Name 0R2LDmKKi23n7Olcko1bjSoqABFKDmABFKDm7AsVDmIURKDmVmLytn_0
Workunit 2332758
Created 19 Sep 2023, 5:19:42 UTC
Sent 19 Sep 2023, 5:34:00 UTC
Report deadline 26 Sep 2023, 5:34:00 UTC
Received 19 Sep 2023, 5:49:40 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4721
Run time 15 min 18 sec
CPU time 4 min 0 sec
Validate state Valid
Credit 18.15
Device peak FLOPS 5.74 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.58 GB
Peak swap size 2.12 GB
Peak disk usage 36.66 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:34:13 (777714): wrapper (7.7.26015): starting
07:34:13 (777714): wrapper: running run_atlas (--nthreads 1)
[2023-09-19 07:34:13] Arguments: --nthreads 1
[2023-09-19 07:34:13] Threads: 1
[2023-09-19 07:34:13] Checking for CVMFS
[2023-09-19 07:34:15] Probing /cvmfs/atlas.cern.ch... OK
[2023-09-19 07:34:16] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-09-19 07:34:16] Running cvmfs_config stat atlas.cern.ch
[2023-09-19 07:34:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-09-19 07:34:16] 2.11.0.0 777948 0 29656 123753 3 1 2390186 4096001 0 130560 0 0 0.000 960 1065 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-09-19 07:34:16] CVMFS is ok
[2023-09-19 07:34:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-09-19 07:34:16] Checking for apptainer binary...
[2023-09-19 07:34:16] Using apptainer found in PATH at /usr/bin/apptainer
[2023-09-19 07:34:16] Running /usr/bin/apptainer --version
[2023-09-19 07:34:16] apptainer version 1.2.2-1.el9
[2023-09-19 07:34:16] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-09-19 07:34:16] P620-CentOS9
[2023-09-19 07:34:16] apptainer works
[2023-09-19 07:34:16] Starting ATLAS job with PandaID=5966738985
[2023-09-19 07:34:16] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-09-19 07:49:29]  *** The last 200 lines of the pilot log: ***
[2023-09-19 07:49:29] 2023-09-19 05:48:28,344 | INFO     | monitor loop #155: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:28,344 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:30,845 | INFO     | monitor loop #156: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:30,846 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:33,348 | INFO     | monitor loop #157: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:33,349 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:35,849 | INFO     | monitor loop #158: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:35,850 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:38,352 | INFO     | monitor loop #159: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:38,352 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:40,853 | INFO     | monitor loop #160: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:40,854 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:41,919 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-09-19 07:49:29] 2023-09-19 05:48:41,986 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-09-19 07:49:29] 2023-09-19 05:48:41,986 | INFO     | will try again after 16s..
[2023-09-19 07:49:29] 2023-09-19 05:48:43,356 | INFO     | monitor loop #161: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:43,356 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:45,859 | INFO     | monitor loop #162: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:45,859 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:48,361 | INFO     | monitor loop #163: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:48,361 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:50,864 | INFO     | monitor loop #164: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:50,864 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:53,367 | INFO     | monitor loop #165: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:53,367 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:55,870 | INFO     | monitor loop #166: job 0:5966738985 is in state 'stageout'
[2023-09-19 07:49:29] 2023-09-19 05:48:55,870 | WARNING  | aborting job monitor tasks since payload process 789247 is not running
[2023-09-19 07:49:29] 2023-09-19 05:48:58,048 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-09-19 07:49:29] 2023-09-19 05:48:58,153 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-09-19 07:49:29] 2023-09-19 05:48:58,153 | WARNING  | cache file=/var/lib/boinc/slots/2/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/2/agis_ddmendpoints.
[2023-09-19 07:49:29] 2023-09-19 05:48:58,182 | INFO     | transferring file 4756b3e1-8e3d-4daa-a543-def4c31ef236_23276.1.job.log.tgz from /var/lib/boinc/slots/2/PanDA_Pilot-5966738985/4756b3e1-8e3d-4daa-a543-def4c31ef236_
[2023-09-19 07:49:29] 2023-09-19 05:48:58,183 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-5966738985/4756b3e1-8e3d-4daa-a543-def4c31ef236_23276.1.job.log.tgz /var/lib/boinc/slots/2/47
[2023-09-19 07:49:29] 2023-09-19 05:48:58,192 | INFO     | Adding to output.list: 4756b3e1-8e3d-4daa-a543-def4c31ef236_23276.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/85/d0/4756b3e1-8e3d-
[2023-09-19 07:49:29] 2023-09-19 05:48:58,192 | INFO     | summary of transferred files:
[2023-09-19 07:49:29] 2023-09-19 05:48:58,192 | INFO     |  -- lfn=4756b3e1-8e3d-4daa-a543-def4c31ef236_23276.1.job.log.tgz, status_code=0, status=transferred
[2023-09-19 07:49:29] 2023-09-19 05:48:58,192 | INFO     | stage-out finished correctly
[2023-09-19 07:49:29] 2023-09-19 05:48:58,373 | INFO     | monitor loop #167: job 0:5966738985 is in state 'finished'
[2023-09-19 07:49:29] 2023-09-19 05:48:58,373 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-19 07:49:29] 2023-09-19 05:49:00,149 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-09-19 07:49:29] 2023-09-19 05:49:00,874 | INFO     | monitor loop #168: job 0:5966738985 is in state 'finished'
[2023-09-19 07:49:29] 2023-09-19 05:49:00,875 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-19 07:49:29] 2023-09-19 05:49:02,680 | INFO     | job 5966738985 has state=finished
[2023-09-19 07:49:29] 2023-09-19 05:49:02,680 | INFO     | preparing for final server update for job 5966738985 in state='finished'
[2023-09-19 07:49:29] 2023-09-19 05:49:02,680 | INFO     | this job has now completed (state=finished)
[2023-09-19 07:49:29] 2023-09-19 05:49:02,680 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-09-19 07:49:29] 2023-09-19 05:49:02,680 | INFO     | job 5966738985 has finished - writing final server update
[2023-09-19 07:49:29] 2023-09-19 05:49:02,681 | WARNING  | wrong length of table data, x=[1695101806.0, 1695101867.0, 1695101928.0, 1695101989.0, 1695102050.0, 1695102111.0, 1695102172.0], y=[1953.0, 846934.0, 990190.0, 12
[2023-09-19 07:49:29] 2023-09-19 05:49:02,681 | INFO     | total number of processed events: 2 (read)
[2023-09-19 07:49:29] 2023-09-19 05:49:02,682 | INFO     | executing command: lscpu
[2023-09-19 07:49:29] 2023-09-19 05:49:02,689 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-09-19 07:49:29] 2023-09-19 05:49:02,690 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-09-19 07:49:29] 2023-09-19 05:49:02,699 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-09-19 07:49:29] 2023-09-19 05:49:03,375 | INFO     | monitor loop #169: job 0:5966738985 is in state 'finished'
[2023-09-19 07:49:29] 2023-09-19 05:49:03,375 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-19 07:49:29] 2023-09-19 05:49:05,879 | INFO     | monitor loop #170: job 0:5966738985 is in state 'finished'
[2023-09-19 07:49:29] 2023-09-19 05:49:05,879 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-19 07:49:29] 2023-09-19 05:49:08,223 | INFO     | CPU arch script returned: x86-64-v2
[2023-09-19 07:49:29] 2023-09-19 05:49:08,223 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-5966738985/memory_monitor_summary.json (trf name=prmon)
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | extracted standard info from prmon json
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | extracted standard memory fields from prmon json
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | ..............................
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . Timing measurements:
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . get job = 35 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . initial setup = 53 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . payload setup = 4 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . stage-in = 40 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . payload execution = 405 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . stage-out = 327 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | . log creation = 0 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,224 | INFO     | ..............................
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | 
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | job summary report
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | --------------------------------------------------
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | PanDA job id: 5966738985
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | task id: NULL
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | errors: (none)
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | status: LOG_TRANSFER = DONE 
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | pilot state: finished 
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | transexitcode: 0
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | exeerrorcode: 0
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | exeerrordiag: 
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | exitcode: 0
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | exitmsg: OK
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | cpuconsumptiontime: 256 s
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | nevents: 2
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | neventsw: 0
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | pid: 789247
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | pgrp: 789247
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | corecount: 1
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | event service: False
[2023-09-19 07:49:29] 2023-09-19 05:49:08,280 | INFO     | sizes: {0: 2486904, 1: 2487839, 12: 2487985, 22: 2488013, 33: 2488041, 43: 2488285, 413: 2508881, 742: 2517931, 744: 2517987, 752: 2518209}
[2023-09-19 07:49:29] 2023-09-19 05:49:08,281 | INFO     | --------------------------------------------------
[2023-09-19 07:49:29] 2023-09-19 05:49:08,281 | INFO     | 
[2023-09-19 07:49:29] 2023-09-19 05:49:08,281 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue jobs had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue payloads had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue data_in had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue data_out had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,289 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | queue completed_jobids has 1 job(s)
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | queue messages had 0 job(s) [purged]
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | job 5966738985 has completed (purged errors)
[2023-09-19 07:49:29] 2023-09-19 05:49:08,290 | INFO     | overall cleanup function is called
[2023-09-19 07:49:29] 2023-09-19 05:49:09,296 | INFO     | --- collectZombieJob: --- 10, [789247]
[2023-09-19 07:49:29] 2023-09-19 05:49:09,296 | INFO     | zombie collector waiting for pid 789247
[2023-09-19 07:49:29] 2023-09-19 05:49:09,296 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-09-19 07:49:29] 2023-09-19 05:49:10,298 | INFO     | collected zombie processes
[2023-09-19 07:49:29] 2023-09-19 05:49:10,298 | INFO     | will now attempt to kill all subprocesses of pid=789247
[2023-09-19 07:49:29] 2023-09-19 05:49:10,325 | INFO     | process IDs to be killed: [789247] (in reverse order)
[2023-09-19 07:49:29] 2023-09-19 05:49:10,340 | WARNING  | found no corresponding commands to process id(s)
[2023-09-19 07:49:29] 2023-09-19 05:49:10,340 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-09-19 07:49:29] 2023-09-19 05:49:10,341 | INFO     | did not find any defunct processes belonging to 789247
[2023-09-19 07:49:29] 2023-09-19 05:49:10,342 | INFO     | did not find any defunct processes belonging to 789247
[2023-09-19 07:49:29] 2023-09-19 05:49:10,342 | INFO     | ready for new job
[2023-09-19 07:49:29] 2023-09-19 05:49:10,342 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-09-19 07:49:29] 2023-09-19 05:49:10,342 | INFO     | **************************************
[2023-09-19 07:49:29] 2023-09-19 05:49:10,343 | INFO     | ***  PanDA Pilot version 3.6.7.10  ***
[2023-09-19 07:49:29] 2023-09-19 05:49:10,343 | INFO     | **************************************
[2023-09-19 07:49:29] 2023-09-19 05:49:10,343 | INFO     | 
[2023-09-19 07:49:29] 2023-09-19 05:49:10,343 | INFO     | pilot is running in a VM
[2023-09-19 07:49:29] 2023-09-19 05:49:10,343 | INFO     | architecture information:
[2023-09-19 07:49:29] 2023-09-19 05:49:10,343 | INFO     | executing command: cat /etc/os-release
[2023-09-19 07:49:29] 2023-09-19 05:49:10,348 | INFO     | cat /etc/os-release:
[2023-09-19 07:49:29] NAME="CentOS Linux"
[2023-09-19 07:49:29] VERSION="7 (Core)"
[2023-09-19 07:49:29] ID="centos"
[2023-09-19 07:49:29] ID_LIKE="rhel fedora"
[2023-09-19 07:49:29] VERSION_ID="7"
[2023-09-19 07:49:29] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-09-19 07:49:29] ANSI_COLOR="0;31"
[2023-09-19 07:49:29] CPE_NAME="cpe:/o:centos:centos:7"
[2023-09-19 07:49:29] HOME_URL="https://www.centos.org/"
[2023-09-19 07:49:29] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-09-19 07:49:29] 
[2023-09-19 07:49:29] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-09-19 07:49:29] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-09-19 07:49:29] REDHAT_SUPPORT_PRODUCT="centos"
[2023-09-19 07:49:29] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-09-19 07:49:29] 
[2023-09-19 07:49:29] 2023-09-19 05:49:10,348 | INFO     | **************************************
[2023-09-19 07:49:29] 2023-09-19 05:49:10,849 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2023-09-19 07:49:29] 2023-09-19 05:49:10,857 | INFO     | sufficient remaining disk space (22787653632 B)
[2023-09-19 07:49:29] 2023-09-19 05:49:10,857 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-09-19 07:49:29] 2023-09-19 05:49:10,857 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-09-19 07:49:29] 2023-09-19 05:49:10,857 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-09-19 07:49:29] 2023-09-19 05:49:10,888 | WARNING  | job monitor detected an abort_job request (signal=None)
[2023-09-19 07:49:29] 2023-09-19 05:49:10,888 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-09-19 07:49:29] 2023-09-19 05:49:10,888 | INFO     | will abort loop
[2023-09-19 07:49:29] 2023-09-19 05:49:11,281 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-09-19 07:49:29] 2023-09-19 05:49:11,281 | INFO     | found 0 job(s) in 20 queues
[2023-09-19 07:49:29] 2023-09-19 05:49:11,282 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-09-19 07:49:29] 2023-09-19 05:49:11,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-09-19 07:49:29] 2023-09-19 05:49:11,858 | INFO     | [job] retrieve thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:11,891 | INFO     | [job] job monitor thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,111 | INFO     | [payload] validate_post thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,200 | INFO     | [job] validate thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,393 | INFO     | [payload] control thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,776 | INFO     | [payload] validate_pre thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,776 | INFO     | [job] create_data_payload thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,776 | INFO     | [payload] execute_payloads thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,834 | INFO     | [data] copytool_in thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,871 | INFO     | [job] control thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:12,871 | INFO     | [data] control thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:13,176 | INFO     | [payload] failed_post thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:13,286 | INFO     | [data] copytool_out thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:13,287 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-09-19 07:49:29] 2023-09-19 05:49:14,303 | INFO     | [job] queue monitor thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:14,858 | INFO     | [data] queue_monitor thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:21,458 | INFO     | job.realtimelogging is not enabled
[2023-09-19 07:49:29] 2023-09-19 05:49:22,459 | INFO     | [payload] run_realtimelog thread has finished
[2023-09-19 07:49:29] 2023-09-19 05:49:24,137 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140506312267584)>', '<ExcThread(monitor, started 140505794983680)>']
[2023-09-19 07:49:29] 2023-09-19 05:49:24,331 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-09-19 07:49:29] 2023-09-19 05:49:24,331 | INFO     | [monitor] control thread has ended
[2023-09-19 07:49:29] 2023-09-19 05:49:29,162 | INFO     | end of generic workflow (traces error code: 0)
[2023-09-19 07:49:29] 2023-09-19 05:49:29,162 | INFO     | traces error code: 0
[2023-09-19 07:49:29] 2023-09-19 05:49:29,162 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-09-19 07:49:29] 2023-09-19 05:49:29,194 [wrapper] ==== pilot stdout END ====
[2023-09-19 07:49:29] 2023-09-19 05:49:29,195 [wrapper] ==== wrapper stdout RESUME ====
[2023-09-19 07:49:29] 2023-09-19 05:49:29,196 [wrapper] pilotpid: 782038
[2023-09-19 07:49:29] 2023-09-19 05:49:29,197 [wrapper] Pilot exit status: 0
[2023-09-19 07:49:29] 2023-09-19 05:49:29,202 [wrapper] pandaids: 5966738985
[2023-09-19 07:49:29] 2023-09-19 05:49:29,205 [wrapper] apfmon messages muted
[2023-09-19 07:49:29] 2023-09-19 05:49:29,205 [wrapper] Test setup, not cleaning
[2023-09-19 07:49:29] 2023-09-19 05:49:29,206 [wrapper] ==== wrapper stdout END ====
[2023-09-19 07:49:29] 2023-09-19 05:49:29,207 [wrapper] ==== wrapper stderr END ====
[2023-09-19 07:49:29] 2023-09-19 05:49:29,209 [wrapper] wrapperexiting ec=0, duration=913
[2023-09-19 07:49:29] 2023-09-19 05:49:29,210 [wrapper] apfmon messages muted
[2023-09-19 07:49:29]  *** Error codes and diagnostics ***
[2023-09-19 07:49:29]     "exeErrorCode": 0,
[2023-09-19 07:49:29]     "exeErrorDiag": "",
[2023-09-19 07:49:29]     "pilotErrorCode": 0,
[2023-09-19 07:49:29]     "pilotErrorDiag": "",
[2023-09-19 07:49:29]  *** Listing of results directory ***
[2023-09-19 07:49:29] insgesamt 43528
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc   428870 19. Sep 06:41 pilot3.tar.gz
[2023-09-19 07:49:29] -rwx------. 1 boinc boinc    27366 19. Sep 07:19 runpilot2-wrapper.sh
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc     4388 19. Sep 07:19 queuedata.json
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc      107 19. Sep 07:34 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-19 07:49:29] -rwxr-xr-x. 1 boinc boinc     7986 19. Sep 07:34 run_atlas
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc      112 19. Sep 07:34 job.xml
[2023-09-19 07:49:29] -rw-r--r--. 2 boinc boinc    17604 19. Sep 07:34 start_atlas.sh
[2023-09-19 07:49:29] drwxrwx--x. 2 boinc boinc       68 19. Sep 07:34 shared
[2023-09-19 07:49:29] -rw-r--r--. 2 boinc boinc   439106 19. Sep 07:34 input.tar.gz
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc     6185 19. Sep 07:34 init_data.xml
[2023-09-19 07:49:29] -rw-r--r--. 2 boinc boinc 37960264 19. Sep 07:34 EVNT.04972714._000040.pool.root.1
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc        0 19. Sep 07:34 boinc_lockfile
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc     2758 19. Sep 07:34 pandaJob.out
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc      424 19. Sep 07:34 setup.sh.local
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc  1004051 19. Sep 07:34 agis_schedconf.cvmfs.json
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc  1388715 19. Sep 07:35 cric_ddmendpoints.json
[2023-09-19 07:49:29] drwx------. 4 boinc boinc     4096 19. Sep 07:35 pilot3
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc      532 19. Sep 07:43 boinc_task_state.xml
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc  1276015 19. Sep 07:43 output.1.4756b3e1-8e3d-4daa-a543-def4c31ef236_23276.pool.root
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc     1004 19. Sep 07:43 memory_monitor_summary.json
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc   154421 19. Sep 07:46 4756b3e1-8e3d-4daa-a543-def4c31ef236_23276.1.job.log.tgz
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc     7337 19. Sep 07:49 heartbeat.json
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc     8192 19. Sep 07:49 boinc_mmap_file
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc       24 19. Sep 07:49 wrapper_checkpoint.txt
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc     4130 19. Sep 07:49 pilotlog.txt
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc   134568 19. Sep 07:49 4756b3e1-8e3d-4daa-a543-def4c31ef236_23276.1.job.log
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc      464 19. Sep 07:49 output.list
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc      748 19. Sep 07:49 runtime_log
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc  1587200 19. Sep 07:49 result.tar.gz
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc    11841 19. Sep 07:49 runtime_log.err
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc      625 19. Sep 07:49 0R2LDmKKi23n7Olcko1bjSoqABFKDmABFKDm7AsVDmIURKDmVmLytn.diag
[2023-09-19 07:49:29] -rw-r--r--. 1 boinc boinc    22816 19. Sep 07:49 stderr.txt
[2023-09-19 07:49:29] HITS file was successfully produced:
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc 1276015 19. Sep 07:43 shared/HITS.pool.root.1
[2023-09-19 07:49:29]  *** Contents of shared directory: ***
[2023-09-19 07:49:29] insgesamt 40324
[2023-09-19 07:49:29] -rw-r--r--. 2 boinc boinc    17604 19. Sep 07:34 start_atlas.sh
[2023-09-19 07:49:29] -rw-r--r--. 2 boinc boinc   439106 19. Sep 07:34 input.tar.gz
[2023-09-19 07:49:29] -rw-r--r--. 2 boinc boinc 37960264 19. Sep 07:34 ATLAS.root_0
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc  1276015 19. Sep 07:43 HITS.pool.root.1
[2023-09-19 07:49:29] -rw-------. 1 boinc boinc  1587200 19. Sep 07:49 result.tar.gz
07:49:30 (777714): run_atlas exited; CPU time 240.440548
07:49:30 (777714): called boinc_finish(0)

</stderr_txt>
]]>


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