Stderr output

<core_client_version>7.4.25</core_client_version>
<![CDATA[
<stderr_txt>
00:26:44 (3054): wrapper (7.7.26015): starting
00:26:44 (3054): wrapper: running run_atlas (--nthreads 4)
[2023-11-28 00:26:44] Arguments: --nthreads 4
[2023-11-28 00:26:44] Threads: 4
[2023-11-28 00:26:44] Checking for CVMFS
[2023-11-28 00:26:48] Probing /cvmfs/atlas.cern.ch... OK
[2023-11-28 00:26:53] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-11-28 00:26:53] Running cvmfs_config stat atlas.cern.ch
[2023-11-28 00:26:54] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-11-28 00:26:54] 2.9.0.0 3276 0 22808 126386 3 1 3363285 4194304 0 130560 0 0 0.000 961 671 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://192.168.100.152:3128 1
[2023-11-28 00:26:54] CVMFS is ok
[2023-11-28 00:26:54] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-11-28 00:26:54] Checking for apptainer binary...
[2023-11-28 00:26:54] Using apptainer found in PATH at /usr/bin/apptainer
[2023-11-28 00:26:54] Running /usr/bin/apptainer --version
[2023-11-28 00:26:54] apptainer version 1.0.3
[2023-11-28 00:26:54] Checking apptainer works with /usr/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-11-28 00:26:55] TeeC16
[2023-11-28 00:26:55] apptainer works
[2023-11-28 00:26:55] Set ATHENA_PROC_NUMBER=4
[2023-11-28 00:26:55] Set ATHENA_CORE_NUMBER=4
[2023-11-28 00:26:55] Starting ATLAS job with PandaID=6035045505
[2023-11-28 00:26:55] Running command: /usr/bin/apptainer exec -B /cvmfs,/home/m/BOINC/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-11-28 00:49:49]  *** The last 200 lines of the pilot log: ***
[2023-11-28 00:49:49] 2023-11-28 00:48:50,479 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-11-28 00:49:49] 2023-11-28 00:48:50,618 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-11-28 00:49:49] 2023-11-28 00:48:50,618 | INFO     | will try again after 25s..
[2023-11-28 00:49:49] 2023-11-28 00:48:50,702 | INFO     | monitor loop #203: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:48:50,703 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:48:53,206 | INFO     | monitor loop #204: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:48:53,206 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:48:55,709 | INFO     | monitor loop #205: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:48:55,710 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:48:58,213 | INFO     | monitor loop #206: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:48:58,213 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:00,716 | INFO     | monitor loop #207: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:49:00,717 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:03,220 | INFO     | monitor loop #208: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:49:03,220 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:05,723 | INFO     | monitor loop #209: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:49:05,724 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:08,227 | INFO     | monitor loop #210: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:49:08,227 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:10,730 | INFO     | monitor loop #211: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:49:10,731 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:13,234 | INFO     | monitor loop #212: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:49:13,234 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:15,679 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-11-28 00:49:49] 2023-11-28 00:49:15,737 | INFO     | monitor loop #213: job 0:6035045505 is in state 'stageout'
[2023-11-28 00:49:49] 2023-11-28 00:49:15,738 | WARNING  | aborting job monitor tasks since payload process 14388 is not running
[2023-11-28 00:49:49] 2023-11-28 00:49:15,861 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-11-28 00:49:49] 2023-11-28 00:49:15,862 | WARNING  | cache file=/home/m/BOINC/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/home/m/BOINC/slots/0/agis_ddmendpoints.ag
[2023-11-28 00:49:49] 2023-11-28 00:49:15,907 | INFO     | transferring file a0e82708-ec18-4f41-8ac8-94a9eec32943_86181.1.job.log.tgz from /home/m/BOINC/slots/0/PanDA_Pilot-6035045505/a0e82708-ec18-4f41-8ac8-94a9eec32943_8
[2023-11-28 00:49:49] 2023-11-28 00:49:15,907 | INFO     | executing command: /usr/bin/env mv /home/m/BOINC/slots/0/PanDA_Pilot-6035045505/a0e82708-ec18-4f41-8ac8-94a9eec32943_86181.1.job.log.tgz /home/m/BOINC/slots/0/a0e8
[2023-11-28 00:49:49] 2023-11-28 00:49:15,930 | INFO     | Adding to output.list: a0e82708-ec18-4f41-8ac8-94a9eec32943_86181.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/57/cd/a0e82708-ec18-
[2023-11-28 00:49:49] 2023-11-28 00:49:15,931 | INFO     | summary of transferred files:
[2023-11-28 00:49:49] 2023-11-28 00:49:15,931 | INFO     |  -- lfn=a0e82708-ec18-4f41-8ac8-94a9eec32943_86181.1.job.log.tgz, status_code=0, status=transferred
[2023-11-28 00:49:49] 2023-11-28 00:49:15,931 | INFO     | stage-out finished correctly
[2023-11-28 00:49:49] 2023-11-28 00:49:16,425 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-11-28 00:49:49] 2023-11-28 00:49:18,241 | INFO     | monitor loop #214: job 0:6035045505 is in state 'finished'
[2023-11-28 00:49:49] 2023-11-28 00:49:18,241 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-28 00:49:49] 2023-11-28 00:49:19,185 | INFO     | job 6035045505 has state=finished
[2023-11-28 00:49:49] 2023-11-28 00:49:19,185 | INFO     | preparing for final server update for job 6035045505 in state='finished'
[2023-11-28 00:49:49] 2023-11-28 00:49:19,186 | INFO     | this job has now completed (state=finished)
[2023-11-28 00:49:49] 2023-11-28 00:49:19,186 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-11-28 00:49:49] 2023-11-28 00:49:19,186 | INFO     | job 6035045505 has finished - writing final server update
[2023-11-28 00:49:49] 2023-11-28 00:49:19,186 | INFO     | total number of processed events: 2 (read)
[2023-11-28 00:49:49] 2023-11-28 00:49:19,205 | INFO     | executing command: lscpu
[2023-11-28 00:49:49] 2023-11-28 00:49:19,225 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-11-28 00:49:49] 2023-11-28 00:49:19,225 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-11-28 00:49:49] 2023-11-28 00:49:19,250 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-11-28 00:49:49] 2023-11-28 00:49:20,744 | INFO     | monitor loop #215: job 0:6035045505 is in state 'finished'
[2023-11-28 00:49:49] 2023-11-28 00:49:20,747 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-28 00:49:49] 2023-11-28 00:49:23,249 | INFO     | monitor loop #216: job 0:6035045505 is in state 'finished'
[2023-11-28 00:49:49] 2023-11-28 00:49:23,249 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-28 00:49:49] 2023-11-28 00:49:25,752 | INFO     | monitor loop #217: job 0:6035045505 is in state 'finished'
[2023-11-28 00:49:49] 2023-11-28 00:49:25,753 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-28 00:49:49] 2023-11-28 00:49:27,648 | INFO     | 1288s have passed since pilot start
[2023-11-28 00:49:49] 2023-11-28 00:49:28,256 | INFO     | monitor loop #218: job 0:6035045505 is in state 'finished'
[2023-11-28 00:49:49] 2023-11-28 00:49:28,257 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-11-28 00:49:49] 2023-11-28 00:49:28,327 | INFO     | CPU arch script returned: x86-64-v2
[2023-11-28 00:49:49] 2023-11-28 00:49:28,327 | INFO     | using path: /home/m/BOINC/slots/0/PanDA_Pilot-6035045505/memory_monitor_summary.json (trf name=prmon)
[2023-11-28 00:49:49] 2023-11-28 00:49:28,328 | INFO     | extracted standard info from prmon json
[2023-11-28 00:49:49] 2023-11-28 00:49:28,328 | INFO     | extracted standard memory fields from prmon json
[2023-11-28 00:49:49] 2023-11-28 00:49:28,328 | WARNING  | wrong length of table data, x=[1701131834.0, 1701131895.0, 1701131956.0, 1701132017.0], y=[1635410.0, 1651278.0, 1651032.0, 1658804.0] (must be same and length>=4)
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | ..............................
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . Timing measurements:
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . get job = 88 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . initial setup = 54 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . payload setup = 11 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . stage-in = 76 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . payload execution = 640 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . stage-out = 387 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | . log creation = 0 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,329 | INFO     | ..............................
[2023-11-28 00:49:49] 2023-11-28 00:49:28,795 | INFO     | 
[2023-11-28 00:49:49] 2023-11-28 00:49:28,796 | INFO     | job summary report
[2023-11-28 00:49:49] 2023-11-28 00:49:28,796 | INFO     | --------------------------------------------------
[2023-11-28 00:49:49] 2023-11-28 00:49:28,796 | INFO     | PanDA job id: 6035045505
[2023-11-28 00:49:49] 2023-11-28 00:49:28,796 | INFO     | task id: NULL
[2023-11-28 00:49:49] 2023-11-28 00:49:28,796 | INFO     | errors: (none)
[2023-11-28 00:49:49] 2023-11-28 00:49:28,796 | INFO     | status: LOG_TRANSFER = DONE 
[2023-11-28 00:49:49] 2023-11-28 00:49:28,796 | INFO     | pilot state: finished 
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | transexitcode: 0
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | exeerrorcode: 0
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | exeerrordiag: 
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | exitcode: 0
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | exitmsg: OK
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | cpuconsumptiontime: 459 s
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | nevents: 2
[2023-11-28 00:49:49] 2023-11-28 00:49:28,797 | INFO     | neventsw: 0
[2023-11-28 00:49:49] 2023-11-28 00:49:28,798 | INFO     | pid: 14388
[2023-11-28 00:49:49] 2023-11-28 00:49:28,798 | INFO     | pgrp: 14388
[2023-11-28 00:49:49] 2023-11-28 00:49:28,798 | INFO     | corecount: 4
[2023-11-28 00:49:49] 2023-11-28 00:49:28,798 | INFO     | event service: False
[2023-11-28 00:49:49] 2023-11-28 00:49:28,798 | INFO     | sizes: {0: 2443375, 1: 2444910, 12: 2445056, 22: 2445084, 33: 2445112, 44: 2445140, 54: 2445296, 65: 2445324, 75: 2445352, 82: 2445440, 86: 2445496, 655: 2467541, 
[2023-11-28 00:49:49] 2023-11-28 00:49:28,798 | INFO     | --------------------------------------------------
[2023-11-28 00:49:49] 2023-11-28 00:49:28,798 | INFO     | 
[2023-11-28 00:49:49] 2023-11-28 00:49:28,799 | INFO     | executing command: ls -lF /home/m/BOINC/slots/0
[2023-11-28 00:49:49] 2023-11-28 00:49:28,821 | INFO     | queue jobs had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,821 | INFO     | queue payloads had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue data_in had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue data_out had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,822 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,823 | INFO     | queue completed_jobids has 1 job(s)
[2023-11-28 00:49:49] 2023-11-28 00:49:28,824 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,824 | INFO     | queue messages had 0 job(s) [purged]
[2023-11-28 00:49:49] 2023-11-28 00:49:28,824 | INFO     | job 6035045505 has completed (purged errors)
[2023-11-28 00:49:49] 2023-11-28 00:49:28,824 | INFO     | overall cleanup function is called
[2023-11-28 00:49:49] 2023-11-28 00:49:29,831 | INFO     | --- collectZombieJob: --- 10, [14388]
[2023-11-28 00:49:49] 2023-11-28 00:49:29,831 | INFO     | zombie collector waiting for pid 14388
[2023-11-28 00:49:49] 2023-11-28 00:49:29,831 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-11-28 00:49:49] 2023-11-28 00:49:30,837 | INFO     | collected zombie processes
[2023-11-28 00:49:49] 2023-11-28 00:49:30,837 | INFO     | will now attempt to kill all subprocesses of pid=14388
[2023-11-28 00:49:49] 2023-11-28 00:49:30,881 | INFO     | process IDs to be killed: [14388] (in reverse order)
[2023-11-28 00:49:49] 2023-11-28 00:49:30,915 | WARNING  | found no corresponding commands to process id(s)
[2023-11-28 00:49:49] 2023-11-28 00:49:30,915 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-11-28 00:49:49] 2023-11-28 00:49:30,917 | INFO     | did not find any defunct processes belonging to 14388
[2023-11-28 00:49:49] 2023-11-28 00:49:30,918 | INFO     | did not find any defunct processes belonging to 14388
[2023-11-28 00:49:49] 2023-11-28 00:49:30,918 | INFO     | ready for new job
[2023-11-28 00:49:49] 2023-11-28 00:49:30,918 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-11-28 00:49:49] 2023-11-28 00:49:30,919 | INFO     | **************************************
[2023-11-28 00:49:49] 2023-11-28 00:49:30,919 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2023-11-28 00:49:49] 2023-11-28 00:49:30,919 | INFO     | **************************************
[2023-11-28 00:49:49] 2023-11-28 00:49:30,919 | INFO     | 
[2023-11-28 00:49:49] 2023-11-28 00:49:30,937 | INFO     | architecture information:
[2023-11-28 00:49:49] 2023-11-28 00:49:30,937 | INFO     | executing command: cat /etc/os-release
[2023-11-28 00:49:49] 2023-11-28 00:49:30,954 | INFO     | cat /etc/os-release:
[2023-11-28 00:49:49] NAME="CentOS Linux"
[2023-11-28 00:49:49] VERSION="7 (Core)"
[2023-11-28 00:49:49] ID="centos"
[2023-11-28 00:49:49] ID_LIKE="rhel fedora"
[2023-11-28 00:49:49] VERSION_ID="7"
[2023-11-28 00:49:49] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-11-28 00:49:49] ANSI_COLOR="0;31"
[2023-11-28 00:49:49] CPE_NAME="cpe:/o:centos:centos:7"
[2023-11-28 00:49:49] HOME_URL="https://www.centos.org/"
[2023-11-28 00:49:49] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-11-28 00:49:49] 
[2023-11-28 00:49:49] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-11-28 00:49:49] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-11-28 00:49:49] REDHAT_SUPPORT_PRODUCT="centos"
[2023-11-28 00:49:49] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-11-28 00:49:49] 
[2023-11-28 00:49:49] 2023-11-28 00:49:30,955 | INFO     | **************************************
[2023-11-28 00:49:49] 2023-11-28 00:49:31,458 | INFO     | executing command: df -mP /home/m/BOINC/slots/0
[2023-11-28 00:49:49] 2023-11-28 00:49:31,476 | INFO     | sufficient remaining disk space (423481049088 B)
[2023-11-28 00:49:49] 2023-11-28 00:49:31,477 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-11-28 00:49:49] 2023-11-28 00:49:31,477 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-11-28 00:49:49] 2023-11-28 00:49:31,477 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-11-28 00:49:49] 2023-11-28 00:49:31,477 | INFO     | found 0 job(s) in 20 queues
[2023-11-28 00:49:49] 2023-11-28 00:49:31,478 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-11-28 00:49:49] 2023-11-28 00:49:31,478 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-11-28 00:49:49] 2023-11-28 00:49:31,497 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-11-28 00:49:49] 2023-11-28 00:49:31,511 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-11-28 00:49:49] 2023-11-28 00:49:31,765 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-11-28 00:49:49] 2023-11-28 00:49:31,765 | INFO     | aborting loop
[2023-11-28 00:49:49] 2023-11-28 00:49:32,482 | INFO     | [job] retrieve thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:32,678 | INFO     | [payload] execute_payloads thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:32,729 | INFO     | [data] control thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:32,770 | INFO     | [job] job monitor thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:32,777 | INFO     | [payload] validate_post thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,318 | INFO     | [data] copytool_in thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,377 | INFO     | [job] validate thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,399 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-11-28 00:49:49] 2023-11-28 00:49:33,517 | INFO     | [data] copytool_out thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,555 | INFO     | [job] create_data_payload thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,724 | INFO     | [payload] validate_pre thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,828 | INFO     | [payload] failed_post thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,902 | INFO     | [payload] control thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:33,984 | INFO     | [job] control thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:34,405 | INFO     | [job] queue monitor thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:35,498 | INFO     | [data] queue_monitor thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:41,530 | INFO     | job.realtimelogging is not enabled
[2023-11-28 00:49:49] 2023-11-28 00:49:42,536 | INFO     | [payload] run_realtimelog thread has finished
[2023-11-28 00:49:49] 2023-11-28 00:49:44,387 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140445259110208)>', '<ExcThread(monitor, started 140444616877824)>']
[2023-11-28 00:49:49] 2023-11-28 00:49:44,543 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-11-28 00:49:49] 2023-11-28 00:49:44,543 | INFO     | [monitor] control thread has ended
[2023-11-28 00:49:49] 2023-11-28 00:49:49,412 | INFO     | end of generic workflow (traces error code: 0)
[2023-11-28 00:49:49] 2023-11-28 00:49:49,413 | INFO     | traces error code: 0
[2023-11-28 00:49:49] 2023-11-28 00:49:49,413 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-11-28 00:49:49] 2023-11-28 00:49:49,469 [wrapper] ==== pilot stdout END ====
[2023-11-28 00:49:49] 2023-11-28 00:49:49,474 [wrapper] ==== wrapper stdout RESUME ====
[2023-11-28 00:49:49] 2023-11-28 00:49:49,479 [wrapper] pilotpid: 7260
[2023-11-28 00:49:49] 2023-11-28 00:49:49,484 [wrapper] Pilot exit status: 0
[2023-11-28 00:49:49] 2023-11-28 00:49:49,499 [wrapper] pandaids: 6035045505
[2023-11-28 00:49:49] 2023-11-28 00:49:49,509 [wrapper] apfmon messages muted
[2023-11-28 00:49:49] 2023-11-28 00:49:49,514 [wrapper] Test setup, not cleaning
[2023-11-28 00:49:49] 2023-11-28 00:49:49,519 [wrapper] ==== wrapper stdout END ====
[2023-11-28 00:49:49] 2023-11-28 00:49:49,524 [wrapper] ==== wrapper stderr END ====
[2023-11-28 00:49:49] 2023-11-28 00:49:49,534 [wrapper] wrapperexiting ec=0, duration=1373
[2023-11-28 00:49:49] 2023-11-28 00:49:49,539 [wrapper] apfmon messages muted
[2023-11-28 00:49:49]  *** Error codes and diagnostics ***
[2023-11-28 00:49:49]     "exeErrorCode": 0,
[2023-11-28 00:49:49]     "exeErrorDiag": "",
[2023-11-28 00:49:49]     "pilotErrorCode": 0,
[2023-11-28 00:49:49]     "pilotErrorDiag": "",
[2023-11-28 00:49:49]  *** Listing of results directory ***
[2023-11-28 00:49:49] total 43036
[2023-11-28 00:49:49] -rwx------ 1 m m    27439 Nov 28 00:19 runpilot2-wrapper.sh
[2023-11-28 00:49:49] -rw-r--r-- 1 m m     4388 Nov 28 00:19 queuedata.json
[2023-11-28 00:49:49] -rw-r--r-- 1 m m   441289 Nov 28 00:19 pilot3.tar.gz
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m      107 Nov 28 00:26 wrapper_26015_x86_64-pc-linux-gnu
[2023-11-28 00:49:49] -rwxr-xr-x 1 m m     7986 Nov 28 00:26 run_atlas
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m      112 Nov 28 00:26 job.xml
[2023-11-28 00:49:49] -rw-r--r-- 2 m m    17618 Nov 28 00:26 start_atlas.sh
[2023-11-28 00:49:49] drwxrwx--x 2 m m     4096 Nov 28 00:26 shared
[2023-11-28 00:49:49] -rw-r--r-- 2 m m   452877 Nov 28 00:26 input.tar.gz
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m     5723 Nov 28 00:26 init_data.xml
[2023-11-28 00:49:49] -rw-r--r-- 2 m m 37498453 Nov 28 00:26 EVNT.04972714._000025.pool.root.1
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m        0 Nov 28 00:26 boinc_lockfile
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m     2753 Nov 28 00:26 pandaJob.out
[2023-11-28 00:49:49] -rw------- 1 m m      424 Nov 28 00:26 setup.sh.local
[2023-11-28 00:49:49] -rw------- 1 m m   977703 Nov 28 00:27 agis_schedconf.cvmfs.json
[2023-11-28 00:49:49] -rw------- 1 m m  1365088 Nov 28 00:28 cric_ddmendpoints.json
[2023-11-28 00:49:49] drwx------ 4 m m     4096 Nov 28 00:30 pilot3
[2023-11-28 00:49:49] -rw------- 1 m m  1238773 Nov 28 00:42 output.1.a0e82708-ec18-4f41-8ac8-94a9eec32943_86181.pool.root
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m      532 Nov 28 00:42 boinc_task_state.xml
[2023-11-28 00:49:49] -rw------- 1 m m     1014 Nov 28 00:42 memory_monitor_summary.json
[2023-11-28 00:49:49] -rw------- 1 m m   158128 Nov 28 00:45 a0e82708-ec18-4f41-8ac8-94a9eec32943_86181.1.job.log.tgz
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m       25 Nov 28 00:49 wrapper_checkpoint.txt
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m     8192 Nov 28 00:49 boinc_mmap_file
[2023-11-28 00:49:49] -rw------- 1 m m     8078 Nov 28 00:49 heartbeat.json
[2023-11-28 00:49:49] -rw------- 1 m m     4096 Nov 28 00:49 pilotlog.txt
[2023-11-28 00:49:49] -rw------- 1 m m   161393 Nov 28 00:49 a0e82708-ec18-4f41-8ac8-94a9eec32943_86181.1.job.log
[2023-11-28 00:49:49] -rw------- 1 m m      464 Nov 28 00:49 output.list
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m      748 Nov 28 00:49 runtime_log
[2023-11-28 00:49:49] -rw------- 1 m m  1576960 Nov 28 00:49 result.tar.gz
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m    11919 Nov 28 00:49 runtime_log.err
[2023-11-28 00:49:49] -rw------- 1 m m      626 Nov 28 00:49 aJgLDmT00R4n7Olcko1bjSoqABFKDmABFKDmyeZQDms7GKDmg35IXn.diag
[2023-11-28 00:49:49] -rw-rw-r-- 1 m m    22941 Nov 28 00:49 stderr.txt
[2023-11-28 00:49:49] HITS file was successfully produced:
[2023-11-28 00:49:49] -rw------- 1 m m 1238773 Nov 28 00:42 shared/HITS.pool.root.1
[2023-11-28 00:49:49]  *** Contents of shared directory: ***
[2023-11-28 00:49:49] total 39836
[2023-11-28 00:49:49] -rw-r--r-- 2 m m    17618 Nov 28 00:26 start_atlas.sh
[2023-11-28 00:49:49] -rw-r--r-- 2 m m   452877 Nov 28 00:26 input.tar.gz
[2023-11-28 00:49:49] -rw-r--r-- 2 m m 37498453 Nov 28 00:26 ATLAS.root_0
[2023-11-28 00:49:49] -rw------- 1 m m  1238773 Nov 28 00:42 HITS.pool.root.1
[2023-11-28 00:49:49] -rw------- 1 m m  1576960 Nov 28 00:49 result.tar.gz
00:49:51 (3054): run_atlas exited; CPU time 460.234468
00:49:51 (3054): called boinc_finish(0)

</stderr_txt>
]]>

©2024 CERN