:52] 2023-09-11 02:02:49,284 | INFO | number of running child processes to parent process 2793634: 1 [2023-09-11 04:03:52] 2023-09-11 02:02:49,284 | INFO | maximum number of monitored processes: 7 [2023-09-11 04:03:52] 2023-09-11 02:02:51,807 | INFO | monitor loop #245: job 0:5959693197 is in state 'stageout' [2023-09-11 04:03:52] 2023-09-11 02:02:51,853 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-09-11 04:03:52] 2023-09-11 02:02:51,997 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-09-11 04:03:52] 2023-09-11 02:02:51,997 | WARNING | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis [2023-09-11 04:03:52] 2023-09-11 02:02:51,998 | INFO | number of running child processes to parent process 2793634: 1 [2023-09-11 04:03:52] 2023-09-11 02:02:51,998 | INFO | maximum number of monitored processes: 7 [2023-09-11 04:03:52] 2023-09-11 02:02:52,053 | INFO | transferring file 86a1c2e9-2a68-46f4-992e-bd863c2a9e14_1019.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-5959693197/86a1c2e9-2a68-46f4-992e-bd863c2 [2023-09-11 04:03:52] 2023-09-11 02:02:52,053 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-5959693197/86a1c2e9-2a68-46f4-992e-bd863c2a9e14_1019.1.job.log.tgz /var/lib/boinc-clie [2023-09-11 04:03:52] 2023-09-11 02:02:52,110 | INFO | Adding to output.list: 86a1c2e9-2a68-46f4-992e-bd863c2a9e14_1019.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/a5/7e/86a1c2e9-2a68-4 [2023-09-11 04:03:52] 2023-09-11 02:02:52,111 | INFO | summary of transferred files: [2023-09-11 04:03:52] 2023-09-11 02:02:52,111 | INFO | -- lfn=86a1c2e9-2a68-46f4-992e-bd863c2a9e14_1019.1.job.log.tgz, status_code=0, status=transferred [2023-09-11 04:03:52] 2023-09-11 02:02:52,111 | INFO | stage-out finished correctly [2023-09-11 04:03:52] 2023-09-11 02:02:54,505 | INFO | monitor loop #246: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:02:54,505 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:02:54,701 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-09-11 04:03:52] 2023-09-11 02:02:55,684 | INFO | job 5959693197 has state=finished [2023-09-11 04:03:52] 2023-09-11 02:02:55,684 | INFO | preparing for final server update for job 5959693197 in state='finished' [2023-09-11 04:03:52] 2023-09-11 02:02:55,684 | INFO | this job has now completed (state=finished) [2023-09-11 04:03:52] 2023-09-11 02:02:55,685 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-09-11 04:03:52] 2023-09-11 02:02:55,685 | INFO | job 5959693197 has finished - writing final server update [2023-09-11 04:03:52] 2023-09-11 02:02:55,685 | INFO | fitting pss+swap vs Time [2023-09-11 04:03:52] 2023-09-11 02:02:55,685 | INFO | current memory leak: 2053.20 B/s (using 9 data points, chi2=0.13) [2023-09-11 04:03:52] 2023-09-11 02:02:55,686 | INFO | total number of processed events: 2 (read) [2023-09-11 04:03:52] 2023-09-11 02:02:55,690 | INFO | executing command: lscpu [2023-09-11 04:03:52] 2023-09-11 02:02:55,730 | INFO | found 6 cores (6 cores per socket, 1 sockets) [2023-09-11 04:03:52] 2023-09-11 02:02:55,730 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-09-11 04:03:52] 2023-09-11 02:02:55,792 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-09-11 04:03:52] 2023-09-11 02:02:57,010 | INFO | monitor loop #247: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:02:57,010 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:02:59,513 | INFO | monitor loop #248: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:02:59,513 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:02,020 | INFO | monitor loop #249: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:02,021 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:04,539 | INFO | monitor loop #250: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:04,539 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:07,053 | INFO | monitor loop #251: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:07,054 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:09,560 | INFO | monitor loop #252: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:09,561 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:12,066 | INFO | monitor loop #253: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:12,066 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:14,570 | INFO | monitor loop #254: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:14,571 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:17,075 | INFO | monitor loop #255: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:17,076 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:19,577 | INFO | monitor loop #256: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:19,577 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:22,084 | INFO | monitor loop #257: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:22,084 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:24,589 | INFO | monitor loop #258: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:24,589 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:27,091 | INFO | monitor loop #259: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:27,091 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:29,607 | INFO | monitor loop #260: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:29,607 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:32,119 | INFO | monitor loop #261: job 0:5959693197 is in state 'finished' [2023-09-11 04:03:52] 2023-09-11 02:03:32,119 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-09-11 04:03:52] 2023-09-11 02:03:32,786 | INFO | CPU arch script returned: x86-64-v2 [2023-09-11 04:03:52] 2023-09-11 02:03:32,786 | INFO | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-5959693197/memory_monitor_summary.json (trf name=prmon) [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | extracted standard info from prmon json [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | extracted standard memory fields from prmon json [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | .............................. [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | . Timing measurements: [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | . get job = 46 s [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | . initial setup = 50 s [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | . payload setup = 41 s [2023-09-11 04:03:52] 2023-09-11 02:03:32,788 | INFO | . stage-in = 56 s [2023-09-11 04:03:52] 2023-09-11 02:03:32,789 | INFO | . payload execution = 983 s [2023-09-11 04:03:52] 2023-09-11 02:03:32,789 | INFO | . stage-out = 391 s [2023-09-11 04:03:52] 2023-09-11 02:03:32,789 | INFO | .............................. [2023-09-11 04:03:52] 2023-09-11 02:03:32,870 | INFO | [2023-09-11 04:03:52] 2023-09-11 02:03:32,870 | INFO | job summary report [2023-09-11 04:03:52] 2023-09-11 02:03:32,870 | INFO | -------------------------------------------------- [2023-09-11 04:03:52] 2023-09-11 02:03:32,870 | INFO | PanDA job id: 5959693197 [2023-09-11 04:03:52] 2023-09-11 02:03:32,870 | INFO | task id: NULL [2023-09-11 04:03:52] 2023-09-11 02:03:32,870 | INFO | errors: (none) [2023-09-11 04:03:52] 2023-09-11 02:03:32,870 | INFO | status: LOG_TRANSFER = DONE [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | pilot state: finished [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | transexitcode: 0 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | exeerrorcode: 0 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | exeerrordiag: [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | exitcode: 0 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | exitmsg: OK [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | cpuconsumptiontime: 777 s [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | nevents: 2 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | neventsw: 0 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | pid: 2793634 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | pgrp: 2793634 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | corecount: 3 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | event service: False [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | sizes: {0: 2490113, 1: 2490312, 11: 2490312, 22: 2490486, 33: 2490514, 43: 2490542, 54: 2490698, 64: 2490726, 68: 2490842, 75: 2490870, 1029: 2513881, 1420: 252320 [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | -------------------------------------------------- [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | [2023-09-11 04:03:52] 2023-09-11 02:03:32,871 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/1 [2023-09-11 04:03:52] 2023-09-11 02:03:32,959 | INFO | queue jobs had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,959 | INFO | queue payloads had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,960 | INFO | queue data_in had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,960 | INFO | queue data_out had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,960 | INFO | queue current_data_in had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,960 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,960 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,960 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,960 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,961 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,962 | INFO | queue completed_jobids has 1 job(s) [2023-09-11 04:03:52] 2023-09-11 02:03:32,962 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,962 | INFO | queue messages had 0 job(s) [purged] [2023-09-11 04:03:52] 2023-09-11 02:03:32,962 | INFO | job 5959693197 has completed (purged errors) [2023-09-11 04:03:52] 2023-09-11 02:03:32,962 | INFO | overall cleanup function is called [2023-09-11 04:03:52] 2023-09-11 02:03:33,970 | INFO | --- collectZombieJob: --- 10, [2793634] [2023-09-11 04:03:52] 2023-09-11 02:03:33,970 | INFO | zombie collector trying to kill pid 2793634 [2023-09-11 04:03:52] 2023-09-11 02:03:33,971 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-09-11 04:03:52] 2023-09-11 02:03:34,975 | INFO | collected zombie processes [2023-09-11 04:03:52] 2023-09-11 02:03:34,975 | INFO | will now attempt to kill all subprocesses of pid=2793634 [2023-09-11 04:03:52] 2023-09-11 02:03:35,080 | INFO | process IDs to be killed: [2793634] (in reverse order) [2023-09-11 04:03:52] 2023-09-11 02:03:35,167 | WARNING | found no corresponding commands to process id(s) [2023-09-11 04:03:52] 2023-09-11 02:03:35,168 | INFO | Do not look for orphan processes in BOINC jobs [2023-09-11 04:03:52] 2023-09-11 02:03:35,168 | INFO | ready for new job [2023-09-11 04:03:52] 2023-09-11 02:03:35,168 | INFO | pilot has finished with previous job - re-establishing logging [2023-09-11 04:03:52] 2023-09-11 02:03:35,169 | INFO | ************************************* [2023-09-11 04:03:52] 2023-09-11 02:03:35,169 | INFO | *** PanDA Pilot version 3.6.4.7 *** [2023-09-11 04:03:52] 2023-09-11 02:03:35,169 | INFO | ************************************* [2023-09-11 04:03:52] 2023-09-11 02:03:35,169 | INFO | [2023-09-11 04:03:52] 2023-09-11 02:03:35,169 | INFO | pilot is running in a VM [2023-09-11 04:03:52] 2023-09-11 02:03:35,170 | INFO | architecture information: [2023-09-11 04:03:52] 2023-09-11 02:03:35,171 | INFO | executing command: cat /etc/os-release [2023-09-11 04:03:52] 2023-09-11 02:03:35,201 | INFO | cat /etc/os-release: [2023-09-11 04:03:52] NAME="CentOS Linux" [2023-09-11 04:03:52] VERSION="7 (Core)" [2023-09-11 04:03:52] ID="centos" [2023-09-11 04:03:52] ID_LIKE="rhel fedora" [2023-09-11 04:03:52] VERSION_ID="7" [2023-09-11 04:03:52] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-09-11 04:03:52] ANSI_COLOR="0;31" [2023-09-11 04:03:52] CPE_NAME="cpe:/o:centos:centos:7" [2023-09-11 04:03:52] HOME_URL="https://www.centos.org/" [2023-09-11 04:03:52] BUG_REPORT_URL="https://bugs.centos.org/" [2023-09-11 04:03:52] [2023-09-11 04:03:52] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-09-11 04:03:52] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-09-11 04:03:52] REDHAT_SUPPORT_PRODUCT="centos" [2023-09-11 04:03:52] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-09-11 04:03:52] [2023-09-11 04:03:52] 2023-09-11 02:03:35,201 | INFO | ************************************* [2023-09-11 04:03:52] 2023-09-11 02:03:35,711 | INFO | executing command: df -mP /var/lib/boinc-client/slots/1 [2023-09-11 04:03:52] 2023-09-11 02:03:35,755 | INFO | sufficient remaining disk space (37018927104 B) [2023-09-11 04:03:52] 2023-09-11 02:03:35,755 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-09-11 04:03:52] 2023-09-11 02:03:35,755 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-09-11 04:03:52] 2023-09-11 02:03:35,756 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-09-11 04:03:52] 2023-09-11 02:03:35,757 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-09-11 04:03:52] 2023-09-11 02:03:35,758 | INFO | aborting loop [2023-09-11 04:03:52] 2023-09-11 02:03:35,758 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-09-11 04:03:52] 2023-09-11 02:03:35,758 | INFO | found 0 job(s) in 20 queues [2023-09-11 04:03:52] 2023-09-11 02:03:35,758 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-09-11 04:03:52] 2023-09-11 02:03:35,758 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-09-11 04:03:52] 2023-09-11 02:03:36,760 | INFO | [job] retrieve thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:36,764 | INFO | [job] job monitor thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:36,896 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-09-11 04:03:52] 2023-09-11 02:03:36,970 | INFO | [job] validate thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,029 | INFO | [payload] control thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,155 | INFO | [payload] validate_pre thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,231 | INFO | [payload] validate_post thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,456 | INFO | [payload] execute_payloads thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,575 | INFO | [data] copytool_in thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,636 | INFO | [data] control thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,655 | INFO | [job] create_data_payload thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,755 | INFO | [job] control thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,763 | INFO | [data] copytool_out thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:37,894 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-09-11 04:03:52] 2023-09-11 02:03:38,262 | INFO | [payload] failed_post thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:38,898 | INFO | [job] queue monitor thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:40,909 | INFO | [data] queue_monitor thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:45,974 | INFO | job.realtimelogging is not enabled [2023-09-11 04:03:52] 2023-09-11 02:03:46,984 | INFO | [payload] run_realtimelog thread has finished [2023-09-11 04:03:52] 2023-09-11 02:03:47,192 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140247329564480)>', '<ExcThread(monitor, started 140246234683136)>'] [2023-09-11 04:03:52] 2023-09-11 02:03:47,823 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-09-11 04:03:52] 2023-09-11 02:03:47,823 | INFO | [monitor] control thread has ended [2023-09-11 04:03:52] 2023-09-11 02:03:52,217 | INFO | end of generic workflow (traces error code: 0) [2023-09-11 04:03:52] 2023-09-11 02:03:52,217 | INFO | traces error code: 0 [2023-09-11 04:03:52] 2023-09-11 02:03:52,217 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-09-11 04:03:52] 2023-09-11 02:03:52,318 [wrapper] ==== pilot stdout END ==== [2023-09-11 04:03:52] 2023-09-11 02:03:52,326 [wrapper] ==== wrapper stdout RESUME ==== [2023-09-11 04:03:52] 2023-09-11 02:03:52,333 [wrapper] pilotpid: 2786356 [2023-09-11 04:03:52] 2023-09-11 02:03:52,363 [wrapper] Pilot exit status: 0 [2023-09-11 04:03:52] 2023-09-11 02:03:52,414 [wrapper] pandaids: 5959693197 [2023-09-11 04:03:52] 2023-09-11 02:03:52,437 [wrapper] apfmon messages muted [2023-09-11 04:03:52] 2023-09-11 02:03:52,448 [wrapper] Test setup, not cleaning [2023-09-11 04:03:52] 2023-09-11 02:03:52,465 [wrapper] ==== wrapper stdout END ==== [2023-09-11 04:03:52] 2023-09-11 02:03:52,480 [wrapper] ==== wrapper stderr END ==== [2023-09-11 04:03:52] 2023-09-11 02:03:52,496 [wrapper] wrapperexiting ec=0, duration=1680 [2023-09-11 04:03:52] 2023-09-11 02:03:52,503 [wrapper] apfmon messages muted [2023-09-11 04:03:52] *** Error codes and diagnostics *** [2023-09-11 04:03:52] "exeErrorCode": 0, [2023-09-11 04:03:52] "exeErrorDiag": "", [2023-09-11 04:03:52] "pilotErrorCode": 0, [2023-09-11 04:03:52] "pilotErrorDiag": "", [2023-09-11 04:03:52] *** Listing of results directory *** [2023-09-11 04:03:52] total 44760 [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 418016 sep 11 02:30 pilot3.tar.gz [2023-09-11 04:03:52] -rwx------ 1 boinc boinc 27277 sep 11 02:54 runpilot2-wrapper.sh [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 4388 sep 11 02:54 queuedata.json [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 107 sep 11 03:35 wrapper_26015_x86_64-pc-linux-gnu [2023-09-11 04:03:52] -rwxr-xr-x 1 boinc boinc 7986 sep 11 03:35 run_atlas [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 112 sep 11 03:35 job.xml [2023-09-11 04:03:52] -rw-r--r-- 2 boinc boinc 17600 sep 11 03:35 start_atlas.sh [2023-09-11 04:03:52] drwxrwx--x 2 boinc boinc 4096 sep 11 03:35 shared [2023-09-11 04:03:52] -rw-r--r-- 2 boinc boinc 428860 sep 11 03:35 input.tar.gz [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 6838 sep 11 03:35 init_data.xml [2023-09-11 04:03:52] -rw-r--r-- 2 boinc boinc 37965264 sep 11 03:35 EVNT.04972714._000027.pool.root.1 [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 0 sep 11 03:35 boinc_lockfile [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 2751 sep 11 03:35 pandaJob.out [2023-09-11 04:03:52] -rw------- 1 boinc boinc 424 sep 11 03:35 setup.sh.local [2023-09-11 04:03:52] -rw------- 1 boinc boinc 1022636 sep 11 03:36 agis_schedconf.cvmfs.json [2023-09-11 04:03:52] -rw------- 1 boinc boinc 1389912 sep 11 03:36 cric_ddmendpoints.json [2023-09-11 04:03:52] drwx------ 4 boinc boinc 4096 sep 11 03:37 pilot3 [2023-09-11 04:03:52] -rw------- 1 boinc boinc 1808608 sep 11 03:56 output.1.86a1c2e9-2a68-46f4-992e-bd863c2a9e14_1019.pool.root [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 533 sep 11 03:56 boinc_task_state.xml [2023-09-11 04:03:52] -rw------- 1 boinc boinc 1002 sep 11 03:56 memory_monitor_summary.json [2023-09-11 04:03:52] -rw------- 1 boinc boinc 160553 sep 11 03:59 86a1c2e9-2a68-46f4-992e-bd863c2a9e14_1019.1.job.log.tgz [2023-09-11 04:03:52] -rw------- 1 boinc boinc 8709 sep 11 04:03 heartbeat.json [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 8192 sep 11 04:03 boinc_mmap_file [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 25 sep 11 04:03 wrapper_checkpoint.txt [2023-09-11 04:03:52] -rw------- 1 boinc boinc 4161 sep 11 04:03 pilotlog.txt [2023-09-11 04:03:52] -rw------- 1 boinc boinc 218440 sep 11 04:03 86a1c2e9-2a68-46f4-992e-bd863c2a9e14_1019.1.job.log [2023-09-11 04:03:52] -rw------- 1 boinc boinc 460 sep 11 04:03 output.list [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 744 sep 11 04:03 runtime_log [2023-09-11 04:03:52] -rw------- 1 boinc boinc 2211840 sep 11 04:03 result.tar.gz [2023-09-11 04:03:52] -rw------- 1 boinc boinc 636 sep 11 04:03 ZmdKDmxMkz3n7Olcko1bjSoqABFKDmABFKDm7AsVDmc0QKDmF9Pz3n.diag [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 12091 sep 11 04:03 runtime_log.err [2023-09-11 04:03:52] -rw-r--r-- 1 boinc boinc 23412 sep 11 04:03 stderr.txt [2023-09-11 04:03:52] HITS file was successfully produced: [2023-09-11 04:03:52] -rw------- 1 boinc boinc 1808608 sep 11 03:56 shared/HITS.pool.root.1 [2023-09-11 04:03:52] *** Contents of shared directory: *** [2023-09-11 04:03:52] total 41444 [2023-09-11 04:03:52] -rw-r--r-- 2 boinc boinc 17600 sep 11 03:35 start_atlas.sh [2023-09-11 04:03:52] -rw-r--r-- 2 boinc boinc 428860 sep 11 03:35 input.tar.gz [2023-09-11 04:03:52] -rw-r--r-- 2 boinc boinc 37965264 sep 11 03:35 ATLAS.root_0 [2023-09-11 04:03:52] -rw------- 1 boinc boinc 1808608 sep 11 03:56 HITS.pool.root.1 [2023-09-11 04:03:52] -rw------- 1 boinc boinc 2211840 sep 11 04:03 result.tar.gz 04:03:53 (2783185): run_atlas exited; CPU time 632.431478 04:03:53 (2783185): called boinc_finish(0) </stderr_txt> ]]>
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