Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
2023-10-11 05:42:42 (10104): Detected: vboxwrapper 26206
2023-10-11 05:42:42 (10104): Detected: BOINC client v7.24.1
2023-10-11 05:42:43 (10104): Detected: VirtualBox VboxManage Interface (Version: 7.0.8)
2023-10-11 05:42:43 (10104): Successfully copied 'init_data.xml' to the shared directory.
2023-10-11 05:42:43 (10104): Create VM. (boinc_efe9d816972d398a, slot#12)
2023-10-11 05:42:44 (10104): Setting Memory Size for VM. (4100MB)
2023-10-11 05:42:44 (10104): Setting CPU Count for VM. (1)
2023-10-11 05:42:44 (10104): Setting Chipset Options for VM.
2023-10-11 05:42:45 (10104): Setting Graphics Controller Options for VM.
2023-10-11 05:42:45 (10104): Setting Boot Options for VM.
2023-10-11 05:42:45 (10104): Setting Network Configuration for NAT.
2023-10-11 05:42:45 (10104): Enabling VM Network Access.
2023-10-11 05:42:46 (10104): Disabling USB Support for VM.
2023-10-11 05:42:46 (10104): Disabling COM Port Support for VM.
2023-10-11 05:42:46 (10104): Disabling LPT Port Support for VM.
2023-10-11 05:42:46 (10104): Disabling Audio Support for VM.
2023-10-11 05:42:47 (10104): Disabling Clipboard Support for VM.
2023-10-11 05:42:47 (10104): Disabling Drag and Drop Support for VM.
2023-10-11 05:42:47 (10104): Adding storage controller(s) to VM.
2023-10-11 05:42:47 (10104): Adding virtual disk drive to VM. (ATLAS_vbox_3.01_image.vdi)
2023-10-11 05:42:48 (10104): Adding VirtualBox Guest Additions to VM.
2023-10-11 05:42:48 (10104): Adding network bandwidth throttle group to VM. (Defaulting to 1024GB)
2023-10-11 05:42:49 (10104): forwarding host port 3414 to guest port 80
2023-10-11 05:42:49 (10104): Enabling remote desktop for VM.
2023-10-11 05:42:49 (10104): Enabling shared directory for VM.
2023-10-11 05:42:50 (10104): Starting VM using VBoxManage interface. (boinc_efe9d816972d398a, slot#12)
2023-10-11 05:43:01 (10104): Successfully started VM. (PID = '7176')
2023-10-11 05:43:01 (10104): Reporting VM Process ID to BOINC.
2023-10-11 05:43:01 (10104): Guest Log: BIOS: VirtualBox 7.0.8
2023-10-11 05:43:01 (10104): Guest Log: CPUID EDX: 0x178bfbff
2023-10-11 05:43:01 (10104): Guest Log: BIOS: No PCI IDE controller, not probing IDE
2023-10-11 05:43:01 (10104): Guest Log: BIOS: AHCI 0-P#0: PCHS=16383/16/63 LCHS=1024/255/63 0x0000000002800000 sectors
2023-10-11 05:43:01 (10104): VM state change detected. (old = 'poweredoff', new = 'running')
2023-10-11 05:43:01 (10104): Detected: Web Application Enabled (http://localhost:3414)
2023-10-11 05:43:01 (10104): Detected: Remote Desktop Enabled (localhost:3415)
2023-10-11 05:43:01 (10104): Preference change detected
2023-10-11 05:43:01 (10104): Setting CPU throttle for VM. (90%)
2023-10-11 05:43:01 (10104): Setting checkpoint interval to 900 seconds. (Higher value of (Preference: 900 seconds) or (Vbox_job.xml: 900 seconds))
2023-10-11 05:43:03 (10104): Guest Log: BIOS: Boot : bseqnr=1, bootseq=0032
2023-10-11 05:43:03 (10104): Guest Log: BIOS: Booting from Hard Disk...
2023-10-11 05:43:40 (10104): Guest Log: BIOS: KBD: unsupported int 16h function 03
2023-10-11 05:43:40 (10104): Guest Log: BIOS: AX=0305 BX=0000 CX=0000 DX=0000 
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=81
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=81
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=82
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=82
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=83
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=83
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=84
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=84
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=85
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=85
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=86
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=86
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=87
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=87
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=88
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=88
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=89
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=89
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8a
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8a
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8b
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8b
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8c
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8c
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8d
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8d
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8e
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8e
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk_ext: function 41, unmapped device for ELDL=8f
2023-10-11 05:43:40 (10104): Guest Log: int13_harddisk: function 02, unmapped device for ELDL=8f
2023-10-11 05:43:47 (10104): Guest Log: vgdrvHeartbeatInit: Setting up heartbeat to trigger every 2000 milliseconds
2023-10-11 05:43:47 (10104): Guest Log: vboxguest: misc device minor 58, IRQ 20, I/O port d020, MMIO at 00000000f0400000 (size 0x400000)
2023-10-11 05:44:02 (10104): Guest Log: VBoxService 5.2.32 r132073 (verbosity: 0) linux.amd64 (Jul 12 2019 10:32:28) release log
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.000238 main     Log opened 2023-10-11T05:44:00.461216000Z
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.000527 main     OS Product: Linux
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.000609 main     OS Release: 3.10.0-957.27.2.el7.x86_64
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.000670 main     OS Version: #1 SMP Mon Jul 29 17:46:05 UTC 2019
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.000745 main     Executable: /opt/VBoxGuestAdditions-5.2.32/sbin/VBoxService
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.000747 main     Process ID: 1219
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.000748 main     Package type: LINUX_64BITS_GENERIC
2023-10-11 05:44:02 (10104): Guest Log: 00:00:00.002821 main     5.2.32 r132073 started. Verbose level = 0
2023-10-11 05:44:02 (10104): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch...
2023-10-11 05:44:02 (10104): Guest Log: [INFO] Mounting shared directory
2023-10-11 05:44:02 (10104): Guest Log: [INFO] Checking for init_data.xml
2023-10-11 05:44:12 (10104): Guest Log: 00:00:10.032213 timesync vgsvcTimeSyncWorker: Radical guest time change: 25 211 055 691 000ns (GuestNow=1 697 028 251 548 415 000 ns GuestLast=1 697 003 040 492 724 000 ns fSetTimeLastLoop=true )
2023-10-11 05:46:35 (10104): Guest Log: [INFO] Probing /cvmfs/atlas.cern.ch... OK
2023-10-11 05:46:35 (10104): Guest Log: [INFO] Detected branch: dev
2023-10-11 05:46:36 (10104): Guest Log: This is the dev version of the ATLAS job wrapper
2023-10-11 05:46:36 (10104): Guest Log: Copying input files
2023-10-11 05:46:36 (10104): Guest Log: Copied input files into RunAtlas.
2023-10-11 05:46:36 (10104): Guest Log: This VM did not configure a local http proxy via BOINC.
2023-10-11 05:46:36 (10104): Guest Log: Small home clusters do not require a local http proxy but it is suggested if
2023-10-11 05:46:36 (10104): Guest Log: more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
2023-10-11 05:46:36 (10104): Guest Log: Further information can be found at the LHC@home message board.
2023-10-11 05:49:10 (10104): Guest Log: Running cvmfs_config stat atlas.cern.ch
2023-10-11 05:49:14 (10104): Guest Log: VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
2023-10-11 05:49:14 (10104): Guest Log: 2.6.3.0 1547 3 30072 124622 4 1 3116788 4096000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
2023-10-11 05:49:15 (10104): Guest Log: copied the webapp to /var/www
2023-10-11 05:49:15 (10104): Guest Log: core_number=1
2023-10-11 05:49:21 (10104): Guest Log: Apptainer command /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/data,/home/atlas/RunAtlas /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 
2023-10-11 05:49:21 (10104): Guest Log:  *** Starting ATLAS job. (PandaID=5987149746 taskID=NULL&cor) ***
2023-10-11 06:14:04 (10104): Guest Log:  *** Job finished ***
2023-10-11 06:14:04 (10104): Guest Log:  *** The last 20 lines of the pilot log: ***
2023-10-11 06:14:04 (10104): Guest Log:  *** Error codes and diagnostics ***
2023-10-11 06:14:04 (10104): Guest Log:     "exeErrorCode": 0,
2023-10-11 06:14:04 (10104): Guest Log:     "exeErrorDiag": "",
2023-10-11 06:14:04 (10104): Guest Log:     "pilotErrorCode": 1305,
2023-10-11 06:14:04 (10104): Guest Log:     "pilotErrorDiag": "Failed to execute payload:PyJobTransforms.transform.execute 2023-10-11 13:04:24,287 CRITICAL Transform executor raised TransformValidationException: EVNTtoHITS got a SIGSEGV signal (exit code 139)",
2023-10-11 06:14:04 (10104): Guest Log:  *** Listing of results directory ***
2023-10-11 06:14:04 (10104): Guest Log: total 3704
2023-10-11 06:14:04 (10104): Guest Log: -rw-r--r--. 1 atlas atlas  433413 Oct 11 12:17 pilot3.tar.gz
2023-10-11 06:14:04 (10104): Guest Log: -rwx------. 1 atlas atlas   27437 Oct 11 12:20 runpilot2-wrapper.sh
2023-10-11 06:14:04 (10104): Guest Log: -rw-r--r--. 1 atlas atlas    4388 Oct 11 12:20 queuedata.json
2023-10-11 06:14:04 (10104): Guest Log: -rwxr-xr-x. 1 atlas atlas    9176 Oct 11 12:46 init_data.xml
2023-10-11 06:14:04 (10104): Guest Log: -rwxr-xr-x. 1 atlas atlas  444657 Oct 11 12:46 input.tar.gz
2023-10-11 06:14:04 (10104): Guest Log: -rwxr-xr-x. 1 atlas atlas   17624 Oct 11 12:46 start_atlas.sh
2023-10-11 06:14:04 (10104): Guest Log: lrwxrwxrwx. 1 atlas atlas      20 Oct 11 12:46 EVNT.04972714._000027.pool.root.1 -> /data/./ATLAS.root_0
2023-10-11 06:14:04 (10104): Guest Log: -rw-r--r--. 1 atlas atlas    2752 Oct 11 12:49 pandaJob.out
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas     424 Oct 11 12:49 setup.sh.local
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas 1361560 Oct 11 12:55 cric_ddmendpoints.json
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas  993458 Oct 11 12:55 agis_schedconf.cvmfs.json
2023-10-11 06:14:04 (10104): Guest Log: drwx------. 4 atlas atlas     279 Oct 11 12:56 pilot3
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas    1021 Oct 11 13:04 memory_monitor_summary.json
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas   59988 Oct 11 13:04 7b3b489e-a1e9-4891-b85a-77a17fc4b90a_60125.1.job.log.tgz
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas    7469 Oct 11 13:13 heartbeat.json
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas    4033 Oct 11 13:14 pilotlog.txt
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas  144530 Oct 11 13:14 7b3b489e-a1e9-4891-b85a-77a17fc4b90a_60125.1.job.log
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas     227 Oct 11 13:14 output.list
2023-10-11 06:14:04 (10104): Guest Log: -rw-r--r--. 1 atlas atlas     686 Oct 11 13:14 runtime_log
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas  225280 Oct 11 13:14 result.tar.gz
2023-10-11 06:14:04 (10104): Guest Log: -rw-r--r--. 1 atlas atlas   11209 Oct 11 13:14 runtime_log.err
2023-10-11 06:14:04 (10104): Guest Log: -rw-------. 1 atlas atlas     629 Oct 11 13:14 0KZKDmiNnA4n7Olcko1bjSoqABFKDmABFKDm7AsVDmGoSKDmWHLtvm.diag
2023-10-11 06:14:04 (10104): Guest Log: Looking for outputfile output.1.7b3b489e-a1e9-4891-b85a-77a17fc4b90a_60125.pool.root
2023-10-11 06:14:04 (10104): Guest Log: No HITS file was produced
2023-10-11 06:14:04 (10104): Guest Log: Successfully finished the ATLAS job!
2023-10-11 06:14:04 (10104): Guest Log: Copying the results back to the shared directory!
2023-10-11 06:14:04 (10104): Guest Log:  *** Contents of shared directory: ***
2023-10-11 06:14:04 (10104): Guest Log: total 37764
2023-10-11 06:14:04 (10104): Guest Log: -rwxrwxrwx. 1 root root 37965264 Oct 11 12:42 ATLAS.root_0
2023-10-11 06:14:04 (10104): Guest Log: -rwxrwxrwx. 1 root root     9176 Oct 11 12:42 init_data.xml
2023-10-11 06:14:04 (10104): Guest Log: -rwxrwxrwx. 1 root root   444657 Oct 11 12:42 input.tar.gz
2023-10-11 06:14:04 (10104): Guest Log: -rwxrwxrwx. 1 root root   225280 Oct 11 13:14 result.tar.gz
2023-10-11 06:14:04 (10104): Guest Log: -rwxrwxrwx. 1 root root    17624 Oct 11 12:39 start_atlas.sh
2023-10-11 06:14:04 (10104): Guest Log:  *** Success! Shutting down the machine. ***
2023-10-11 06:14:04 (10104): VM Completion File Detected.
2023-10-11 06:14:04 (10104): Powering off VM.
2023-10-11 06:14:05 (10104): Successfully stopped VM.
2023-10-11 06:14:05 (10104): Deregistering VM. (boinc_efe9d816972d398a, slot#12)
2023-10-11 06:14:05 (10104): Removing network bandwidth throttle group from VM.
2023-10-11 06:14:05 (10104): Removing VM from VirtualBox.
06:14:10 (10104): called boinc_finish(0)

</stderr_txt>
]]>

©2025 CERN