Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
00:12:10 (11687): wrapper (7.7.26015): starting
00:12:10 (11687): wrapper: running run_atlas (--nthreads 1)
[2023-11-07 00:12:10] Arguments: --nthreads 1
[2023-11-07 00:12:10] Threads: 1
[2023-11-07 00:12:10] Checking for CVMFS
[2023-11-07 00:12:13] Probing /cvmfs/atlas.cern.ch... OK
[2023-11-07 00:12:15] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-11-07 00:12:15] Running cvmfs_config stat atlas.cern.ch
[2023-11-07 00:12:16] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-11-07 00:12:16] 2.6.3.0 11932 0 26312 125662 3 1 2652735 2816001 0 65024 0 0 n/a 961 959 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-11-07 00:12:16] CVMFS is ok
[2023-11-07 00:12:16] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-11-07 00:12:16] Checking for apptainer binary...
[2023-11-07 00:12:16] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-11-07 00:12:16] apptainer is not installed, using version from CVMFS
[2023-11-07 00:12:16] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-11-07 00:12:17] HPi7COS7
[2023-11-07 00:12:17] apptainer works
[2023-11-07 00:12:17] Starting ATLAS job with PandaID=6012551734
[2023-11-07 00:12:17] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-11-07 00:49:39]  *** The last 200 lines of the pilot log: ***
[2023-11-07 00:49:39] 2023-11-06 23:48:39,365 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-11-07 00:49:39] 2023-11-06 23:48:39,449 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-11-07 00:49:39] 2023-11-06 23:48:39,450 | INFO     | will try again after 18s..
[2023-11-07 00:49:39] 2023-11-06 23:48:39,509 | INFO     | monitor loop #258: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:39,510 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:42,034 | INFO     | monitor loop #259: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:42,034 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:44,544 | INFO     | monitor loop #260: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:44,545 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:47,063 | INFO     | monitor loop #261: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:47,063 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:49,572 | INFO     | monitor loop #262: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:49,573 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:52,097 | INFO     | monitor loop #263: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:52,097 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:54,621 | INFO     | monitor loop #264: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:54,622 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:57,134 | INFO     | monitor loop #265: job 0:6012551734 is in state 'stageout'
[2023-11-07 00:49:39] 2023-11-06 23:48:57,135 | WARNING  | aborting job monitor tasks since payload process 22859 is not running
[2023-11-07 00:49:39] 2023-11-06 23:48:57,511 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-11-07 00:49:39] 2023-11-06 23:48:57,623 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-11-07 00:49:39] 2023-11-06 23:48:57,623 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2023-11-07 00:49:39] 2023-11-06 23:48:57,736 | INFO     | transferring file f637ea03-d558-4a8a-b283-213e9422e85b_26758.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-6012551734/f637ea03-d558-4a8a-b283-213e9422e85b_
[2023-11-07 00:49:39] 2023-11-06 23:48:57,737 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6012551734/f637ea03-d558-4a8a-b283-213e9422e85b_26758.1.job.log.tgz /var/lib/boinc/slots/0/f6
[2023-11-07 00:49:39] 2023-11-06 23:48:57,795 | INFO     | Adding to output.list: f637ea03-d558-4a8a-b283-213e9422e85b_26758.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/26/15/f637ea03-d558-
[2023-11-07 00:49:39] 2023-11-06 23:48:57,796 | INFO     | summary of transferred files:
[2023-11-07 00:49:39] 2023-11-06 23:48:57,797 | INFO     |  -- lfn=f637ea03-d558-4a8a-b283-213e9422e85b_26758.1.job.log.tgz, status_code=0, status=transferred
[2023-11-07 00:49:39] 2023-11-06 23:48:57,797 | INFO     | stage-out finished correctly
[2023-11-07 00:49:39] 2023-11-06 23:48:59,124 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-11-07 00:49:39] 2023-11-06 23:48:59,380 | INFO     | job 6012551734 has state=finished
[2023-11-07 00:49:39] 2023-11-06 23:48:59,381 | INFO     | preparing for final server update for job 6012551734 in state='finished'
[2023-11-07 00:49:39] 2023-11-06 23:48:59,381 | INFO     | this job has now completed (state=finished)
[2023-11-07 00:49:39] 2023-11-06 23:48:59,381 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-11-07 00:49:39] 2023-11-06 23:48:59,381 | INFO     | job 6012551734 has finished - writing final server update
[2023-11-07 00:49:39] 2023-11-06 23:48:59,382 | INFO     | total number of processed events: 2 (read)
[2023-11-07 00:49:39] 2023-11-06 23:48:59,386 | INFO     | executing command: lscpu
[2023-11-07 00:49:39] 2023-11-06 23:48:59,449 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-11-07 00:49:39] 2023-11-06 23:48:59,450 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-11-07 00:49:39] 2023-11-06 23:48:59,564 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-11-07 00:49:39] 2023-11-06 23:48:59,662 | INFO     | monitor loop #266: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:48:59,664 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:02,173 | INFO     | monitor loop #267: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:49:02,173 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:04,678 | INFO     | monitor loop #268: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:49:04,678 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:07,185 | INFO     | monitor loop #269: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:49:07,189 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:09,709 | INFO     | monitor loop #270: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:49:09,710 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:12,216 | INFO     | monitor loop #271: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:49:12,217 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:14,728 | INFO     | monitor loop #272: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:49:14,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:17,242 | INFO     | monitor loop #273: job 0:6012551734 is in state 'finished'
[2023-11-07 00:49:39] 2023-11-06 23:49:17,244 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-07 00:49:39] 2023-11-06 23:49:17,766 | INFO     | CPU arch script returned: x86-64-v2
[2023-11-07 00:49:39] 2023-11-06 23:49:17,766 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6012551734/memory_monitor_summary.json (trf name=prmon)
[2023-11-07 00:49:39] 2023-11-06 23:49:17,767 | INFO     | extracted standard info from prmon json
[2023-11-07 00:49:39] 2023-11-06 23:49:17,767 | INFO     | extracted standard memory fields from prmon json
[2023-11-07 00:49:39] 2023-11-06 23:49:17,769 | INFO     | fitting pss+swap vs Time
[2023-11-07 00:49:39] 2023-11-06 23:49:17,769 | INFO     | current memory leak: 384.62 B/s (using 20 data points, chi2=0.19)
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | ..............................
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . Timing measurements:
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . get job = 49 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . initial setup = 48 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . payload setup = 28 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . stage-in = 59 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . payload execution = 1610 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . stage-out = 331 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | . log creation = 0 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,770 | INFO     | ..............................
[2023-11-07 00:49:39] 2023-11-06 23:49:17,942 | INFO     | 
[2023-11-07 00:49:39] 2023-11-06 23:49:17,942 | INFO     | job summary report
[2023-11-07 00:49:39] 2023-11-06 23:49:17,942 | INFO     | --------------------------------------------------
[2023-11-07 00:49:39] 2023-11-06 23:49:17,942 | INFO     | PanDA job id: 6012551734
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | task id: NULL
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | errors: (none)
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | status: LOG_TRANSFER = DONE 
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | pilot state: finished 
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | transexitcode: 0
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | exeerrorcode: 0
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | exeerrordiag: 
[2023-11-07 00:49:39] 2023-11-06 23:49:17,943 | INFO     | exitcode: 0
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | exitmsg: OK
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | cpuconsumptiontime: 1423 s
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | nevents: 2
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | neventsw: 0
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | pid: 22859
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | pgrp: 22859
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | corecount: 1
[2023-11-07 00:49:39] 2023-11-06 23:49:17,944 | INFO     | event service: False
[2023-11-07 00:49:39] 2023-11-06 23:49:17,945 | INFO     | sizes: {0: 2430988, 1: 2431187, 2: 2431187, 12: 2431215, 23: 2431389, 34: 2431417, 45: 2431573, 56: 2431601, 66: 2431629, 75: 2431717, 77: 2431745, 1643: 2452044, 
[2023-11-07 00:49:39] 2023-11-06 23:49:17,945 | INFO     | --------------------------------------------------
[2023-11-07 00:49:39] 2023-11-06 23:49:17,945 | INFO     | 
[2023-11-07 00:49:39] 2023-11-06 23:49:17,945 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2023-11-07 00:49:39] 2023-11-06 23:49:18,010 | INFO     | queue jobs had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,010 | INFO     | queue payloads had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,011 | INFO     | queue data_in had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,011 | INFO     | queue data_out had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,011 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,011 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,011 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,011 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,012 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,012 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,012 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,012 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,012 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,012 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,012 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,013 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,013 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,013 | INFO     | queue completed_jobids has 1 job(s)
[2023-11-07 00:49:39] 2023-11-06 23:49:18,013 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,013 | INFO     | queue messages had 0 job(s) [purged]
[2023-11-07 00:49:39] 2023-11-06 23:49:18,014 | INFO     | job 6012551734 has completed (purged errors)
[2023-11-07 00:49:39] 2023-11-06 23:49:18,014 | INFO     | overall cleanup function is called
[2023-11-07 00:49:39] 2023-11-06 23:49:19,035 | INFO     | --- collectZombieJob: --- 10, [22859]
[2023-11-07 00:49:39] 2023-11-06 23:49:19,041 | INFO     | zombie collector waiting for pid 22859
[2023-11-07 00:49:39] 2023-11-06 23:49:19,041 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-11-07 00:49:39] 2023-11-06 23:49:20,051 | INFO     | collected zombie processes
[2023-11-07 00:49:39] 2023-11-06 23:49:20,052 | INFO     | will now attempt to kill all subprocesses of pid=22859
[2023-11-07 00:49:39] 2023-11-06 23:49:20,172 | INFO     | process IDs to be killed: [22859] (in reverse order)
[2023-11-07 00:49:39] 2023-11-06 23:49:20,280 | WARNING  | found no corresponding commands to process id(s)
[2023-11-07 00:49:39] 2023-11-06 23:49:20,280 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-11-07 00:49:39] 2023-11-06 23:49:20,283 | INFO     | did not find any defunct processes belonging to 22859
[2023-11-07 00:49:39] 2023-11-06 23:49:20,286 | INFO     | did not find any defunct processes belonging to 22859
[2023-11-07 00:49:39] 2023-11-06 23:49:20,287 | INFO     | ready for new job
[2023-11-07 00:49:39] 2023-11-06 23:49:20,287 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-11-07 00:49:39] 2023-11-06 23:49:20,290 | INFO     | **************************************
[2023-11-07 00:49:39] 2023-11-06 23:49:20,290 | INFO     | ***  PanDA Pilot version 3.6.9.10  ***
[2023-11-07 00:49:39] 2023-11-06 23:49:20,290 | INFO     | **************************************
[2023-11-07 00:49:39] 2023-11-06 23:49:20,290 | INFO     | 
[2023-11-07 00:49:39] 2023-11-06 23:49:20,291 | INFO     | pilot is running in a VM
[2023-11-07 00:49:39] 2023-11-06 23:49:20,291 | INFO     | architecture information:
[2023-11-07 00:49:39] 2023-11-06 23:49:20,292 | INFO     | executing command: cat /etc/os-release
[2023-11-07 00:49:39] 2023-11-06 23:49:20,318 | INFO     | cat /etc/os-release:
[2023-11-07 00:49:39] NAME="CentOS Linux"
[2023-11-07 00:49:39] VERSION="7 (Core)"
[2023-11-07 00:49:39] ID="centos"
[2023-11-07 00:49:39] ID_LIKE="rhel fedora"
[2023-11-07 00:49:39] VERSION_ID="7"
[2023-11-07 00:49:39] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-11-07 00:49:39] ANSI_COLOR="0;31"
[2023-11-07 00:49:39] CPE_NAME="cpe:/o:centos:centos:7"
[2023-11-07 00:49:39] HOME_URL="https://www.centos.org/"
[2023-11-07 00:49:39] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-11-07 00:49:39] 
[2023-11-07 00:49:39] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-11-07 00:49:39] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-11-07 00:49:39] REDHAT_SUPPORT_PRODUCT="centos"
[2023-11-07 00:49:39] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-11-07 00:49:39] 
[2023-11-07 00:49:39] 2023-11-06 23:49:20,319 | INFO     | **************************************
[2023-11-07 00:49:39] 2023-11-06 23:49:20,825 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-11-07 00:49:39] 2023-11-06 23:49:20,912 | INFO     | sufficient remaining disk space (10515120128 B)
[2023-11-07 00:49:39] 2023-11-06 23:49:20,913 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-11-07 00:49:39] 2023-11-06 23:49:20,913 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-11-07 00:49:39] 2023-11-06 23:49:20,913 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-11-07 00:49:39] 2023-11-06 23:49:20,913 | INFO     | aborting loop
[2023-11-07 00:49:39] 2023-11-06 23:49:21,075 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-11-07 00:49:39] 2023-11-06 23:49:21,683 | INFO     | found 0 job(s) in 20 queues
[2023-11-07 00:49:39] 2023-11-06 23:49:21,684 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-11-07 00:49:39] 2023-11-06 23:49:21,684 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-11-07 00:49:39] 2023-11-06 23:49:21,914 | INFO     | [job] retrieve thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:21,919 | INFO     | [job] job monitor thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,027 | INFO     | [payload] execute_payloads thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,126 | INFO     | [payload] failed_post thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,631 | INFO     | [payload] validate_post thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,873 | INFO     | [data] control thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,896 | INFO     | [job] create_data_payload thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,912 | INFO     | [payload] control thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,929 | INFO     | [job] validate thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,931 | INFO     | [data] copytool_in thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,932 | INFO     | [payload] validate_pre thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:22,960 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-11-07 00:49:39] 2023-11-06 23:49:23,096 | INFO     | [data] copytool_out thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:23,418 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-11-07 00:49:39] 2023-11-06 23:49:23,523 | INFO     | [job] control thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:23,968 | INFO     | [job] queue monitor thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:27,456 | INFO     | [data] queue_monitor thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:31,443 | INFO     | job.realtimelogging is not enabled
[2023-11-07 00:49:39] 2023-11-06 23:49:32,452 | INFO     | [payload] run_realtimelog thread has finished
[2023-11-07 00:49:39] 2023-11-06 23:49:33,181 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140500417787712)>', '<ExcThread(monitor, started 140500215768832)>']
[2023-11-07 00:49:39] 2023-11-06 23:49:33,773 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-11-07 00:49:39] 2023-11-06 23:49:33,773 | INFO     | [monitor] control thread has ended
[2023-11-07 00:49:39] 2023-11-06 23:49:38,217 | INFO     | end of generic workflow (traces error code: 0)
[2023-11-07 00:49:39] 2023-11-06 23:49:38,217 | INFO     | traces error code: 0
[2023-11-07 00:49:39] 2023-11-06 23:49:38,217 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-11-07 00:49:39] 2023-11-06 23:49:38,362 [wrapper] ==== pilot stdout END ====
[2023-11-07 00:49:39] 2023-11-06 23:49:38,367 [wrapper] ==== wrapper stdout RESUME ====
[2023-11-07 00:49:39] 2023-11-06 23:49:38,383 [wrapper] pilotpid: 15933
[2023-11-07 00:49:39] 2023-11-06 23:49:38,389 [wrapper] Pilot exit status: 0
[2023-11-07 00:49:39] 2023-11-06 23:49:38,457 [wrapper] pandaids: 6012551734
[2023-11-07 00:49:39] 2023-11-06 23:49:38,491 [wrapper] apfmon messages muted
[2023-11-07 00:49:39] 2023-11-06 23:49:38,500 [wrapper] Test setup, not cleaning
[2023-11-07 00:49:39] 2023-11-06 23:49:38,531 [wrapper] ==== wrapper stdout END ====
[2023-11-07 00:49:39] 2023-11-06 23:49:38,590 [wrapper] ==== wrapper stderr END ====
[2023-11-07 00:49:39] 2023-11-06 23:49:38,609 [wrapper] wrapperexiting ec=0, duration=2240
[2023-11-07 00:49:39] 2023-11-06 23:49:38,622 [wrapper] apfmon messages muted
[2023-11-07 00:49:39]  *** Error codes and diagnostics ***
[2023-11-07 00:49:39]     "exeErrorCode": 0,
[2023-11-07 00:49:39]     "exeErrorDiag": "",
[2023-11-07 00:49:39]     "pilotErrorCode": 0,
[2023-11-07 00:49:39]     "pilotErrorDiag": "",
[2023-11-07 00:49:39]  *** Listing of results directory ***
[2023-11-07 00:49:39] insgesamt 44700
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc   433413  6. Nov 21:17 pilot3.tar.gz
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc     4388  6. Nov 22:05 queuedata.json
[2023-11-07 00:49:39] -rwx------. 1 boinc boinc    27439  6. Nov 22:07 runpilot2-wrapper.sh
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc      107  7. Nov 00:12 wrapper_26015_x86_64-pc-linux-gnu
[2023-11-07 00:49:39] -rwxr-xr-x. 1 boinc boinc     7986  7. Nov 00:12 run_atlas
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc      112  7. Nov 00:12 job.xml
[2023-11-07 00:49:39] -rw-r--r--. 2 boinc boinc    17618  7. Nov 00:12 start_atlas.sh
[2023-11-07 00:49:39] drwxrwx--x. 2 boinc boinc       68  7. Nov 00:12 shared
[2023-11-07 00:49:39] -rw-r--r--. 2 boinc boinc   444669  7. Nov 00:12 input.tar.gz
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc     6047  7. Nov 00:12 init_data.xml
[2023-11-07 00:49:39] -rw-r--r--. 2 boinc boinc 38019645  7. Nov 00:12 EVNT.04972714._000023.pool.root.1
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc        0  7. Nov 00:12 boinc_lockfile
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc     2757  7. Nov 00:12 pandaJob.out
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc      424  7. Nov 00:12 setup.sh.local
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc   975447  7. Nov 00:12 agis_schedconf.cvmfs.json
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc  1359824  7. Nov 00:13 cric_ddmendpoints.json
[2023-11-07 00:49:39] drwx------. 4 boinc boinc     4096  7. Nov 00:14 pilot3
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc  1769776  7. Nov 00:43 output.1.f637ea03-d558-4a8a-b283-213e9422e85b_26758.pool.root
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc     1020  7. Nov 00:43 memory_monitor_summary.json
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc      534  7. Nov 00:43 boinc_task_state.xml
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc   166761  7. Nov 00:46 f637ea03-d558-4a8a-b283-213e9422e85b_26758.1.job.log.tgz
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc     6714  7. Nov 00:49 heartbeat.json
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc     8192  7. Nov 00:49 boinc_mmap_file
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc       26  7. Nov 00:49 wrapper_checkpoint.txt
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc     4035  7. Nov 00:49 pilotlog.txt
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc   228211  7. Nov 00:49 f637ea03-d558-4a8a-b283-213e9422e85b_26758.1.job.log
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc      464  7. Nov 00:49 output.list
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc      748  7. Nov 00:49 runtime_log
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc  2181120  7. Nov 00:49 result.tar.gz
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc    11856  7. Nov 00:49 runtime_log.err
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc      635  7. Nov 00:49 0zGODm5zLK4n7Olcko1bjSoqABFKDmABFKDmyeZQDmonFKDmhmzCRm.diag
[2023-11-07 00:49:39] -rw-r--r--. 1 boinc boinc    22836  7. Nov 00:49 stderr.txt
[2023-11-07 00:49:39] HITS file was successfully produced:
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc 1769776  7. Nov 00:43 shared/HITS.pool.root.1
[2023-11-07 00:49:39]  *** Contents of shared directory: ***
[2023-11-07 00:49:39] insgesamt 41452
[2023-11-07 00:49:39] -rw-r--r--. 2 boinc boinc    17618  7. Nov 00:12 start_atlas.sh
[2023-11-07 00:49:39] -rw-r--r--. 2 boinc boinc   444669  7. Nov 00:12 input.tar.gz
[2023-11-07 00:49:39] -rw-r--r--. 2 boinc boinc 38019645  7. Nov 00:12 ATLAS.root_0
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc  1769776  7. Nov 00:43 HITS.pool.root.1
[2023-11-07 00:49:39] -rw-------. 1 boinc boinc  2181120  7. Nov 00:49 result.tar.gz
00:49:40 (11687): run_atlas exited; CPU time 1364.969485
00:49:40 (11687): called boinc_finish(0)

</stderr_txt>
]]>

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