Name | zUCNDmgmrB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmz0SKDmswVbOm_0 |
Workunit | 2338411 |
Created | 14 Oct 2023, 11:14:53 UTC |
Sent | 14 Oct 2023, 11:18:58 UTC |
Report deadline | 21 Oct 2023, 11:18:58 UTC |
Received | 14 Oct 2023, 11:54:24 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4662 |
Run time | 33 min 8 sec |
CPU time | 12 min 3 sec |
Validate state | Valid |
Credit | 23.37 |
Device peak FLOPS | 4.45 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.57 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 82.68 MB |
<core_client_version>7.16.6</core_client_version> <![CDATA[ <stderr_txt> 05:20:55 (2556240): wrapper (7.7.26015): starting 05:20:55 (2556240): wrapper: running run_atlas (--nthreads 1) [2023-10-14 05:20:55] Arguments: --nthreads 1 [2023-10-14 05:20:55] Threads: 1 [2023-10-14 05:20:55] Checking for CVMFS [2023-10-14 05:20:56] Probing /cvmfs/atlas.cern.ch... OK [2023-10-14 05:20:57] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-10-14 05:20:57] Running cvmfs_config stat atlas.cern.ch [2023-10-14 05:20:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-10-14 05:20:58] 2.11.0.0 2556378 0 24912 124745 3 1 3167516 4096000 0 130560 0 0 0.000 960 867 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1 [2023-10-14 05:20:58] CVMFS is ok [2023-10-14 05:20:58] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-10-14 05:20:58] Small home clusters do not require a local http proxy but it is suggested if [2023-10-14 05:20:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-10-14 05:20:58] Further information can be found at the LHC@home message board. [2023-10-14 05:20:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-10-14 05:20:58] Checking for apptainer binary... [2023-10-14 05:20:58] Using apptainer found in PATH at /usr/local/bin/apptainer [2023-10-14 05:20:58] Running /usr/local/bin/apptainer --version [2023-10-14 05:20:58] apptainer version 1.2.3+286-g3ac6f0cb6 [2023-10-14 05:20:58] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-10-14 05:20:59] T5810 [2023-10-14 05:20:59] apptainer works [2023-10-14 05:20:59] Starting ATLAS job with PandaID=5989806340 [2023-10-14 05:20:59] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-10-14 05:54:01] *** The last 200 lines of the pilot log: *** [2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO | pilot.util.timing | timing_report | . payload setup = 16 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO | pilot.util.timing | timing_report | . stage-in = 50 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO | pilot.util.timing | timing_report | . payload execution = 1357 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO | pilot.util.timing | timing_report | . stage-out = 336 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO | pilot.util.timing | timing_report | . log creation = 0 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO | pilot.util.timing | timing_report | .............................. [2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | DEBUG | pilot.control.job | add_timing_and_extracts | could have reported time_log_creation=0 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG | pilot.control.job | send_state | data={'jobId': '5989806340', 'state': 'finished', 'timestamp': '2023-10-14T05:53:27-07:00', 'siteNam [2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '5989806340', 'state': 'finished', 'timestamp': '2023-10-14T05:53:27 [2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc-client/slots/18/heartbeat.json [2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG | pilot.control.job | queue_monitor | job.completed=False [2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO | pilot.control.job | make_job_report | [2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO | pilot.control.job | make_job_report | job summary report [2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO | pilot.control.job | make_job_report | PanDA job id: 5989806340 [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | task id: NULL [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | errors: (none) [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | pilot state: finished [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | transexitcode: 0 [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0 [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | exeerrordiag: [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | exitcode: 0 [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | exitmsg: OK [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 721 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO | pilot.control.job | make_job_report | nevents: 2 [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | neventsw: 0 [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | pid: 2569587 [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | pgrp: 2569587 [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | corecount: 1 [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | event service: False [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | sizes: {0: 2435874, 1: 2436016, 11: 2436162, 22: 2436190, 33: 2436218, 43: 2436246, 54: 2436402, 58: [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | -------------------------------------------------- [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.control.job | make_job_report | [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/18: [2023-10-14 05:54:01] [2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/18 [2023-10-14 05:54:01] 2023-10-14 11:53:40,334 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s [2023-10-14 05:54:01] 2023-10-14 11:53:40,350 | DEBUG | pilot.control.job | has_job_completed | total 43564 [2023-10-14 05:54:01] -rw------- 1 boinc boinc 618876 Oct 14 05:53 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log [2023-10-14 05:54:01] -rw------- 1 boinc boinc 181076 Oct 14 05:50 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log.tgz [2023-10-14 05:54:01] -rw------- 1 boinc boinc 993144 Oct 14 05:22 agis_schedconf.cvmfs.json [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 0 Oct 14 05:20 boinc_lockfile [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 8192 Oct 14 05:53 boinc_mmap_file [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 533 Oct 14 05:47 boinc_task_state.xml [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1361563 Oct 14 05:22 cric_ddmendpoints.json [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 37965264 Oct 14 05:20 EVNT.04972714._000027.pool.root.1 [2023-10-14 05:54:01] -rw------- 1 boinc boinc 6715 Oct 14 05:53 heartbeat.json [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1794058 Oct 14 05:47 Hits.hc_20277759.BOINC-TEST.8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.HITS.pool.root [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 9119 Oct 14 05:20 init_data.xml [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 455049 Oct 14 05:20 input.tar.gz [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 112 Oct 14 05:20 job.xml [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1023 Oct 14 05:47 memory_monitor_summary.json [2023-10-14 05:54:01] -rw------- 1 boinc boinc 508 Oct 14 05:53 output.list [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 2707 Oct 14 05:20 pandaJob.out [2023-10-14 05:54:01] drwxrwx--- 2 boinc boinc 4096 Oct 14 05:53 PanDA_Pilot-5989806340/ [2023-10-14 05:54:01] drwx------ 4 boinc boinc 4096 Oct 14 05:23 pilot3/ [2023-10-14 05:54:01] -rw------- 1 boinc boinc 443337 Oct 14 05:14 pilot3.tar.gz [2023-10-14 05:54:01] -rw------- 1 boinc boinc 603279 Oct 14 05:53 pilotlog.txt [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 4388 Oct 14 05:12 queuedata.json [2023-10-14 05:54:01] -rwxr-xr-x 1 boinc boinc 7986 Oct 14 05:20 run_atlas* [2023-10-14 05:54:01] -rwx------ 1 boinc boinc 27437 Oct 14 05:14 runpilot2-wrapper.sh* [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 407 Oct 14 05:21 runtime_log [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 7837 Oct 14 05:21 runtime_log.err [2023-10-14 05:54:01] -rw------- 1 boinc boinc 424 Oct 14 05:21 setup.sh.local [2023-10-14 05:54:01] drwxrwx--x 2 boinc boinc 4096 Oct 14 05:20 shared/ [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 17624 Oct 14 05:20 start_atlas.sh [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 2054 Oct 14 05:20 stderr.txt [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 107 Oct 14 05:20 wrapper_26015_x86_64-pc-linux-gnu [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 25 Oct 14 05:53 wrapper_checkpoint.txt [2023-10-14 05:54:01] -rw------- 1 boinc boinc 128 Oct 14 05:21 zUCNDmgmrB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmz0SKDmswVbOm.diag [2023-10-14 05:54:01] 2023-10-14 11:53:40,350 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s) [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged] [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO | pilot.control.job | has_job_completed | job 5989806340 has completed (purged errors) [2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup [2023-10-14 05:54:01] 2023-10-14 11:53:40,353 | INFO | pilot.util.processes | cleanup | overall cleanup function is called [2023-10-14 05:54:01] 2023-10-14 11:53:40,354 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/18/PanDA_Pilot-5989806340 [2023-10-14 05:54:01] 2023-10-14 11:53:41,358 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [2569587] [2023-10-14 05:54:01] 2023-10-14 11:53:41,358 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 2569587 [2023-10-14 05:54:01] 2023-10-14 11:53:41,358 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes [2023-10-14 05:54:01] 2023-10-14 11:53:42,360 | INFO | pilot.util.processes | cleanup | collected zombie processes [2023-10-14 05:54:01] 2023-10-14 11:53:42,360 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=2569587 [2023-10-14 05:54:01] 2023-10-14 11:53:42,379 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s [2023-10-14 05:54:01] 2023-10-14 11:53:42,435 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [2569587] (in reverse order) [2023-10-14 05:54:01] 2023-10-14 11:53:42,441 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s [2023-10-14 05:54:01] 2023-10-14 11:53:42,483 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s) [2023-10-14 05:54:01] 2023-10-14 11:53:42,483 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs [2023-10-14 05:54:01] 2023-10-14 11:53:42,487 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 2569587 [2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 2569587 [2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged [2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | INFO | pilot.control.job | retrieve | ready for new job [2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging [2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.6.10.6 *** [2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO | pilot.util.auxiliary | pilot_version_banner | [2023-10-14 05:54:01] 2023-10-14 11:53:42,516 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information: [2023-10-14 05:54:01] 2023-10-14 11:53:42,517 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release [2023-10-14 05:54:01] 2023-10-14 11:53:42,534 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s [2023-10-14 05:54:01] 2023-10-14 11:53:42,554 | INFO | pilot.util.filehandling | dump | cat /etc/os-release: [2023-10-14 05:54:01] NAME="CentOS Linux" [2023-10-14 05:54:01] VERSION="7 (Core)" [2023-10-14 05:54:01] ID="centos" [2023-10-14 05:54:01] ID_LIKE="rhel fedora" [2023-10-14 05:54:01] VERSION_ID="7" [2023-10-14 05:54:01] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-10-14 05:54:01] ANSI_COLOR="0;31" [2023-10-14 05:54:01] CPE_NAME="cpe:/o:centos:centos:7" [2023-10-14 05:54:01] HOME_URL="https://www.centos.org/" [2023-10-14 05:54:01] BUG_REPORT_URL="https://bugs.centos.org/" [2023-10-14 05:54:01] [2023-10-14 05:54:01] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-10-14 05:54:01] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-10-14 05:54:01] REDHAT_SUPPORT_PRODUCT="centos" [2023-10-14 05:54:01] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-10-14 05:54:01] [2023-10-14 05:54:01] 2023-10-14 11:53:42,554 | INFO | pilot.util.auxiliary | pilot_version_banner | ************************************** [2023-10-14 05:54:01] 2023-10-14 11:53:43,056 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/18 [2023-10-14 05:54:01] 2023-10-14 11:53:43,056 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/18 [2023-10-14 05:54:01] 2023-10-14 11:53:43,078 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout=864000 s [2023-10-14 05:54:01] 2023-10-14 11:53:43,096 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on [2023-10-14 05:54:01] /dev/sda2 479119 253329 201382 56% /var/lib/boinc-client/slots/18 [2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr= [2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (211164332032 B) [2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job [2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration [2023-10-14 05:54:01] 2023-10-14 11:53:43,100 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues [2023-10-14 05:54:01] 2023-10-14 11:53:43,100 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set [2023-10-14 05:54:01] 2023-10-14 11:53:43,100 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish [2023-10-14 05:54:01] 2023-10-14 11:53:43,108 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration [2023-10-14 05:54:01] 2023-10-14 11:53:43,316 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set [2023-10-14 05:54:01] 2023-10-14 11:53:43,372 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration [2023-10-14 05:54:01] 2023-10-14 11:53:43,372 | INFO | pilot.control.job | job_monitor | aborting loop [2023-10-14 05:54:01] 2023-10-14 11:53:43,517 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set [2023-10-14 05:54:01] 2023-10-14 11:53:44,100 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,320 | INFO | pilot.control.data | control | [data] control thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,376 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,412 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set [2023-10-14 05:54:01] 2023-10-14 11:53:44,424 | INFO | pilot.control.job | validate | [job] validate thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,428 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,520 | INFO | pilot.control.job | control | [job] control thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,648 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,684 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,684 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:44,856 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:45,112 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:45,320 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration [2023-10-14 05:54:01] 2023-10-14 11:53:45,416 | INFO | pilot.control.payload | control | [payload] control thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:45,624 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:46,324 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:47,100 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:53,864 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled [2023-10-14 05:54:01] 2023-10-14 11:53:53,864 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point [2023-10-14 05:54:01] 2023-10-14 11:53:53,864 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting .. [2023-10-14 05:54:01] 2023-10-14 11:53:54,868 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished [2023-10-14 05:54:01] 2023-10-14 11:53:55,624 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671 [2023-10-14 05:54:01] 2023-10-14 11:53:55,624 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted [2023-10-14 05:54:01] 2023-10-14 11:53:56,152 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring [2023-10-14 05:54:01] 2023-10-14 11:53:56,152 | INFO | pilot.control.monitor | control | [monitor] control thread has ended [2023-10-14 05:54:01] 2023-10-14 11:54:00,648 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1) [2023-10-14 05:54:01] 2023-10-14 11:54:00,648 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0) [2023-10-14 05:54:01] 2023-10-14 11:54:00,699 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(2560447)---pstree(2587069) [2023-10-14 05:54:01] [2023-10-14 05:54:01] 2023-10-14 11:54:00,700 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[2560447, 2587069] [2023-10-14 05:54:01] 2023-10-14 11:54:00,729 | DEBUG | pilot.util.processgroups | is_defunct | 2560447: return code=0, stdout=SN [2023-10-14 05:54:01] , stderr= [2023-10-14 05:54:01] 2023-10-14 11:54:00,765 | DEBUG | pilot.util.processgroups | is_defunct | 2587069: return code=1, stdout=, stderr= [2023-10-14 05:54:01] 2023-10-14 11:54:00,765 | INFO | root | list_zombies | no defunct processes were found [2023-10-14 05:54:01] 2023-10-14 11:54:00,765 | INFO | root | wrap_up | traces error code: 0 [2023-10-14 05:54:01] 2023-10-14 11:54:00,766 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0) [2023-10-14 05:54:01] 2023-10-14 11:54:00,822 [wrapper] ==== pilot stdout END ==== [2023-10-14 05:54:01] 2023-10-14 11:54:00,829 [wrapper] ==== wrapper stdout RESUME ==== [2023-10-14 05:54:01] 2023-10-14 11:54:00,831 [wrapper] pilotpid: 2560447 [2023-10-14 05:54:01] 2023-10-14 11:54:00,833 [wrapper] Pilot exit status: 0 [2023-10-14 05:54:01] 2023-10-14 11:54:00,857 [wrapper] pandaids: 5989806340 [2023-10-14 05:54:01] 2023-10-14 11:54:00,863 [wrapper] apfmon messages muted [2023-10-14 05:54:01] 2023-10-14 11:54:00,869 [wrapper] Test setup, not cleaning [2023-10-14 05:54:01] 2023-10-14 11:54:00,877 [wrapper] ==== wrapper stdout END ==== [2023-10-14 05:54:01] 2023-10-14 11:54:00,882 [wrapper] ==== wrapper stderr END ==== [2023-10-14 05:54:01] 2023-10-14 11:54:00,897 [wrapper] wrapperexiting ec=0, duration=1980 [2023-10-14 05:54:01] 2023-10-14 11:54:00,911 [wrapper] apfmon messages muted [2023-10-14 05:54:01] *** Error codes and diagnostics *** [2023-10-14 05:54:01] "exeErrorCode": 0, [2023-10-14 05:54:01] "exeErrorDiag": "", [2023-10-14 05:54:01] "pilotErrorCode": 0, [2023-10-14 05:54:01] "pilotErrorDiag": "", [2023-10-14 05:54:01] *** Listing of results directory *** [2023-10-14 05:54:01] total 43844 [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 4388 Oct 14 05:12 queuedata.json [2023-10-14 05:54:01] -rwx------ 1 boinc boinc 27437 Oct 14 05:14 runpilot2-wrapper.sh [2023-10-14 05:54:01] -rw------- 1 boinc boinc 443337 Oct 14 05:14 pilot3.tar.gz [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 107 Oct 14 05:20 wrapper_26015_x86_64-pc-linux-gnu [2023-10-14 05:54:01] -rwxr-xr-x 1 boinc boinc 7986 Oct 14 05:20 run_atlas [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 112 Oct 14 05:20 job.xml [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 9119 Oct 14 05:20 init_data.xml [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 37965264 Oct 14 05:20 EVNT.04972714._000027.pool.root.1 [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 17624 Oct 14 05:20 start_atlas.sh [2023-10-14 05:54:01] drwxrwx--x 2 boinc boinc 4096 Oct 14 05:20 shared [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 455049 Oct 14 05:20 input.tar.gz [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 0 Oct 14 05:20 boinc_lockfile [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 2707 Oct 14 05:20 pandaJob.out [2023-10-14 05:54:01] -rw------- 1 boinc boinc 424 Oct 14 05:21 setup.sh.local [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1361563 Oct 14 05:22 cric_ddmendpoints.json [2023-10-14 05:54:01] -rw------- 1 boinc boinc 993144 Oct 14 05:22 agis_schedconf.cvmfs.json [2023-10-14 05:54:01] drwx------ 4 boinc boinc 4096 Oct 14 05:23 pilot3 [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1794058 Oct 14 05:47 Hits.hc_20277759.BOINC-TEST.8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.HITS.pool.root [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1023 Oct 14 05:47 memory_monitor_summary.json [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 533 Oct 14 05:47 boinc_task_state.xml [2023-10-14 05:54:01] -rw------- 1 boinc boinc 181076 Oct 14 05:50 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log.tgz [2023-10-14 05:54:01] -rw------- 1 boinc boinc 6715 Oct 14 05:53 heartbeat.json [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 8192 Oct 14 05:53 boinc_mmap_file [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 25 Oct 14 05:53 wrapper_checkpoint.txt [2023-10-14 05:54:01] -rw------- 1 boinc boinc 9229 Oct 14 05:54 pilotlog.txt [2023-10-14 05:54:01] -rw------- 1 boinc boinc 636742 Oct 14 05:54 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log [2023-10-14 05:54:01] -rw------- 1 boinc boinc 510 Oct 14 05:54 output.list [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 680 Oct 14 05:54 runtime_log [2023-10-14 05:54:01] -rw------- 1 boinc boinc 839680 Oct 14 05:54 result.tar.gz [2023-10-14 05:54:01] -rw------- 1 boinc boinc 631 Oct 14 05:54 zUCNDmgmrB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmz0SKDmswVbOm.diag [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 11641 Oct 14 05:54 runtime_log.err [2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc 29468 Oct 14 05:54 stderr.txt [2023-10-14 05:54:01] HITS file was successfully produced: [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1794058 Oct 14 05:47 shared/HITS.pool.root.1 [2023-10-14 05:54:01] *** Contents of shared directory: *** [2023-10-14 05:54:01] total 40120 [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 37965264 Oct 14 05:20 ATLAS.root_0 [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 17624 Oct 14 05:20 start_atlas.sh [2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 455049 Oct 14 05:20 input.tar.gz [2023-10-14 05:54:01] -rw------- 1 boinc boinc 1794058 Oct 14 05:47 HITS.pool.root.1 [2023-10-14 05:54:01] -rw------- 1 boinc boinc 839680 Oct 14 05:54 result.tar.gz 05:54:02 (2556240): run_atlas exited; CPU time 723.997835 05:54:02 (2556240): called boinc_finish(0) </stderr_txt> ]]>
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