Name RJALDmV1g23n7Olcko1bjSoqABFKDmABFKDm7AsVDm3TRKDm7ck2Pn_0
Workunit 2332741
Created 19 Sep 2023, 3:56:20 UTC
Sent 19 Sep 2023, 3:59:13 UTC
Report deadline 26 Sep 2023, 3:59:13 UTC
Received 19 Sep 2023, 6:03:37 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 3450
Run time 23 min 22 sec
CPU time 12 min 7 sec
Validate state Valid
Credit 43.22
Device peak FLOPS 20.29 GFLOPS
Application version ATLAS Simulation v3.01 (vbox64_mt_mcore_atlas)
windows_x86_64
Peak working set size 121.64 MB
Peak swap size 137.62 MB
Peak disk usage 1.23 GB

Stderr output

<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
2023-09-19 00:39:05 (2704): Detected: vboxwrapper 26206
2023-09-19 00:39:05 (2704): Detected: BOINC client v7.16.20
2023-09-19 00:39:08 (2704): Detected: VirtualBox VboxManage Interface (Version: 6.0.14)
2023-09-19 00:39:09 (2704): Successfully copied 'init_data.xml' to the shared directory.
2023-09-19 00:39:10 (2704): Create VM. (boinc_f3ae481ba665ca4d, slot#10)
2023-09-19 00:39:11 (2704): Setting Memory Size for VM. (4700MB)
2023-09-19 00:39:11 (2704): Setting CPU Count for VM. (7)
2023-09-19 00:39:11 (2704): Setting Chipset Options for VM.
2023-09-19 00:39:12 (2704): Setting Graphics Controller Options for VM.
2023-09-19 00:39:12 (2704): Setting Boot Options for VM.
2023-09-19 00:39:13 (2704): Setting Network Configuration for NAT.
2023-09-19 00:39:13 (2704): Enabling VM Network Access.
2023-09-19 00:39:14 (2704): Disabling USB Support for VM.
2023-09-19 00:39:14 (2704): Disabling COM Port Support for VM.
2023-09-19 00:39:15 (2704): Disabling LPT Port Support for VM.
2023-09-19 00:39:15 (2704): Disabling Audio Support for VM.
2023-09-19 00:39:16 (2704): Disabling Clipboard Support for VM.
2023-09-19 00:39:16 (2704): Disabling Drag and Drop Support for VM.
2023-09-19 00:39:17 (2704): Adding storage controller(s) to VM.
2023-09-19 00:39:18 (2704): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-09-19 00:39:19 (2704): Adding VirtualBox Guest Additions to VM.
2023-09-19 00:39:20 (2704): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-09-19 00:39:21 (2704): forwarding host port 55197 to guest port 80
2023-09-19 00:39:21 (2704): Enabling remote desktop for VM.
2023-09-19 00:39:22 (2704): Required extension pack not installed, remote desktop not enabled.
2023-09-19 00:39:22 (2704): Enabling shared directory for VM.
2023-09-19 00:39:23 (2704): Starting VM using VBoxManage interface. (boinc_f3ae481ba665ca4d, slot#10)
2023-09-19 00:39:33 (2704): Successfully started VM. (PID = '9256')
2023-09-19 00:39:33 (2704): Reporting VM Process ID to BOINC.
2023-09-19 00:39:33 (2704): Guest Log: BIOS: VirtualBox 6.0.14
2023-09-19 00:39:33 (2704): Guest Log: CPUID EDX: 0x178bfbff
2023-09-19 00:39:33 (2704): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-09-19 00:39:33 (2704): VM state change detected. (old = 'poweredoff', new = 'running')
2023-09-19 00:39:33 (2704): Detected: Web Application Enabled (http://localhost:55197)
2023-09-19 00:39:33 (2704): Preference change detected
2023-09-19 00:39:33 (2704): Setting CPU throttle for VM. (80%)
2023-09-19 00:39:33 (2704): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 300 seconds) or (Vbox_job.xml: 900 seconds))
2023-09-19 00:39:34 (2704): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-09-19 00:39:34 (2704): Guest Log: BIOS: Booting from Hard Disk...
2023-09-19 00:39:42 (2704): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-09-19 00:39:42 (2704): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-09-19 00:39:42 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-09-19 00:39:43 (2704): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-09-19 00:39:54 (2704): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-09-19 00:39:54 (2704): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-09-19 00:40:14 (2704): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.000330 main     Log opened 2023-09-19T00:40:11.633949000Z
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.000559 main     OS Product: Linux
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.000637 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.000708 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.000779 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.000781 main     Process ID: 1338
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.000782 main     Package type: LINUX_64BITS_GENERIC
2023-09-19 00:40:14 (2704): Guest Log: 00:00:00.002703 main     5.2.32 r132073 started. Verbose level = 0
2023-09-19 00:40:14 (2704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-09-19 00:40:14 (2704): Guest Log: [INFO] Mounting shared directory
2023-09-19 00:40:15 (2704): Guest Log: [INFO] Checking for init_data.xml
2023-09-19 00:40:22 (2704): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-09-19 00:40:22 (2704): Guest Log: [INFO] Detected branch: dev
2023-09-19 00:40:23 (2704): Guest Log: This is the dev version of the ATLAS job wrapper
2023-09-19 00:40:23 (2704): Guest Log: Copying input files
2023-09-19 00:40:24 (2704): Guest Log: 00:00:10.006042 timesync vgsvcTimeSyncWorker: Radical guest time change: 14 412 034 496 000ns (GuestNow=1 695 098 423 673 539 000 ns GuestLast=1 695 084 011 639 043 000 ns fSetTimeLastLoop=true )
2023-09-19 00:40:27 (2704): Guest Log: Copied input files into RunAtlas.
2023-09-19 00:40:27 (2704): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-09-19 00:40:27 (2704): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-09-19 00:40:27 (2704): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-09-19 00:40:27 (2704): Guest Log: Further information can be found at the LHC@home message board.
2023-09-19 00:40:37 (2704): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-09-19 00:40:37 (2704): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-09-19 00:40:37 (2704): Guest Log: 2.6.3.0 1620 0 32372 123752 4 1 3118927 4096000 0 65024 0 0 n/a 961 1249 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-09-19 00:40:41 (2704): Guest Log: copied the webapp to /var/www
2023-09-19 00:40:41 (2704): Guest Log: ATHENA_PROC_NUMBER=7
2023-09-19 00:40:41 (2704): Guest Log: ATHENA_CORE_NUMBER=7
2023-09-19 00:40:41 (2704): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-09-19 00:40:41 (2704): Guest Log:  *** Starting ATLAS job. (PandaID=5966714205 taskID=NULL&cor) ***
2023-09-19 01:02:18 (2704): Guest Log:  *** Job finished ***
2023-09-19 01:02:18 (2704): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-09-19 01:02:18 (2704): Guest Log:  *** Error codes and diagnostics ***
2023-09-19 01:02:18 (2704): Guest Log:     "exeErrorCode": 65,
2023-09-19 01:02:18 (2704): Guest Log:     "exeErrorDiag": "Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm: ISF_Kernel_FullG4; Current Function: unknown\"",
2023-09-19 01:02:18 (2704): Guest Log:     "pilotErrorCode": 1305,
2023-09-19 01:02:18 (2704): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-09-19 04:56:32,822 CRITICAL Transform executor raised TransformValidationException: Non-zero return code from EVNTtoHITS (1); Logfile error in log.EVNTtoHITS: \"Segmentation fault: Event counter: 0; Run: unknown; Evt: unknown; Current algorithm",
2023-09-19 01:02:18 (2704): Guest Log:  *** Listing of results directory ***
2023-09-19 01:02:18 (2704): Guest Log: total 4348
2023-09-19 01:02:18 (2704): Guest Log: -rwx------. 1 atlas atlas   27364 Sep 19 03:56 runpilot2-wrapper.sh
2023-09-19 01:02:18 (2704): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Sep 19 03:56 queuedata.json
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas  435920 Sep 19 03:56 pilot3.tar.gz
2023-09-19 01:02:18 (2704): Guest Log: -rwxr-xr-x. 1 atlas atlas    8619 Sep 19 04:40 init_data.xml
2023-09-19 01:02:18 (2704): Guest Log: -rwxr-xr-x. 1 atlas atlas  447324 Sep 19 04:40 input.tar.gz
2023-09-19 01:02:18 (2704): Guest Log: -rwxr-xr-x. 1 atlas atlas   17624 Sep 19 04:40 start_atlas.sh
2023-09-19 01:02:18 (2704): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Sep 19 04:40 EVNT.04972714._000039.pool.root.1 -> /data/./ATLAS.root_0
2023-09-19 01:02:18 (2704): Guest Log: -rw-r--r--. 1 atlas atlas    2707 Sep 19 04:40 pandaJob.out
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas     424 Sep 19 04:40 setup.sh.local
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas 1005515 Sep 19 04:41 agis_schedconf.cvmfs.json
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas 1388715 Sep 19 04:42 cric_ddmendpoints.json
2023-09-19 01:02:18 (2704): Guest Log: drwx------. 4 atlas atlas    4096 Sep 19 04:43 pilot3
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas    1042 Sep 19 04:56 memory_monitor_summary.json
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas   92700 Sep 19 04:56 d05d311f-219c-4ee3-8394-6b10f99a384d_77712.job.log.tgz
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas    8254 Sep 19 05:01 heartbeat.json
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas    9977 Sep 19 05:02 pilotlog.txt
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas  407341 Sep 19 05:02 d05d311f-219c-4ee3-8394-6b10f99a384d_77712.job.log
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas     223 Sep 19 05:02 output.list
2023-09-19 01:02:18 (2704): Guest Log: -rw-r--r--. 1 atlas atlas     680 Sep 19 05:02 runtime_log
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas  522240 Sep 19 05:02 result.tar.gz
2023-09-19 01:02:18 (2704): Guest Log: -rw-r--r--. 1 atlas atlas   11289 Sep 19 05:02 runtime_log.err
2023-09-19 01:02:18 (2704): Guest Log: -rw-------. 1 atlas atlas     632 Sep 19 05:02 RJALDmV1g23n7Olcko1bjSoqABFKDmABFKDm7AsVDm3TRKDm7ck2Pn.diag
2023-09-19 01:02:18 (2704): Guest Log: Looking for outputfile Hits.hc_20275642.BOINC-TEST.d05d311f-219c-4ee3-8394-6b10f99a384d_77712.HITS.pool.root
2023-09-19 01:02:18 (2704): Guest Log: No HITS file was produced
2023-09-19 01:02:18 (2704): Guest Log: Successfully finished the ATLAS job!
2023-09-19 01:02:18 (2704): Guest Log: Copying the results back to the shared directory!
2023-09-19 01:02:18 (2704): Guest Log:  *** Contents of shared directory: ***
2023-09-19 01:02:19 (2704): Guest Log: total 37068
2023-09-19 01:02:19 (2704): Guest Log: -rwxrwxrwx. 1 root root 36949600 Sep 19 04:39 ATLAS.root_0
2023-09-19 01:02:19 (2704): Guest Log: -rwxrwxrwx. 1 root root     8619 Sep 19 04:39 init_data.xml
2023-09-19 01:02:19 (2704): Guest Log: -rwxrwxrwx. 1 root root   447324 Sep 19 03:59 input.tar.gz
2023-09-19 01:02:19 (2704): Guest Log: -rwxrwxrwx. 1 root root   522240 Sep 19 05:02 result.tar.gz
2023-09-19 01:02:19 (2704): Guest Log: -rwxrwxrwx. 1 root root    17624 Sep 19 03:59 start_atlas.sh
2023-09-19 01:02:19 (2704): Guest Log:  *** Success! Shutting down the machine. ***
2023-09-19 01:02:19 (2704): VM Completion File Detected.
2023-09-19 01:02:19 (2704): Powering off VM.
2023-09-19 01:02:20 (2704): Successfully stopped VM.
2023-09-19 01:02:20 (2704): Deregistering VM. (boinc_f3ae481ba665ca4d, slot#10)
2023-09-19 01:02:20 (2704): Removing network bandwidth throttle group from VM.
2023-09-19 01:02:21 (2704): Removing VM from VirtualBox.
01:02:26 (2704): called boinc_finish(0)

</stderr_txt>
]]>


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