Name VETMDmfhN73n7Olcko1bjSoqABFKDmABFKDm7AsVDm09RKDmx1G8Lo_0
Workunit 2335667
Created 2 Oct 2023, 2:19:08 UTC
Sent 2 Oct 2023, 2:24:13 UTC
Report deadline 9 Oct 2023, 2:24:13 UTC
Received 2 Oct 2023, 3:36:36 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4933
Run time 33 min 49 sec
CPU time 16 min 18 sec
Validate state Valid
Credit 21.02
Device peak FLOPS 4.47 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.57 GB
Peak swap size 2.12 GB
Peak disk usage 82.85 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:02:28 (1024198): wrapper (7.7.26015): starting
21:02:28 (1024198): wrapper: running run_atlas (--nthreads 1)
[2023-10-01 21:02:28] Arguments: --nthreads 1
[2023-10-01 21:02:28] Threads: 1
[2023-10-01 21:02:28] Checking for CVMFS
[2023-10-01 21:02:30] Probing /cvmfs/atlas.cern.ch... OK
[2023-10-01 21:02:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-10-01 21:02:31] Running cvmfs_config stat atlas.cern.ch
[2023-10-01 21:02:31] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-10-01 21:02:31] 2.11.0.0 1024409 0 23340 124252 3 1 1297088 4096001 0 130560 0 0 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-10-01 21:02:31] CVMFS is ok
[2023-10-01 21:02:31] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-10-01 21:02:31] Small home clusters do not require a local http proxy but it is suggested if
[2023-10-01 21:02:31] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-10-01 21:02:31] Further information can be found at the LHC@home message board.
[2023-10-01 21:02:31] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-10-01 21:02:31] Checking for apptainer binary...
[2023-10-01 21:02:31] apptainer is not installed, using version from CVMFS
[2023-10-01 21:02:31] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-10-01 21:02:31] T5810-2
[2023-10-01 21:02:31] apptainer works
[2023-10-01 21:02:32] Starting ATLAS job with PandaID=5977964023
[2023-10-01 21:02:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-10-01 21:36:14]  *** The last 200 lines of the pilot log: ***
[2023-10-01 21:36:14] 2023-10-02 03:35:52,932 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 79 s
[2023-10-01 21:36:14] 2023-10-02 03:35:52,932 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 1359 s
[2023-10-01 21:36:14] 2023-10-02 03:35:52,932 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 358 s
[2023-10-01 21:36:14] 2023-10-02 03:35:52,932 | INFO     | pilot.util.timing                | timing_report             | . log creation = 0 s
[2023-10-01 21:36:14] 2023-10-02 03:35:52,932 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-10-01 21:36:14] 2023-10-02 03:35:52,932 | DEBUG    | pilot.control.job                | add_timing_and_extracts   | could have reported time_log_creation=0 s
[2023-10-01 21:36:14] 2023-10-02 03:35:52,932 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5977964023', 'state': 'finished', 'timestamp': '2023-10-01T21:35:40-07:00', 'siteNam
[2023-10-01 21:36:14] 2023-10-02 03:35:52,933 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5977964023', 'state': 'finished', 'timestamp': '2023-10-01T21:35:40
[2023-10-01 21:36:14] 2023-10-02 03:35:52,933 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc-client/slots/1/heartbeat.json
[2023-10-01 21:36:14] 2023-10-02 03:35:52,934 | DEBUG    | pilot.control.job                | queue_monitor             | job.completed=False
[2023-10-01 21:36:14] 2023-10-02 03:35:53,334 | INFO     | pilot.control.job                | make_job_report           | 
[2023-10-01 21:36:14] 2023-10-02 03:35:53,334 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-10-01 21:36:14] 2023-10-02 03:35:53,334 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-10-01 21:36:14] 2023-10-02 03:35:53,334 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5977964023
[2023-10-01 21:36:14] 2023-10-02 03:35:53,334 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-10-01 21:36:14] 2023-10-02 03:35:53,334 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 978 s
[2023-10-01 21:36:14] 2023-10-02 03:35:53,335 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | pid: 1036154
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | pgrp: 1036154
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2458844, 1: 2459043, 12: 2459189, 22: 2459217, 33: 2459245, 44: 2459273, 54: 2459429, 65:
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.control.job                | make_job_report           | 
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/1:
[2023-10-01 21:36:14] 
[2023-10-01 21:36:14] 2023-10-02 03:35:53,336 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc-client/slots/1
[2023-10-01 21:36:14] 2023-10-02 03:35:53,349 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-01 21:36:14] 2023-10-02 03:35:53,368 | DEBUG    | pilot.control.job                | has_job_completed         | total 43908
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  1008530 Oct  1 21:04 agis_schedconf.cvmfs.json
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc        0 Oct  1 21:02 boinc_lockfile
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     8192 Oct  1 21:35 boinc_mmap_file
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      533 Oct  1 21:29 boinc_task_state.xml
[2023-10-01 21:36:14] -rw------- 1 boinc boinc   616848 Oct  1 21:35 ccb1f0a0-ad74-4482-a7aa-5fdba078a791_18829.1.job.log
[2023-10-01 21:36:14] -rw------- 1 boinc boinc   183300 Oct  1 21:33 ccb1f0a0-ad74-4482-a7aa-5fdba078a791_18829.1.job.log.tgz
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  1369984 Oct  1 21:04 cric_ddmendpoints.json
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc 38288972 Oct  1 21:02 EVNT.04972714._000032.pool.root.1
[2023-10-01 21:36:14] -rw------- 1 boinc boinc     6623 Oct  1 21:35 heartbeat.json
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     9025 Oct  1 21:02 init_data.xml
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc   446728 Oct  1 21:02 input.tar.gz
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      112 Oct  1 21:02 job.xml
[2023-10-01 21:36:14] -rw------- 1 boinc boinc     1023 Oct  1 21:29 memory_monitor_summary.json
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  1820547 Oct  1 21:29 output.1.ccb1f0a0-ad74-4482-a7aa-5fdba078a791_18829.pool.root
[2023-10-01 21:36:14] -rw------- 1 boinc boinc      464 Oct  1 21:35 output.list
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     2666 Oct  1 21:02 pandaJob.out
[2023-10-01 21:36:14] drwxrwx--- 2 boinc boinc     4096 Oct  1 21:35 PanDA_Pilot-5977964023/
[2023-10-01 21:36:14] drwx------ 4 boinc boinc     4096 Oct  1 21:04 pilot3/
[2023-10-01 21:36:14] -rw------- 1 boinc boinc   435700 Oct  1 20:19 pilot3.tar.gz
[2023-10-01 21:36:14] -rw------- 1 boinc boinc   604280 Oct  1 21:35 pilotlog.txt
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     4388 Oct  1 20:19 queuedata.json
[2023-10-01 21:36:14] -rwxr-xr-x 1 boinc boinc     7986 Oct  1 21:02 run_atlas*
[2023-10-01 21:36:14] -rwx------ 1 boinc boinc    27437 Oct  1 20:19 runpilot2-wrapper.sh*
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      407 Oct  1 21:02 runtime_log
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     7829 Oct  1 21:02 runtime_log.err
[2023-10-01 21:36:14] -rw------- 1 boinc boinc      424 Oct  1 21:02 setup.sh.local
[2023-10-01 21:36:14] drwxrwx--x 2 boinc boinc     4096 Oct  1 21:02 shared/
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc    17632 Oct  1 21:02 start_atlas.sh
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     2038 Oct  1 21:02 stderr.txt
[2023-10-01 21:36:14] -rw------- 1 boinc boinc      130 Oct  1 21:02 VETMDmfhN73n7Olcko1bjSoqABFKDmABFKDm7AsVDm09RKDmx1G8Lo.diag
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      107 Oct  1 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc       25 Oct  1 21:35 wrapper_checkpoint.txt
[2023-10-01 21:36:14] 2023-10-02 03:35:53,369 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,369 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,369 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,369 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,369 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,369 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,369 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,370 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,371 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,371 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-10-01 21:36:14] 2023-10-02 03:35:53,371 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,371 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-10-01 21:36:14] 2023-10-02 03:35:53,371 | INFO     | pilot.control.job                | has_job_completed         | job 5977964023 has completed (purged errors)
[2023-10-01 21:36:14] 2023-10-02 03:35:53,371 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-10-01 21:36:14] 2023-10-02 03:35:53,371 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-10-01 21:36:14] 2023-10-02 03:35:53,377 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/1/PanDA_Pilot-5977964023
[2023-10-01 21:36:14] 2023-10-02 03:35:54,382 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [1036154]
[2023-10-01 21:36:14] 2023-10-02 03:35:54,382 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector waiting for pid 1036154
[2023-10-01 21:36:14] 2023-10-02 03:35:54,382 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-10-01 21:36:14] 2023-10-02 03:35:55,386 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-10-01 21:36:14] 2023-10-02 03:35:55,388 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=1036154
[2023-10-01 21:36:14] 2023-10-02 03:35:55,397 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-01 21:36:14] 2023-10-02 03:35:55,473 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [1036154] (in reverse order)
[2023-10-01 21:36:14] 2023-10-02 03:35:55,482 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-01 21:36:14] 2023-10-02 03:35:55,524 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-10-01 21:36:14] 2023-10-02 03:35:55,524 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-10-01 21:36:14] 2023-10-02 03:35:55,529 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 1036154
[2023-10-01 21:36:14] 2023-10-02 03:35:55,533 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 1036154
[2023-10-01 21:36:14] 2023-10-02 03:35:55,534 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-10-01 21:36:14] 2023-10-02 03:35:55,534 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-10-01 21:36:14] 2023-10-02 03:35:55,534 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-10-01 21:36:14] 2023-10-02 03:35:55,535 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2023-10-01 21:36:14] 2023-10-02 03:35:55,535 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.6.9.2  ***
[2023-10-01 21:36:14] 2023-10-02 03:35:55,535 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2023-10-01 21:36:14] 2023-10-02 03:35:55,535 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-10-01 21:36:14] 2023-10-02 03:35:55,555 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-10-01 21:36:14] 2023-10-02 03:35:55,555 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2023-10-01 21:36:14] 2023-10-02 03:35:55,564 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-01 21:36:14] 2023-10-02 03:35:55,568 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2023-10-01 21:36:14] NAME="CentOS Linux"
[2023-10-01 21:36:14] VERSION="7 (Core)"
[2023-10-01 21:36:14] ID="centos"
[2023-10-01 21:36:14] ID_LIKE="rhel fedora"
[2023-10-01 21:36:14] VERSION_ID="7"
[2023-10-01 21:36:14] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-10-01 21:36:14] ANSI_COLOR="0;31"
[2023-10-01 21:36:14] CPE_NAME="cpe:/o:centos:centos:7"
[2023-10-01 21:36:14] HOME_URL="https://www.centos.org/"
[2023-10-01 21:36:14] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-10-01 21:36:14] 
[2023-10-01 21:36:14] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-10-01 21:36:14] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-10-01 21:36:14] REDHAT_SUPPORT_PRODUCT="centos"
[2023-10-01 21:36:14] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-10-01 21:36:14] 
[2023-10-01 21:36:14] 2023-10-02 03:35:55,569 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | *************************************
[2023-10-01 21:36:14] 2023-10-02 03:35:56,070 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/1
[2023-10-01 21:36:14] 2023-10-02 03:35:56,070 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc-client/slots/1
[2023-10-01 21:36:14] 2023-10-02 03:35:56,078 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-01 21:36:14] 2023-10-02 03:35:56,084 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks  Used Available Capacity Mounted on
[2023-10-01 21:36:14] /dev/sda2              479119 17909    436802       4% /var/lib/boinc-client/slots/1
[2023-10-01 21:36:14] 2023-10-02 03:35:56,084 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-10-01 21:36:14] 2023-10-02 03:35:56,085 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (458020093952 B)
[2023-10-01 21:36:14] 2023-10-02 03:35:56,085 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-10-01 21:36:14] 2023-10-02 03:35:56,085 | WARNING  | pilot.control.job                | retrieve                  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-10-01 21:36:14] 2023-10-02 03:35:56,085 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-10-01 21:36:14] 2023-10-02 03:35:56,086 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-10-01 21:36:14] 2023-10-02 03:35:56,210 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-10-01 21:36:14] 2023-10-02 03:35:56,290 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2023-10-01 21:36:14] 2023-10-02 03:35:56,290 | INFO     | pilot.control.job                | job_monitor               | aborting loop
[2023-10-01 21:36:14] 2023-10-02 03:35:56,358 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-10-01 21:36:14] 2023-10-02 03:35:56,610 | INFO     | pilot.util.queuehandling         | abort_jobs_in_queues      | found 0 job(s) in 20 queues
[2023-10-01 21:36:14] 2023-10-02 03:35:56,610 | WARNING  | pilot.control.monitor            | run_checks                | pilot monitor received instruction that args.graceful_stop has been set
[2023-10-01 21:36:14] 2023-10-02 03:35:56,610 | WARNING  | pilot.control.monitor            | run_checks                | will wait for a maximum of 300 s for threads to finish
[2023-10-01 21:36:14] 2023-10-02 03:35:57,090 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:57,215 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:57,294 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:57,362 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-10-01 21:36:14] 2023-10-02 03:35:57,362 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:57,362 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:57,458 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:57,758 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:57,950 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:58,039 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-10-01 21:36:14] 2023-10-02 03:35:58,090 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:58,118 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:58,134 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:58,350 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:58,366 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:35:59,042 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:36:00,090 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:36:06,532 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-10-01 21:36:14] 2023-10-02 03:36:06,532 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-10-01 21:36:14] 2023-10-02 03:36:06,532 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-10-01 21:36:14] 2023-10-02 03:36:07,537 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-10-01 21:36:14] 2023-10-02 03:36:09,006 | INFO     | pilot.util.processes             | threads_aborted           | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139750
[2023-10-01 21:36:14] 2023-10-02 03:36:09,006 | DEBUG    | pilot.workflow.generic           | run                       | will proceed to set job_aborted
[2023-10-01 21:36:14] 2023-10-02 03:36:09,662 | WARNING  | pilot.control.monitor            | run_checks                | job_aborted has been set - aborting pilot monitoring
[2023-10-01 21:36:14] 2023-10-02 03:36:09,662 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-10-01 21:36:14] 2023-10-02 03:36:14,030 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-10-01 21:36:14] 2023-10-02 03:36:14,030 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-10-01 21:36:14] 2023-10-02 03:36:14,030 | DEBUG    | root                             | <module>                  | trace=<class 'pilot.workflow.generic.traces'>
[2023-10-01 21:36:14] 2023-10-02 03:36:14,085 | DEBUG    | pilot.util.processgroups         | get_all_child_pids        | python3(1028495)---pstree(1049706)
[2023-10-01 21:36:14] 
[2023-10-01 21:36:14] 2023-10-02 03:36:14,086 | INFO     | pilot.util.processgroups         | find_defunct_subprocesses | child pids=[1028495, 1049706]
[2023-10-01 21:36:14] 2023-10-02 03:36:14,118 | DEBUG    | pilot.util.processgroups         | is_defunct                | 1028495: return code=0, stdout=SN
[2023-10-01 21:36:14] , stderr=
[2023-10-01 21:36:14] 2023-10-02 03:36:14,153 | DEBUG    | pilot.util.processgroups         | is_defunct                | 1049706: return code=1, stdout=, stderr=
[2023-10-01 21:36:14] 2023-10-02 03:36:14,154 | INFO     | root                             | list_zombies              | no defunct processes were found
[2023-10-01 21:36:14] 2023-10-02 03:36:14,154 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-10-01 21:36:14] 2023-10-02 03:36:14,154 | INFO     | root                             | wrap_up                   | pilot has finished (exit code=0, shell exit code=0)
[2023-10-01 21:36:14] 2023-10-02 03:36:14,257 [wrapper] ==== pilot stdout END ====
[2023-10-01 21:36:14] 2023-10-02 03:36:14,260 [wrapper] ==== wrapper stdout RESUME ====
[2023-10-01 21:36:14] 2023-10-02 03:36:14,262 [wrapper] pilotpid: 1028495
[2023-10-01 21:36:14] 2023-10-02 03:36:14,264 [wrapper] Pilot exit status: 0
[2023-10-01 21:36:14] 2023-10-02 03:36:14,290 [wrapper] pandaids: 5977964023
[2023-10-01 21:36:14] 2023-10-02 03:36:14,295 [wrapper] apfmon messages muted
[2023-10-01 21:36:14] 2023-10-02 03:36:14,297 [wrapper] Test setup, not cleaning
[2023-10-01 21:36:14] 2023-10-02 03:36:14,299 [wrapper] ==== wrapper stdout END ====
[2023-10-01 21:36:14] 2023-10-02 03:36:14,301 [wrapper] ==== wrapper stderr END ====
[2023-10-01 21:36:14] 2023-10-02 03:36:14,354 [wrapper] wrapperexiting ec=0, duration=2022
[2023-10-01 21:36:14] 2023-10-02 03:36:14,363 [wrapper] apfmon messages muted
[2023-10-01 21:36:14]  *** Error codes and diagnostics ***
[2023-10-01 21:36:14]     "exeErrorCode": 0,
[2023-10-01 21:36:14]     "exeErrorDiag": "",
[2023-10-01 21:36:14]     "pilotErrorCode": 0,
[2023-10-01 21:36:14]     "pilotErrorDiag": "",
[2023-10-01 21:36:14]  *** Listing of results directory ***
[2023-10-01 21:36:14] total 45960
[2023-10-01 21:36:14] -rwx------ 1 boinc boinc    27437 Oct  1 20:19 runpilot2-wrapper.sh
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     4388 Oct  1 20:19 queuedata.json
[2023-10-01 21:36:14] -rw------- 1 boinc boinc   435700 Oct  1 20:19 pilot3.tar.gz
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      107 Oct  1 21:02 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-01 21:36:14] -rwxr-xr-x 1 boinc boinc     7986 Oct  1 21:02 run_atlas
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      112 Oct  1 21:02 job.xml
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc 38288972 Oct  1 21:02 EVNT.04972714._000032.pool.root.1
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc    17632 Oct  1 21:02 start_atlas.sh
[2023-10-01 21:36:14] drwxrwx--x 2 boinc boinc     4096 Oct  1 21:02 shared
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc   446728 Oct  1 21:02 input.tar.gz
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     9025 Oct  1 21:02 init_data.xml
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc        0 Oct  1 21:02 boinc_lockfile
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     2666 Oct  1 21:02 pandaJob.out
[2023-10-01 21:36:14] -rw------- 1 boinc boinc      424 Oct  1 21:02 setup.sh.local
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  1369984 Oct  1 21:04 cric_ddmendpoints.json
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  1008530 Oct  1 21:04 agis_schedconf.cvmfs.json
[2023-10-01 21:36:14] drwx------ 4 boinc boinc     4096 Oct  1 21:04 pilot3
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  1820547 Oct  1 21:29 output.1.ccb1f0a0-ad74-4482-a7aa-5fdba078a791_18829.pool.root
[2023-10-01 21:36:14] -rw------- 1 boinc boinc     1023 Oct  1 21:29 memory_monitor_summary.json
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      533 Oct  1 21:29 boinc_task_state.xml
[2023-10-01 21:36:14] -rw------- 1 boinc boinc   183300 Oct  1 21:33 ccb1f0a0-ad74-4482-a7aa-5fdba078a791_18829.1.job.log.tgz
[2023-10-01 21:36:14] -rw------- 1 boinc boinc     6623 Oct  1 21:35 heartbeat.json
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc     8192 Oct  1 21:36 boinc_mmap_file
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc       25 Oct  1 21:36 wrapper_checkpoint.txt
[2023-10-01 21:36:14] -rw------- 1 boinc boinc     9366 Oct  1 21:36 pilotlog.txt
[2023-10-01 21:36:14] -rw------- 1 boinc boinc   634830 Oct  1 21:36 ccb1f0a0-ad74-4482-a7aa-5fdba078a791_18829.1.job.log
[2023-10-01 21:36:14] -rw------- 1 boinc boinc      464 Oct  1 21:36 output.list
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc      748 Oct  1 21:36 runtime_log
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  2652160 Oct  1 21:36 result.tar.gz
[2023-10-01 21:36:14] -rw------- 1 boinc boinc      633 Oct  1 21:36 VETMDmfhN73n7Olcko1bjSoqABFKDmABFKDm7AsVDm09RKDmx1G8Lo.diag
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc    11959 Oct  1 21:36 runtime_log.err
[2023-10-01 21:36:14] -rw-r--r-- 1 boinc boinc    29442 Oct  1 21:36 stderr.txt
[2023-10-01 21:36:14] HITS file was successfully produced:
[2023-10-01 21:36:14] -rw------- 1 boinc boinc 1820547 Oct  1 21:29 shared/HITS.pool.root.1
[2023-10-01 21:36:14]  *** Contents of shared directory: ***
[2023-10-01 21:36:14] total 42224
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc 38288972 Oct  1 21:02 ATLAS.root_0
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc    17632 Oct  1 21:02 start_atlas.sh
[2023-10-01 21:36:14] -rw-r--r-- 2 boinc boinc   446728 Oct  1 21:02 input.tar.gz
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  1820547 Oct  1 21:29 HITS.pool.root.1
[2023-10-01 21:36:14] -rw------- 1 boinc boinc  2652160 Oct  1 21:36 result.tar.gz
21:36:15 (1024198): run_atlas exited; CPU time 978.648915
21:36:15 (1024198): called boinc_finish(0)

</stderr_txt>
]]>


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