Name 6giNDm8KtB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmJ1SKDmbQaTvm_0
Workunit 2338439
Created 14 Oct 2023, 12:54:30 UTC
Sent 14 Oct 2023, 13:06:57 UTC
Report deadline 21 Oct 2023, 13:06:57 UTC
Received 14 Oct 2023, 13:36:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4662
Run time 27 min 28 sec
CPU time 9 min 24 sec
Validate state Valid
Credit 19.35
Device peak FLOPS 4.45 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.48 GB
Peak swap size 2.12 GB
Peak disk usage 80.39 MB

Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
07:09:08 (2648713): wrapper (7.7.26015): starting
07:09:08 (2648713): wrapper: running run_atlas (--nthreads 1)
[2023-10-14 07:09:08] Arguments: --nthreads 1
[2023-10-14 07:09:08] Threads: 1
[2023-10-14 07:09:08] Checking for CVMFS
[2023-10-14 07:09:08] Probing /cvmfs/atlas.cern.ch... OK
[2023-10-14 07:09:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-10-14 07:09:08] Running cvmfs_config stat atlas.cern.ch
[2023-10-14 07:09:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-10-14 07:09:09] 2.11.0.0 2648414 0 28224 124746 3 3 3361653 4096001 0 130560 0 3773 100.000 0 0 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-10-14 07:09:09] CVMFS is ok
[2023-10-14 07:09:09] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-10-14 07:09:09] Small home clusters do not require a local http proxy but it is suggested if
[2023-10-14 07:09:09] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-10-14 07:09:09] Further information can be found at the LHC@home message board.
[2023-10-14 07:09:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-10-14 07:09:09] Checking for apptainer binary...
[2023-10-14 07:09:09] Using apptainer found in PATH at /usr/local/bin/apptainer
[2023-10-14 07:09:09] Running /usr/local/bin/apptainer --version
[2023-10-14 07:09:09] apptainer version 1.2.3+286-g3ac6f0cb6
[2023-10-14 07:09:09] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-10-14 07:09:09] T5810
[2023-10-14 07:09:09] apptainer works
[2023-10-14 07:09:09] Starting ATLAS job with PandaID=5989887727
[2023-10-14 07:09:09] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-10-14 07:36:34]  *** The last 200 lines of the pilot log: ***
[2023-10-14 07:36:34] 2023-10-14 13:35:34,972 | INFO     | monitor loop #215: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:34,972 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:37,475 | INFO     | monitor loop #216: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:37,475 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:39,976 | INFO     | monitor loop #217: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:39,976 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:42,479 | INFO     | monitor loop #218: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:42,479 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:43,536 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-10-14 07:36:34] 2023-10-14 13:35:43,962 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-10-14 07:36:34] 2023-10-14 13:35:43,962 | INFO     | will try again after 18s..
[2023-10-14 07:36:34] 2023-10-14 13:35:44,980 | INFO     | monitor loop #219: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:44,980 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:47,483 | INFO     | monitor loop #220: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:47,483 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:49,984 | INFO     | monitor loop #221: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:49,984 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:52,487 | INFO     | monitor loop #222: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:52,487 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:54,988 | INFO     | monitor loop #223: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:54,988 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:57,491 | INFO     | monitor loop #224: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:57,491 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:35:59,992 | INFO     | monitor loop #225: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:35:59,992 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:36:02,048 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-10-14 07:36:34] 2023-10-14 13:36:02,495 | INFO     | monitor loop #226: job 0:5989887727 is in state 'stageout'
[2023-10-14 07:36:34] 2023-10-14 13:36:02,495 | WARNING  | aborting job monitor tasks since payload process 2667238 is not running
[2023-10-14 07:36:34] 2023-10-14 13:36:02,517 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-10-14 07:36:34] 2023-10-14 13:36:02,517 | WARNING  | cache file=/var/lib/boinc-client/slots/6/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/6/agis
[2023-10-14 07:36:34] 2023-10-14 13:36:02,563 | INFO     | transferring file f9f60c43-53f1-4bde-97ce-28c275be3f67_52466.1.job.log.tgz from /var/lib/boinc-client/slots/6/PanDA_Pilot-5989887727/f9f60c43-53f1-4bde-97ce-28c275
[2023-10-14 07:36:34] 2023-10-14 13:36:02,563 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-5989887727/f9f60c43-53f1-4bde-97ce-28c275be3f67_52466.1.job.log.tgz /var/lib/boinc-cli
[2023-10-14 07:36:34] 2023-10-14 13:36:02,580 | INFO     | Adding to output.list: f9f60c43-53f1-4bde-97ce-28c275be3f67_52466.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/2d/d2/f9f60c43-53f1-
[2023-10-14 07:36:34] 2023-10-14 13:36:02,580 | INFO     | summary of transferred files:
[2023-10-14 07:36:34] 2023-10-14 13:36:02,581 | INFO     |  -- lfn=f9f60c43-53f1-4bde-97ce-28c275be3f67_52466.1.job.log.tgz, status_code=0, status=transferred
[2023-10-14 07:36:34] 2023-10-14 13:36:02,581 | INFO     | stage-out finished correctly
[2023-10-14 07:36:34] 2023-10-14 13:36:02,715 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-10-14 07:36:34] 2023-10-14 13:36:04,544 | INFO     | job 5989887727 has state=finished
[2023-10-14 07:36:34] 2023-10-14 13:36:04,545 | INFO     | preparing for final server update for job 5989887727 in state='finished'
[2023-10-14 07:36:34] 2023-10-14 13:36:04,545 | INFO     | this job has now completed (state=finished)
[2023-10-14 07:36:34] 2023-10-14 13:36:04,545 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-10-14 07:36:34] 2023-10-14 13:36:04,545 | INFO     | job 5989887727 has finished - writing final server update
[2023-10-14 07:36:34] 2023-10-14 13:36:04,545 | INFO     | total number of processed events: 2 (read)
[2023-10-14 07:36:34] 2023-10-14 13:36:04,566 | INFO     | executing command: lscpu
[2023-10-14 07:36:34] 2023-10-14 13:36:04,587 | INFO     | found 14 cores (14 cores per socket, 1 sockets)
[2023-10-14 07:36:34] 2023-10-14 13:36:04,587 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-10-14 07:36:34] 2023-10-14 13:36:04,625 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-10-14 07:36:34] 2023-10-14 13:36:04,996 | INFO     | monitor loop #227: job 0:5989887727 is in state 'finished'
[2023-10-14 07:36:34] 2023-10-14 13:36:04,997 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 07:36:34] 2023-10-14 13:36:07,499 | INFO     | monitor loop #228: job 0:5989887727 is in state 'finished'
[2023-10-14 07:36:34] 2023-10-14 13:36:07,500 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 07:36:34] 2023-10-14 13:36:10,000 | INFO     | monitor loop #229: job 0:5989887727 is in state 'finished'
[2023-10-14 07:36:34] 2023-10-14 13:36:10,000 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 07:36:34] 2023-10-14 13:36:12,503 | INFO     | monitor loop #230: job 0:5989887727 is in state 'finished'
[2023-10-14 07:36:34] 2023-10-14 13:36:12,503 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-14 07:36:34] 2023-10-14 13:36:14,548 | INFO     | CPU arch script returned: x86-64-v3
[2023-10-14 07:36:34] 2023-10-14 13:36:14,548 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-5989887727/memory_monitor_summary.json (trf name=prmon)
[2023-10-14 07:36:34] 2023-10-14 13:36:14,549 | INFO     | extracted standard info from prmon json
[2023-10-14 07:36:34] 2023-10-14 13:36:14,549 | INFO     | extracted standard memory fields from prmon json
[2023-10-14 07:36:34] 2023-10-14 13:36:14,550 | INFO     | fitting pss+swap vs Time
[2023-10-14 07:36:34] 2023-10-14 13:36:14,551 | INFO     | current memory leak: 1755.39 B/s (using 10 data points, chi2=0.08)
[2023-10-14 07:36:34] 2023-10-14 13:36:14,551 | INFO     | ..............................
[2023-10-14 07:36:34] 2023-10-14 13:36:14,551 | INFO     | . Timing measurements:
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | . get job = 37 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | . initial setup = 80 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | . payload setup = 12 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | . stage-in = 67 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | . payload execution = 1037 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | . stage-out = 347 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | . log creation = 0 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,552 | INFO     | ..............................
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | 
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | job summary report
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | --------------------------------------------------
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | PanDA job id: 5989887727
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | task id: NULL
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | errors: (none)
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | status: LOG_TRANSFER = DONE 
[2023-10-14 07:36:34] 2023-10-14 13:36:14,637 | INFO     | pilot state: finished 
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | transexitcode: 0
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | exeerrorcode: 0
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | exeerrordiag: 
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | exitcode: 0
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | exitmsg: OK
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | cpuconsumptiontime: 562 s
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | nevents: 2
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | neventsw: 0
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | pid: 2667238
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | pgrp: 2667238
[2023-10-14 07:36:34] 2023-10-14 13:36:14,638 | INFO     | corecount: 1
[2023-10-14 07:36:34] 2023-10-14 13:36:14,639 | INFO     | event service: False
[2023-10-14 07:36:34] 2023-10-14 13:36:14,639 | INFO     | sizes: {0: 2434572, 1: 2436115, 12: 2436261, 22: 2436289, 33: 2436317, 43: 2436345, 54: 2436501, 65: 2436529, 74: 2436617, 75: 2436645, 1053: 2459175, 1401: 246829
[2023-10-14 07:36:34] 2023-10-14 13:36:14,639 | INFO     | --------------------------------------------------
[2023-10-14 07:36:34] 2023-10-14 13:36:14,639 | INFO     | 
[2023-10-14 07:36:34] 2023-10-14 13:36:14,639 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2023-10-14 07:36:34] 2023-10-14 13:36:14,667 | INFO     | queue jobs had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,667 | INFO     | queue payloads had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,667 | INFO     | queue data_in had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,667 | INFO     | queue data_out had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,667 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,667 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,667 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue completed_jobids has 1 job(s)
[2023-10-14 07:36:34] 2023-10-14 13:36:14,668 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,669 | INFO     | queue messages had 0 job(s) [purged]
[2023-10-14 07:36:34] 2023-10-14 13:36:14,669 | INFO     | job 5989887727 has completed (purged errors)
[2023-10-14 07:36:34] 2023-10-14 13:36:14,669 | INFO     | overall cleanup function is called
[2023-10-14 07:36:34] 2023-10-14 13:36:15,672 | INFO     | --- collectZombieJob: --- 10, [2667238]
[2023-10-14 07:36:34] 2023-10-14 13:36:15,672 | INFO     | zombie collector waiting for pid 2667238
[2023-10-14 07:36:34] 2023-10-14 13:36:15,672 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-10-14 07:36:34] 2023-10-14 13:36:16,676 | INFO     | collected zombie processes
[2023-10-14 07:36:34] 2023-10-14 13:36:16,676 | INFO     | will now attempt to kill all subprocesses of pid=2667238
[2023-10-14 07:36:34] 2023-10-14 13:36:16,738 | INFO     | process IDs to be killed: [2667238] (in reverse order)
[2023-10-14 07:36:34] 2023-10-14 13:36:16,781 | WARNING  | found no corresponding commands to process id(s)
[2023-10-14 07:36:34] 2023-10-14 13:36:16,781 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-10-14 07:36:34] 2023-10-14 13:36:16,784 | INFO     | did not find any defunct processes belonging to 2667238
[2023-10-14 07:36:34] 2023-10-14 13:36:16,787 | INFO     | did not find any defunct processes belonging to 2667238
[2023-10-14 07:36:34] 2023-10-14 13:36:16,787 | INFO     | ready for new job
[2023-10-14 07:36:34] 2023-10-14 13:36:16,787 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-10-14 07:36:34] 2023-10-14 13:36:16,788 | INFO     | **************************************
[2023-10-14 07:36:34] 2023-10-14 13:36:16,788 | INFO     | ***  PanDA Pilot version 3.6.9.10  ***
[2023-10-14 07:36:34] 2023-10-14 13:36:16,788 | INFO     | **************************************
[2023-10-14 07:36:34] 2023-10-14 13:36:16,788 | INFO     | 
[2023-10-14 07:36:34] 2023-10-14 13:36:16,813 | INFO     | architecture information:
[2023-10-14 07:36:34] 2023-10-14 13:36:16,814 | INFO     | executing command: cat /etc/os-release
[2023-10-14 07:36:34] 2023-10-14 13:36:16,821 | INFO     | cat /etc/os-release:
[2023-10-14 07:36:34] NAME="CentOS Linux"
[2023-10-14 07:36:34] VERSION="7 (Core)"
[2023-10-14 07:36:34] ID="centos"
[2023-10-14 07:36:34] ID_LIKE="rhel fedora"
[2023-10-14 07:36:34] VERSION_ID="7"
[2023-10-14 07:36:34] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-10-14 07:36:34] ANSI_COLOR="0;31"
[2023-10-14 07:36:34] CPE_NAME="cpe:/o:centos:centos:7"
[2023-10-14 07:36:34] HOME_URL="https://www.centos.org/"
[2023-10-14 07:36:34] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-10-14 07:36:34] 
[2023-10-14 07:36:34] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-10-14 07:36:34] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-10-14 07:36:34] REDHAT_SUPPORT_PRODUCT="centos"
[2023-10-14 07:36:34] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-10-14 07:36:34] 
[2023-10-14 07:36:34] 2023-10-14 13:36:16,822 | INFO     | **************************************
[2023-10-14 07:36:34] 2023-10-14 13:36:17,324 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2023-10-14 07:36:34] 2023-10-14 13:36:17,335 | INFO     | sufficient remaining disk space (211058425856 B)
[2023-10-14 07:36:34] 2023-10-14 13:36:17,335 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-10-14 07:36:34] 2023-10-14 13:36:17,335 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-10-14 07:36:34] 2023-10-14 13:36:17,511 | WARNING  | job monitor detected an abort_job request (signal=None)
[2023-10-14 07:36:34] 2023-10-14 13:36:17,511 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-10-14 07:36:34] 2023-10-14 13:36:17,511 | INFO     | will abort loop
[2023-10-14 07:36:34] 2023-10-14 13:36:17,807 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-10-14 07:36:34] 2023-10-14 13:36:18,020 | INFO     | found 0 job(s) in 20 queues
[2023-10-14 07:36:34] 2023-10-14 13:36:18,020 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-10-14 07:36:34] 2023-10-14 13:36:18,021 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-10-14 07:36:34] 2023-10-14 13:36:18,187 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-10-14 07:36:34] 2023-10-14 13:36:18,340 | INFO     | [job] retrieve thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,412 | INFO     | [data] copytool_in thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,420 | INFO     | [job] validate thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,516 | INFO     | [job] job monitor thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,548 | INFO     | [payload] control thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,572 | INFO     | [job] create_data_payload thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,660 | INFO     | [data] control thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,696 | INFO     | [payload] validate_pre thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,860 | INFO     | [payload] failed_post thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:18,968 | INFO     | [payload] execute_payloads thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:19,464 | INFO     | [payload] validate_post thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:19,552 | INFO     | [job] control thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:19,644 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-10-14 07:36:34] 2023-10-14 13:36:20,192 | INFO     | [data] copytool_out thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:20,648 | INFO     | [job] queue monitor thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:21,812 | INFO     | [data] queue_monitor thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:27,756 | INFO     | job.realtimelogging is not enabled
[2023-10-14 07:36:34] 2023-10-14 13:36:28,760 | INFO     | [payload] run_realtimelog thread has finished
[2023-10-14 07:36:34] 2023-10-14 13:36:29,077 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140428576749376)>', '<ExcThread(monitor, started 140428158420736)>']
[2023-10-14 07:36:34] 2023-10-14 13:36:30,068 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-10-14 07:36:34] 2023-10-14 13:36:30,068 | INFO     | [monitor] control thread has ended
[2023-10-14 07:36:34] 2023-10-14 13:36:34,100 | INFO     | end of generic workflow (traces error code: 0)
[2023-10-14 07:36:34] 2023-10-14 13:36:34,101 | INFO     | traces error code: 0
[2023-10-14 07:36:34] 2023-10-14 13:36:34,101 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-10-14 07:36:34] 2023-10-14 13:36:34,150 [wrapper] ==== pilot stdout END ====
[2023-10-14 07:36:34] 2023-10-14 13:36:34,153 [wrapper] ==== wrapper stdout RESUME ====
[2023-10-14 07:36:34] 2023-10-14 13:36:34,154 [wrapper] pilotpid: 2656198
[2023-10-14 07:36:34] 2023-10-14 13:36:34,156 [wrapper] Pilot exit status: 0
[2023-10-14 07:36:34] 2023-10-14 13:36:34,165 [wrapper] pandaids: 5989887727
[2023-10-14 07:36:34] 2023-10-14 13:36:34,169 [wrapper] apfmon messages muted
[2023-10-14 07:36:34] 2023-10-14 13:36:34,170 [wrapper] Test setup, not cleaning
[2023-10-14 07:36:34] 2023-10-14 13:36:34,177 [wrapper] ==== wrapper stdout END ====
[2023-10-14 07:36:34] 2023-10-14 13:36:34,179 [wrapper] ==== wrapper stderr END ====
[2023-10-14 07:36:34] 2023-10-14 13:36:34,195 [wrapper] wrapperexiting ec=0, duration=1644
[2023-10-14 07:36:34] 2023-10-14 13:36:34,197 [wrapper] apfmon messages muted
[2023-10-14 07:36:34]  *** Error codes and diagnostics ***
[2023-10-14 07:36:34]     "exeErrorCode": 0,
[2023-10-14 07:36:34]     "exeErrorDiag": "",
[2023-10-14 07:36:34]     "pilotErrorCode": 0,
[2023-10-14 07:36:34]     "pilotErrorDiag": "",
[2023-10-14 07:36:34]  *** Listing of results directory ***
[2023-10-14 07:36:34] total 43116
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc   433413 Oct 14 06:22 pilot3.tar.gz
[2023-10-14 07:36:34] -rwx------ 1 boinc boinc    27439 Oct 14 06:54 runpilot2-wrapper.sh
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc     4388 Oct 14 06:54 queuedata.json
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc      107 Oct 14 07:09 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-14 07:36:34] -rwxr-xr-x 1 boinc boinc     7986 Oct 14 07:09 run_atlas
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc      112 Oct 14 07:09 job.xml
[2023-10-14 07:36:34] -rw-r--r-- 2 boinc boinc    17604 Oct 14 07:09 start_atlas.sh
[2023-10-14 07:36:34] drwxrwx--x 2 boinc boinc     4096 Oct 14 07:09 shared
[2023-10-14 07:36:34] -rw-r--r-- 2 boinc boinc   444665 Oct 14 07:09 input.tar.gz
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc     9118 Oct 14 07:09 init_data.xml
[2023-10-14 07:36:34] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 07:09 EVNT.04972714._000025.pool.root.1
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc        0 Oct 14 07:09 boinc_lockfile
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc     2752 Oct 14 07:09 pandaJob.out
[2023-10-14 07:36:34] -rw------- 1 boinc boinc      424 Oct 14 07:09 setup.sh.local
[2023-10-14 07:36:34] -rw------- 1 boinc boinc  1361563 Oct 14 07:10 cric_ddmendpoints.json
[2023-10-14 07:36:34] -rw------- 1 boinc boinc   993160 Oct 14 07:10 agis_schedconf.cvmfs.json
[2023-10-14 07:36:34] drwx------ 4 boinc boinc     4096 Oct 14 07:11 pilot3
[2023-10-14 07:36:34] -rw------- 1 boinc boinc  1239589 Oct 14 07:30 output.1.f9f60c43-53f1-4bde-97ce-28c275be3f67_52466.pool.root
[2023-10-14 07:36:34] -rw------- 1 boinc boinc     1022 Oct 14 07:30 memory_monitor_summary.json
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc      533 Oct 14 07:30 boinc_task_state.xml
[2023-10-14 07:36:34] -rw------- 1 boinc boinc   160245 Oct 14 07:33 f9f60c43-53f1-4bde-97ce-28c275be3f67_52466.1.job.log.tgz
[2023-10-14 07:36:34] -rw------- 1 boinc boinc     8480 Oct 14 07:36 heartbeat.json
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc       25 Oct 14 07:36 wrapper_checkpoint.txt
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc     8192 Oct 14 07:36 boinc_mmap_file
[2023-10-14 07:36:34] -rw------- 1 boinc boinc     4076 Oct 14 07:36 pilotlog.txt
[2023-10-14 07:36:34] -rw------- 1 boinc boinc   193764 Oct 14 07:36 f9f60c43-53f1-4bde-97ce-28c275be3f67_52466.1.job.log
[2023-10-14 07:36:34] -rw------- 1 boinc boinc      464 Oct 14 07:36 output.list
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc      748 Oct 14 07:36 runtime_log
[2023-10-14 07:36:34] -rw------- 1 boinc boinc  1617920 Oct 14 07:36 result.tar.gz
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc    11941 Oct 14 07:36 runtime_log.err
[2023-10-14 07:36:34] -rw------- 1 boinc boinc      631 Oct 14 07:36 6giNDm8KtB4n7Olcko1bjSoqABFKDmABFKDm7AsVDmJ1SKDmbQaTvm.diag
[2023-10-14 07:36:34] -rw-r--r-- 1 boinc boinc    23204 Oct 14 07:36 stderr.txt
[2023-10-14 07:36:34] HITS file was successfully produced:
[2023-10-14 07:36:34] -rw------- 1 boinc boinc 1239589 Oct 14 07:30 shared/HITS.pool.root.1
[2023-10-14 07:36:34]  *** Contents of shared directory: ***
[2023-10-14 07:36:34] total 39868
[2023-10-14 07:36:34] -rw-r--r-- 2 boinc boinc    17604 Oct 14 07:09 start_atlas.sh
[2023-10-14 07:36:34] -rw-r--r-- 2 boinc boinc   444665 Oct 14 07:09 input.tar.gz
[2023-10-14 07:36:34] -rw-r--r-- 2 boinc boinc 37498453 Oct 14 07:09 ATLAS.root_0
[2023-10-14 07:36:34] -rw------- 1 boinc boinc  1239589 Oct 14 07:30 HITS.pool.root.1
[2023-10-14 07:36:34] -rw------- 1 boinc boinc  1617920 Oct 14 07:36 result.tar.gz
07:36:35 (2648713): run_atlas exited; CPU time 564.466742
07:36:35 (2648713): called boinc_finish(0)

</stderr_txt>
]]>


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