Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
04:38:14 (3323093): wrapper (7.7.26015): starting
04:38:14 (3323093): wrapper: running run_atlas (--nthreads 1)
[2023-10-17 04:38:14] Arguments: --nthreads 1
[2023-10-17 04:38:14] Threads: 1
[2023-10-17 04:38:14] Checking for CVMFS
[2023-10-17 04:38:15] Probing /cvmfs/atlas.cern.ch... OK
[2023-10-17 04:38:17] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-10-17 04:38:17] Running cvmfs_config stat atlas.cern.ch
[2023-10-17 04:38:17] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-10-17 04:38:17] 2.11.0.0 3323234 0 24800 124855 3 1 3767275 4096000 0 130560 0 0 0.000 960 971 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2023-10-17 04:38:17] CVMFS is ok
[2023-10-17 04:38:17] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2023-10-17 04:38:17] Small home clusters do not require a local http proxy but it is suggested if
[2023-10-17 04:38:17] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2023-10-17 04:38:17] Further information can be found at the LHC@home message board.
[2023-10-17 04:38:17] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-10-17 04:38:17] Checking for apptainer binary...
[2023-10-17 04:38:17] Using apptainer found in PATH at /usr/local/bin/apptainer
[2023-10-17 04:38:17] Running /usr/local/bin/apptainer --version
[2023-10-17 04:38:17] apptainer version 1.2.3+286-g3ac6f0cb6
[2023-10-17 04:38:17] Checking apptainer works with /usr/local/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-10-17 04:38:18] T5810
[2023-10-17 04:38:18] apptainer works
[2023-10-17 04:38:18] Starting ATLAS job with PandaID=5992056608
[2023-10-17 04:38:18] Running command: /usr/local/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/12 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-10-17 05:11:52]  *** The last 200 lines of the pilot log: ***
[2023-10-17 05:11:52] 2023-10-17 11:10:53,247 | INFO     | monitor loop #251: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:10:53,248 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:10:53,848 | INFO     | 1884s have passed since pilot start
[2023-10-17 05:11:52] 2023-10-17 11:10:55,748 | INFO     | monitor loop #252: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:10:55,748 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:10:58,251 | INFO     | monitor loop #253: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:10:58,252 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:00,220 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-10-17 05:11:52] 2023-10-17 11:11:00,752 | INFO     | monitor loop #254: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:00,752 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:01,165 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-10-17 05:11:52] 2023-10-17 11:11:01,165 | INFO     | will try again after 18s..
[2023-10-17 05:11:52] 2023-10-17 11:11:03,255 | INFO     | monitor loop #255: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:03,256 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:05,756 | INFO     | monitor loop #256: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:05,756 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:08,259 | INFO     | monitor loop #257: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:08,260 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:10,760 | INFO     | monitor loop #258: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:10,760 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:13,263 | INFO     | monitor loop #259: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:13,264 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:15,764 | INFO     | monitor loop #260: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:15,764 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:18,267 | INFO     | monitor loop #261: job 0:5992056608 is in state 'stageout'
[2023-10-17 05:11:52] 2023-10-17 11:11:18,268 | WARNING  | aborting job monitor tasks since payload process 3334891 is not running
[2023-10-17 05:11:52] 2023-10-17 11:11:19,252 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-10-17 05:11:52] 2023-10-17 11:11:20,209 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-10-17 05:11:52] 2023-10-17 11:11:20,209 | WARNING  | cache file=/var/lib/boinc-client/slots/12/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/12/ag
[2023-10-17 05:11:52] 2023-10-17 11:11:20,255 | INFO     | transferring file 52f8f124-3119-4a99-becf-6e457757e404_66996.1.job.log.tgz from /var/lib/boinc-client/slots/12/PanDA_Pilot-5992056608/52f8f124-3119-4a99-becf-6e457
[2023-10-17 05:11:52] 2023-10-17 11:11:20,255 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/12/PanDA_Pilot-5992056608/52f8f124-3119-4a99-becf-6e457757e404_66996.1.job.log.tgz /var/lib/boinc-cl
[2023-10-17 05:11:52] 2023-10-17 11:11:20,270 | INFO     | Adding to output.list: 52f8f124-3119-4a99-becf-6e457757e404_66996.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/35/2b/52f8f124-3119-
[2023-10-17 05:11:52] 2023-10-17 11:11:20,271 | INFO     | summary of transferred files:
[2023-10-17 05:11:52] 2023-10-17 11:11:20,271 | INFO     |  -- lfn=52f8f124-3119-4a99-becf-6e457757e404_66996.1.job.log.tgz, status_code=0, status=transferred
[2023-10-17 05:11:52] 2023-10-17 11:11:20,271 | INFO     | stage-out finished correctly
[2023-10-17 05:11:52] 2023-10-17 11:11:20,768 | INFO     | monitor loop #262: job 0:5992056608 is in state 'finished'
[2023-10-17 05:11:52] 2023-10-17 11:11:20,768 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-17 05:11:52] 2023-10-17 11:11:21,075 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-10-17 05:11:52] 2023-10-17 11:11:21,162 | INFO     | job 5992056608 has state=finished
[2023-10-17 05:11:52] 2023-10-17 11:11:21,162 | INFO     | preparing for final server update for job 5992056608 in state='finished'
[2023-10-17 05:11:52] 2023-10-17 11:11:21,163 | INFO     | this job has now completed (state=finished)
[2023-10-17 05:11:52] 2023-10-17 11:11:21,163 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-10-17 05:11:52] 2023-10-17 11:11:21,163 | INFO     | job 5992056608 has finished - writing final server update
[2023-10-17 05:11:52] 2023-10-17 11:11:21,163 | INFO     | total number of processed events: 2 (read)
[2023-10-17 05:11:52] 2023-10-17 11:11:21,185 | INFO     | executing command: lscpu
[2023-10-17 05:11:52] 2023-10-17 11:11:21,205 | INFO     | found 14 cores (14 cores per socket, 1 sockets)
[2023-10-17 05:11:52] 2023-10-17 11:11:21,206 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-10-17 05:11:52] 2023-10-17 11:11:21,238 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-10-17 05:11:52] 2023-10-17 11:11:23,271 | INFO     | monitor loop #263: job 0:5992056608 is in state 'finished'
[2023-10-17 05:11:52] 2023-10-17 11:11:23,272 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-17 05:11:52] 2023-10-17 11:11:25,772 | INFO     | monitor loop #264: job 0:5992056608 is in state 'finished'
[2023-10-17 05:11:52] 2023-10-17 11:11:25,772 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-17 05:11:52] 2023-10-17 11:11:28,275 | INFO     | monitor loop #265: job 0:5992056608 is in state 'finished'
[2023-10-17 05:11:52] 2023-10-17 11:11:28,275 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-17 05:11:52] 2023-10-17 11:11:30,776 | INFO     | monitor loop #266: job 0:5992056608 is in state 'finished'
[2023-10-17 05:11:52] 2023-10-17 11:11:30,776 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-10-17 05:11:52] 2023-10-17 11:11:31,876 | INFO     | CPU arch script returned: x86-64-v3
[2023-10-17 05:11:52] 2023-10-17 11:11:31,876 | INFO     | using path: /var/lib/boinc-client/slots/12/PanDA_Pilot-5992056608/memory_monitor_summary.json (trf name=prmon)
[2023-10-17 05:11:52] 2023-10-17 11:11:31,877 | INFO     | extracted standard info from prmon json
[2023-10-17 05:11:52] 2023-10-17 11:11:31,877 | INFO     | extracted standard memory fields from prmon json
[2023-10-17 05:11:52] 2023-10-17 11:11:31,878 | INFO     | fitting pss+swap vs Time
[2023-10-17 05:11:52] 2023-10-17 11:11:31,879 | INFO     | current memory leak: 1176.43 B/s (using 15 data points, chi2=0.12)
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | ..............................
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . Timing measurements:
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . get job = 60 s
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . initial setup = 50 s
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . payload setup = 13 s
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . stage-in = 69 s
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . payload execution = 1324 s
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . stage-out = 365 s
[2023-10-17 05:11:52] 2023-10-17 11:11:31,880 | INFO     | . log creation = 0 s
[2023-10-17 05:11:52] 2023-10-17 11:11:31,881 | INFO     | ..............................
[2023-10-17 05:11:52] 2023-10-17 11:11:32,116 | INFO     | 
[2023-10-17 05:11:52] 2023-10-17 11:11:32,116 | INFO     | job summary report
[2023-10-17 05:11:52] 2023-10-17 11:11:32,116 | INFO     | --------------------------------------------------
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | PanDA job id: 5992056608
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | task id: NULL
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | errors: (none)
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | status: LOG_TRANSFER = DONE 
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | pilot state: finished 
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | transexitcode: 0
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | exeerrorcode: 0
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | exeerrordiag: 
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | exitcode: 0
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | exitmsg: OK
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | cpuconsumptiontime: 810 s
[2023-10-17 05:11:52] 2023-10-17 11:11:32,117 | INFO     | nevents: 2
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | neventsw: 0
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | pid: 3334891
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | pgrp: 3334891
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | corecount: 1
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | event service: False
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | sizes: {0: 2435924, 1: 2436123, 11: 2436269, 22: 2436297, 33: 2436325, 43: 2436353, 54: 2436509, 65: 2436537, 75: 2436565, 76: 2436653, 86: 2436709, 1341: 2456723,
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | --------------------------------------------------
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | 
[2023-10-17 05:11:52] 2023-10-17 11:11:32,118 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/12
[2023-10-17 05:11:52] 2023-10-17 11:11:32,164 | INFO     | queue jobs had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,164 | INFO     | queue payloads had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,164 | INFO     | queue data_in had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue data_out had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,165 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | queue completed_jobids has 1 job(s)
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | queue messages had 0 job(s) [purged]
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | job 5992056608 has completed (purged errors)
[2023-10-17 05:11:52] 2023-10-17 11:11:32,166 | INFO     | overall cleanup function is called
[2023-10-17 05:11:52] 2023-10-17 11:11:33,172 | INFO     | --- collectZombieJob: --- 10, [3334891]
[2023-10-17 05:11:52] 2023-10-17 11:11:33,172 | INFO     | zombie collector waiting for pid 3334891
[2023-10-17 05:11:52] 2023-10-17 11:11:33,172 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-10-17 05:11:52] 2023-10-17 11:11:34,176 | INFO     | collected zombie processes
[2023-10-17 05:11:52] 2023-10-17 11:11:34,176 | INFO     | will now attempt to kill all subprocesses of pid=3334891
[2023-10-17 05:11:52] 2023-10-17 11:11:34,244 | INFO     | process IDs to be killed: [3334891] (in reverse order)
[2023-10-17 05:11:52] 2023-10-17 11:11:34,286 | WARNING  | found no corresponding commands to process id(s)
[2023-10-17 05:11:52] 2023-10-17 11:11:34,286 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-10-17 05:11:52] 2023-10-17 11:11:34,293 | INFO     | did not find any defunct processes belonging to 3334891
[2023-10-17 05:11:52] 2023-10-17 11:11:34,296 | INFO     | did not find any defunct processes belonging to 3334891
[2023-10-17 05:11:52] 2023-10-17 11:11:34,297 | INFO     | ready for new job
[2023-10-17 05:11:52] 2023-10-17 11:11:34,297 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-10-17 05:11:52] 2023-10-17 11:11:34,298 | INFO     | **************************************
[2023-10-17 05:11:52] 2023-10-17 11:11:34,298 | INFO     | ***  PanDA Pilot version 3.6.9.10  ***
[2023-10-17 05:11:52] 2023-10-17 11:11:34,298 | INFO     | **************************************
[2023-10-17 05:11:52] 2023-10-17 11:11:34,298 | INFO     | 
[2023-10-17 05:11:52] 2023-10-17 11:11:34,317 | INFO     | architecture information:
[2023-10-17 05:11:52] 2023-10-17 11:11:34,324 | INFO     | executing command: cat /etc/os-release
[2023-10-17 05:11:52] 2023-10-17 11:11:34,334 | INFO     | cat /etc/os-release:
[2023-10-17 05:11:52] NAME="CentOS Linux"
[2023-10-17 05:11:52] VERSION="7 (Core)"
[2023-10-17 05:11:52] ID="centos"
[2023-10-17 05:11:52] ID_LIKE="rhel fedora"
[2023-10-17 05:11:52] VERSION_ID="7"
[2023-10-17 05:11:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-10-17 05:11:52] ANSI_COLOR="0;31"
[2023-10-17 05:11:52] CPE_NAME="cpe:/o:centos:centos:7"
[2023-10-17 05:11:52] HOME_URL="https://www.centos.org/"
[2023-10-17 05:11:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-10-17 05:11:52] 
[2023-10-17 05:11:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-10-17 05:11:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-10-17 05:11:52] REDHAT_SUPPORT_PRODUCT="centos"
[2023-10-17 05:11:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-10-17 05:11:52] 
[2023-10-17 05:11:52] 2023-10-17 11:11:34,335 | INFO     | **************************************
[2023-10-17 05:11:52] 2023-10-17 11:11:34,836 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/12
[2023-10-17 05:11:52] 2023-10-17 11:11:34,848 | INFO     | sufficient remaining disk space (208715907072 B)
[2023-10-17 05:11:52] 2023-10-17 11:11:34,848 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-10-17 05:11:52] 2023-10-17 11:11:34,848 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-10-17 05:11:52] 2023-10-17 11:11:34,849 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-10-17 05:11:52] 2023-10-17 11:11:34,849 | INFO     | aborting loop
[2023-10-17 05:11:52] 2023-10-17 11:11:34,936 | INFO     | found 0 job(s) in 20 queues
[2023-10-17 05:11:52] 2023-10-17 11:11:34,936 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-10-17 05:11:52] 2023-10-17 11:11:34,937 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-10-17 05:11:52] 2023-10-17 11:11:35,852 | INFO     | [job] retrieve thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:35,853 | INFO     | [job] job monitor thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:35,872 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-10-17 05:11:52] 2023-10-17 11:11:35,948 | INFO     | [data] copytool_in thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:35,977 | INFO     | [data] control thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,000 | INFO     | [payload] control thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,164 | INFO     | [job] validate thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,171 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-10-17 05:11:52] 2023-10-17 11:11:36,252 | INFO     | [payload] failed_post thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,332 | INFO     | [job] create_data_payload thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,444 | INFO     | [payload] execute_payloads thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,784 | INFO     | [job] control thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,872 | INFO     | [payload] validate_post thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,924 | INFO     | [payload] validate_pre thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:36,976 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-10-17 05:11:52] 2023-10-17 11:11:37,876 | INFO     | [data] copytool_out thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:37,981 | INFO     | [job] queue monitor thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:40,176 | INFO     | [data] queue_monitor thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:45,052 | INFO     | job.realtimelogging is not enabled
[2023-10-17 05:11:52] 2023-10-17 11:11:46,056 | INFO     | [payload] run_realtimelog thread has finished
[2023-10-17 05:11:52] 2023-10-17 11:11:47,000 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139635840481088)>', '<ExcThread(monitor, started 139635283977984)>']
[2023-10-17 05:11:52] 2023-10-17 11:11:47,988 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-10-17 05:11:52] 2023-10-17 11:11:47,988 | INFO     | [monitor] control thread has ended
[2023-10-17 05:11:52] 2023-10-17 11:11:52,024 | INFO     | end of generic workflow (traces error code: 0)
[2023-10-17 05:11:52] 2023-10-17 11:11:52,025 | INFO     | traces error code: 0
[2023-10-17 05:11:52] 2023-10-17 11:11:52,025 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-10-17 05:11:52] 2023-10-17 11:11:52,077 [wrapper] ==== pilot stdout END ====
[2023-10-17 05:11:52] 2023-10-17 11:11:52,079 [wrapper] ==== wrapper stdout RESUME ====
[2023-10-17 05:11:52] 2023-10-17 11:11:52,081 [wrapper] pilotpid: 3327449
[2023-10-17 05:11:52] 2023-10-17 11:11:52,086 [wrapper] Pilot exit status: 0
[2023-10-17 05:11:52] 2023-10-17 11:11:52,104 [wrapper] pandaids: 5992056608
[2023-10-17 05:11:52] 2023-10-17 11:11:52,109 [wrapper] apfmon messages muted
[2023-10-17 05:11:52] 2023-10-17 11:11:52,111 [wrapper] Test setup, not cleaning
[2023-10-17 05:11:52] 2023-10-17 11:11:52,117 [wrapper] ==== wrapper stdout END ====
[2023-10-17 05:11:52] 2023-10-17 11:11:52,121 [wrapper] ==== wrapper stderr END ====
[2023-10-17 05:11:52] 2023-10-17 11:11:52,129 [wrapper] wrapperexiting ec=0, duration=2013
[2023-10-17 05:11:52] 2023-10-17 11:11:52,131 [wrapper] apfmon messages muted
[2023-10-17 05:11:52]  *** Error codes and diagnostics ***
[2023-10-17 05:11:52]     "exeErrorCode": 0,
[2023-10-17 05:11:52]     "exeErrorDiag": "",
[2023-10-17 05:11:52]     "pilotErrorCode": 0,
[2023-10-17 05:11:52]     "pilotErrorDiag": "",
[2023-10-17 05:11:52]  *** Listing of results directory ***
[2023-10-17 05:11:52] total 45072
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc   433413 Oct 17 04:25 pilot3.tar.gz
[2023-10-17 05:11:52] -rwx------ 1 boinc boinc    27439 Oct 17 04:32 runpilot2-wrapper.sh
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc     4388 Oct 17 04:32 queuedata.json
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc      107 Oct 17 04:38 wrapper_26015_x86_64-pc-linux-gnu
[2023-10-17 05:11:52] -rwxr-xr-x 1 boinc boinc     7986 Oct 17 04:38 run_atlas
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc      112 Oct 17 04:38 job.xml
[2023-10-17 05:11:52] -rw-r--r-- 2 boinc boinc    17604 Oct 17 04:38 start_atlas.sh
[2023-10-17 05:11:52] drwxrwx--x 2 boinc boinc     4096 Oct 17 04:38 shared
[2023-10-17 05:11:52] -rw-r--r-- 2 boinc boinc   444669 Oct 17 04:38 input.tar.gz
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc     9119 Oct 17 04:38 init_data.xml
[2023-10-17 05:11:52] -rw-r--r-- 2 boinc boinc 38288972 Oct 17 04:38 EVNT.04972714._000032.pool.root.1
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc        0 Oct 17 04:38 boinc_lockfile
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc     2757 Oct 17 04:38 pandaJob.out
[2023-10-17 05:11:52] -rw------- 1 boinc boinc      424 Oct 17 04:38 setup.sh.local
[2023-10-17 05:11:52] -rw------- 1 boinc boinc   994126 Oct 17 04:39 agis_schedconf.cvmfs.json
[2023-10-17 05:11:52] -rw------- 1 boinc boinc  1361563 Oct 17 04:40 cric_ddmendpoints.json
[2023-10-17 05:11:52] drwx------ 4 boinc boinc     4096 Oct 17 04:41 pilot3
[2023-10-17 05:11:52] -rw------- 1 boinc boinc  1820566 Oct 17 05:05 output.1.52f8f124-3119-4a99-becf-6e457757e404_66996.pool.root
[2023-10-17 05:11:52] -rw------- 1 boinc boinc     1023 Oct 17 05:05 memory_monitor_summary.json
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc      533 Oct 17 05:05 boinc_task_state.xml
[2023-10-17 05:11:52] -rw------- 1 boinc boinc   160908 Oct 17 05:08 52f8f124-3119-4a99-becf-6e457757e404_66996.1.job.log.tgz
[2023-10-17 05:11:52] -rw------- 1 boinc boinc     6638 Oct 17 05:11 heartbeat.json
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc       25 Oct 17 05:11 wrapper_checkpoint.txt
[2023-10-17 05:11:52] -rw------- 1 boinc boinc     3982 Oct 17 05:11 pilotlog.txt
[2023-10-17 05:11:52] -rw------- 1 boinc boinc   221348 Oct 17 05:11 52f8f124-3119-4a99-becf-6e457757e404_66996.1.job.log
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc     8192 Oct 17 05:11 boinc_mmap_file
[2023-10-17 05:11:52] -rw------- 1 boinc boinc      464 Oct 17 05:11 output.list
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc      748 Oct 17 05:11 runtime_log
[2023-10-17 05:11:52] -rw------- 1 boinc boinc  2222080 Oct 17 05:11 result.tar.gz
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc    11958 Oct 17 05:11 runtime_log.err
[2023-10-17 05:11:52] -rw------- 1 boinc boinc      631 Oct 17 05:11 86INDmoYwC4n7Olcko1bjSoqABFKDmABFKDm7AsVDmsCTKDmFsvKhn.diag
[2023-10-17 05:11:52] -rw-r--r-- 1 boinc boinc    23193 Oct 17 05:11 stderr.txt
[2023-10-17 05:11:52] HITS file was successfully produced:
[2023-10-17 05:11:52] -rw------- 1 boinc boinc 1820566 Oct 17 05:05 shared/HITS.pool.root.1
[2023-10-17 05:11:52]  *** Contents of shared directory: ***
[2023-10-17 05:11:52] total 41800
[2023-10-17 05:11:52] -rw-r--r-- 2 boinc boinc    17604 Oct 17 04:38 start_atlas.sh
[2023-10-17 05:11:52] -rw-r--r-- 2 boinc boinc   444669 Oct 17 04:38 input.tar.gz
[2023-10-17 05:11:52] -rw-r--r-- 2 boinc boinc 38288972 Oct 17 04:38 ATLAS.root_0
[2023-10-17 05:11:52] -rw------- 1 boinc boinc  1820566 Oct 17 05:05 HITS.pool.root.1
[2023-10-17 05:11:52] -rw------- 1 boinc boinc  2222080 Oct 17 05:11 result.tar.gz
05:11:53 (3323093): run_atlas exited; CPU time 811.716797
05:11:53 (3323093): called boinc_finish(0)

</stderr_txt>
]]>

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