Name zUCNDmgmrB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmz0SKDmswVbOm_0
Workunit 2338411
Created 14 Oct 2023, 11:14:53 UTC
Sent 14 Oct 2023, 11:18:58 UTC
Report deadline 21 Oct 2023, 11:18:58 UTC
Received 14 Oct 2023, 11:54:24 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4662
Run time 33 min 8 sec
CPU time 12 min 3 sec
Validate state Valid
Credit 23.37
Device peak FLOPS 4.45 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.57 GB
Peak swap size 2.12 GB
Peak disk usage 82.68 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
05:20:55 (2556240): wrapper (7.7.26015): starting
05:20:55 (2556240): wrapper: running run_atlas (--nthreads 1)
[2023-10-14 05:20:55] Arguments: --nthreads 1
[2023-10-14 05:20:55] Threads: 1
[2023-10-14 05:20:55] Checking for CVMFS
[2023-10-14 05:20:56] Probing /cvmfs/atlas.cern.ch... OK
[2023-10-14 05:20:57] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-10-14 05:20:57] Running cvmfs_config stat atlas.cern.ch
[2023-10-14 05:20:58] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-10-14 05:20:58] 2.11.0.0 2556378 0 24912 124745 3 1 3167516 4096000 0 130560 0 0 0.000 960 867 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-10-14 05:20:58] CVMFS is ok
[2023-10-14 05:20:58] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-10-14 05:20:58] Small home clusters do not require a local http proxy but it is suggested if
[2023-10-14 05:20:58] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-10-14 05:20:58] Further information can be found at the LHC@home message board.
[2023-10-14 05:20:58] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-10-14 05:20:58] Checking for apptainer binary...
[2023-10-14 05:20:58] Using apptainer found in PATH at /usr/local/bin/apptainer
[2023-10-14 05:20:58] Running /usr/local/bin/apptainer --version
[2023-10-14 05:20:58] apptainer version 1.2.3+286-g3ac6f0cb6
[2023-10-14 05:20:58] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-10-14 05:20:59] T5810
[2023-10-14 05:20:59] apptainer works
[2023-10-14 05:20:59] Starting ATLAS job with PandaID=5989806340
[2023-10-14 05:20:59] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-10-14 05:54:01]  *** The last 200 lines of the pilot log: ***
[2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO     | pilot.util.timing                | timing_report             | . payload setup = 16 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO     | pilot.util.timing                | timing_report             | . stage-in = 50 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO     | pilot.util.timing                | timing_report             | . payload execution = 1357 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO     | pilot.util.timing                | timing_report             | . stage-out = 336 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO     | pilot.util.timing                | timing_report             | . log creation = 0 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | INFO     | pilot.util.timing                | timing_report             | ..............................
[2023-10-14 05:54:01] 2023-10-14 11:53:40,229 | DEBUG    | pilot.control.job                | add_timing_and_extracts   | could have reported time_log_creation=0 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG    | pilot.control.job                | send_state                | data={'jobId': '5989806340', 'state': 'finished', 'timestamp': '2023-10-14T05:53:27-07:00', 'siteNam
[2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | heartbeat dictionary: {'jobId': '5989806340', 'state': 'finished', 'timestamp': '2023-10-14T05:53:27
[2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG    | pilot.control.job                | write_heartbeat_to_file   | wrote heartbeat to file: /var/lib/boinc-client/slots/18/heartbeat.json
[2023-10-14 05:54:01] 2023-10-14 11:53:40,230 | DEBUG    | pilot.control.job                | queue_monitor             | job.completed=False
[2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO     | pilot.control.job                | make_job_report           | 
[2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO     | pilot.control.job                | make_job_report           | job summary report
[2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-10-14 05:54:01] 2023-10-14 11:53:40,315 | INFO     | pilot.control.job                | make_job_report           | PanDA job id: 5989806340
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | task id: NULL
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | errors: (none)
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | status: LOG_TRANSFER = DONE 
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | pilot state: finished 
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | transexitcode: 0
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | exeerrorcode: 0
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | exeerrordiag: 
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | exitcode: 0
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | exitmsg: OK
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | cpuconsumptiontime: 721 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,316 | INFO     | pilot.control.job                | make_job_report           | nevents: 2
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | neventsw: 0
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | pid: 2569587
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | pgrp: 2569587
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | corecount: 1
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | event service: False
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | sizes: {0: 2435874, 1: 2436016, 11: 2436162, 22: 2436190, 33: 2436218, 43: 2436246, 54: 2436402, 58:
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | --------------------------------------------------
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.control.job                | make_job_report           | 
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | DEBUG    | pilot.control.job                | has_job_completed         | ls -lF /var/lib/boinc-client/slots/18:
[2023-10-14 05:54:01] 
[2023-10-14 05:54:01] 2023-10-14 11:53:40,317 | INFO     | pilot.util.container             | print_executable          | executing command: ls -lF /var/lib/boinc-client/slots/18
[2023-10-14 05:54:01] 2023-10-14 11:53:40,334 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-14 05:54:01] 2023-10-14 11:53:40,350 | DEBUG    | pilot.control.job                | has_job_completed         | total 43564
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   618876 Oct 14 05:53 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   181076 Oct 14 05:50 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log.tgz
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   993144 Oct 14 05:22 agis_schedconf.cvmfs.json
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc        0 Oct 14 05:20 boinc_lockfile
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     8192 Oct 14 05:53 boinc_mmap_file
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      533 Oct 14 05:47 boinc_task_state.xml
[2023-10-14 05:54:01] -rw------- 1 boinc boinc  1361563 Oct 14 05:22 cric_ddmendpoints.json
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 37965264 Oct 14 05:20 EVNT.04972714._000027.pool.root.1
[2023-10-14 05:54:01] -rw------- 1 boinc boinc     6715 Oct 14 05:53 heartbeat.json
[2023-10-14 05:54:01] -rw------- 1 boinc boinc  1794058 Oct 14 05:47 Hits.hc_20277759.BOINC-TEST.8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.HITS.pool.root
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     9119 Oct 14 05:20 init_data.xml
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc   455049 Oct 14 05:20 input.tar.gz
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      112 Oct 14 05:20 job.xml
[2023-10-14 05:54:01] -rw------- 1 boinc boinc     1023 Oct 14 05:47 memory_monitor_summary.json
[2023-10-14 05:54:01] -rw------- 1 boinc boinc      508 Oct 14 05:53 output.list
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     2707 Oct 14 05:20 pandaJob.out
[2023-10-14 05:54:01] drwxrwx--- 2 boinc boinc     4096 Oct 14 05:53 PanDA_Pilot-5989806340/
[2023-10-14 05:54:01] drwx------ 4 boinc boinc     4096 Oct 14 05:23 pilot3/
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   443337 Oct 14 05:14 pilot3.tar.gz
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   603279 Oct 14 05:53 pilotlog.txt
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     4388 Oct 14 05:12 queuedata.json
[2023-10-14 05:54:01] -rwxr-xr-x 1 boinc boinc     7986 Oct 14 05:20 run_atlas*
[2023-10-14 05:54:01] -rwx------ 1 boinc boinc    27437 Oct 14 05:14 runpilot2-wrapper.sh*
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      407 Oct 14 05:21 runtime_log
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     7837 Oct 14 05:21 runtime_log.err
[2023-10-14 05:54:01] -rw------- 1 boinc boinc      424 Oct 14 05:21 setup.sh.local
[2023-10-14 05:54:01] drwxrwx--x 2 boinc boinc     4096 Oct 14 05:20 shared/
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc    17624 Oct 14 05:20 start_atlas.sh
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     2054 Oct 14 05:20 stderr.txt
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      107 Oct 14 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc       25 Oct 14 05:53 wrapper_checkpoint.txt
[2023-10-14 05:54:01] -rw------- 1 boinc boinc      128 Oct 14 05:21 zUCNDmgmrB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmz0SKDmswVbOm.diag
[2023-10-14 05:54:01] 2023-10-14 11:53:40,350 | INFO     | pilot.util.queuehandling         | queue_report              | queue jobs had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue payloads had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_in had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue data_out had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue current_data_in had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_jobs had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue validated_payloads had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue monitored_payloads had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_jobs had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_payloads had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_in had 1 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,351 | INFO     | pilot.util.queuehandling         | queue_report              | queue finished_data_out had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_jobs had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_payloads had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_in had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue failed_data_out had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobs had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue completed_jobids has 1 job(s)
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue realtimelog_payloads had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.util.queuehandling         | queue_report              | queue messages had 0 job(s) [purged]
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | INFO     | pilot.control.job                | has_job_completed         | job 5989806340 has completed (purged errors)
[2023-10-14 05:54:01] 2023-10-14 11:53:40,352 | DEBUG    | pilot.util.realtimelogger        | cleanup                   | attempting real-time logger cleanup
[2023-10-14 05:54:01] 2023-10-14 11:53:40,353 | INFO     | pilot.util.processes             | cleanup                   | overall cleanup function is called
[2023-10-14 05:54:01] 2023-10-14 11:53:40,354 | DEBUG    | pilot.util.processes             | cleanup                   | work directory was removed: /var/lib/boinc-client/slots/18/PanDA_Pilot-5989806340
[2023-10-14 05:54:01] 2023-10-14 11:53:41,358 | INFO     | pilot.info.jobdata               | collect_zombies           | --- collectZombieJob: --- 10, [2569587]
[2023-10-14 05:54:01] 2023-10-14 11:53:41,358 | INFO     | pilot.info.jobdata               | collect_zombies           | zombie collector waiting for pid 2569587
[2023-10-14 05:54:01] 2023-10-14 11:53:41,358 | INFO     | pilot.info.jobdata               | collect_zombies           | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-10-14 05:54:01] 2023-10-14 11:53:42,360 | INFO     | pilot.util.processes             | cleanup                   | collected zombie processes
[2023-10-14 05:54:01] 2023-10-14 11:53:42,360 | INFO     | pilot.util.processes             | cleanup                   | will now attempt to kill all subprocesses of pid=2569587
[2023-10-14 05:54:01] 2023-10-14 11:53:42,379 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-14 05:54:01] 2023-10-14 11:53:42,435 | INFO     | pilot.util.processes             | kill_processes            | process IDs to be killed: [2569587] (in reverse order)
[2023-10-14 05:54:01] 2023-10-14 11:53:42,441 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-14 05:54:01] 2023-10-14 11:53:42,483 | WARNING  | pilot.util.processes             | kill_processes            | found no corresponding commands to process id(s)
[2023-10-14 05:54:01] 2023-10-14 11:53:42,483 | INFO     | pilot.util.processes             | kill_orphans              | Do not look for orphan processes in BOINC jobs
[2023-10-14 05:54:01] 2023-10-14 11:53:42,487 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 2569587
[2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | INFO     | pilot.util.processes             | kill_defunct_children     | did not find any defunct processes belonging to 2569587
[2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | DEBUG    | pilot.util.queuehandling         | purge_queue               | queue purged
[2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | INFO     | pilot.control.job                | retrieve                  | ready for new job
[2023-10-14 05:54:01] 2023-10-14 11:53:42,490 | INFO     | root                             | retrieve                  | pilot has finished with previous job - re-establishing logging
[2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | ***  PanDA Pilot version 3.6.10.6  ***
[2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-10-14 05:54:01] 2023-10-14 11:53:42,491 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | 
[2023-10-14 05:54:01] 2023-10-14 11:53:42,516 | INFO     | pilot.util.auxiliary             | display_architecture_info | architecture information:
[2023-10-14 05:54:01] 2023-10-14 11:53:42,517 | INFO     | pilot.util.container             | print_executable          | executing command: cat /etc/os-release
[2023-10-14 05:54:01] 2023-10-14 11:53:42,534 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-14 05:54:01] 2023-10-14 11:53:42,554 | INFO     | pilot.util.filehandling          | dump                      | cat /etc/os-release:
[2023-10-14 05:54:01] NAME="CentOS Linux"
[2023-10-14 05:54:01] VERSION="7 (Core)"
[2023-10-14 05:54:01] ID="centos"
[2023-10-14 05:54:01] ID_LIKE="rhel fedora"
[2023-10-14 05:54:01] VERSION_ID="7"
[2023-10-14 05:54:01] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-10-14 05:54:01] ANSI_COLOR="0;31"
[2023-10-14 05:54:01] CPE_NAME="cpe:/o:centos:centos:7"
[2023-10-14 05:54:01] HOME_URL="https://www.centos.org/"
[2023-10-14 05:54:01] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-10-14 05:54:01] 
[2023-10-14 05:54:01] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-10-14 05:54:01] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-10-14 05:54:01] REDHAT_SUPPORT_PRODUCT="centos"
[2023-10-14 05:54:01] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-10-14 05:54:01] 
[2023-10-14 05:54:01] 2023-10-14 11:53:42,554 | INFO     | pilot.util.auxiliary             | pilot_version_banner      | **************************************
[2023-10-14 05:54:01] 2023-10-14 11:53:43,056 | DEBUG    | pilot.util.monitoring            | check_local_space         | checking local space on /var/lib/boinc-client/slots/18
[2023-10-14 05:54:01] 2023-10-14 11:53:43,056 | INFO     | pilot.util.container             | print_executable          | executing command: df -mP /var/lib/boinc-client/slots/18
[2023-10-14 05:54:01] 2023-10-14 11:53:43,078 | DEBUG    | pilot.util.container             | execute                   | subprocess.communicate() will use timeout=864000 s
[2023-10-14 05:54:01] 2023-10-14 11:53:43,096 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stdout=Filesystem     1048576-blocks   Used Available Capacity Mounted on
[2023-10-14 05:54:01] /dev/sda2              479119 253329    201382      56% /var/lib/boinc-client/slots/18
[2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | DEBUG    | pilot.util.workernode            | get_local_disk_space      | stderr=
[2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | INFO     | pilot.util.monitoring            | check_local_space         | sufficient remaining disk space (211164332032 B)
[2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | WARNING  | pilot.control.job                | proceed_with_getjob       | since timefloor is set to 0, pilot was only allowed to run one job
[2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | WARNING  | pilot.control.job                | retrieve                  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-10-14 05:54:01] 2023-10-14 11:53:43,097 | WARNING  | pilot.util.common                | should_abort              | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-10-14 05:54:01] 2023-10-14 11:53:43,100 | INFO     | pilot.util.queuehandling         | abort_jobs_in_queues      | found 0 job(s) in 20 queues
[2023-10-14 05:54:01] 2023-10-14 11:53:43,100 | WARNING  | pilot.control.monitor            | run_checks                | pilot monitor received instruction that args.graceful_stop has been set
[2023-10-14 05:54:01] 2023-10-14 11:53:43,100 | WARNING  | pilot.control.monitor            | run_checks                | will wait for a maximum of 300 s for threads to finish
[2023-10-14 05:54:01] 2023-10-14 11:53:43,108 | WARNING  | pilot.util.common                | should_abort              | data:copytool_out:received graceful stop - abort after this iteration
[2023-10-14 05:54:01] 2023-10-14 11:53:43,316 | DEBUG    | pilot.control.data               | control                   | data control ending since graceful_stop has been set
[2023-10-14 05:54:01] 2023-10-14 11:53:43,372 | WARNING  | pilot.util.common                | should_abort              | job:job_monitor:received graceful stop - abort after this iteration
[2023-10-14 05:54:01] 2023-10-14 11:53:43,372 | INFO     | pilot.control.job                | job_monitor               | aborting loop
[2023-10-14 05:54:01] 2023-10-14 11:53:43,517 | DEBUG    | pilot.control.job                | control                   | job control ending since graceful_stop has been set
[2023-10-14 05:54:01] 2023-10-14 11:53:44,100 | INFO     | pilot.control.job                | retrieve                  | [job] retrieve thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,320 | INFO     | pilot.control.data               | control                   | [data] control thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,376 | INFO     | pilot.control.job                | job_monitor               | [job] job monitor thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,412 | DEBUG    | pilot.control.payload            | control                   | payload control ending since graceful_stop has been set
[2023-10-14 05:54:01] 2023-10-14 11:53:44,424 | INFO     | pilot.control.job                | validate                  | [job] validate thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,428 | INFO     | pilot.control.payload            | execute_payloads          | [payload] execute_payloads thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,520 | INFO     | pilot.control.job                | control                   | [job] control thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,648 | INFO     | pilot.control.payload            | validate_post             | [payload] validate_post thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,684 | INFO     | pilot.control.job                | create_data_payload       | [job] create_data_payload thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,684 | INFO     | pilot.control.data               | copytool_in               | [data] copytool_in thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:44,856 | INFO     | pilot.control.payload            | validate_pre              | [payload] validate_pre thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:45,112 | INFO     | pilot.control.data               | copytool_out              | [data] copytool_out thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:45,320 | WARNING  | pilot.util.common                | should_abort              | job:queue_monitor:received graceful stop - abort after this iteration
[2023-10-14 05:54:01] 2023-10-14 11:53:45,416 | INFO     | pilot.control.payload            | control                   | [payload] control thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:45,624 | INFO     | pilot.control.payload            | failed_post               | [payload] failed_post thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:46,324 | INFO     | pilot.control.job                | queue_monitor             | [job] queue monitor thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:47,100 | INFO     | pilot.control.data               | queue_monitoring          | [data] queue_monitor thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:53,864 | INFO     | pilot.control.payload            | get_logging_info          | job.realtimelogging is not enabled
[2023-10-14 05:54:01] 2023-10-14 11:53:53,864 | DEBUG    | pilot.control.payload            | run_realtimelog           | real-time logging not needed at this point
[2023-10-14 05:54:01] 2023-10-14 11:53:53,864 | DEBUG    | pilot.control.payload            | run_realtimelog           | realtime logger was not found, waiting ..
[2023-10-14 05:54:01] 2023-10-14 11:53:54,868 | INFO     | pilot.control.payload            | run_realtimelog           | [payload] run_realtimelog thread has finished
[2023-10-14 05:54:01] 2023-10-14 11:53:55,624 | INFO     | pilot.util.processes             | threads_aborted           | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140671
[2023-10-14 05:54:01] 2023-10-14 11:53:55,624 | DEBUG    | pilot.workflow.generic           | run                       | will proceed to set job_aborted
[2023-10-14 05:54:01] 2023-10-14 11:53:56,152 | WARNING  | pilot.control.monitor            | run_checks                | job_aborted has been set - aborting pilot monitoring
[2023-10-14 05:54:01] 2023-10-14 11:53:56,152 | INFO     | pilot.control.monitor            | control                   | [monitor] control thread has ended
[2023-10-14 05:54:01] 2023-10-14 11:54:00,648 | DEBUG    | pilot.workflow.generic           | run                       | all relevant threads have aborted (thread count=1)
[2023-10-14 05:54:01] 2023-10-14 11:54:00,648 | INFO     | pilot.workflow.generic           | run                       | end of generic workflow (traces error code: 0)
[2023-10-14 05:54:01] 2023-10-14 11:54:00,699 | DEBUG    | pilot.util.processgroups         | get_all_child_pids        | python3(2560447)---pstree(2587069)
[2023-10-14 05:54:01] 
[2023-10-14 05:54:01] 2023-10-14 11:54:00,700 | INFO     | pilot.util.processgroups         | find_defunct_subprocesses | child pids=[2560447, 2587069]
[2023-10-14 05:54:01] 2023-10-14 11:54:00,729 | DEBUG    | pilot.util.processgroups         | is_defunct                | 2560447: return code=0, stdout=SN
[2023-10-14 05:54:01] , stderr=
[2023-10-14 05:54:01] 2023-10-14 11:54:00,765 | DEBUG    | pilot.util.processgroups         | is_defunct                | 2587069: return code=1, stdout=, stderr=
[2023-10-14 05:54:01] 2023-10-14 11:54:00,765 | INFO     | root                             | list_zombies              | no defunct processes were found
[2023-10-14 05:54:01] 2023-10-14 11:54:00,765 | INFO     | root                             | wrap_up                   | traces error code: 0
[2023-10-14 05:54:01] 2023-10-14 11:54:00,766 | INFO     | root                             | wrap_up                   | pilot has finished (exit code=0, shell exit code=0)
[2023-10-14 05:54:01] 2023-10-14 11:54:00,822 [wrapper] ==== pilot stdout END ====
[2023-10-14 05:54:01] 2023-10-14 11:54:00,829 [wrapper] ==== wrapper stdout RESUME ====
[2023-10-14 05:54:01] 2023-10-14 11:54:00,831 [wrapper] pilotpid: 2560447
[2023-10-14 05:54:01] 2023-10-14 11:54:00,833 [wrapper] Pilot exit status: 0
[2023-10-14 05:54:01] 2023-10-14 11:54:00,857 [wrapper] pandaids: 5989806340
[2023-10-14 05:54:01] 2023-10-14 11:54:00,863 [wrapper] apfmon messages muted
[2023-10-14 05:54:01] 2023-10-14 11:54:00,869 [wrapper] Test setup, not cleaning
[2023-10-14 05:54:01] 2023-10-14 11:54:00,877 [wrapper] ==== wrapper stdout END ====
[2023-10-14 05:54:01] 2023-10-14 11:54:00,882 [wrapper] ==== wrapper stderr END ====
[2023-10-14 05:54:01] 2023-10-14 11:54:00,897 [wrapper] wrapperexiting ec=0, duration=1980
[2023-10-14 05:54:01] 2023-10-14 11:54:00,911 [wrapper] apfmon messages muted
[2023-10-14 05:54:01]  *** Error codes and diagnostics ***
[2023-10-14 05:54:01]     "exeErrorCode": 0,
[2023-10-14 05:54:01]     "exeErrorDiag": "",
[2023-10-14 05:54:01]     "pilotErrorCode": 0,
[2023-10-14 05:54:01]     "pilotErrorDiag": "",
[2023-10-14 05:54:01]  *** Listing of results directory ***
[2023-10-14 05:54:01] total 43844
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     4388 Oct 14 05:12 queuedata.json
[2023-10-14 05:54:01] -rwx------ 1 boinc boinc    27437 Oct 14 05:14 runpilot2-wrapper.sh
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   443337 Oct 14 05:14 pilot3.tar.gz
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      107 Oct 14 05:20 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-14 05:54:01] -rwxr-xr-x 1 boinc boinc     7986 Oct 14 05:20 run_atlas
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      112 Oct 14 05:20 job.xml
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     9119 Oct 14 05:20 init_data.xml
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 37965264 Oct 14 05:20 EVNT.04972714._000027.pool.root.1
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc    17624 Oct 14 05:20 start_atlas.sh
[2023-10-14 05:54:01] drwxrwx--x 2 boinc boinc     4096 Oct 14 05:20 shared
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc   455049 Oct 14 05:20 input.tar.gz
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc        0 Oct 14 05:20 boinc_lockfile
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     2707 Oct 14 05:20 pandaJob.out
[2023-10-14 05:54:01] -rw------- 1 boinc boinc      424 Oct 14 05:21 setup.sh.local
[2023-10-14 05:54:01] -rw------- 1 boinc boinc  1361563 Oct 14 05:22 cric_ddmendpoints.json
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   993144 Oct 14 05:22 agis_schedconf.cvmfs.json
[2023-10-14 05:54:01] drwx------ 4 boinc boinc     4096 Oct 14 05:23 pilot3
[2023-10-14 05:54:01] -rw------- 1 boinc boinc  1794058 Oct 14 05:47 Hits.hc_20277759.BOINC-TEST.8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.HITS.pool.root
[2023-10-14 05:54:01] -rw------- 1 boinc boinc     1023 Oct 14 05:47 memory_monitor_summary.json
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      533 Oct 14 05:47 boinc_task_state.xml
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   181076 Oct 14 05:50 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log.tgz
[2023-10-14 05:54:01] -rw------- 1 boinc boinc     6715 Oct 14 05:53 heartbeat.json
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc     8192 Oct 14 05:53 boinc_mmap_file
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc       25 Oct 14 05:53 wrapper_checkpoint.txt
[2023-10-14 05:54:01] -rw------- 1 boinc boinc     9229 Oct 14 05:54 pilotlog.txt
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   636742 Oct 14 05:54 8077c9ba-2a9b-4f22-98b5-99ac8df753c2_80745.job.log
[2023-10-14 05:54:01] -rw------- 1 boinc boinc      510 Oct 14 05:54 output.list
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc      680 Oct 14 05:54 runtime_log
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   839680 Oct 14 05:54 result.tar.gz
[2023-10-14 05:54:01] -rw------- 1 boinc boinc      631 Oct 14 05:54 zUCNDmgmrB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmz0SKDmswVbOm.diag
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc    11641 Oct 14 05:54 runtime_log.err
[2023-10-14 05:54:01] -rw-r--r-- 1 boinc boinc    29468 Oct 14 05:54 stderr.txt
[2023-10-14 05:54:01] HITS file was successfully produced:
[2023-10-14 05:54:01] -rw------- 1 boinc boinc 1794058 Oct 14 05:47 shared/HITS.pool.root.1
[2023-10-14 05:54:01]  *** Contents of shared directory: ***
[2023-10-14 05:54:01] total 40120
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc 37965264 Oct 14 05:20 ATLAS.root_0
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc    17624 Oct 14 05:20 start_atlas.sh
[2023-10-14 05:54:01] -rw-r--r-- 2 boinc boinc   455049 Oct 14 05:20 input.tar.gz
[2023-10-14 05:54:01] -rw------- 1 boinc boinc  1794058 Oct 14 05:47 HITS.pool.root.1
[2023-10-14 05:54:01] -rw------- 1 boinc boinc   839680 Oct 14 05:54 result.tar.gz
05:54:02 (2556240): run_atlas exited; CPU time 723.997835
05:54:02 (2556240): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN