Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
01:09:45 (2386316): wrapper (7.7.26015): starting
01:09:45 (2386316): wrapper: running run_atlas (--nthreads 1)
[2023-10-14 01:09:45] Arguments: --nthreads 1
[2023-10-14 01:09:45] Threads: 1
[2023-10-14 01:09:45] Checking for CVMFS
[2023-10-14 01:09:45] Probing /cvmfs/atlas.cern.ch... OK
[2023-10-14 01:09:45] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-10-14 01:09:45] Running cvmfs_config stat atlas.cern.ch
[2023-10-14 01:09:47] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-10-14 01:09:47] 2.11.0.0 2310684 77 48412 124737 2 104 2266744 4096000 782 130560 0 204344 99.143 229482 1277 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-10-14 01:09:47] CVMFS is ok
[2023-10-14 01:09:47] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-10-14 01:09:47] Small home clusters do not require a local http proxy but it is suggested if
[2023-10-14 01:09:47] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-10-14 01:09:47] Further information can be found at the LHC@home message board.
[2023-10-14 01:09:47] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-10-14 01:09:47] Checking for apptainer binary...
[2023-10-14 01:09:47] Using apptainer found in PATH at /usr/local/bin/apptainer
[2023-10-14 01:09:47] Running /usr/local/bin/apptainer --version
[2023-10-14 01:09:47] apptainer version 1.2.3+286-g3ac6f0cb6
[2023-10-14 01:09:47] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-10-14 01:09:48] T5810
[2023-10-14 01:09:48] apptainer works
[2023-10-14 01:09:48] Starting ATLAS job with PandaID=5989671617
[2023-10-14 01:09:48] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-10-14 01:38:28]  *** The last 200 lines of the pilot log: ***
[2023-10-14 01:38:28] 2023-10-14 07:37:24,946 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-10-14 01:38:28] 2023-10-14 07:37:24,946 | INFO     | will try again after 30s..
[2023-10-14 01:38:28] 2023-10-14 07:37:26,012 | INFO     | 1640s have passed since pilot start
[2023-10-14 01:38:28] 2023-10-14 07:37:27,084 | INFO     | monitor loop #224: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:27,084 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:29,587 | INFO     | monitor loop #225: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:29,588 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:32,088 | INFO     | monitor loop #226: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:32,088 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:34,591 | INFO     | monitor loop #227: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:34,592 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:37,093 | INFO     | monitor loop #228: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:37,093 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:39,596 | INFO     | monitor loop #229: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:39,596 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:42,099 | INFO     | monitor loop #230: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:42,099 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:44,600 | INFO     | monitor loop #231: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:44,600 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:47,103 | INFO     | monitor loop #232: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:47,103 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:49,604 | INFO     | monitor loop #233: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:49,604 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:52,107 | INFO     | monitor loop #234: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:52,107 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:54,608 | INFO     | monitor loop #235: job 0:5989671617 is in state 'stageout'
[2023-10-14 01:38:28] 2023-10-14 07:37:54,608 | WARNING  | aborting job monitor tasks since payload process 2398361 is not running
[2023-10-14 01:38:28] 2023-10-14 07:37:55,044 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-10-14 01:38:28] 2023-10-14 07:37:55,462 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-10-14 01:38:28] 2023-10-14 07:37:55,463 | WARNING  | cache file=/var/lib/boinc-client/slots/6/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/6/agis
[2023-10-14 01:38:28] 2023-10-14 07:37:55,513 | INFO     | transferring file d07ee6f4-0fbf-490d-9050-119042557799_10498.1.job.log.tgz from /var/lib/boinc-client/slots/6/PanDA_Pilot-5989671617/d07ee6f4-0fbf-490d-9050-119042
[2023-10-14 01:38:28] 2023-10-14 07:37:55,513 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-5989671617/d07ee6f4-0fbf-490d-9050-119042557799_10498.1.job.log.tgz /var/lib/boinc-cli
[2023-10-14 01:38:28] 2023-10-14 07:37:55,538 | INFO     | Adding to output.list: d07ee6f4-0fbf-490d-9050-119042557799_10498.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ba/2f/d07ee6f4-0fbf-
[2023-10-14 01:38:28] 2023-10-14 07:37:55,538 | INFO     | summary of transferred files:
[2023-10-14 01:38:28] 2023-10-14 07:37:55,538 | INFO     |  -- lfn=d07ee6f4-0fbf-490d-9050-119042557799_10498.1.job.log.tgz, status_code=0, status=transferred
[2023-10-14 01:38:28] 2023-10-14 07:37:55,539 | INFO     | stage-out finished correctly
[2023-10-14 01:38:28] 2023-10-14 07:37:55,622 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-10-14 01:38:28] 2023-10-14 07:37:57,116 | INFO     | monitor loop #236: job 0:5989671617 is in state 'finished'
[2023-10-14 01:38:28] 2023-10-14 07:37:57,116 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 01:38:28] 2023-10-14 07:37:57,496 | INFO     | job 5989671617 has state=finished
[2023-10-14 01:38:28] 2023-10-14 07:37:57,496 | INFO     | preparing for final server update for job 5989671617 in state='finished'
[2023-10-14 01:38:28] 2023-10-14 07:37:57,497 | INFO     | this job has now completed (state=finished)
[2023-10-14 01:38:28] 2023-10-14 07:37:57,497 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-10-14 01:38:28] 2023-10-14 07:37:57,497 | INFO     | job 5989671617 has finished - writing final server update
[2023-10-14 01:38:28] 2023-10-14 07:37:57,497 | INFO     | total number of processed events: 2 (read)
[2023-10-14 01:38:28] 2023-10-14 07:37:57,519 | INFO     | executing command: lscpu
[2023-10-14 01:38:28] 2023-10-14 07:37:57,542 | INFO     | found 14 cores (14 cores per socket, 1 sockets)
[2023-10-14 01:38:28] 2023-10-14 07:37:57,542 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-10-14 01:38:28] 2023-10-14 07:37:57,577 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-10-14 01:38:28] 2023-10-14 07:37:59,619 | INFO     | monitor loop #237: job 0:5989671617 is in state 'finished'
[2023-10-14 01:38:28] 2023-10-14 07:37:59,620 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 01:38:28] 2023-10-14 07:38:02,120 | INFO     | monitor loop #238: job 0:5989671617 is in state 'finished'
[2023-10-14 01:38:28] 2023-10-14 07:38:02,120 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 01:38:28] 2023-10-14 07:38:04,623 | INFO     | monitor loop #239: job 0:5989671617 is in state 'finished'
[2023-10-14 01:38:28] 2023-10-14 07:38:04,623 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 01:38:28] 2023-10-14 07:38:06,664 | INFO     | CPU arch script returned: x86-64-v3
[2023-10-14 01:38:28] 2023-10-14 07:38:06,664 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-5989671617/memory_monitor_summary.json (trf name=prmon)
[2023-10-14 01:38:28] 2023-10-14 07:38:06,665 | INFO     | extracted standard info from prmon json
[2023-10-14 01:38:28] 2023-10-14 07:38:06,665 | INFO     | extracted standard memory fields from prmon json
[2023-10-14 01:38:28] 2023-10-14 07:38:06,666 | INFO     | fitting pss+swap vs Time
[2023-10-14 01:38:28] 2023-10-14 07:38:06,667 | INFO     | current memory leak: 1631.46 B/s (using 12 data points, chi2=0.08)
[2023-10-14 01:38:28] 2023-10-14 07:38:06,667 | INFO     | ..............................
[2023-10-14 01:38:28] 2023-10-14 07:38:06,667 | INFO     | . Timing measurements:
[2023-10-14 01:38:28] 2023-10-14 07:38:06,667 | INFO     | . get job = 78 s
[2023-10-14 01:38:28] 2023-10-14 07:38:06,667 | INFO     | . initial setup = 47 s
[2023-10-14 01:38:28] 2023-10-14 07:38:06,668 | INFO     | . payload setup = 13 s
[2023-10-14 01:38:28] 2023-10-14 07:38:06,668 | INFO     | . stage-in = 58 s
[2023-10-14 01:38:28] 2023-10-14 07:38:06,668 | INFO     | . payload execution = 1106 s
[2023-10-14 01:38:28] 2023-10-14 07:38:06,668 | INFO     | . stage-out = 350 s
[2023-10-14 01:38:28] 2023-10-14 07:38:06,668 | INFO     | . log creation = 0 s
[2023-10-14 01:38:28] 2023-10-14 07:38:06,668 | INFO     | ..............................
[2023-10-14 01:38:28] 2023-10-14 07:38:07,090 | INFO     | 
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | job summary report
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | --------------------------------------------------
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | PanDA job id: 5989671617
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | task id: NULL
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | errors: (none)
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | status: LOG_TRANSFER = DONE 
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | pilot state: finished 
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | transexitcode: 0
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | exeerrorcode: 0
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | exeerrordiag: 
[2023-10-14 01:38:28] 2023-10-14 07:38:07,091 | INFO     | exitcode: 0
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | exitmsg: OK
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | cpuconsumptiontime: 566 s
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | nevents: 2
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | neventsw: 0
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | pid: 2398361
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | pgrp: 2398361
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | corecount: 1
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | event service: False
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | sizes: {0: 2435916, 1: 2436115, 12: 2436261, 22: 2436289, 33: 2436317, 44: 2436345, 54: 2436501, 65: 2436617, 1124: 2458867, 1475: 2467987, 1486: 2468153}
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | --------------------------------------------------
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | 
[2023-10-14 01:38:28] 2023-10-14 07:38:07,092 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2023-10-14 01:38:28] 2023-10-14 07:38:07,115 | INFO     | queue jobs had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,115 | INFO     | queue payloads had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,115 | INFO     | queue data_in had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,115 | INFO     | queue data_out had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,115 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,115 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,115 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue completed_jobids has 1 job(s)
[2023-10-14 01:38:28] 2023-10-14 07:38:07,116 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,117 | INFO     | queue messages had 0 job(s) [purged]
[2023-10-14 01:38:28] 2023-10-14 07:38:07,117 | INFO     | job 5989671617 has completed (purged errors)
[2023-10-14 01:38:28] 2023-10-14 07:38:07,117 | INFO     | overall cleanup function is called
[2023-10-14 01:38:28] 2023-10-14 07:38:08,120 | INFO     | --- collectZombieJob: --- 10, [2398361]
[2023-10-14 01:38:28] 2023-10-14 07:38:08,120 | INFO     | zombie collector waiting for pid 2398361
[2023-10-14 01:38:28] 2023-10-14 07:38:08,120 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-10-14 01:38:28] 2023-10-14 07:38:09,124 | INFO     | collected zombie processes
[2023-10-14 01:38:28] 2023-10-14 07:38:09,124 | INFO     | will now attempt to kill all subprocesses of pid=2398361
[2023-10-14 01:38:28] 2023-10-14 07:38:09,191 | INFO     | process IDs to be killed: [2398361] (in reverse order)
[2023-10-14 01:38:28] 2023-10-14 07:38:09,232 | WARNING  | found no corresponding commands to process id(s)
[2023-10-14 01:38:28] 2023-10-14 07:38:09,232 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-10-14 01:38:28] 2023-10-14 07:38:09,235 | INFO     | did not find any defunct processes belonging to 2398361
[2023-10-14 01:38:28] 2023-10-14 07:38:09,238 | INFO     | did not find any defunct processes belonging to 2398361
[2023-10-14 01:38:28] 2023-10-14 07:38:09,239 | INFO     | ready for new job
[2023-10-14 01:38:28] 2023-10-14 07:38:09,239 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-10-14 01:38:28] 2023-10-14 07:38:09,240 | INFO     | **************************************
[2023-10-14 01:38:28] 2023-10-14 07:38:09,240 | INFO     | ***  PanDA Pilot version 3.6.9.10  ***
[2023-10-14 01:38:28] 2023-10-14 07:38:09,240 | INFO     | **************************************
[2023-10-14 01:38:28] 2023-10-14 07:38:09,240 | INFO     | 
[2023-10-14 01:38:28] 2023-10-14 07:38:09,257 | INFO     | architecture information:
[2023-10-14 01:38:28] 2023-10-14 07:38:09,264 | INFO     | executing command: cat /etc/os-release
[2023-10-14 01:38:28] 2023-10-14 07:38:09,278 | INFO     | cat /etc/os-release:
[2023-10-14 01:38:28] NAME="CentOS Linux"
[2023-10-14 01:38:28] VERSION="7 (Core)"
[2023-10-14 01:38:28] ID="centos"
[2023-10-14 01:38:28] ID_LIKE="rhel fedora"
[2023-10-14 01:38:28] VERSION_ID="7"
[2023-10-14 01:38:28] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-10-14 01:38:28] ANSI_COLOR="0;31"
[2023-10-14 01:38:28] CPE_NAME="cpe:/o:centos:centos:7"
[2023-10-14 01:38:28] HOME_URL="https://www.centos.org/"
[2023-10-14 01:38:28] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-10-14 01:38:28] 
[2023-10-14 01:38:28] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-10-14 01:38:28] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-10-14 01:38:28] REDHAT_SUPPORT_PRODUCT="centos"
[2023-10-14 01:38:28] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-10-14 01:38:28] 
[2023-10-14 01:38:28] 2023-10-14 07:38:09,279 | INFO     | **************************************
[2023-10-14 01:38:28] 2023-10-14 07:38:09,780 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2023-10-14 01:38:28] 2023-10-14 07:38:09,809 | INFO     | sufficient remaining disk space (211839614976 B)
[2023-10-14 01:38:28] 2023-10-14 07:38:09,809 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-10-14 01:38:28] 2023-10-14 07:38:09,809 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-10-14 01:38:28] 2023-10-14 07:38:09,809 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-10-14 01:38:28] 2023-10-14 07:38:09,809 | INFO     | found 0 job(s) in 20 queues
[2023-10-14 01:38:28] 2023-10-14 07:38:09,809 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-10-14 01:38:28] 2023-10-14 07:38:09,810 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-10-14 01:38:28] 2023-10-14 07:38:10,632 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-10-14 01:38:28] 2023-10-14 07:38:10,632 | INFO     | aborting loop
[2023-10-14 01:38:28] 2023-10-14 07:38:10,711 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-10-14 01:38:28] 2023-10-14 07:38:10,812 | INFO     | [job] retrieve thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:10,960 | INFO     | [data] copytool_in thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,136 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-10-14 01:38:28] 2023-10-14 07:38:11,224 | INFO     | [job] validate thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,348 | INFO     | [data] control thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,352 | INFO     | [payload] control thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,564 | INFO     | [job] create_data_payload thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,596 | INFO     | [payload] validate_pre thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,636 | INFO     | [job] job monitor thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,760 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-10-14 01:38:28] 2023-10-14 07:38:11,824 | INFO     | [payload] failed_post thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:11,920 | INFO     | [payload] execute_payloads thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:12,412 | INFO     | [payload] validate_post thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:12,428 | INFO     | [job] control thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:12,764 | INFO     | [job] queue monitor thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:13,140 | INFO     | [data] copytool_out thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:14,716 | INFO     | [data] queue_monitor thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:20,848 | INFO     | job.realtimelogging is not enabled
[2023-10-14 01:38:28] 2023-10-14 07:38:21,852 | INFO     | [payload] run_realtimelog thread has finished
[2023-10-14 01:38:28] 2023-10-14 07:38:23,696 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140546727716672)>', '<ExcThread(monitor, started 140546085480192)>']
[2023-10-14 01:38:28] 2023-10-14 07:38:23,868 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-10-14 01:38:28] 2023-10-14 07:38:23,868 | INFO     | [monitor] control thread has ended
[2023-10-14 01:38:28] 2023-10-14 07:38:28,720 | INFO     | end of generic workflow (traces error code: 0)
[2023-10-14 01:38:28] 2023-10-14 07:38:28,721 | INFO     | traces error code: 0
[2023-10-14 01:38:28] 2023-10-14 07:38:28,721 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-10-14 01:38:28] 2023-10-14 07:38:28,773 [wrapper] ==== pilot stdout END ====
[2023-10-14 01:38:28] 2023-10-14 07:38:28,775 [wrapper] ==== wrapper stdout RESUME ====
[2023-10-14 01:38:28] 2023-10-14 07:38:28,777 [wrapper] pilotpid: 2390368
[2023-10-14 01:38:28] 2023-10-14 07:38:28,778 [wrapper] Pilot exit status: 0
[2023-10-14 01:38:28] 2023-10-14 07:38:28,786 [wrapper] pandaids: 5989671617
[2023-10-14 01:38:28] 2023-10-14 07:38:28,793 [wrapper] apfmon messages muted
[2023-10-14 01:38:28] 2023-10-14 07:38:28,797 [wrapper] Test setup, not cleaning
[2023-10-14 01:38:28] 2023-10-14 07:38:28,805 [wrapper] ==== wrapper stdout END ====
[2023-10-14 01:38:28] 2023-10-14 07:38:28,807 [wrapper] ==== wrapper stderr END ====
[2023-10-14 01:38:28] 2023-10-14 07:38:28,817 [wrapper] wrapperexiting ec=0, duration=1720
[2023-10-14 01:38:28] 2023-10-14 07:38:28,819 [wrapper] apfmon messages muted
[2023-10-14 01:38:28]  *** Error codes and diagnostics ***
[2023-10-14 01:38:28]     "exeErrorCode": 0,
[2023-10-14 01:38:28]     "exeErrorDiag": "",
[2023-10-14 01:38:28]     "pilotErrorCode": 0,
[2023-10-14 01:38:28]     "pilotErrorDiag": "",
[2023-10-14 01:38:28]  *** Listing of results directory ***
[2023-10-14 01:38:28] total 43124
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc   433413 Oct 14 00:55 pilot3.tar.gz
[2023-10-14 01:38:28] -rwx------ 1 boinc boinc    27439 Oct 14 01:02 runpilot2-wrapper.sh
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc     4388 Oct 14 01:02 queuedata.json
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc      107 Oct 14 01:09 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-14 01:38:28] -rwxr-xr-x 1 boinc boinc     7986 Oct 14 01:09 run_atlas
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc      112 Oct 14 01:09 job.xml
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc     9118 Oct 14 01:09 init_data.xml
[2023-10-14 01:38:28] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 01:09 EVNT.04972714._000025.pool.root.1
[2023-10-14 01:38:28] -rw-r--r-- 2 boinc boinc    17604 Oct 14 01:09 start_atlas.sh
[2023-10-14 01:38:28] drwxrwx--x 2 boinc boinc     4096 Oct 14 01:09 shared
[2023-10-14 01:38:28] -rw-r--r-- 2 boinc boinc   444661 Oct 14 01:09 input.tar.gz
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc        0 Oct 14 01:09 boinc_lockfile
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc     2752 Oct 14 01:09 pandaJob.out
[2023-10-14 01:38:28] -rw------- 1 boinc boinc      424 Oct 14 01:09 setup.sh.local
[2023-10-14 01:38:28] -rw------- 1 boinc boinc   993144 Oct 14 01:10 agis_schedconf.cvmfs.json
[2023-10-14 01:38:28] -rw------- 1 boinc boinc  1361563 Oct 14 01:10 cric_ddmendpoints.json
[2023-10-14 01:38:28] drwx------ 4 boinc boinc     4096 Oct 14 01:12 pilot3
[2023-10-14 01:38:28] -rw------- 1 boinc boinc  1239590 Oct 14 01:31 output.1.d07ee6f4-0fbf-490d-9050-119042557799_10498.pool.root
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc      533 Oct 14 01:31 boinc_task_state.xml
[2023-10-14 01:38:28] -rw------- 1 boinc boinc     1028 Oct 14 01:32 memory_monitor_summary.json
[2023-10-14 01:38:28] -rw------- 1 boinc boinc   161014 Oct 14 01:34 d07ee6f4-0fbf-490d-9050-119042557799_10498.1.job.log.tgz
[2023-10-14 01:38:28] -rw------- 1 boinc boinc     8479 Oct 14 01:38 heartbeat.json
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc     8192 Oct 14 01:38 boinc_mmap_file
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc       25 Oct 14 01:38 wrapper_checkpoint.txt
[2023-10-14 01:38:28] -rw------- 1 boinc boinc     4104 Oct 14 01:38 pilotlog.txt
[2023-10-14 01:38:28] -rw------- 1 boinc boinc   200518 Oct 14 01:38 d07ee6f4-0fbf-490d-9050-119042557799_10498.1.job.log
[2023-10-14 01:38:28] -rw------- 1 boinc boinc      464 Oct 14 01:38 output.list
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc      748 Oct 14 01:38 runtime_log
[2023-10-14 01:38:28] -rw------- 1 boinc boinc  1617920 Oct 14 01:38 result.tar.gz
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc    11941 Oct 14 01:38 runtime_log.err
[2023-10-14 01:38:28] -rw------- 1 boinc boinc      630 Oct 14 01:38 EOkMDmLqnB4n7Olcko1bjSoqABFKDmABFKDm7AsVDm8zSKDmoV32cn.diag
[2023-10-14 01:38:28] -rw-r--r-- 1 boinc boinc    23186 Oct 14 01:38 stderr.txt
[2023-10-14 01:38:28] HITS file was successfully produced:
[2023-10-14 01:38:28] -rw------- 1 boinc boinc 1239590 Oct 14 01:31 shared/HITS.pool.root.1
[2023-10-14 01:38:28]  *** Contents of shared directory: ***
[2023-10-14 01:38:28] total 39868
[2023-10-14 01:38:28] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 01:09 ATLAS.root_0
[2023-10-14 01:38:28] -rw-r--r-- 2 boinc boinc    17604 Oct 14 01:09 start_atlas.sh
[2023-10-14 01:38:28] -rw-r--r-- 2 boinc boinc   444661 Oct 14 01:09 input.tar.gz
[2023-10-14 01:38:28] -rw------- 1 boinc boinc  1239590 Oct 14 01:31 HITS.pool.root.1
[2023-10-14 01:38:28] -rw------- 1 boinc boinc  1617920 Oct 14 01:38 result.tar.gz
01:38:30 (2386316): run_atlas exited; CPU time 568.102573
01:38:30 (2386316): called boinc_finish(0)

</stderr_txt>
]]>

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