Name gR3MDmDRi23n7Olcko1bjSoqABFKDmABFKDm7AsVDmLURKDmrU53Dm_0
Workunit 2332761
Created 19 Sep 2023, 5:26:52 UTC
Sent 19 Sep 2023, 5:34:00 UTC
Report deadline 26 Sep 2023, 5:34:00 UTC
Received 19 Sep 2023, 6:05:59 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4721
Run time 16 min 16 sec
CPU time 4 min 13 sec
Validate state Valid
Credit 19.31
Device peak FLOPS 5.74 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.57 GB
Peak swap size 2.12 GB
Peak disk usage 78.75 MB

Stderr output

<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
07:49:33 (799519): wrapper (7.7.26015): starting
07:49:33 (799519): wrapper: running run_atlas (--nthreads 1)
[2023-09-19 07:49:33] Arguments: --nthreads 1
[2023-09-19 07:49:33] Threads: 1
[2023-09-19 07:49:33] Checking for CVMFS
[2023-09-19 07:49:33] Probing /cvmfs/atlas.cern.ch... OK
[2023-09-19 07:49:33] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-09-19 07:49:33] Running cvmfs_config stat atlas.cern.ch
[2023-09-19 07:49:33] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-09-19 07:49:33] 2.11.0.0 777948 15 43184 123753 0 75 2392168 4096000 0 130560 0 66152 99.997 1031 861 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-09-19 07:49:33] CVMFS is ok
[2023-09-19 07:49:33] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-09-19 07:49:33] Checking for apptainer binary...
[2023-09-19 07:49:33] Using apptainer found in PATH at /usr/bin/apptainer
[2023-09-19 07:49:33] Running /usr/bin/apptainer --version
[2023-09-19 07:49:33] apptainer version 1.2.2-1.el9
[2023-09-19 07:49:33] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-09-19 07:49:33] P620-CentOS9
[2023-09-19 07:49:33] apptainer works
[2023-09-19 07:49:33] Starting ATLAS job with PandaID=5966740158
[2023-09-19 07:49:33] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-09-19 08:05:46]  *** The last 200 lines of the pilot log: ***
[2023-09-19 08:05:46] 2023-09-19 06:04:42,148 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:04:44,651 | INFO     | monitor loop #164: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:04:44,651 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:04:47,154 | INFO     | monitor loop #165: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:04:47,154 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:04:49,657 | INFO     | monitor loop #166: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:04:49,657 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:04:52,161 | INFO     | monitor loop #167: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:04:52,161 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:04:54,664 | INFO     | monitor loop #168: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:04:54,664 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:04:57,165 | INFO     | monitor loop #169: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:04:57,165 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:04:59,668 | INFO     | monitor loop #170: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:04:59,668 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:02,171 | INFO     | monitor loop #171: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:05:02,171 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:04,674 | INFO     | monitor loop #172: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:05:04,675 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:07,177 | INFO     | monitor loop #173: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:05:07,177 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:09,679 | INFO     | monitor loop #174: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:05:09,680 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:12,183 | INFO     | monitor loop #175: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:05:12,183 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:14,686 | INFO     | monitor loop #176: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:05:14,686 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:16,868 | INFO     | 939s have passed since pilot start
[2023-09-19 08:05:46] 2023-09-19 06:05:17,187 | INFO     | monitor loop #177: job 0:5966740158 is in state 'stageout'
[2023-09-19 08:05:46] 2023-09-19 06:05:17,188 | WARNING  | aborting job monitor tasks since payload process 810460 is not running
[2023-09-19 08:05:46] 2023-09-19 06:05:18,582 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-09-19 08:05:46] 2023-09-19 06:05:18,679 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-09-19 08:05:46] 2023-09-19 06:05:18,680 | WARNING  | cache file=/var/lib/boinc/slots/2/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/2/agis_ddmendpoints.
[2023-09-19 08:05:46] 2023-09-19 06:05:18,708 | INFO     | transferring file fdb83753-1da9-46d2-9944-bca37e78348e_7864.1.job.log.tgz from /var/lib/boinc/slots/2/PanDA_Pilot-5966740158/fdb83753-1da9-46d2-9944-bca37e78348e_7
[2023-09-19 08:05:46] 2023-09-19 06:05:18,709 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/2/PanDA_Pilot-5966740158/fdb83753-1da9-46d2-9944-bca37e78348e_7864.1.job.log.tgz /var/lib/boinc/slots/2/fdb
[2023-09-19 08:05:46] 2023-09-19 06:05:18,718 | INFO     | Adding to output.list: fdb83753-1da9-46d2-9944-bca37e78348e_7864.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/0d/8a/fdb83753-1da9-4
[2023-09-19 08:05:46] 2023-09-19 06:05:18,718 | INFO     | summary of transferred files:
[2023-09-19 08:05:46] 2023-09-19 06:05:18,718 | INFO     |  -- lfn=fdb83753-1da9-46d2-9944-bca37e78348e_7864.1.job.log.tgz, status_code=0, status=transferred
[2023-09-19 08:05:46] 2023-09-19 06:05:18,719 | INFO     | stage-out finished correctly
[2023-09-19 08:05:46] 2023-09-19 06:05:19,690 | INFO     | monitor loop #178: job 0:5966740158 is in state 'finished'
[2023-09-19 08:05:46] 2023-09-19 06:05:19,691 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-19 08:05:46] 2023-09-19 06:05:20,914 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-09-19 08:05:46] 2023-09-19 06:05:21,337 | INFO     | job 5966740158 has state=finished
[2023-09-19 08:05:46] 2023-09-19 06:05:21,337 | INFO     | preparing for final server update for job 5966740158 in state='finished'
[2023-09-19 08:05:46] 2023-09-19 06:05:21,337 | INFO     | this job has now completed (state=finished)
[2023-09-19 08:05:46] 2023-09-19 06:05:21,338 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-09-19 08:05:46] 2023-09-19 06:05:21,338 | INFO     | job 5966740158 has finished - writing final server update
[2023-09-19 08:05:46] 2023-09-19 06:05:21,338 | WARNING  | wrong length of table data, x=[1695102780.0, 1695102841.0, 1695102902.0, 1695102963.0, 1695103024.0, 1695103085.0], y=[2001.0, 865440.0, 1102344.0, 1384480.0, 1724
[2023-09-19 08:05:46] 2023-09-19 06:05:21,338 | INFO     | total number of processed events: 2 (read)
[2023-09-19 08:05:46] 2023-09-19 06:05:21,339 | INFO     | executing command: lscpu
[2023-09-19 08:05:46] 2023-09-19 06:05:21,347 | INFO     | found 1 cores (1 cores per socket, 1 sockets)
[2023-09-19 08:05:46] 2023-09-19 06:05:21,347 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-09-19 08:05:46] 2023-09-19 06:05:21,356 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-09-19 08:05:46] 2023-09-19 06:05:22,193 | INFO     | monitor loop #179: job 0:5966740158 is in state 'finished'
[2023-09-19 08:05:46] 2023-09-19 06:05:22,193 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-19 08:05:46] 2023-09-19 06:05:24,697 | INFO     | monitor loop #180: job 0:5966740158 is in state 'finished'
[2023-09-19 08:05:46] 2023-09-19 06:05:24,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-09-19 08:05:46] 2023-09-19 06:05:24,847 | INFO     | CPU arch script returned: x86-64-v2
[2023-09-19 08:05:46] 2023-09-19 06:05:24,847 | INFO     | using path: /var/lib/boinc/slots/2/PanDA_Pilot-5966740158/memory_monitor_summary.json (trf name=prmon)
[2023-09-19 08:05:46] 2023-09-19 06:05:24,847 | INFO     | extracted standard info from prmon json
[2023-09-19 08:05:46] 2023-09-19 06:05:24,847 | INFO     | extracted standard memory fields from prmon json
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | ..............................
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . Timing measurements:
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . get job = 63 s
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . initial setup = 65 s
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . payload setup = 3 s
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . stage-in = 59 s
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . payload execution = 370 s
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . stage-out = 369 s
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | . log creation = 0 s
[2023-09-19 08:05:46] 2023-09-19 06:05:24,848 | INFO     | ..............................
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | 
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | job summary report
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | --------------------------------------------------
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | PanDA job id: 5966740158
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | task id: NULL
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | errors: (none)
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | status: LOG_TRANSFER = DONE 
[2023-09-19 08:05:46] 2023-09-19 06:05:25,293 | INFO     | pilot state: finished 
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | transexitcode: 0
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | exeerrorcode: 0
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | exeerrordiag: 
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | exitcode: 0
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | exitmsg: OK
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | cpuconsumptiontime: 258 s
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | nevents: 2
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | neventsw: 0
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | pid: 810460
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | pgrp: 810460
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | corecount: 1
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | event service: False
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | sizes: {0: 2487803, 11: 2487949, 21: 2487977, 32: 2488005, 42: 2488033, 53: 2488061, 61: 2488277, 64: 2488305, 377: 2508955, 747: 2518001, 749: 2518057, 753: 25185
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | --------------------------------------------------
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | 
[2023-09-19 08:05:46] 2023-09-19 06:05:25,294 | INFO     | executing command: ls -lF /var/lib/boinc/slots/2
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue jobs had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue payloads had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue data_in had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue data_out had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue completed_jobids has 1 job(s)
[2023-09-19 08:05:46] 2023-09-19 06:05:25,303 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,304 | INFO     | queue messages had 0 job(s) [purged]
[2023-09-19 08:05:46] 2023-09-19 06:05:25,304 | INFO     | job 5966740158 has completed (purged errors)
[2023-09-19 08:05:46] 2023-09-19 06:05:25,304 | INFO     | overall cleanup function is called
[2023-09-19 08:05:46] 2023-09-19 06:05:26,310 | INFO     | --- collectZombieJob: --- 10, [810460]
[2023-09-19 08:05:46] 2023-09-19 06:05:26,310 | INFO     | zombie collector waiting for pid 810460
[2023-09-19 08:05:46] 2023-09-19 06:05:26,310 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-09-19 08:05:46] 2023-09-19 06:05:27,315 | INFO     | collected zombie processes
[2023-09-19 08:05:46] 2023-09-19 06:05:27,315 | INFO     | will now attempt to kill all subprocesses of pid=810460
[2023-09-19 08:05:46] 2023-09-19 06:05:27,342 | INFO     | process IDs to be killed: [810460] (in reverse order)
[2023-09-19 08:05:46] 2023-09-19 06:05:27,357 | WARNING  | found no corresponding commands to process id(s)
[2023-09-19 08:05:46] 2023-09-19 06:05:27,357 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-09-19 08:05:46] 2023-09-19 06:05:27,358 | INFO     | did not find any defunct processes belonging to 810460
[2023-09-19 08:05:46] 2023-09-19 06:05:27,359 | INFO     | did not find any defunct processes belonging to 810460
[2023-09-19 08:05:46] 2023-09-19 06:05:27,359 | INFO     | ready for new job
[2023-09-19 08:05:46] 2023-09-19 06:05:27,359 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-09-19 08:05:46] 2023-09-19 06:05:27,360 | INFO     | **************************************
[2023-09-19 08:05:46] 2023-09-19 06:05:27,360 | INFO     | ***  PanDA Pilot version 3.6.7.10  ***
[2023-09-19 08:05:46] 2023-09-19 06:05:27,360 | INFO     | **************************************
[2023-09-19 08:05:46] 2023-09-19 06:05:27,360 | INFO     | 
[2023-09-19 08:05:46] 2023-09-19 06:05:27,360 | INFO     | pilot is running in a VM
[2023-09-19 08:05:46] 2023-09-19 06:05:27,360 | INFO     | architecture information:
[2023-09-19 08:05:46] 2023-09-19 06:05:27,360 | INFO     | executing command: cat /etc/os-release
[2023-09-19 08:05:46] 2023-09-19 06:05:27,365 | INFO     | cat /etc/os-release:
[2023-09-19 08:05:46] NAME="CentOS Linux"
[2023-09-19 08:05:46] VERSION="7 (Core)"
[2023-09-19 08:05:46] ID="centos"
[2023-09-19 08:05:46] ID_LIKE="rhel fedora"
[2023-09-19 08:05:46] VERSION_ID="7"
[2023-09-19 08:05:46] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-09-19 08:05:46] ANSI_COLOR="0;31"
[2023-09-19 08:05:46] CPE_NAME="cpe:/o:centos:centos:7"
[2023-09-19 08:05:46] HOME_URL="https://www.centos.org/"
[2023-09-19 08:05:46] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-09-19 08:05:46] 
[2023-09-19 08:05:46] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-09-19 08:05:46] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-09-19 08:05:46] REDHAT_SUPPORT_PRODUCT="centos"
[2023-09-19 08:05:46] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-09-19 08:05:46] 
[2023-09-19 08:05:46] 2023-09-19 06:05:27,365 | INFO     | **************************************
[2023-09-19 08:05:46] 2023-09-19 06:05:27,868 | INFO     | executing command: df -mP /var/lib/boinc/slots/2
[2023-09-19 08:05:46] 2023-09-19 06:05:27,875 | INFO     | sufficient remaining disk space (22786605056 B)
[2023-09-19 08:05:46] 2023-09-19 06:05:27,875 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-09-19 08:05:46] 2023-09-19 06:05:27,875 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-09-19 08:05:46] 2023-09-19 06:05:27,875 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-09-19 08:05:46] 2023-09-19 06:05:27,907 | INFO     | found 0 job(s) in 20 queues
[2023-09-19 08:05:46] 2023-09-19 06:05:27,907 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-09-19 08:05:46] 2023-09-19 06:05:27,907 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-09-19 08:05:46] 2023-09-19 06:05:28,202 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-09-19 08:05:46] 2023-09-19 06:05:28,203 | INFO     | aborting loop
[2023-09-19 08:05:46] 2023-09-19 06:05:28,875 | INFO     | [job] retrieve thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,082 | INFO     | [payload] control thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,149 | INFO     | [data] copytool_in thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,208 | INFO     | [job] job monitor thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,252 | INFO     | [payload] failed_post thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,288 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-09-19 08:05:46] 2023-09-19 06:05:29,293 | INFO     | [job] validate thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,510 | INFO     | [payload] validate_pre thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,510 | INFO     | [job] create_data_payload thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,727 | INFO     | [payload] validate_post thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,731 | INFO     | [payload] execute_payloads thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,810 | INFO     | [job] control thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,828 | INFO     | [data] control thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:29,909 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-09-19 08:05:46] 2023-09-19 06:05:30,914 | INFO     | [job] queue monitor thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:31,293 | INFO     | [data] copytool_out thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:31,881 | INFO     | [data] queue_monitor thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:38,665 | INFO     | job.realtimelogging is not enabled
[2023-09-19 08:05:46] 2023-09-19 06:05:39,671 | INFO     | [payload] run_realtimelog thread has finished
[2023-09-19 08:05:46] 2023-09-19 06:05:41,469 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140447747123008)>', '<ExcThread(monitor, started 140447225730816)>']
[2023-09-19 08:05:46] 2023-09-19 06:05:41,949 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-09-19 08:05:46] 2023-09-19 06:05:41,949 | INFO     | [monitor] control thread has ended
[2023-09-19 08:05:46] 2023-09-19 06:05:46,493 | INFO     | end of generic workflow (traces error code: 0)
[2023-09-19 08:05:46] 2023-09-19 06:05:46,493 | INFO     | traces error code: 0
[2023-09-19 08:05:46] 2023-09-19 06:05:46,493 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-09-19 08:05:46] 2023-09-19 06:05:46,528 [wrapper] ==== pilot stdout END ====
[2023-09-19 08:05:46] 2023-09-19 06:05:46,529 [wrapper] ==== wrapper stdout RESUME ====
[2023-09-19 08:05:46] 2023-09-19 06:05:46,530 [wrapper] pilotpid: 803239
[2023-09-19 08:05:46] 2023-09-19 06:05:46,531 [wrapper] Pilot exit status: 0
[2023-09-19 08:05:46] 2023-09-19 06:05:46,536 [wrapper] pandaids: 5966740158
[2023-09-19 08:05:46] 2023-09-19 06:05:46,538 [wrapper] apfmon messages muted
[2023-09-19 08:05:46] 2023-09-19 06:05:46,539 [wrapper] Test setup, not cleaning
[2023-09-19 08:05:46] 2023-09-19 06:05:46,540 [wrapper] ==== wrapper stdout END ====
[2023-09-19 08:05:46] 2023-09-19 06:05:46,541 [wrapper] ==== wrapper stderr END ====
[2023-09-19 08:05:46] 2023-09-19 06:05:46,543 [wrapper] wrapperexiting ec=0, duration=973
[2023-09-19 08:05:46] 2023-09-19 06:05:46,544 [wrapper] apfmon messages muted
[2023-09-19 08:05:46]  *** Error codes and diagnostics ***
[2023-09-19 08:05:46]     "exeErrorCode": 0,
[2023-09-19 08:05:46]     "exeErrorDiag": "",
[2023-09-19 08:05:46]     "pilotErrorCode": 0,
[2023-09-19 08:05:46]     "pilotErrorDiag": "",
[2023-09-19 08:05:46]  *** Listing of results directory ***
[2023-09-19 08:05:46] insgesamt 43524
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc   428870 19. Sep 06:41 pilot3.tar.gz
[2023-09-19 08:05:46] -rwx------. 1 boinc boinc    27366 19. Sep 07:26 runpilot2-wrapper.sh
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc     4388 19. Sep 07:26 queuedata.json
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc      107 19. Sep 07:49 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-19 08:05:46] -rwxr-xr-x. 1 boinc boinc     7986 19. Sep 07:49 run_atlas
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc      112 19. Sep 07:49 job.xml
[2023-09-19 08:05:46] -rw-r--r--. 2 boinc boinc    17600 19. Sep 07:49 start_atlas.sh
[2023-09-19 08:05:46] drwxrwx--x. 2 boinc boinc       68 19. Sep 07:49 shared
[2023-09-19 08:05:46] -rw-r--r--. 2 boinc boinc   439109 19. Sep 07:49 input.tar.gz
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc     6185 19. Sep 07:49 init_data.xml
[2023-09-19 08:05:46] -rw-r--r--. 2 boinc boinc 37960264 19. Sep 07:49 EVNT.04972714._000040.pool.root.1
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc        0 19. Sep 07:49 boinc_lockfile
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc     2753 19. Sep 07:49 pandaJob.out
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc      424 19. Sep 07:49 setup.sh.local
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc  1388715 19. Sep 07:50 cric_ddmendpoints.json
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc  1004051 19. Sep 07:50 agis_schedconf.cvmfs.json
[2023-09-19 08:05:46] drwx------. 4 boinc boinc     4096 19. Sep 07:51 pilot3
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc  1276022 19. Sep 07:58 output.1.fdb83753-1da9-46d2-9944-bca37e78348e_7864.pool.root
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc     1002 19. Sep 07:59 memory_monitor_summary.json
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc      532 19. Sep 07:59 boinc_task_state.xml
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc   153428 19. Sep 08:02 fdb83753-1da9-46d2-9944-bca37e78348e_7864.1.job.log.tgz
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc     7332 19. Sep 08:05 heartbeat.json
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc       24 19. Sep 08:05 wrapper_checkpoint.txt
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc     8192 19. Sep 08:05 boinc_mmap_file
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc     4035 19. Sep 08:05 pilotlog.txt
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc   134535 19. Sep 08:05 fdb83753-1da9-46d2-9944-bca37e78348e_7864.1.job.log
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc      460 19. Sep 08:05 output.list
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc      744 19. Sep 08:05 runtime_log
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc  1587200 19. Sep 08:05 result.tar.gz
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc    11807 19. Sep 08:05 runtime_log.err
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc      623 19. Sep 08:05 gR3MDmDRi23n7Olcko1bjSoqABFKDmABFKDm7AsVDmLURKDmrU53Dm.diag
[2023-09-19 08:05:46] -rw-r--r--. 1 boinc boinc    22737 19. Sep 08:05 stderr.txt
[2023-09-19 08:05:46] HITS file was successfully produced:
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc 1276022 19. Sep 07:58 shared/HITS.pool.root.1
[2023-09-19 08:05:46]  *** Contents of shared directory: ***
[2023-09-19 08:05:46] insgesamt 40324
[2023-09-19 08:05:46] -rw-r--r--. 2 boinc boinc    17600 19. Sep 07:49 start_atlas.sh
[2023-09-19 08:05:46] -rw-r--r--. 2 boinc boinc   439109 19. Sep 07:49 input.tar.gz
[2023-09-19 08:05:46] -rw-r--r--. 2 boinc boinc 37960264 19. Sep 07:49 ATLAS.root_0
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc  1276022 19. Sep 07:58 HITS.pool.root.1
[2023-09-19 08:05:46] -rw-------. 1 boinc boinc  1587200 19. Sep 08:05 result.tar.gz
08:05:48 (799519): run_atlas exited; CPU time 253.404762
08:05:48 (799519): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN