Name vMaMDmDOsB4n7Olcko1bjSoqABFKDmABFKDm7AsVDm70SKDmxC8HNn_0
Workunit 2338422
Created 14 Oct 2023, 11:53:39 UTC
Sent 14 Oct 2023, 11:54:24 UTC
Report deadline 21 Oct 2023, 11:54:24 UTC
Received 14 Oct 2023, 12:29:41 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4662
Run time 29 min 43 sec
CPU time 9 min 23 sec
Validate state Valid
Credit 20.93
Device peak FLOPS 4.45 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.54 GB
Peak swap size 2.12 GB
Peak disk usage 80.45 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
05:59:13 (2588251): wrapper (7.7.26015): starting
05:59:13 (2588251): wrapper: running run_atlas (--nthreads 1)
[2023-10-14 05:59:13] Arguments: --nthreads 1
[2023-10-14 05:59:13] Threads: 1
[2023-10-14 05:59:13] Checking for CVMFS
[2023-10-14 05:59:13] Probing /cvmfs/atlas.cern.ch... OK
[2023-10-14 05:59:14] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-10-14 05:59:14] Running cvmfs_config stat atlas.cern.ch
[2023-10-14 05:59:14] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-10-14 05:59:14] 2.11.0.0 2556378 38 43524 124745 1 75 3348456 4096001 0 130560 0 73016 99.620 43113 1321 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-10-14 05:59:14] CVMFS is ok
[2023-10-14 05:59:14] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-10-14 05:59:14] Small home clusters do not require a local http proxy but it is suggested if
[2023-10-14 05:59:14] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-10-14 05:59:14] Further information can be found at the LHC@home message board.
[2023-10-14 05:59:14] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-10-14 05:59:14] Checking for apptainer binary...
[2023-10-14 05:59:14] Using apptainer found in PATH at /usr/local/bin/apptainer
[2023-10-14 05:59:14] Running /usr/local/bin/apptainer --version
[2023-10-14 05:59:14] apptainer version 1.2.3+286-g3ac6f0cb6
[2023-10-14 05:59:14] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-10-14 05:59:15] T5810
[2023-10-14 05:59:15] apptainer works
[2023-10-14 05:59:15] Starting ATLAS job with PandaID=5989861637
[2023-10-14 05:59:15] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/9 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-10-14 06:28:54]  *** The last 200 lines of the pilot log: ***
[2023-10-14 06:28:54] 2023-10-14 12:27:51,747 | INFO     | monitor loop #232: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:27:51,747 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:27:54,248 | INFO     | monitor loop #233: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:27:54,248 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:27:56,751 | INFO     | monitor loop #234: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:27:56,751 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:27:59,252 | INFO     | monitor loop #235: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:27:59,252 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:01,755 | INFO     | monitor loop #236: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:28:01,756 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:04,256 | INFO     | monitor loop #237: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:28:04,256 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:06,759 | INFO     | monitor loop #238: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:28:06,759 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:09,260 | INFO     | monitor loop #239: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:28:09,260 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:11,763 | INFO     | monitor loop #240: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:28:11,764 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:14,264 | INFO     | monitor loop #241: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:28:14,264 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:16,020 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-10-14 06:28:54] 2023-10-14 12:28:16,767 | INFO     | monitor loop #242: job 0:5989861637 is in state 'stageout'
[2023-10-14 06:28:54] 2023-10-14 12:28:16,768 | WARNING  | aborting job monitor tasks since payload process 2599975 is not running
[2023-10-14 06:28:54] 2023-10-14 12:28:17,170 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-10-14 06:28:54] 2023-10-14 12:28:17,171 | WARNING  | cache file=/var/lib/boinc-client/slots/9/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/9/agis
[2023-10-14 06:28:54] 2023-10-14 12:28:17,229 | INFO     | transferring file 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz from /var/lib/boinc-client/slots/9/PanDA_Pilot-5989861637/32fdb7ae-6005-4ba3-9136-db2e5b
[2023-10-14 06:28:54] 2023-10-14 12:28:17,229 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/9/PanDA_Pilot-5989861637/32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz /var/lib/boinc-cli
[2023-10-14 06:28:54] 2023-10-14 12:28:17,278 | INFO     | Adding to output.list: 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/47/15/32fdb7ae-6005-
[2023-10-14 06:28:54] 2023-10-14 12:28:17,279 | INFO     | summary of transferred files:
[2023-10-14 06:28:54] 2023-10-14 12:28:17,279 | INFO     |  -- lfn=32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz, status_code=0, status=transferred
[2023-10-14 06:28:54] 2023-10-14 12:28:17,279 | INFO     | stage-out finished correctly
[2023-10-14 06:28:54] 2023-10-14 12:28:19,268 | INFO     | monitor loop #243: job 0:5989861637 is in state 'finished'
[2023-10-14 06:28:54] 2023-10-14 12:28:19,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 06:28:54] 2023-10-14 12:28:19,480 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-10-14 06:28:54] 2023-10-14 12:28:20,964 | INFO     | job 5989861637 has state=finished
[2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO     | preparing for final server update for job 5989861637 in state='finished'
[2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO     | this job has now completed (state=finished)
[2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO     | job 5989861637 has finished - writing final server update
[2023-10-14 06:28:54] 2023-10-14 12:28:20,965 | INFO     | total number of processed events: 2 (read)
[2023-10-14 06:28:54] 2023-10-14 12:28:20,997 | INFO     | executing command: lscpu
[2023-10-14 06:28:54] 2023-10-14 12:28:21,022 | INFO     | found 14 cores (14 cores per socket, 1 sockets)
[2023-10-14 06:28:54] 2023-10-14 12:28:21,022 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-10-14 06:28:54] 2023-10-14 12:28:21,082 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-10-14 06:28:54] 2023-10-14 12:28:21,771 | INFO     | monitor loop #244: job 0:5989861637 is in state 'finished'
[2023-10-14 06:28:54] 2023-10-14 12:28:21,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 06:28:54] 2023-10-14 12:28:24,275 | INFO     | monitor loop #245: job 0:5989861637 is in state 'finished'
[2023-10-14 06:28:54] 2023-10-14 12:28:24,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 06:28:54] 2023-10-14 12:28:26,776 | INFO     | monitor loop #246: job 0:5989861637 is in state 'finished'
[2023-10-14 06:28:54] 2023-10-14 12:28:26,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 06:28:54] 2023-10-14 12:28:29,279 | INFO     | monitor loop #247: job 0:5989861637 is in state 'finished'
[2023-10-14 06:28:54] 2023-10-14 12:28:29,280 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 06:28:54] 2023-10-14 12:28:31,780 | INFO     | monitor loop #248: job 0:5989861637 is in state 'finished'
[2023-10-14 06:28:54] 2023-10-14 12:28:31,780 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 06:28:54] 2023-10-14 12:28:33,913 | INFO     | CPU arch script returned: x86-64-v3
[2023-10-14 06:28:54] 2023-10-14 12:28:33,913 | INFO     | using path: /var/lib/boinc-client/slots/9/PanDA_Pilot-5989861637/memory_monitor_summary.json (trf name=prmon)
[2023-10-14 06:28:54] 2023-10-14 12:28:33,914 | INFO     | extracted standard info from prmon json
[2023-10-14 06:28:54] 2023-10-14 12:28:33,915 | INFO     | extracted standard memory fields from prmon json
[2023-10-14 06:28:54] 2023-10-14 12:28:33,916 | INFO     | fitting pss+swap vs Time
[2023-10-14 06:28:54] 2023-10-14 12:28:33,916 | INFO     | current memory leak: 887.30 B/s (using 13 data points, chi2=0.02)
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | ..............................
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . Timing measurements:
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . get job = 49 s
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . initial setup = 60 s
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . payload setup = 17 s
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . stage-in = 49 s
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . payload execution = 1180 s
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . stage-out = 342 s
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | . log creation = 0 s
[2023-10-14 06:28:54] 2023-10-14 12:28:33,917 | INFO     | ..............................
[2023-10-14 06:28:54] 2023-10-14 12:28:34,008 | INFO     | 
[2023-10-14 06:28:54] 2023-10-14 12:28:34,008 | INFO     | job summary report
[2023-10-14 06:28:54] 2023-10-14 12:28:34,008 | INFO     | --------------------------------------------------
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | PanDA job id: 5989861637
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | task id: NULL
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | errors: (none)
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | status: LOG_TRANSFER = DONE 
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | pilot state: finished 
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | transexitcode: 0
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | exeerrorcode: 0
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | exeerrordiag: 
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | exitcode: 0
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | exitmsg: OK
[2023-10-14 06:28:54] 2023-10-14 12:28:34,009 | INFO     | cpuconsumptiontime: 561 s
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | nevents: 2
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | neventsw: 0
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | pid: 2599975
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | pgrp: 2599975
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | corecount: 1
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | event service: False
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | sizes: {0: 2434572, 1: 2436115, 12: 2436261, 22: 2436289, 33: 2436317, 44: 2436345, 54: 2436501, 58: 2436589, 65: 2436617, 1201: 2458923, 1544: 2467987, 1546: 2468
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | --------------------------------------------------
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | 
[2023-10-14 06:28:54] 2023-10-14 12:28:34,010 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/9
[2023-10-14 06:28:54] 2023-10-14 12:28:34,042 | INFO     | queue jobs had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue payloads had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue data_in had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue data_out had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,043 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue completed_jobids has 1 job(s)
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,044 | INFO     | queue messages had 0 job(s) [purged]
[2023-10-14 06:28:54] 2023-10-14 12:28:34,045 | INFO     | job 5989861637 has completed (purged errors)
[2023-10-14 06:28:54] 2023-10-14 12:28:34,045 | INFO     | overall cleanup function is called
[2023-10-14 06:28:54] 2023-10-14 12:28:35,048 | INFO     | --- collectZombieJob: --- 10, [2599975]
[2023-10-14 06:28:54] 2023-10-14 12:28:35,048 | INFO     | zombie collector waiting for pid 2599975
[2023-10-14 06:28:54] 2023-10-14 12:28:35,048 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-10-14 06:28:54] 2023-10-14 12:28:36,052 | INFO     | collected zombie processes
[2023-10-14 06:28:54] 2023-10-14 12:28:36,052 | INFO     | will now attempt to kill all subprocesses of pid=2599975
[2023-10-14 06:28:54] 2023-10-14 12:28:36,132 | INFO     | process IDs to be killed: [2599975] (in reverse order)
[2023-10-14 06:28:54] 2023-10-14 12:28:36,209 | WARNING  | found no corresponding commands to process id(s)
[2023-10-14 06:28:54] 2023-10-14 12:28:36,209 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-10-14 06:28:54] 2023-10-14 12:28:36,212 | INFO     | did not find any defunct processes belonging to 2599975
[2023-10-14 06:28:54] 2023-10-14 12:28:36,216 | INFO     | did not find any defunct processes belonging to 2599975
[2023-10-14 06:28:54] 2023-10-14 12:28:36,216 | INFO     | ready for new job
[2023-10-14 06:28:54] 2023-10-14 12:28:36,216 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO     | **************************************
[2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO     | ***  PanDA Pilot version 3.6.9.10  ***
[2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO     | **************************************
[2023-10-14 06:28:54] 2023-10-14 12:28:36,217 | INFO     | 
[2023-10-14 06:28:54] 2023-10-14 12:28:36,237 | INFO     | architecture information:
[2023-10-14 06:28:54] 2023-10-14 12:28:36,244 | INFO     | executing command: cat /etc/os-release
[2023-10-14 06:28:54] 2023-10-14 12:28:36,263 | INFO     | cat /etc/os-release:
[2023-10-14 06:28:54] NAME="CentOS Linux"
[2023-10-14 06:28:54] VERSION="7 (Core)"
[2023-10-14 06:28:54] ID="centos"
[2023-10-14 06:28:54] ID_LIKE="rhel fedora"
[2023-10-14 06:28:54] VERSION_ID="7"
[2023-10-14 06:28:54] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-10-14 06:28:54] ANSI_COLOR="0;31"
[2023-10-14 06:28:54] CPE_NAME="cpe:/o:centos:centos:7"
[2023-10-14 06:28:54] HOME_URL="https://www.centos.org/"
[2023-10-14 06:28:54] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-10-14 06:28:54] 
[2023-10-14 06:28:54] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-10-14 06:28:54] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-10-14 06:28:54] REDHAT_SUPPORT_PRODUCT="centos"
[2023-10-14 06:28:54] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-10-14 06:28:54] 
[2023-10-14 06:28:54] 2023-10-14 12:28:36,263 | INFO     | **************************************
[2023-10-14 06:28:54] 2023-10-14 12:28:36,764 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/9
[2023-10-14 06:28:54] 2023-10-14 12:28:36,780 | INFO     | sufficient remaining disk space (211076251648 B)
[2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | INFO     | found 0 job(s) in 20 queues
[2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-10-14 06:28:54] 2023-10-14 12:28:36,781 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-10-14 06:28:54] 2023-10-14 12:28:36,787 | WARNING  | job monitor detected an abort_job request (signal=None)
[2023-10-14 06:28:54] 2023-10-14 12:28:36,787 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-10-14 06:28:54] 2023-10-14 12:28:36,787 | INFO     | will abort loop
[2023-10-14 06:28:54] 2023-10-14 12:28:37,784 | INFO     | [job] retrieve thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:37,792 | INFO     | [job] job monitor thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:37,889 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-10-14 06:28:54] 2023-10-14 12:28:38,096 | INFO     | [job] validate thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:38,128 | INFO     | [data] control thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:38,284 | INFO     | [job] create_data_payload thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:38,476 | INFO     | [payload] validate_pre thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:38,524 | INFO     | [payload] control thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:38,736 | INFO     | [data] copytool_in thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:38,804 | INFO     | [payload] execute_payloads thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:39,016 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-10-14 06:28:54] 2023-10-14 12:28:39,072 | INFO     | [payload] validate_post thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:39,104 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-10-14 06:28:54] 2023-10-14 12:28:39,276 | INFO     | [payload] failed_post thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:39,352 | INFO     | [job] control thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:39,892 | INFO     | [data] copytool_out thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:40,020 | INFO     | [job] queue monitor thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:43,108 | INFO     | [data] queue_monitor thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:47,488 | INFO     | job.realtimelogging is not enabled
[2023-10-14 06:28:54] 2023-10-14 12:28:48,492 | INFO     | [payload] run_realtimelog thread has finished
[2023-10-14 06:28:54] 2023-10-14 12:28:48,888 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140517458077504)>', '<ExcThread(monitor, started 140516901517056)>']
[2023-10-14 06:28:54] 2023-10-14 12:28:49,832 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-10-14 06:28:54] 2023-10-14 12:28:49,832 | INFO     | [monitor] control thread has ended
[2023-10-14 06:28:54] 2023-10-14 12:28:53,912 | INFO     | end of generic workflow (traces error code: 0)
[2023-10-14 06:28:54] 2023-10-14 12:28:53,913 | INFO     | traces error code: 0
[2023-10-14 06:28:54] 2023-10-14 12:28:53,913 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-10-14 06:28:54] 2023-10-14 12:28:53,962 [wrapper] ==== pilot stdout END ====
[2023-10-14 06:28:54] 2023-10-14 12:28:53,964 [wrapper] ==== wrapper stdout RESUME ====
[2023-10-14 06:28:54] 2023-10-14 12:28:53,969 [wrapper] pilotpid: 2592049
[2023-10-14 06:28:54] 2023-10-14 12:28:53,977 [wrapper] Pilot exit status: 0
[2023-10-14 06:28:54] 2023-10-14 12:28:53,997 [wrapper] pandaids: 5989861637
[2023-10-14 06:28:54] 2023-10-14 12:28:54,003 [wrapper] apfmon messages muted
[2023-10-14 06:28:54] 2023-10-14 12:28:54,005 [wrapper] Test setup, not cleaning
[2023-10-14 06:28:54] 2023-10-14 12:28:54,009 [wrapper] ==== wrapper stdout END ====
[2023-10-14 06:28:54] 2023-10-14 12:28:54,013 [wrapper] ==== wrapper stderr END ====
[2023-10-14 06:28:54] 2023-10-14 12:28:54,019 [wrapper] wrapperexiting ec=0, duration=1778
[2023-10-14 06:28:54] 2023-10-14 12:28:54,025 [wrapper] apfmon messages muted
[2023-10-14 06:28:54]  *** Error codes and diagnostics ***
[2023-10-14 06:28:54]     "exeErrorCode": 0,
[2023-10-14 06:28:54]     "exeErrorDiag": "",
[2023-10-14 06:28:54]     "pilotErrorCode": 0,
[2023-10-14 06:28:54]     "pilotErrorDiag": "",
[2023-10-14 06:28:54]  *** Listing of results directory ***
[2023-10-14 06:28:54] total 43144
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc   433413 Oct 14 05:47 pilot3.tar.gz
[2023-10-14 06:28:54] -rwx------ 1 boinc boinc    27439 Oct 14 05:53 runpilot2-wrapper.sh
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc     4388 Oct 14 05:53 queuedata.json
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc      107 Oct 14 05:59 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-14 06:28:54] -rwxr-xr-x 1 boinc boinc     7986 Oct 14 05:59 run_atlas
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc      112 Oct 14 05:59 job.xml
[2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 05:59 EVNT.04972714._000025.pool.root.1
[2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc    17604 Oct 14 05:59 start_atlas.sh
[2023-10-14 06:28:54] drwxrwx--x 2 boinc boinc     4096 Oct 14 05:59 shared
[2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc   444662 Oct 14 05:59 input.tar.gz
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc     9118 Oct 14 05:59 init_data.xml
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc        0 Oct 14 05:59 boinc_lockfile
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc     2752 Oct 14 05:59 pandaJob.out
[2023-10-14 06:28:54] -rw------- 1 boinc boinc      424 Oct 14 05:59 setup.sh.local
[2023-10-14 06:28:54] -rw------- 1 boinc boinc  1361563 Oct 14 06:00 cric_ddmendpoints.json
[2023-10-14 06:28:54] -rw------- 1 boinc boinc   993144 Oct 14 06:00 agis_schedconf.cvmfs.json
[2023-10-14 06:28:54] drwx------ 4 boinc boinc     4096 Oct 14 06:01 pilot3
[2023-10-14 06:28:54] -rw------- 1 boinc boinc  1239584 Oct 14 06:22 output.1.32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.pool.root
[2023-10-14 06:28:54] -rw------- 1 boinc boinc     1022 Oct 14 06:22 memory_monitor_summary.json
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc      533 Oct 14 06:22 boinc_task_state.xml
[2023-10-14 06:28:54] -rw------- 1 boinc boinc   161356 Oct 14 06:25 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log.tgz
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc       25 Oct 14 06:28 wrapper_checkpoint.txt
[2023-10-14 06:28:54] -rw------- 1 boinc boinc     8478 Oct 14 06:28 heartbeat.json
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc     8192 Oct 14 06:28 boinc_mmap_file
[2023-10-14 06:28:54] -rw------- 1 boinc boinc     4199 Oct 14 06:28 pilotlog.txt
[2023-10-14 06:28:54] -rw------- 1 boinc boinc   207264 Oct 14 06:28 32fdb7ae-6005-4ba3-9136-db2e5b430b73_28718.1.job.log
[2023-10-14 06:28:54] -rw------- 1 boinc boinc      464 Oct 14 06:28 output.list
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc      748 Oct 14 06:28 runtime_log
[2023-10-14 06:28:54] -rw------- 1 boinc boinc  1628160 Oct 14 06:28 result.tar.gz
[2023-10-14 06:28:54] -rw------- 1 boinc boinc      630 Oct 14 06:28 vMaMDmDOsB4n7Olcko1bjSoqABFKDmABFKDm7AsVDm70SKDmxC8HNn.diag
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc    11941 Oct 14 06:28 runtime_log.err
[2023-10-14 06:28:54] -rw-r--r-- 1 boinc boinc    23167 Oct 14 06:28 stderr.txt
[2023-10-14 06:28:54] HITS file was successfully produced:
[2023-10-14 06:28:54] -rw------- 1 boinc boinc 1239584 Oct 14 06:22 shared/HITS.pool.root.1
[2023-10-14 06:28:54]  *** Contents of shared directory: ***
[2023-10-14 06:28:54] total 39880
[2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 05:59 ATLAS.root_0
[2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc    17604 Oct 14 05:59 start_atlas.sh
[2023-10-14 06:28:54] -rw-r--r-- 2 boinc boinc   444662 Oct 14 05:59 input.tar.gz
[2023-10-14 06:28:54] -rw------- 1 boinc boinc  1239584 Oct 14 06:22 HITS.pool.root.1
[2023-10-14 06:28:54] -rw------- 1 boinc boinc  1628160 Oct 14 06:28 result.tar.gz
06:28:55 (2588251): run_atlas exited; CPU time 563.927953
06:28:55 (2588251): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN