| Name | tbrMDmwHk23n7Olcko1bjSoqABFKDmABFKDm7AsVDmjURKDmICm9qm_0 |
| Workunit | 2332775 |
| Created | 19 Sep 2023, 7:25:25 UTC |
| Sent | 19 Sep 2023, 7:27:35 UTC |
| Report deadline | 26 Sep 2023, 7:27:35 UTC |
| Received | 19 Sep 2023, 7:53:50 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4721 |
| Run time | 17 min 12 sec |
| CPU time | 4 min 45 sec |
| Validate state | Valid |
| Credit | 20.43 |
| Device peak FLOPS | 5.74 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.57 GB |
| Peak swap size | 2.12 GB |
| Peak disk usage | 71.39 MB |
Stderr output
<core_client_version>7.20.2</core_client_version>
<![CDATA[
<stderr_txt>
09:36:21 (71793): wrapper (7.7.26015): starting
09:36:21 (71793): wrapper: running run_atlas (--nthreads 1)
[2023-09-19 09:36:21] Arguments: --nthreads 1
[2023-09-19 09:36:21] Threads: 1
[2023-09-19 09:36:21] Checking for CVMFS
[2023-09-19 09:36:21] Probing /cvmfs/atlas.cern.ch... OK
[2023-09-19 09:36:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-09-19 09:36:21] Running cvmfs_config stat atlas.cern.ch
[2023-09-19 09:36:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-09-19 09:36:21] 2.11.0.0 50309 17 41464 123756 2 15 2400967 4096001 0 130560 0 66300 99.999 964 56 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://128.142.161.84:3126 1
[2023-09-19 09:36:21] CVMFS is ok
[2023-09-19 09:36:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-09-19 09:36:21] Checking for apptainer binary...
[2023-09-19 09:36:21] Using apptainer found in PATH at /usr/bin/apptainer
[2023-09-19 09:36:21] Running /usr/bin/apptainer --version
[2023-09-19 09:36:21] apptainer version 1.2.2-1.el9
[2023-09-19 09:36:21] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-09-19 09:36:22] P620-CentOS9
[2023-09-19 09:36:22] apptainer works
[2023-09-19 09:36:22] Starting ATLAS job with PandaID=5966832561
[2023-09-19 09:36:22] Running command: /usr/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-09-19 09:53:30] *** The last 200 lines of the pilot log: ***
[2023-09-19 09:53:30] 2023-09-19 07:53:11,025 | INFO | pilot.util.timing | timing_report | . stage-out = 385 s
[2023-09-19 09:53:30] 2023-09-19 07:53:11,025 | INFO | pilot.util.timing | timing_report | . log creation = 0 s
[2023-09-19 09:53:30] 2023-09-19 07:53:11,025 | INFO | pilot.util.timing | timing_report | ..............................
[2023-09-19 09:53:30] 2023-09-19 07:53:11,025 | DEBUG | pilot.control.job | add_timing_and_extracts | could have reported time_log_creation=0 s
[2023-09-19 09:53:30] 2023-09-19 07:53:11,025 | DEBUG | pilot.control.job | send_state | data={'jobId': '5966832561', 'state': 'finished', 'timestamp': '2023-09-19T09:52:58+01:00', 'siteNam
[2023-09-19 09:53:30] 2023-09-19 07:53:11,026 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5966832561', 'state': 'finished', 'timestamp': '2023-09-19T09:52:58
[2023-09-19 09:53:30] 2023-09-19 07:53:11,026 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/2/heartbeat.json
[2023-09-19 09:53:30] 2023-09-19 07:53:11,026 | DEBUG | pilot.control.job | queue_monitor | job.completed=False
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report |
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | job summary report
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | PanDA job id: 5966832561
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 290 s
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | pid: 82717
[2023-09-19 09:53:30] 2023-09-19 07:53:11,079 | INFO | pilot.control.job | make_job_report | pgrp: 82717
[2023-09-19 09:53:30] 2023-09-19 07:53:11,080 | INFO | pilot.control.job | make_job_report | corecount: 1
[2023-09-19 09:53:30] 2023-09-19 07:53:11,080 | INFO | pilot.control.job | make_job_report | event service: False
[2023-09-19 09:53:30] 2023-09-19 07:53:11,080 | INFO | pilot.control.job | make_job_report | sizes: {0: 2487605, 11: 2487751, 21: 2487779, 32: 2487807, 35: 2487895, 42: 2487923, 413: 2508813, 7
[2023-09-19 09:53:30] 2023-09-19 07:53:11,080 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-09-19 09:53:30] 2023-09-19 07:53:11,080 | INFO | pilot.control.job | make_job_report |
[2023-09-19 09:53:30] 2023-09-19 07:53:11,080 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/2:
[2023-09-19 09:53:30]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,080 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/2
[2023-09-19 09:53:30] 2023-09-19 07:53:11,086 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | DEBUG | pilot.control.job | has_job_completed | total 42116
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 346563 Sep 19 09:53 9c9c174b-50d9-44b0-978d-704a783f7cb2_2707.1.job.log
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 163170 Sep 19 09:49 9c9c174b-50d9-44b0-978d-704a783f7cb2_2707.1.job.log.tgz
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 36949600 Sep 19 09:36 EVNT.04972714._000039.pool.root.1
[2023-09-19 09:53:30] drwxrwx---. 2 boinc boinc 4096 Sep 19 09:52 PanDA_Pilot-5966832561/
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1003669 Sep 19 09:37 agis_schedconf.cvmfs.json
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 0 Sep 19 09:36 boinc_lockfile
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 8192 Sep 19 09:52 boinc_mmap_file
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 532 Sep 19 09:46 boinc_task_state.xml
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1388715 Sep 19 09:37 cric_ddmendpoints.json
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 7344 Sep 19 09:53 heartbeat.json
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 6185 Sep 19 09:36 init_data.xml
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 447317 Sep 19 09:36 input.tar.gz
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 112 Sep 19 09:36 job.xml
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1012 Sep 19 09:46 memory_monitor_summary.json
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1585201 Sep 19 09:46 output.1.9c9c174b-50d9-44b0-978d-704a783f7cb2_2707.pool.root
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 460 Sep 19 09:52 output.list
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 2658 Sep 19 09:36 pandaJob.out
[2023-09-19 09:53:30] drwx------. 4 boinc boinc 4096 Sep 19 09:38 pilot3/
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 435920 Sep 19 09:25 pilot3.tar.gz
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 331745 Sep 19 09:53 pilotlog.txt
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 4388 Sep 19 09:25 queuedata.json
[2023-09-19 09:53:30] -rwxr-xr-x. 1 boinc boinc 7986 Sep 19 09:36 run_atlas*
[2023-09-19 09:53:30] -rwx------. 1 boinc boinc 27364 Sep 19 09:25 runpilot2-wrapper.sh*
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 407 Sep 19 09:36 runtime_log
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 7725 Sep 19 09:36 runtime_log.err
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 424 Sep 19 09:36 setup.sh.local
[2023-09-19 09:53:30] drwxrwx--x. 2 boinc boinc 68 Sep 19 09:36 shared/
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 17628 Sep 19 09:36 start_atlas.sh
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 1643 Sep 19 09:36 stderr.txt
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 135 Sep 19 09:36 tbrMDmwHk23n7Olcko1bjSoqABFKDmABFKDm7AsVDmjURKDmICm9qm.diag
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 107 Sep 19 09:36 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 24 Sep 19 09:52 wrapper_checkpoint.txt
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-09-19 09:53:30] 2023-09-19 07:53:11,089 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,090 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-09-19 09:53:30] 2023-09-19 07:53:11,090 | INFO | pilot.control.job | has_job_completed | job 5966832561 has completed (purged errors)
[2023-09-19 09:53:30] 2023-09-19 07:53:11,090 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-09-19 09:53:30] 2023-09-19 07:53:11,090 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-09-19 09:53:30] 2023-09-19 07:53:11,091 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/2/PanDA_Pilot-5966832561
[2023-09-19 09:53:30] 2023-09-19 07:53:12,096 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [82717]
[2023-09-19 09:53:30] 2023-09-19 07:53:12,096 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 82717
[2023-09-19 09:53:30] 2023-09-19 07:53:12,096 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-09-19 09:53:30] 2023-09-19 07:53:13,101 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-09-19 09:53:30] 2023-09-19 07:53:13,101 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=82717
[2023-09-19 09:53:30] 2023-09-19 07:53:13,109 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-19 09:53:30] 2023-09-19 07:53:13,129 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [82717] (in reverse order)
[2023-09-19 09:53:30] 2023-09-19 07:53:13,136 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-19 09:53:30] 2023-09-19 07:53:13,145 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-09-19 09:53:30] 2023-09-19 07:53:13,145 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-09-19 09:53:30] 2023-09-19 07:53:13,146 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 82717
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 82717
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | INFO | pilot.control.job | retrieve | ready for new job
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.7.10 ***
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-09-19 09:53:30] 2023-09-19 07:53:13,147 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-09-19 09:53:30] 2023-09-19 07:53:13,148 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-09-19 09:53:30] 2023-09-19 07:53:13,148 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-09-19 09:53:30] 2023-09-19 07:53:13,148 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2023-09-19 09:53:30] 2023-09-19 07:53:13,153 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-19 09:53:30] 2023-09-19 07:53:13,154 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2023-09-19 09:53:30] NAME="CentOS Linux"
[2023-09-19 09:53:30] VERSION="7 (Core)"
[2023-09-19 09:53:30] ID="centos"
[2023-09-19 09:53:30] ID_LIKE="rhel fedora"
[2023-09-19 09:53:30] VERSION_ID="7"
[2023-09-19 09:53:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-09-19 09:53:30] ANSI_COLOR="0;31"
[2023-09-19 09:53:30] CPE_NAME="cpe:/o:centos:centos:7"
[2023-09-19 09:53:30] HOME_URL="https://www.centos.org/"
[2023-09-19 09:53:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-09-19 09:53:30]
[2023-09-19 09:53:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-09-19 09:53:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-09-19 09:53:30] REDHAT_SUPPORT_PRODUCT="centos"
[2023-09-19 09:53:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-09-19 09:53:30]
[2023-09-19 09:53:30] 2023-09-19 07:53:13,154 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-09-19 09:53:30] 2023-09-19 07:53:13,656 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/2
[2023-09-19 09:53:30] 2023-09-19 07:53:13,656 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/2
[2023-09-19 09:53:30] 2023-09-19 07:53:13,663 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s
[2023-09-19 09:53:30] 2023-09-19 07:53:13,664 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-09-19 09:53:30] /dev/mapper/cs-root 31213 9391 21822 31% /var/lib/boinc/slots/2
[2023-09-19 09:53:30] 2023-09-19 07:53:13,664 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-09-19 09:53:30] 2023-09-19 07:53:13,664 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (22882025472 B)
[2023-09-19 09:53:30] 2023-09-19 07:53:13,665 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-09-19 09:53:30] 2023-09-19 07:53:13,665 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-09-19 09:53:30] 2023-09-19 07:53:13,665 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-09-19 09:53:30] 2023-09-19 07:53:13,665 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-09-19 09:53:30] 2023-09-19 07:53:13,665 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues
[2023-09-19 09:53:30] 2023-09-19 07:53:13,665 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set
[2023-09-19 09:53:30] 2023-09-19 07:53:13,665 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish
[2023-09-19 09:53:30] 2023-09-19 07:53:13,858 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2023-09-19 09:53:30] 2023-09-19 07:53:13,858 | INFO | pilot.control.job | job_monitor | aborting loop
[2023-09-19 09:53:30] 2023-09-19 07:53:14,180 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-09-19 09:53:30] 2023-09-19 07:53:14,549 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-09-19 09:53:30] 2023-09-19 07:53:14,665 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:14,683 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-09-19 09:53:30] 2023-09-19 07:53:14,863 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:14,936 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,114 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,114 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,186 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,196 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,394 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,442 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-09-19 09:53:30] 2023-09-19 07:53:15,553 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,618 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,670 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,688 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:15,930 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:16,084 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-09-19 09:53:30] 2023-09-19 07:53:17,089 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:19,447 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:24,144 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-09-19 09:53:30] 2023-09-19 07:53:24,145 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-09-19 09:53:30] 2023-09-19 07:53:24,145 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-09-19 09:53:30] 2023-09-19 07:53:25,150 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-09-19 09:53:30] 2023-09-19 07:53:25,186 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140375
[2023-09-19 09:53:30] 2023-09-19 07:53:25,186 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted
[2023-09-19 09:53:30] 2023-09-19 07:53:25,713 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring
[2023-09-19 09:53:30] 2023-09-19 07:53:25,713 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-09-19 09:53:30] 2023-09-19 07:53:30,205 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-09-19 09:53:30] 2023-09-19 07:53:30,205 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-09-19 09:53:30] 2023-09-19 07:53:30,205 | DEBUG | root | <module> | trace=<class 'pilot.workflow.generic.traces'>
[2023-09-19 09:53:30] 2023-09-19 07:53:30,226 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(75522)---pstree(92831)
[2023-09-19 09:53:30]
[2023-09-19 09:53:30] 2023-09-19 07:53:30,226 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[75522, 92831]
[2023-09-19 09:53:30] 2023-09-19 07:53:30,238 | DEBUG | pilot.util.processgroups | is_defunct | 75522: return code=0, stdout=SN
[2023-09-19 09:53:30] , stderr=
[2023-09-19 09:53:30] 2023-09-19 07:53:30,247 | DEBUG | pilot.util.processgroups | is_defunct | 92831: return code=1, stdout=, stderr=
[2023-09-19 09:53:30] 2023-09-19 07:53:30,248 | INFO | root | list_zombies | no defunct processes were found
[2023-09-19 09:53:30] 2023-09-19 07:53:30,248 | INFO | root | wrap_up | traces error code: 0
[2023-09-19 09:53:30] 2023-09-19 07:53:30,248 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0)
[2023-09-19 09:53:30] 2023-09-19 07:53:30,287 [wrapper] ==== pilot stdout END ====
[2023-09-19 09:53:30] 2023-09-19 07:53:30,288 [wrapper] ==== wrapper stdout RESUME ====
[2023-09-19 09:53:30] 2023-09-19 07:53:30,289 [wrapper] pilotpid: 75522
[2023-09-19 09:53:30] 2023-09-19 07:53:30,290 [wrapper] Pilot exit status: 0
[2023-09-19 09:53:30] 2023-09-19 07:53:30,296 [wrapper] pandaids: 5966832561
[2023-09-19 09:53:30] 2023-09-19 07:53:30,298 [wrapper] apfmon messages muted
[2023-09-19 09:53:30] 2023-09-19 07:53:30,299 [wrapper] Test setup, not cleaning
[2023-09-19 09:53:30] 2023-09-19 07:53:30,300 [wrapper] ==== wrapper stdout END ====
[2023-09-19 09:53:30] 2023-09-19 07:53:30,301 [wrapper] ==== wrapper stderr END ====
[2023-09-19 09:53:30] 2023-09-19 07:53:30,303 [wrapper] wrapperexiting ec=0, duration=1028
[2023-09-19 09:53:30] 2023-09-19 07:53:30,304 [wrapper] apfmon messages muted
[2023-09-19 09:53:30] *** Error codes and diagnostics ***
[2023-09-19 09:53:30] "exeErrorCode": 0,
[2023-09-19 09:53:30] "exeErrorDiag": "",
[2023-09-19 09:53:30] "pilotErrorCode": 0,
[2023-09-19 09:53:30] "pilotErrorDiag": "",
[2023-09-19 09:53:30] *** Listing of results directory ***
[2023-09-19 09:53:30] insgesamt 43636
[2023-09-19 09:53:30] -rwx------. 1 boinc boinc 27364 19. Sep 09:25 runpilot2-wrapper.sh
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 4388 19. Sep 09:25 queuedata.json
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 435920 19. Sep 09:25 pilot3.tar.gz
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 107 19. Sep 09:36 wrapper_26015_x86_64-pc-linux-gnu
[2023-09-19 09:53:30] -rwxr-xr-x. 1 boinc boinc 7986 19. Sep 09:36 run_atlas
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 112 19. Sep 09:36 job.xml
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 36949600 19. Sep 09:36 EVNT.04972714._000039.pool.root.1
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 17628 19. Sep 09:36 start_atlas.sh
[2023-09-19 09:53:30] drwxrwx--x. 2 boinc boinc 68 19. Sep 09:36 shared
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 447317 19. Sep 09:36 input.tar.gz
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 6185 19. Sep 09:36 init_data.xml
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 0 19. Sep 09:36 boinc_lockfile
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 2658 19. Sep 09:36 pandaJob.out
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 424 19. Sep 09:36 setup.sh.local
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1388715 19. Sep 09:37 cric_ddmendpoints.json
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1003669 19. Sep 09:37 agis_schedconf.cvmfs.json
[2023-09-19 09:53:30] drwx------. 4 boinc boinc 4096 19. Sep 09:38 pilot3
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1585201 19. Sep 09:46 output.1.9c9c174b-50d9-44b0-978d-704a783f7cb2_2707.pool.root
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1012 19. Sep 09:46 memory_monitor_summary.json
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 532 19. Sep 09:46 boinc_task_state.xml
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 163170 19. Sep 09:49 9c9c174b-50d9-44b0-978d-704a783f7cb2_2707.1.job.log.tgz
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 7344 19. Sep 09:53 heartbeat.json
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 25 19. Sep 09:53 wrapper_checkpoint.txt
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 8192 19. Sep 09:53 boinc_mmap_file
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 9657 19. Sep 09:53 pilotlog.txt
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 364844 19. Sep 09:53 9c9c174b-50d9-44b0-978d-704a783f7cb2_2707.1.job.log
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 460 19. Sep 09:53 output.list
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 744 19. Sep 09:53 runtime_log
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 2129920 19. Sep 09:53 result.tar.gz
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 629 19. Sep 09:53 tbrMDmwHk23n7Olcko1bjSoqABFKDmABFKDm7AsVDmjURKDmICm9qm.diag
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 11816 19. Sep 09:53 runtime_log.err
[2023-09-19 09:53:30] -rw-r--r--. 1 boinc boinc 29074 19. Sep 09:53 stderr.txt
[2023-09-19 09:53:30] HITS file was successfully produced:
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1585201 19. Sep 09:46 shared/HITS.pool.root.1
[2023-09-19 09:53:30] *** Contents of shared directory: ***
[2023-09-19 09:53:30] insgesamt 40176
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 36949600 19. Sep 09:36 ATLAS.root_0
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 17628 19. Sep 09:36 start_atlas.sh
[2023-09-19 09:53:30] -rw-r--r--. 2 boinc boinc 447317 19. Sep 09:36 input.tar.gz
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 1585201 19. Sep 09:46 HITS.pool.root.1
[2023-09-19 09:53:30] -rw-------. 1 boinc boinc 2129920 19. Sep 09:53 result.tar.gz
09:53:31 (71793): run_atlas exited; CPU time 285.587390
09:53:31 (71793): called boinc_finish(0)
</stderr_txt>
]]>
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