Name | gHpNDm7GXC4n7Olcko1bjSoqABFKDmABFKDm7AsVDm58SKDmAYDzTo_0 |
Workunit | 2338856 |
Created | 16 Oct 2023, 7:33:03 UTC |
Sent | 16 Oct 2023, 7:34:37 UTC |
Report deadline | 23 Oct 2023, 7:34:37 UTC |
Received | 16 Oct 2023, 9:06:57 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4662 |
Run time | 24 min 12 sec |
CPU time | 3 min 58 sec |
Validate state | Valid |
Credit | 17.08 |
Device peak FLOPS | 4.45 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.68 GB |
Peak swap size | 19.07 GB |
Peak disk usage | 80.15 MB |
<core_client_version>7.16.6</core_client_version> <![CDATA[ <stderr_txt> 01:42:11 (2995031): wrapper (7.7.26015): starting 01:42:11 (2995031): wrapper: running run_atlas (--nthreads 1) [2023-10-16 01:42:11] Arguments: --nthreads 1 [2023-10-16 01:42:11] Threads: 1 [2023-10-16 01:42:11] Checking for CVMFS [2023-10-16 01:42:12] Probing /cvmfs/atlas.cern.ch... OK [2023-10-16 01:42:15] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-10-16 01:42:15] Running cvmfs_config stat atlas.cern.ch [2023-10-16 01:42:15] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-10-16 01:42:15] 2.11.0.0 2995167 0 24948 124812 3 1 3774991 4096000 0 130560 0 0 0.000 960 1403 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1 [2023-10-16 01:42:15] CVMFS is ok [2023-10-16 01:42:15] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-10-16 01:42:15] Small home clusters do not require a local http proxy but it is suggested if [2023-10-16 01:42:15] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-10-16 01:42:15] Further information can be found at the LHC@home message board. [2023-10-16 01:42:15] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-10-16 01:42:15] Checking for apptainer binary... [2023-10-16 01:42:15] Using apptainer found in PATH at /usr/local/bin/apptainer [2023-10-16 01:42:15] Running /usr/local/bin/apptainer --version [2023-10-16 01:42:15] apptainer version 1.2.3+286-g3ac6f0cb6 [2023-10-16 01:42:15] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-10-16 01:42:16] T5810 [2023-10-16 01:42:16] apptainer works [2023-10-16 01:42:16] Starting ATLAS job with PandaID=5990956579 [2023-10-16 01:42:16] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/28 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-10-16 02:06:21] *** The last 200 lines of the pilot log: *** [2023-10-16 02:06:21] 2023-10-16 08:05:14,567 | INFO | monitor loop #237: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:14,568 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:17,068 | INFO | monitor loop #238: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:17,068 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:19,571 | INFO | monitor loop #239: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:19,571 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:22,072 | INFO | monitor loop #240: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:22,072 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:24,575 | INFO | monitor loop #241: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:24,576 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:27,076 | INFO | monitor loop #242: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:27,076 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:29,579 | INFO | monitor loop #243: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:29,579 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:32,080 | INFO | monitor loop #244: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:32,080 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:34,583 | INFO | monitor loop #245: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:34,584 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:37,084 | INFO | monitor loop #246: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:37,084 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:39,587 | INFO | monitor loop #247: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:39,587 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:42,088 | INFO | monitor loop #248: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:42,088 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:44,480 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-10-16 02:06:21] 2023-10-16 08:05:44,591 | INFO | monitor loop #249: job 0:5990956579 is in state 'stageout' [2023-10-16 02:06:21] 2023-10-16 08:05:44,591 | WARNING | aborting job monitor tasks since payload process 3006606 is not running [2023-10-16 02:06:21] 2023-10-16 08:05:45,263 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-10-16 02:06:21] 2023-10-16 08:05:45,264 | WARNING | cache file=/var/lib/boinc-client/slots/28/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/28/ag [2023-10-16 02:06:21] 2023-10-16 08:05:45,316 | INFO | transferring file 3af6857e-46a6-4149-b826-93550ff0352d_67834.1.job.log.tgz from /var/lib/boinc-client/slots/28/PanDA_Pilot-5990956579/3af6857e-46a6-4149-b826-93550 [2023-10-16 02:06:21] 2023-10-16 08:05:45,316 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/28/PanDA_Pilot-5990956579/3af6857e-46a6-4149-b826-93550ff0352d_67834.1.job.log.tgz /var/lib/boinc-cl [2023-10-16 02:06:21] 2023-10-16 08:05:45,348 | INFO | Adding to output.list: 3af6857e-46a6-4149-b826-93550ff0352d_67834.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/73/90/3af6857e-46a6- [2023-10-16 02:06:21] 2023-10-16 08:05:45,349 | INFO | summary of transferred files: [2023-10-16 02:06:21] 2023-10-16 08:05:45,349 | INFO | -- lfn=3af6857e-46a6-4149-b826-93550ff0352d_67834.1.job.log.tgz, status_code=0, status=transferred [2023-10-16 02:06:21] 2023-10-16 08:05:45,349 | INFO | stage-out finished correctly [2023-10-16 02:06:21] 2023-10-16 08:05:47,092 | INFO | monitor loop #250: job 0:5990956579 is in state 'finished' [2023-10-16 02:06:21] 2023-10-16 08:05:47,092 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-16 02:06:21] 2023-10-16 08:05:47,579 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-10-16 02:06:21] 2023-10-16 08:05:48,296 | INFO | job 5990956579 has state=finished [2023-10-16 02:06:21] 2023-10-16 08:05:48,296 | INFO | preparing for final server update for job 5990956579 in state='finished' [2023-10-16 02:06:21] 2023-10-16 08:05:48,297 | INFO | this job has now completed (state=finished) [2023-10-16 02:06:21] 2023-10-16 08:05:48,297 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-10-16 02:06:21] 2023-10-16 08:05:48,297 | INFO | job 5990956579 has finished - writing final server update [2023-10-16 02:06:21] 2023-10-16 08:05:48,297 | INFO | total number of processed events: 2 (read) [2023-10-16 02:06:21] 2023-10-16 08:05:48,318 | INFO | executing command: lscpu [2023-10-16 02:06:21] 2023-10-16 08:05:48,351 | INFO | found 14 cores (14 cores per socket, 1 sockets) [2023-10-16 02:06:21] 2023-10-16 08:05:48,352 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-10-16 02:06:21] 2023-10-16 08:05:48,385 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-10-16 02:06:21] 2023-10-16 08:05:49,595 | INFO | monitor loop #251: job 0:5990956579 is in state 'finished' [2023-10-16 02:06:21] 2023-10-16 08:05:49,596 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-16 02:06:21] 2023-10-16 08:05:52,096 | INFO | monitor loop #252: job 0:5990956579 is in state 'finished' [2023-10-16 02:06:21] 2023-10-16 08:05:52,096 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-16 02:06:21] 2023-10-16 08:05:54,599 | INFO | monitor loop #253: job 0:5990956579 is in state 'finished' [2023-10-16 02:06:21] 2023-10-16 08:05:54,599 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-16 02:06:21] 2023-10-16 08:05:57,100 | INFO | monitor loop #254: job 0:5990956579 is in state 'finished' [2023-10-16 02:06:21] 2023-10-16 08:05:57,104 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-10-16 02:06:21] 2023-10-16 08:05:59,311 | INFO | CPU arch script returned: x86-64-v3 [2023-10-16 02:06:21] 2023-10-16 08:05:59,312 | INFO | using path: /var/lib/boinc-client/slots/28/PanDA_Pilot-5990956579/memory_monitor_summary.json (trf name=prmon) [2023-10-16 02:06:21] 2023-10-16 08:05:59,313 | INFO | extracted standard info from prmon json [2023-10-16 02:06:21] 2023-10-16 08:05:59,313 | INFO | extracted standard memory fields from prmon json [2023-10-16 02:06:21] 2023-10-16 08:05:59,314 | WARNING | wrong length of table data, x=[1697442695.0, 1697442756.0, 1697442817.0, 1697442878.0, 1697442939.0], y=[1011216.0, 1023692.0, 1127964.0, 1478968.0, 1560512.0] (mu [2023-10-16 02:06:21] 2023-10-16 08:05:59,314 | INFO | .............................. [2023-10-16 02:06:21] 2023-10-16 08:05:59,314 | INFO | . Timing measurements: [2023-10-16 02:06:21] 2023-10-16 08:05:59,314 | INFO | . get job = 52 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,315 | INFO | . initial setup = 80 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,315 | INFO | . payload setup = 9 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,315 | INFO | . stage-in = 62 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,315 | INFO | . payload execution = 697 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,315 | INFO | . stage-out = 463 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,315 | INFO | . log creation = 0 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,315 | INFO | .............................. [2023-10-16 02:06:21] 2023-10-16 08:05:59,400 | INFO | [2023-10-16 02:06:21] 2023-10-16 08:05:59,400 | INFO | job summary report [2023-10-16 02:06:21] 2023-10-16 08:05:59,400 | INFO | -------------------------------------------------- [2023-10-16 02:06:21] 2023-10-16 08:05:59,400 | INFO | PanDA job id: 5990956579 [2023-10-16 02:06:21] 2023-10-16 08:05:59,400 | INFO | task id: NULL [2023-10-16 02:06:21] 2023-10-16 08:05:59,400 | INFO | errors: (none) [2023-10-16 02:06:21] 2023-10-16 08:05:59,400 | INFO | status: LOG_TRANSFER = DONE [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | pilot state: finished [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | transexitcode: 0 [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | exeerrorcode: 0 [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | exeerrordiag: [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | exitcode: 0 [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | exitmsg: OK [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | cpuconsumptiontime: 236 s [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | nevents: 2 [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | neventsw: 0 [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | pid: 3006606 [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | pgrp: 3006606 [2023-10-16 02:06:21] 2023-10-16 08:05:59,401 | INFO | corecount: 1 [2023-10-16 02:06:21] 2023-10-16 08:05:59,402 | INFO | event service: False [2023-10-16 02:06:21] 2023-10-16 08:05:59,402 | INFO | sizes: {0: 2435926, 11: 2436072, 21: 2436100, 32: 2436128, 43: 2436156, 53: 2436184, 64: 2436340, 70: 2436456, 75: 2436484, 711: 2457871, 1176: 2466937, 1178: 2467 [2023-10-16 02:06:21] 2023-10-16 08:05:59,402 | INFO | -------------------------------------------------- [2023-10-16 02:06:21] 2023-10-16 08:05:59,402 | INFO | [2023-10-16 02:06:21] 2023-10-16 08:05:59,402 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/28 [2023-10-16 02:06:21] 2023-10-16 08:05:59,425 | INFO | queue jobs had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,425 | INFO | queue payloads had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,425 | INFO | queue data_in had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,425 | INFO | queue data_out had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue current_data_in had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,426 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,427 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,427 | INFO | queue completed_jobids has 1 job(s) [2023-10-16 02:06:21] 2023-10-16 08:05:59,427 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,427 | INFO | queue messages had 0 job(s) [purged] [2023-10-16 02:06:21] 2023-10-16 08:05:59,427 | INFO | job 5990956579 has completed (purged errors) [2023-10-16 02:06:21] 2023-10-16 08:05:59,427 | INFO | overall cleanup function is called [2023-10-16 02:06:21] 2023-10-16 08:06:00,436 | INFO | --- collectZombieJob: --- 10, [3006606] [2023-10-16 02:06:21] 2023-10-16 08:06:00,436 | INFO | zombie collector waiting for pid 3006606 [2023-10-16 02:06:21] 2023-10-16 08:06:00,436 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-10-16 02:06:21] 2023-10-16 08:06:01,440 | INFO | collected zombie processes [2023-10-16 02:06:21] 2023-10-16 08:06:01,440 | INFO | will now attempt to kill all subprocesses of pid=3006606 [2023-10-16 02:06:21] 2023-10-16 08:06:01,512 | INFO | process IDs to be killed: [3006606] (in reverse order) [2023-10-16 02:06:21] 2023-10-16 08:06:01,556 | WARNING | found no corresponding commands to process id(s) [2023-10-16 02:06:21] 2023-10-16 08:06:01,556 | INFO | Do not look for orphan processes in BOINC jobs [2023-10-16 02:06:21] 2023-10-16 08:06:01,559 | INFO | did not find any defunct processes belonging to 3006606 [2023-10-16 02:06:21] 2023-10-16 08:06:01,567 | INFO | did not find any defunct processes belonging to 3006606 [2023-10-16 02:06:21] 2023-10-16 08:06:01,567 | INFO | ready for new job [2023-10-16 02:06:21] 2023-10-16 08:06:01,567 | INFO | pilot has finished with previous job - re-establishing logging [2023-10-16 02:06:21] 2023-10-16 08:06:01,568 | INFO | ************************************** [2023-10-16 02:06:21] 2023-10-16 08:06:01,568 | INFO | *** PanDA Pilot version 3.6.9.10 *** [2023-10-16 02:06:21] 2023-10-16 08:06:01,568 | INFO | ************************************** [2023-10-16 02:06:21] 2023-10-16 08:06:01,568 | INFO | [2023-10-16 02:06:21] 2023-10-16 08:06:01,589 | INFO | architecture information: [2023-10-16 02:06:21] 2023-10-16 08:06:01,596 | INFO | executing command: cat /etc/os-release [2023-10-16 02:06:21] 2023-10-16 08:06:01,610 | INFO | cat /etc/os-release: [2023-10-16 02:06:21] NAME="CentOS Linux" [2023-10-16 02:06:21] VERSION="7 (Core)" [2023-10-16 02:06:21] ID="centos" [2023-10-16 02:06:21] ID_LIKE="rhel fedora" [2023-10-16 02:06:21] VERSION_ID="7" [2023-10-16 02:06:21] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-10-16 02:06:21] ANSI_COLOR="0;31" [2023-10-16 02:06:21] CPE_NAME="cpe:/o:centos:centos:7" [2023-10-16 02:06:21] HOME_URL="https://www.centos.org/" [2023-10-16 02:06:21] BUG_REPORT_URL="https://bugs.centos.org/" [2023-10-16 02:06:21] [2023-10-16 02:06:21] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-10-16 02:06:21] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-10-16 02:06:21] REDHAT_SUPPORT_PRODUCT="centos" [2023-10-16 02:06:21] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-10-16 02:06:21] [2023-10-16 02:06:21] 2023-10-16 08:06:01,610 | INFO | ************************************** [2023-10-16 02:06:21] 2023-10-16 08:06:02,112 | INFO | executing command: df -mP /var/lib/boinc-client/slots/28 [2023-10-16 02:06:21] 2023-10-16 08:06:02,126 | INFO | sufficient remaining disk space (210638995456 B) [2023-10-16 02:06:21] 2023-10-16 08:06:02,127 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-10-16 02:06:21] 2023-10-16 08:06:02,127 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-10-16 02:06:21] 2023-10-16 08:06:02,127 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-10-16 02:06:21] 2023-10-16 08:06:02,127 | INFO | found 0 job(s) in 20 queues [2023-10-16 02:06:21] 2023-10-16 08:06:02,127 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-10-16 02:06:21] 2023-10-16 08:06:02,127 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-10-16 02:06:21] 2023-10-16 08:06:02,671 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-10-16 02:06:21] 2023-10-16 08:06:03,112 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-10-16 02:06:21] 2023-10-16 08:06:03,112 | INFO | aborting loop [2023-10-16 02:06:21] 2023-10-16 08:06:03,128 | INFO | [job] retrieve thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:03,184 | INFO | [job] validate thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:03,376 | INFO | [job] control thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:03,416 | INFO | [job] create_data_payload thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:03,455 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-10-16 02:06:21] 2023-10-16 08:06:03,608 | INFO | [payload] validate_pre thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:03,744 | INFO | [payload] execute_payloads thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:03,924 | INFO | [payload] validate_post thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:04,000 | INFO | [data] copytool_in thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:04,116 | INFO | [job] job monitor thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:04,192 | INFO | [payload] failed_post thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:04,228 | INFO | [data] control thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:04,340 | INFO | [payload] control thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:04,408 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-10-16 02:06:21] 2023-10-16 08:06:05,412 | INFO | [job] queue monitor thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:05,460 | INFO | [data] copytool_out thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:06,676 | INFO | [data] queue_monitor thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:12,872 | INFO | job.realtimelogging is not enabled [2023-10-16 02:06:21] 2023-10-16 08:06:13,876 | INFO | [payload] run_realtimelog thread has finished [2023-10-16 02:06:21] 2023-10-16 08:06:15,964 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140302965040960)>', '<ExcThread(monitor, started 140302547412736)>'] [2023-10-16 02:06:21] 2023-10-16 08:06:16,184 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-10-16 02:06:21] 2023-10-16 08:06:16,184 | INFO | [monitor] control thread has ended [2023-10-16 02:06:21] 2023-10-16 08:06:20,988 | INFO | end of generic workflow (traces error code: 0) [2023-10-16 02:06:21] 2023-10-16 08:06:20,989 | INFO | traces error code: 0 [2023-10-16 02:06:21] 2023-10-16 08:06:20,989 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-10-16 02:06:21] 2023-10-16 08:06:21,042 [wrapper] ==== pilot stdout END ==== [2023-10-16 02:06:21] 2023-10-16 08:06:21,044 [wrapper] ==== wrapper stdout RESUME ==== [2023-10-16 02:06:21] 2023-10-16 08:06:21,045 [wrapper] pilotpid: 2999238 [2023-10-16 02:06:21] 2023-10-16 08:06:21,052 [wrapper] Pilot exit status: 0 [2023-10-16 02:06:21] 2023-10-16 08:06:21,071 [wrapper] pandaids: 5990956579 [2023-10-16 02:06:21] 2023-10-16 08:06:21,083 [wrapper] apfmon messages muted [2023-10-16 02:06:21] 2023-10-16 08:06:21,084 [wrapper] Test setup, not cleaning [2023-10-16 02:06:21] 2023-10-16 08:06:21,086 [wrapper] ==== wrapper stdout END ==== [2023-10-16 02:06:21] 2023-10-16 08:06:21,089 [wrapper] ==== wrapper stderr END ==== [2023-10-16 02:06:21] 2023-10-16 08:06:21,101 [wrapper] wrapperexiting ec=0, duration=1444 [2023-10-16 02:06:21] 2023-10-16 08:06:21,105 [wrapper] apfmon messages muted [2023-10-16 02:06:21] *** Error codes and diagnostics *** [2023-10-16 02:06:21] "exeErrorCode": 0, [2023-10-16 02:06:21] "exeErrorDiag": "", [2023-10-16 02:06:21] "pilotErrorCode": 0, [2023-10-16 02:06:21] "pilotErrorDiag": "", [2023-10-16 02:06:21] *** Listing of results directory *** [2023-10-16 02:06:21] total 42760 [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 433413 Oct 16 01:04 pilot3.tar.gz [2023-10-16 02:06:21] -rwx------ 1 boinc boinc 27439 Oct 16 01:32 runpilot2-wrapper.sh [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 4388 Oct 16 01:32 queuedata.json [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 107 Oct 16 01:42 wrapper_26015_x86_64-pc-linux-gnu [2023-10-16 02:06:21] -rwxr-xr-x 1 boinc boinc 7986 Oct 16 01:42 run_atlas [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 112 Oct 16 01:42 job.xml [2023-10-16 02:06:21] -rw-r--r-- 2 boinc boinc 17604 Oct 16 01:42 start_atlas.sh [2023-10-16 02:06:21] drwxrwx--x 2 boinc boinc 4096 Oct 16 01:42 shared [2023-10-16 02:06:21] -rw-r--r-- 2 boinc boinc 444617 Oct 16 01:42 input.tar.gz [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 9119 Oct 16 01:42 init_data.xml [2023-10-16 02:06:21] -rw-r--r-- 2 boinc boinc 37498453 Oct 16 01:42 EVNT.04972714._000025.pool.root.1 [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 0 Oct 16 01:42 boinc_lockfile [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 2686 Oct 16 01:42 pandaJob.out [2023-10-16 02:06:21] -rw------- 1 boinc boinc 424 Oct 16 01:42 setup.sh.local [2023-10-16 02:06:21] -rw------- 1 boinc boinc 1361563 Oct 16 01:43 cric_ddmendpoints.json [2023-10-16 02:06:21] -rw------- 1 boinc boinc 994101 Oct 16 01:43 agis_schedconf.cvmfs.json [2023-10-16 02:06:21] drwx------ 4 boinc boinc 4096 Oct 16 01:44 pilot3 [2023-10-16 02:06:21] -rw------- 1 boinc boinc 1068141 Oct 16 01:57 output.1.3af6857e-46a6-4149-b826-93550ff0352d_67834.pool.root [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 532 Oct 16 01:57 boinc_task_state.xml [2023-10-16 02:06:21] -rw------- 1 boinc boinc 1022 Oct 16 01:57 memory_monitor_summary.json [2023-10-16 02:06:21] -rw------- 1 boinc boinc 173821 Oct 16 02:01 3af6857e-46a6-4149-b826-93550ff0352d_67834.1.job.log.tgz [2023-10-16 02:06:21] -rw------- 1 boinc boinc 7082 Oct 16 02:05 heartbeat.json [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 8192 Oct 16 02:06 boinc_mmap_file [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 25 Oct 16 02:06 wrapper_checkpoint.txt [2023-10-16 02:06:21] -rw------- 1 boinc boinc 4105 Oct 16 02:06 pilotlog.txt [2023-10-16 02:06:21] -rw------- 1 boinc boinc 173382 Oct 16 02:06 3af6857e-46a6-4149-b826-93550ff0352d_67834.1.job.log [2023-10-16 02:06:21] -rw------- 1 boinc boinc 464 Oct 16 02:06 output.list [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 748 Oct 16 02:06 runtime_log [2023-10-16 02:06:21] -rw------- 1 boinc boinc 1433600 Oct 16 02:06 result.tar.gz [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 11958 Oct 16 02:06 runtime_log.err [2023-10-16 02:06:21] -rw------- 1 boinc boinc 631 Oct 16 02:06 gHpNDm7GXC4n7Olcko1bjSoqABFKDmABFKDm7AsVDm58SKDmAYDzTo.diag [2023-10-16 02:06:21] -rw-r--r-- 1 boinc boinc 23298 Oct 16 02:06 stderr.txt [2023-10-16 02:06:21] HITS file was successfully produced: [2023-10-16 02:06:21] -rw------- 1 boinc boinc 1068141 Oct 16 01:57 shared/HITS.pool.root.1 [2023-10-16 02:06:21] *** Contents of shared directory: *** [2023-10-16 02:06:21] total 39520 [2023-10-16 02:06:21] -rw-r--r-- 2 boinc boinc 17604 Oct 16 01:42 start_atlas.sh [2023-10-16 02:06:21] -rw-r--r-- 2 boinc boinc 444617 Oct 16 01:42 input.tar.gz [2023-10-16 02:06:21] -rw-r--r-- 2 boinc boinc 37498453 Oct 16 01:42 ATLAS.root_0 [2023-10-16 02:06:21] -rw------- 1 boinc boinc 1068141 Oct 16 01:57 HITS.pool.root.1 [2023-10-16 02:06:21] -rw------- 1 boinc boinc 1433600 Oct 16 02:06 result.tar.gz 02:06:22 (2995031): run_atlas exited; CPU time 238.029467 02:06:22 (2995031): called boinc_finish(0) </stderr_txt> ]]>
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