Name | vMaMDmDOsB4n7Olcko1bjSoqABFKDmABFKDm7AsVDm70SKDmxC8HNn_0 |
Workunit | 2338422 |
Created | 14 Oct 2023, 11:53:39 UTC |
Sent | 14 Oct 2023, 11:54:24 UTC |
Report deadline | 21 Oct 2023, 11:54:24 UTC |
Received | 14 Oct 2023, 12:29:41 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4662 |
Run time | 29 min 43 sec |
CPU time | 9 min 23 sec |
Validate state | Valid |
Credit | 20.93 |
Device peak FLOPS | 4.45 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 1.54 GB |
Peak swap size | 2.12 GB |
Peak disk usage | 80.45 MB |
<core_client_version>7.16.6</core_client_version> <![CDATA[ <stderr_txt> 05:59:13 (2588251): wrapper (7.7.26015): starting 05:59:13 (2588251): wrapper: running run_atlas (--nthreads 1) [2023-10-14 05:59:13] Arguments: --nthreads 1 [2023-10-14 05:59:13] Threads: 1 [2023-10-14 05:59:13] Checking for CVMFS [2023-10-14 05:59:13] Probing /cvmfs/atlas.cern.ch... OK [2023-10-14 05:59:14] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-10-14 05:59:14] Running cvmfs_config stat atlas.cern.ch [2023-10-14 05:59:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-10-14 05:59:14] 2.11.0.0 2556378 38 43524 124745 1 75 3348456 4096001 0 130560 0 73016 99.620 43113 1321 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1 [2023-10-14 05:59:14] CVMFS is ok [2023-10-14 05:59:14] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-10-14 05:59:14] Small home clusters do not require a local http proxy but it is suggested if [2023-10-14 05:59:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-10-14 05:59:14] Further information can be found at the LHC@home message board. [2023-10-14 05:59:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-10-14 05:59:14] Checking for apptainer binary... [2023-10-14 05:59:14] Using apptainer found in PATH at /usr/local/bin/apptainer [2023-10-14 05:59:14] Running /usr/local/bin/apptainer --version [2023-10-14 05:59:14] apptainer version 1.2.3+286-g3ac6f0cb6 [2023-10-14 05:59:14] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-10-14 05:59:15] T5810 [2023-10-14 05:59:15] apptainer works [2023-10-14 05:59:15] Starting ATLAS job with PandaID=5989861637 [2023-10-14 05:59:15] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-10-14 06:28:54] *** The last 200 lines of the pilot log: *** [2023-10-14 06:28:54] 2023-10-14 12:27:51,747 | INFO | monitor loop #232: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:27:51,747 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:27:54,248 | INFO | monitor loop #233: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:27:54,248 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:27:56,751 | INFO | monitor loop #234: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:27:56,751 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:27:59,252 | INFO | monitor loop #235: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:27:59,252 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:01,755 | INFO | monitor loop #236: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:28:01,756 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:04,256 | INFO | monitor loop #237: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:28:04,256 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:06,759 | INFO | monitor loop #238: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:28:06,759 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:09,260 | INFO | monitor loop #239: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:28:09,260 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:11,763 | INFO | monitor loop #240: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:28:11,764 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:14,264 | INFO | monitor loop #241: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:28:14,264 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:16,020 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-10-14 06:28:54] 2023-10-14 12:28:16,767 | INFO | monitor loop #242: job 0:5989861637 is in state 'stageout' [2023-10-14 06:28:54] 2023-10-14 12:28:16,768 | WARNING | aborting job monitor tasks since payload process 2599975 is not running [2023-10-14 06:28:54] 2023-10-14 12:28:17,170 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-10-14 06:28:54] 2023-10-14 12:28:17,171 | WARNING | cache file=/var/lib/boinc-client/slots/9/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/9/agis [2023-10-14 06:28:54] 2023-10-14 12:28:17,229 | INFO | transferring file 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz from /var/lib/boinc-client/slots/9/PanDA_Pilot-5989861637/32fdb7ae-6005-4ba3-9136-db2e5b [2023-10-14 06:28:54] 2023-10-14 12:28:17,229 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/9/PanDA_Pilot-5989861637/32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz /var/lib/boinc-cli [2023-10-14 06:28:54] 2023-10-14 12:28:17,278 | INFO | Adding to output.list: 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/47/15/32fdb7ae-6005- [2023-10-14 06:28:54] 2023-10-14 12:28:17,279 | INFO | summary of transferred files: [2023-10-14 06:28:54] 2023-10-14 12:28:17,279 | INFO | -- lfn=32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz, status_code=0, status=transferred [2023-10-14 06:28:54] 2023-10-14 12:28:17,279 | INFO | stage-out finished correctly [2023-10-14 06:28:54] 2023-10-14 12:28:19,268 | INFO | monitor loop #243: job 0:5989861637 is in state 'finished' [2023-10-14 06:28:54] 2023-10-14 12:28:19,268 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-14 06:28:54] 2023-10-14 12:28:19,480 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-10-14 06:28:54] 2023-10-14 12:28:20,964 | INFO | job 5989861637 has state=finished [2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO | preparing for final server update for job 5989861637 in state='finished' [2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO | this job has now completed (state=finished) [2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO | job 5989861637 has finished - writing final server update [2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO | total number of processed events: 2 (read) [2023-10-14 06:28:54] 2023-10-14 12:28:20,997 | INFO | executing command: lscpu [2023-10-14 06:28:54] 2023-10-14 12:28:21,022 | INFO | found 14 cores (14 cores per socket, 1 sockets) [2023-10-14 06:28:54] 2023-10-14 12:28:21,022 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-10-14 06:28:54] 2023-10-14 12:28:21,082 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-10-14 06:28:54] 2023-10-14 12:28:21,771 | INFO | monitor loop #244: job 0:5989861637 is in state 'finished' [2023-10-14 06:28:54] 2023-10-14 12:28:21,772 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-14 06:28:54] 2023-10-14 12:28:24,275 | INFO | monitor loop #245: job 0:5989861637 is in state 'finished' [2023-10-14 06:28:54] 2023-10-14 12:28:24,275 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-14 06:28:54] 2023-10-14 12:28:26,776 | INFO | monitor loop #246: job 0:5989861637 is in state 'finished' [2023-10-14 06:28:54] 2023-10-14 12:28:26,776 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-14 06:28:54] 2023-10-14 12:28:29,279 | INFO | monitor loop #247: job 0:5989861637 is in state 'finished' [2023-10-14 06:28:54] 2023-10-14 12:28:29,280 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-14 06:28:54] 2023-10-14 12:28:31,780 | INFO | monitor loop #248: job 0:5989861637 is in state 'finished' [2023-10-14 06:28:54] 2023-10-14 12:28:31,780 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-14 06:28:54] 2023-10-14 12:28:33,913 | INFO | CPU arch script returned: x86-64-v3 [2023-10-14 06:28:54] 2023-10-14 12:28:33,913 | INFO | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-5989861637/memory_monitor_summary.json (trf name=prmon) [2023-10-14 06:28:54] 2023-10-14 12:28:33,914 | INFO | extracted standard info from prmon json [2023-10-14 06:28:54] 2023-10-14 12:28:33,915 | INFO | extracted standard memory fields from prmon json [2023-10-14 06:28:54] 2023-10-14 12:28:33,916 | INFO | fitting pss+swap vs Time [2023-10-14 06:28:54] 2023-10-14 12:28:33,916 | INFO | current memory leak: 887.30 B/s (using 13 data points, chi2=0.02) [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | .............................. [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . Timing measurements: [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . get job = 49 s [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . initial setup = 60 s [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . payload setup = 17 s [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . stage-in = 49 s [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . payload execution = 1180 s [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . stage-out = 342 s [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | . log creation = 0 s [2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO | .............................. [2023-10-14 06:28:54] 2023-10-14 12:28:34,008 | INFO | [2023-10-14 06:28:54] 2023-10-14 12:28:34,008 | INFO | job summary report [2023-10-14 06:28:54] 2023-10-14 12:28:34,008 | INFO | -------------------------------------------------- [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | PanDA job id: 5989861637 [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | task id: NULL [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | errors: (none) [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | status: LOG_TRANSFER = DONE [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | pilot state: finished [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | transexitcode: 0 [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | exeerrorcode: 0 [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | exeerrordiag: [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | exitcode: 0 [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | exitmsg: OK [2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO | cpuconsumptiontime: 561 s [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | nevents: 2 [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | neventsw: 0 [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | pid: 2599975 [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | pgrp: 2599975 [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | corecount: 1 [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | event service: False [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | sizes: {0: 2434572, 1: 2436115, 12: 2436261, 22: 2436289, 33: 2436317, 44: 2436345, 54: 2436501, 58: 2436589, 65: 2436617, 1201: 2458923, 1544: 2467987, 1546: 2468 [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | -------------------------------------------------- [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | [2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/9 [2023-10-14 06:28:54] 2023-10-14 12:28:34,042 | INFO | queue jobs had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue payloads had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue data_in had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue data_out had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue current_data_in had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue completed_jobids has 1 job(s) [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO | queue messages had 0 job(s) [purged] [2023-10-14 06:28:54] 2023-10-14 12:28:34,045 | INFO | job 5989861637 has completed (purged errors) [2023-10-14 06:28:54] 2023-10-14 12:28:34,045 | INFO | overall cleanup function is called [2023-10-14 06:28:54] 2023-10-14 12:28:35,048 | INFO | --- collectZombieJob: --- 10, [2599975] [2023-10-14 06:28:54] 2023-10-14 12:28:35,048 | INFO | zombie collector waiting for pid 2599975 [2023-10-14 06:28:54] 2023-10-14 12:28:35,048 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-10-14 06:28:54] 2023-10-14 12:28:36,052 | INFO | collected zombie processes [2023-10-14 06:28:54] 2023-10-14 12:28:36,052 | INFO | will now attempt to kill all subprocesses of pid=2599975 [2023-10-14 06:28:54] 2023-10-14 12:28:36,132 | INFO | process IDs to be killed: [2599975] (in reverse order) [2023-10-14 06:28:54] 2023-10-14 12:28:36,209 | WARNING | found no corresponding commands to process id(s) [2023-10-14 06:28:54] 2023-10-14 12:28:36,209 | INFO | Do not look for orphan processes in BOINC jobs [2023-10-14 06:28:54] 2023-10-14 12:28:36,212 | INFO | did not find any defunct processes belonging to 2599975 [2023-10-14 06:28:54] 2023-10-14 12:28:36,216 | INFO | did not find any defunct processes belonging to 2599975 [2023-10-14 06:28:54] 2023-10-14 12:28:36,216 | INFO | ready for new job [2023-10-14 06:28:54] 2023-10-14 12:28:36,216 | INFO | pilot has finished with previous job - re-establishing logging [2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO | ************************************** [2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO | *** PanDA Pilot version 3.6.9.10 *** [2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO | ************************************** [2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO | [2023-10-14 06:28:54] 2023-10-14 12:28:36,237 | INFO | architecture information: [2023-10-14 06:28:54] 2023-10-14 12:28:36,244 | INFO | executing command: cat /etc/os-release [2023-10-14 06:28:54] 2023-10-14 12:28:36,263 | INFO | cat /etc/os-release: [2023-10-14 06:28:54] NAME="CentOS Linux" [2023-10-14 06:28:54] VERSION="7 (Core)" [2023-10-14 06:28:54] ID="centos" [2023-10-14 06:28:54] ID_LIKE="rhel fedora" [2023-10-14 06:28:54] VERSION_ID="7" [2023-10-14 06:28:54] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-10-14 06:28:54] ANSI_COLOR="0;31" [2023-10-14 06:28:54] CPE_NAME="cpe:/o:centos:centos:7" [2023-10-14 06:28:54] HOME_URL="https://www.centos.org/" [2023-10-14 06:28:54] BUG_REPORT_URL="https://bugs.centos.org/" [2023-10-14 06:28:54] [2023-10-14 06:28:54] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-10-14 06:28:54] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-10-14 06:28:54] REDHAT_SUPPORT_PRODUCT="centos" [2023-10-14 06:28:54] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-10-14 06:28:54] [2023-10-14 06:28:54] 2023-10-14 12:28:36,263 | INFO | ************************************** [2023-10-14 06:28:54] 2023-10-14 12:28:36,764 | INFO | executing command: df -mP /var/lib/boinc-client/slots/9 [2023-10-14 06:28:54] 2023-10-14 12:28:36,780 | INFO | sufficient remaining disk space (211076251648 B) [2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | INFO | found 0 job(s) in 20 queues [2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-10-14 06:28:54] 2023-10-14 12:28:36,787 | WARNING | job monitor detected an abort_job request (signal=None) [2023-10-14 06:28:54] 2023-10-14 12:28:36,787 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-10-14 06:28:54] 2023-10-14 12:28:36,787 | INFO | will abort loop [2023-10-14 06:28:54] 2023-10-14 12:28:37,784 | INFO | [job] retrieve thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:37,792 | INFO | [job] job monitor thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:37,889 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-10-14 06:28:54] 2023-10-14 12:28:38,096 | INFO | [job] validate thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:38,128 | INFO | [data] control thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:38,284 | INFO | [job] create_data_payload thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:38,476 | INFO | [payload] validate_pre thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:38,524 | INFO | [payload] control thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:38,736 | INFO | [data] copytool_in thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:38,804 | INFO | [payload] execute_payloads thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:39,016 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-10-14 06:28:54] 2023-10-14 12:28:39,072 | INFO | [payload] validate_post thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:39,104 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-10-14 06:28:54] 2023-10-14 12:28:39,276 | INFO | [payload] failed_post thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:39,352 | INFO | [job] control thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:39,892 | INFO | [data] copytool_out thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:40,020 | INFO | [job] queue monitor thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:43,108 | INFO | [data] queue_monitor thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:47,488 | INFO | job.realtimelogging is not enabled [2023-10-14 06:28:54] 2023-10-14 12:28:48,492 | INFO | [payload] run_realtimelog thread has finished [2023-10-14 06:28:54] 2023-10-14 12:28:48,888 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517458077504)>', '<ExcThread(monitor, started 140516901517056)>'] [2023-10-14 06:28:54] 2023-10-14 12:28:49,832 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-10-14 06:28:54] 2023-10-14 12:28:49,832 | INFO | [monitor] control thread has ended [2023-10-14 06:28:54] 2023-10-14 12:28:53,912 | INFO | end of generic workflow (traces error code: 0) [2023-10-14 06:28:54] 2023-10-14 12:28:53,913 | INFO | traces error code: 0 [2023-10-14 06:28:54] 2023-10-14 12:28:53,913 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-10-14 06:28:54] 2023-10-14 12:28:53,962 [wrapper] ==== pilot stdout END ==== [2023-10-14 06:28:54] 2023-10-14 12:28:53,964 [wrapper] ==== wrapper stdout RESUME ==== [2023-10-14 06:28:54] 2023-10-14 12:28:53,969 [wrapper] pilotpid: 2592049 [2023-10-14 06:28:54] 2023-10-14 12:28:53,977 [wrapper] Pilot exit status: 0 [2023-10-14 06:28:54] 2023-10-14 12:28:53,997 [wrapper] pandaids: 5989861637 [2023-10-14 06:28:54] 2023-10-14 12:28:54,003 [wrapper] apfmon messages muted [2023-10-14 06:28:54] 2023-10-14 12:28:54,005 [wrapper] Test setup, not cleaning [2023-10-14 06:28:54] 2023-10-14 12:28:54,009 [wrapper] ==== wrapper stdout END ==== [2023-10-14 06:28:54] 2023-10-14 12:28:54,013 [wrapper] ==== wrapper stderr END ==== [2023-10-14 06:28:54] 2023-10-14 12:28:54,019 [wrapper] wrapperexiting ec=0, duration=1778 [2023-10-14 06:28:54] 2023-10-14 12:28:54,025 [wrapper] apfmon messages muted [2023-10-14 06:28:54] *** Error codes and diagnostics *** [2023-10-14 06:28:54] "exeErrorCode": 0, [2023-10-14 06:28:54] "exeErrorDiag": "", [2023-10-14 06:28:54] "pilotErrorCode": 0, [2023-10-14 06:28:54] "pilotErrorDiag": "", [2023-10-14 06:28:54] *** Listing of results directory *** [2023-10-14 06:28:54] total 43144 [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 433413 Oct 14 05:47 pilot3.tar.gz [2023-10-14 06:28:54] -rwx------ 1 boinc boinc 27439 Oct 14 05:53 runpilot2-wrapper.sh [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 4388 Oct 14 05:53 queuedata.json [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 107 Oct 14 05:59 wrapper_26015_x86_64-pc-linux-gnu [2023-10-14 06:28:54] -rwxr-xr-x 1 boinc boinc 7986 Oct 14 05:59 run_atlas [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 112 Oct 14 05:59 job.xml [2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 05:59 EVNT.04972714._000025.pool.root.1 [2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 17604 Oct 14 05:59 start_atlas.sh [2023-10-14 06:28:54] drwxrwx--x 2 boinc boinc 4096 Oct 14 05:59 shared [2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 444662 Oct 14 05:59 input.tar.gz [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 9118 Oct 14 05:59 init_data.xml [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 0 Oct 14 05:59 boinc_lockfile [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 2752 Oct 14 05:59 pandaJob.out [2023-10-14 06:28:54] -rw------- 1 boinc boinc 424 Oct 14 05:59 setup.sh.local [2023-10-14 06:28:54] -rw------- 1 boinc boinc 1361563 Oct 14 06:00 cric_ddmendpoints.json [2023-10-14 06:28:54] -rw------- 1 boinc boinc 993144 Oct 14 06:00 agis_schedconf.cvmfs.json [2023-10-14 06:28:54] drwx------ 4 boinc boinc 4096 Oct 14 06:01 pilot3 [2023-10-14 06:28:54] -rw------- 1 boinc boinc 1239584 Oct 14 06:22 output.1.32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.pool.root [2023-10-14 06:28:54] -rw------- 1 boinc boinc 1022 Oct 14 06:22 memory_monitor_summary.json [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 533 Oct 14 06:22 boinc_task_state.xml [2023-10-14 06:28:54] -rw------- 1 boinc boinc 161356 Oct 14 06:25 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 25 Oct 14 06:28 wrapper_checkpoint.txt [2023-10-14 06:28:54] -rw------- 1 boinc boinc 8478 Oct 14 06:28 heartbeat.json [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 8192 Oct 14 06:28 boinc_mmap_file [2023-10-14 06:28:54] -rw------- 1 boinc boinc 4199 Oct 14 06:28 pilotlog.txt [2023-10-14 06:28:54] -rw------- 1 boinc boinc 207264 Oct 14 06:28 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log [2023-10-14 06:28:54] -rw------- 1 boinc boinc 464 Oct 14 06:28 output.list [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 748 Oct 14 06:28 runtime_log [2023-10-14 06:28:54] -rw------- 1 boinc boinc 1628160 Oct 14 06:28 result.tar.gz [2023-10-14 06:28:54] -rw------- 1 boinc boinc 630 Oct 14 06:28 vMaMDmDOsB4n7Olcko1bjSoqABFKDmABFKDm7AsVDm70SKDmxC8HNn.diag [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 11941 Oct 14 06:28 runtime_log.err [2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc 23167 Oct 14 06:28 stderr.txt [2023-10-14 06:28:54] HITS file was successfully produced: [2023-10-14 06:28:54] -rw------- 1 boinc boinc 1239584 Oct 14 06:22 shared/HITS.pool.root.1 [2023-10-14 06:28:54] *** Contents of shared directory: *** [2023-10-14 06:28:54] total 39880 [2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 05:59 ATLAS.root_0 [2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 17604 Oct 14 05:59 start_atlas.sh [2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 444662 Oct 14 05:59 input.tar.gz [2023-10-14 06:28:54] -rw------- 1 boinc boinc 1239584 Oct 14 06:22 HITS.pool.root.1 [2023-10-14 06:28:54] -rw------- 1 boinc boinc 1628160 Oct 14 06:28 result.tar.gz 06:28:55 (2588251): run_atlas exited; CPU time 563.927953 06:28:55 (2588251): called boinc_finish(0) </stderr_txt> ]]>
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