Name | mq6MDmOPXW4n7Olcko1bjSoqABFKDmABFKDmyeZQDmrmHKDmcxwJXn_1 |
Workunit | 2368826 |
Created | 10 Dec 2023, 12:35:20 UTC |
Sent | 10 Dec 2023, 13:13:15 UTC |
Report deadline | 17 Dec 2023, 13:13:15 UTC |
Received | 10 Dec 2023, 13:37:15 UTC |
Server state | Over |
Outcome | Success |
Client state | Done |
Exit status | 0 (0x00000000) |
Computer ID | 4889 |
Run time | 20 min 52 sec |
CPU time | 2 min 42 sec |
Validate state | Valid |
Credit | 28.26 |
Device peak FLOPS | 33.73 GFLOPS |
Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
Peak working set size | 2.66 GB |
Peak swap size | 3.10 GB |
Peak disk usage | 78.95 MB |
<core_client_version>7.18.1</core_client_version> <![CDATA[ <stderr_txt> 08:15:57 (2629486): wrapper (7.7.26015): starting 08:15:57 (2629486): wrapper: running run_atlas (--nthreads 4) [2023-12-10 08:15:57] Arguments: --nthreads 4 [2023-12-10 08:15:57] Threads: 4 [2023-12-10 08:15:57] Checking for CVMFS [2023-12-10 08:16:00] Probing /cvmfs/atlas.cern.ch... OK [2023-12-10 08:16:01] Probing /cvmfs/atlas-condb.cern.ch... OK [2023-12-10 08:16:01] Running cvmfs_config stat atlas.cern.ch [2023-12-10 08:16:02] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE [2023-12-10 08:16:02] 2.11.1.0 2629698 0 24784 126870 3 1 2866345 4194305 0 130560 0 0 0.000 961 2975 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1 [2023-12-10 08:16:02] CVMFS is ok [2023-12-10 08:16:02] Efficiency of ATLAS tasks can be improved by the following measure(s): [2023-12-10 08:16:02] Small home clusters do not require a local http proxy but it is suggested if [2023-12-10 08:16:02] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks. [2023-12-10 08:16:02] Further information can be found at the LHC@home message board. [2023-12-10 08:16:02] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 [2023-12-10 08:16:02] Checking for apptainer binary... [2023-12-10 08:16:02] apptainer is not installed, using version from CVMFS [2023-12-10 08:16:02] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname [2023-12-10 08:16:02] 3070Ti [2023-12-10 08:16:02] apptainer works [2023-12-10 08:16:02] Set ATHENA_PROC_NUMBER=4 [2023-12-10 08:16:02] Set ATHENA_CORE_NUMBER=4 [2023-12-10 08:16:02] Starting ATLAS job with PandaID=6047235906 [2023-12-10 08:16:02] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/15 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh [2023-12-10 08:36:46] *** The last 200 lines of the pilot log: *** [2023-12-10 08:36:46] 2023-12-10 13:35:42,082 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:35:44,584 | INFO | monitor loop #191: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:35:44,585 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:35:47,086 | INFO | monitor loop #192: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:35:47,086 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:35:49,589 | INFO | monitor loop #193: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:35:49,590 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:35:52,093 | INFO | monitor loop #194: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:35:52,093 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:35:54,594 | INFO | monitor loop #195: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:35:54,594 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:35:57,097 | INFO | monitor loop #196: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:35:57,098 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:35:59,598 | INFO | monitor loop #197: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:35:59,598 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:36:02,101 | INFO | monitor loop #198: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:36:02,102 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:36:03,830 | INFO | 1173s have passed since pilot start [2023-12-10 08:36:46] 2023-12-10 13:36:04,602 | INFO | monitor loop #199: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:36:04,602 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:36:07,105 | INFO | monitor loop #200: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:36:07,106 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:36:09,606 | INFO | monitor loop #201: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:36:09,606 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:36:12,109 | INFO | monitor loop #202: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:36:12,110 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:36:14,610 | INFO | monitor loop #203: job 0:6047235906 is in state 'stageout' [2023-12-10 08:36:46] 2023-12-10 13:36:14,610 | WARNING | aborting job monitor tasks since payload process 2640380 is not running [2023-12-10 08:36:46] 2023-12-10 13:36:15,922 | INFO | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json [2023-12-10 08:36:46] 2023-12-10 13:36:16,596 | WARNING | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: [2023-12-10 08:36:46] 2023-12-10 13:36:16,597 | WARNING | cache file=/var/lib/boinc-client/slots/15/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/15/ag [2023-12-10 08:36:46] 2023-12-10 13:36:16,633 | INFO | transferring file cd73ce8e-50ea-484b-a61b-d5f02dd698be_44558.1.job.log.tgz from /var/lib/boinc-client/slots/15/PanDA_Pilot-6047235906/cd73ce8e-50ea-484b-a61b-d5f02 [2023-12-10 08:36:46] 2023-12-10 13:36:16,633 | INFO | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/15/PanDA_Pilot-6047235906/cd73ce8e-50ea-484b-a61b-d5f02dd698be_44558.1.job.log.tgz /var/lib/boinc-cl [2023-12-10 08:36:46] 2023-12-10 13:36:16,650 | INFO | Adding to output.list: cd73ce8e-50ea-484b-a61b-d5f02dd698be_44558.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e9/3b/cd73ce8e-50ea- [2023-12-10 08:36:46] 2023-12-10 13:36:16,651 | INFO | summary of transferred files: [2023-12-10 08:36:46] 2023-12-10 13:36:16,651 | INFO | -- lfn=cd73ce8e-50ea-484b-a61b-d5f02dd698be_44558.1.job.log.tgz, status_code=0, status=transferred [2023-12-10 08:36:46] 2023-12-10 13:36:16,651 | INFO | stage-out finished correctly [2023-12-10 08:36:46] 2023-12-10 13:36:17,118 | INFO | monitor loop #204: job 0:6047235906 is in state 'finished' [2023-12-10 08:36:46] 2023-12-10 13:36:17,123 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-12-10 08:36:46] 2023-12-10 13:36:18,616 | INFO | finished stage-out for finished payload, adding job to finished_jobs queue [2023-12-10 08:36:46] 2023-12-10 13:36:19,626 | INFO | monitor loop #205: job 0:6047235906 is in state 'finished' [2023-12-10 08:36:46] 2023-12-10 13:36:19,626 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-12-10 08:36:46] 2023-12-10 13:36:19,710 | INFO | job 6047235906 has state=finished [2023-12-10 08:36:46] 2023-12-10 13:36:19,711 | INFO | preparing for final server update for job 6047235906 in state='finished' [2023-12-10 08:36:46] 2023-12-10 13:36:19,711 | INFO | this job has now completed (state=finished) [2023-12-10 08:36:46] 2023-12-10 13:36:19,711 | INFO | pilot will not update the server (heartbeat message will be written to file) [2023-12-10 08:36:46] 2023-12-10 13:36:19,711 | INFO | job 6047235906 has finished - writing final server update [2023-12-10 08:36:46] 2023-12-10 13:36:19,712 | INFO | total number of processed events: 2 (read) [2023-12-10 08:36:46] 2023-12-10 13:36:19,715 | INFO | executing command: lscpu [2023-12-10 08:36:46] 2023-12-10 13:36:19,745 | INFO | found 16 cores (16 cores per socket, 1 sockets) [2023-12-10 08:36:46] 2023-12-10 13:36:19,745 | INFO | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo [2023-12-10 08:36:46] 2023-12-10 13:36:19,775 | INFO | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup [2023-12-10 08:36:46] 2023-12-10 13:36:22,129 | INFO | monitor loop #206: job 0:6047235906 is in state 'finished' [2023-12-10 08:36:46] 2023-12-10 13:36:22,129 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-12-10 08:36:46] 2023-12-10 13:36:24,630 | INFO | monitor loop #207: job 0:6047235906 is in state 'finished' [2023-12-10 08:36:46] 2023-12-10 13:36:24,630 | INFO | will abort job monitoring soon since job state=finished (job is still in queue) [2023-12-10 08:36:46] 2023-12-10 13:36:26,070 | INFO | CPU arch script returned: x86-64-v3 [2023-12-10 08:36:46] 2023-12-10 13:36:26,070 | INFO | using path: /var/lib/boinc-client/slots/15/PanDA_Pilot-6047235906/memory_monitor_summary.json (trf name=prmon) [2023-12-10 08:36:46] 2023-12-10 13:36:26,071 | INFO | extracted standard info from prmon json [2023-12-10 08:36:46] 2023-12-10 13:36:26,071 | INFO | extracted standard memory fields from prmon json [2023-12-10 08:36:46] 2023-12-10 13:36:26,072 | WARNING | wrong length of table data, x=[1702214718.0, 1702214779.0, 1702214840.0], y=[1019050.0, 1119202.0, 1448578.0] (must be same and length>=4) [2023-12-10 08:36:46] 2023-12-10 13:36:26,072 | INFO | .............................. [2023-12-10 08:36:46] 2023-12-10 13:36:26,072 | INFO | . Timing measurements: [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | . get job = 76 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | . initial setup = 60 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | . payload setup = 4 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | . stage-in = 63 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | . payload execution = 580 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | . stage-out = 383 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | . log creation = 0 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,073 | INFO | .............................. [2023-12-10 08:36:46] 2023-12-10 13:36:26,362 | INFO | [2023-12-10 08:36:46] 2023-12-10 13:36:26,362 | INFO | job summary report [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | -------------------------------------------------- [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | PanDA job id: 6047235906 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | task id: NULL [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | errors: (none) [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | status: LOG_TRANSFER = DONE [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | pilot state: finished [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | transexitcode: 0 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | exeerrorcode: 0 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | exeerrordiag: [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | exitcode: 0 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | exitmsg: OK [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | cpuconsumptiontime: 167 s [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | nevents: 2 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | neventsw: 0 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | pid: 2640380 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | pgrp: 2640380 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | corecount: 4 [2023-12-10 08:36:46] 2023-12-10 13:36:26,363 | INFO | event service: False [2023-12-10 08:36:46] 2023-12-10 13:36:26,364 | INFO | sizes: {0: 2429773, 1: 2429972, 11: 2430118, 22: 2430146, 33: 2430174, 43: 2430202, 54: 2430358, 64: 2430386, 68: 2430502, 75: 2430530, 588: 2452258, 971: 2461324, [2023-12-10 08:36:46] 2023-12-10 13:36:26,364 | INFO | -------------------------------------------------- [2023-12-10 08:36:46] 2023-12-10 13:36:26,364 | INFO | [2023-12-10 08:36:46] 2023-12-10 13:36:26,364 | INFO | executing command: ls -lF /var/lib/boinc-client/slots/15 [2023-12-10 08:36:46] 2023-12-10 13:36:26,380 | INFO | queue jobs had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue payloads had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue data_in had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue data_out had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue current_data_in had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue validated_jobs had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue validated_payloads had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue monitored_payloads had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue finished_jobs had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue finished_payloads had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue finished_data_in had 1 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue finished_data_out had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue failed_jobs had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue failed_payloads had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue failed_data_in had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue failed_data_out had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue completed_jobs had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,381 | INFO | queue completed_jobids has 1 job(s) [2023-12-10 08:36:46] 2023-12-10 13:36:26,382 | INFO | queue realtimelog_payloads had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,382 | INFO | queue messages had 0 job(s) [purged] [2023-12-10 08:36:46] 2023-12-10 13:36:26,382 | INFO | job 6047235906 has completed (purged errors) [2023-12-10 08:36:46] 2023-12-10 13:36:26,382 | INFO | overall cleanup function is called [2023-12-10 08:36:46] 2023-12-10 13:36:27,386 | INFO | --- collectZombieJob: --- 10, [2640380] [2023-12-10 08:36:46] 2023-12-10 13:36:27,386 | INFO | zombie collector waiting for pid 2640380 [2023-12-10 08:36:46] 2023-12-10 13:36:27,386 | INFO | harmless exception when collecting zombies: [Errno 10] No child processes [2023-12-10 08:36:46] 2023-12-10 13:36:28,390 | INFO | collected zombie processes [2023-12-10 08:36:46] 2023-12-10 13:36:28,390 | INFO | will now attempt to kill all subprocesses of pid=2640380 [2023-12-10 08:36:46] 2023-12-10 13:36:28,460 | INFO | process IDs to be killed: [2640380] (in reverse order) [2023-12-10 08:36:46] 2023-12-10 13:36:28,509 | WARNING | found no corresponding commands to process id(s) [2023-12-10 08:36:46] 2023-12-10 13:36:28,510 | INFO | Do not look for orphan processes in BOINC jobs [2023-12-10 08:36:46] 2023-12-10 13:36:28,513 | INFO | did not find any defunct processes belonging to 2640380 [2023-12-10 08:36:46] 2023-12-10 13:36:28,516 | INFO | did not find any defunct processes belonging to 2640380 [2023-12-10 08:36:46] 2023-12-10 13:36:28,516 | INFO | ready for new job [2023-12-10 08:36:46] 2023-12-10 13:36:28,516 | INFO | pilot has finished with previous job - re-establishing logging [2023-12-10 08:36:46] 2023-12-10 13:36:28,517 | INFO | ************************************** [2023-12-10 08:36:46] 2023-12-10 13:36:28,517 | INFO | *** PanDA Pilot version 3.7.0.36 *** [2023-12-10 08:36:46] 2023-12-10 13:36:28,517 | INFO | ************************************** [2023-12-10 08:36:46] 2023-12-10 13:36:28,517 | INFO | [2023-12-10 08:36:46] 2023-12-10 13:36:28,519 | INFO | architecture information: [2023-12-10 08:36:46] 2023-12-10 13:36:28,519 | INFO | executing command: cat /etc/os-release [2023-12-10 08:36:46] 2023-12-10 13:36:28,530 | INFO | cat /etc/os-release: [2023-12-10 08:36:46] NAME="CentOS Linux" [2023-12-10 08:36:46] VERSION="7 (Core)" [2023-12-10 08:36:46] ID="centos" [2023-12-10 08:36:46] ID_LIKE="rhel fedora" [2023-12-10 08:36:46] VERSION_ID="7" [2023-12-10 08:36:46] PRETTY_NAME="CentOS Linux 7 (Core)" [2023-12-10 08:36:46] ANSI_COLOR="0;31" [2023-12-10 08:36:46] CPE_NAME="cpe:/o:centos:centos:7" [2023-12-10 08:36:46] HOME_URL="https://www.centos.org/" [2023-12-10 08:36:46] BUG_REPORT_URL="https://bugs.centos.org/" [2023-12-10 08:36:46] [2023-12-10 08:36:46] CENTOS_MANTISBT_PROJECT="CentOS-7" [2023-12-10 08:36:46] CENTOS_MANTISBT_PROJECT_VERSION="7" [2023-12-10 08:36:46] REDHAT_SUPPORT_PRODUCT="centos" [2023-12-10 08:36:46] REDHAT_SUPPORT_PRODUCT_VERSION="7" [2023-12-10 08:36:46] [2023-12-10 08:36:46] 2023-12-10 13:36:28,530 | INFO | ************************************** [2023-12-10 08:36:46] 2023-12-10 13:36:29,033 | INFO | executing command: df -mP /var/lib/boinc-client/slots/15 [2023-12-10 08:36:46] 2023-12-10 13:36:29,050 | INFO | sufficient remaining disk space (1816879169536 B) [2023-12-10 08:36:46] 2023-12-10 13:36:29,050 | WARNING | since timefloor is set to 0, pilot was only allowed to run one job [2023-12-10 08:36:46] 2023-12-10 13:36:29,050 | WARNING | setting graceful_stop since proceed_with_getjob() returned False (pilot will end) [2023-12-10 08:36:46] 2023-12-10 13:36:29,051 | WARNING | job:job_monitor:received graceful stop - abort after this iteration [2023-12-10 08:36:46] 2023-12-10 13:36:29,051 | WARNING | aborting monitor loop since graceful_stop has been set (timing out remaining threads) [2023-12-10 08:36:46] 2023-12-10 13:36:29,051 | INFO | aborting loop [2023-12-10 08:36:46] 2023-12-10 13:36:29,051 | INFO | found 0 job(s) in 20 queues [2023-12-10 08:36:46] 2023-12-10 13:36:29,051 | WARNING | pilot monitor received instruction that args.graceful_stop has been set [2023-12-10 08:36:46] 2023-12-10 13:36:29,051 | WARNING | will wait for a maximum of 300 s for threads to finish [2023-12-10 08:36:46] 2023-12-10 13:36:29,190 | WARNING | data:queue_monitoring:received graceful stop - abort after this iteration [2023-12-10 08:36:46] 2023-12-10 13:36:29,726 | WARNING | data:copytool_out:received graceful stop - abort after this iteration [2023-12-10 08:36:46] 2023-12-10 13:36:30,054 | INFO | [job] job monitor thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,056 | INFO | [job] retrieve thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,146 | INFO | [payload] validate_post thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,262 | INFO | [data] copytool_in thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,422 | INFO | [payload] control thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,666 | INFO | [job] validate thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,706 | INFO | [payload] failed_post thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,866 | INFO | [payload] execute_payloads thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,870 | INFO | [job] create_data_payload thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,947 | INFO | [payload] validate_pre thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:30,954 | INFO | [data] control thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:31,022 | INFO | [job] control thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:31,151 | WARNING | job:queue_monitor:received graceful stop - abort after this iteration [2023-12-10 08:36:46] 2023-12-10 13:36:31,730 | INFO | [data] copytool_out thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:32,154 | INFO | [job] queue monitor thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:33,194 | INFO | [data] queue_monitor thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:39,994 | INFO | job.realtimelogging is not enabled [2023-12-10 08:36:46] 2023-12-10 13:36:40,998 | INFO | [payload] run_realtimelog thread has finished [2023-12-10 08:36:46] 2023-12-10 13:36:41,526 | INFO | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140383779379008)>', '<ExcThread(monitor, started 140383245805312)>'] [2023-12-10 08:36:46] 2023-12-10 13:36:42,102 | WARNING | job_aborted has been set - aborting pilot monitoring [2023-12-10 08:36:46] 2023-12-10 13:36:42,102 | INFO | [monitor] control thread has ended [2023-12-10 08:36:46] 2023-12-10 13:36:46,550 | INFO | end of generic workflow (traces error code: 0) [2023-12-10 08:36:46] 2023-12-10 13:36:46,551 | INFO | traces error code: 0 [2023-12-10 08:36:46] 2023-12-10 13:36:46,551 | INFO | pilot has finished (exit code=0, shell exit code=0) [2023-12-10 08:36:46] 2023-12-10 13:36:46,603 [wrapper] ==== pilot stdout END ==== [2023-12-10 08:36:46] 2023-12-10 13:36:46,605 [wrapper] ==== wrapper stdout RESUME ==== [2023-12-10 08:36:46] 2023-12-10 13:36:46,607 [wrapper] pilotpid: 2633812 [2023-12-10 08:36:46] 2023-12-10 13:36:46,608 [wrapper] Pilot exit status: 0 [2023-12-10 08:36:46] 2023-12-10 13:36:46,616 [wrapper] pandaids: 6047235906 [2023-12-10 08:36:46] 2023-12-10 13:36:46,620 [wrapper] apfmon messages muted [2023-12-10 08:36:46] 2023-12-10 13:36:46,622 [wrapper] Test setup, not cleaning [2023-12-10 08:36:46] 2023-12-10 13:36:46,625 [wrapper] ==== wrapper stdout END ==== [2023-12-10 08:36:46] 2023-12-10 13:36:46,627 [wrapper] ==== wrapper stderr END ==== [2023-12-10 08:36:46] 2023-12-10 13:36:46,631 [wrapper] wrapperexiting ec=0, duration=1243 [2023-12-10 08:36:46] 2023-12-10 13:36:46,632 [wrapper] apfmon messages muted [2023-12-10 08:36:46] *** Error codes and diagnostics *** [2023-12-10 08:36:46] "exeErrorCode": 0, [2023-12-10 08:36:46] "exeErrorDiag": "", [2023-12-10 08:36:46] "pilotErrorCode": 0, [2023-12-10 08:36:46] "pilotErrorDiag": "", [2023-12-10 08:36:46] *** Listing of results directory *** [2023-12-10 08:36:46] total 43592 [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 441289 Dec 10 06:22 pilot3.tar.gz [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 4388 Dec 10 06:42 queuedata.json [2023-12-10 08:36:46] -rwx------ 1 boinc boinc 27439 Dec 10 06:44 runpilot2-wrapper.sh [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 107 Dec 10 08:15 wrapper_26015_x86_64-pc-linux-gnu [2023-12-10 08:36:46] -rwxr-xr-x 1 boinc boinc 7986 Dec 10 08:15 run_atlas [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 112 Dec 10 08:15 job.xml [2023-12-10 08:36:46] -rw-r--r-- 2 boinc boinc 37738636 Dec 10 08:15 EVNT.04972714._000024.pool.root.1 [2023-12-10 08:36:46] -rw-r--r-- 2 boinc boinc 17618 Dec 10 08:15 start_atlas.sh [2023-12-10 08:36:46] drwxrwx--x 2 boinc boinc 4096 Dec 10 08:15 shared [2023-12-10 08:36:46] -rw-r--r-- 2 boinc boinc 452843 Dec 10 08:15 input.tar.gz [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 9486 Dec 10 08:15 init_data.xml [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 0 Dec 10 08:15 boinc_lockfile [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 2681 Dec 10 08:16 pandaJob.out [2023-12-10 08:36:46] -rw------- 1 boinc boinc 424 Dec 10 08:16 setup.sh.local [2023-12-10 08:36:46] -rw------- 1 boinc boinc 1358245 Dec 10 08:17 cric_ddmendpoints.json [2023-12-10 08:36:46] -rw------- 1 boinc boinc 975803 Dec 10 08:17 agis_schedconf.cvmfs.json [2023-12-10 08:36:46] drwx------ 4 boinc boinc 4096 Dec 10 08:18 pilot3 [2023-12-10 08:36:46] -rw------- 1 boinc boinc 1395214 Dec 10 08:29 output.1.cd73ce8e-50ea-484b-a61b-d5f02dd698be_44558.pool.root [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 532 Dec 10 08:29 boinc_task_state.xml [2023-12-10 08:36:46] -rw------- 1 boinc boinc 999 Dec 10 08:29 memory_monitor_summary.json [2023-12-10 08:36:46] -rw------- 1 boinc boinc 169844 Dec 10 08:33 cd73ce8e-50ea-484b-a61b-d5f02dd698be_44558.1.job.log.tgz [2023-12-10 08:36:46] -rw------- 1 boinc boinc 7023 Dec 10 08:36 heartbeat.json [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 25 Dec 10 08:36 wrapper_checkpoint.txt [2023-12-10 08:36:46] -rw------- 1 boinc boinc 4106 Dec 10 08:36 pilotlog.txt [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 8192 Dec 10 08:36 boinc_mmap_file [2023-12-10 08:36:46] -rw------- 1 boinc boinc 158201 Dec 10 08:36 cd73ce8e-50ea-484b-a61b-d5f02dd698be_44558.1.job.log [2023-12-10 08:36:46] -rw------- 1 boinc boinc 464 Dec 10 08:36 output.list [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 748 Dec 10 08:36 runtime_log [2023-12-10 08:36:46] -rw------- 1 boinc boinc 1740800 Dec 10 08:36 result.tar.gz [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 12099 Dec 10 08:36 runtime_log.err [2023-12-10 08:36:46] -rw------- 1 boinc boinc 622 Dec 10 08:36 mq6MDmOPXW4n7Olcko1bjSoqABFKDmABFKDmyeZQDmrmHKDmcxwJXn.diag [2023-12-10 08:36:46] -rw-r--r-- 1 boinc boinc 23323 Dec 10 08:36 stderr.txt [2023-12-10 08:36:46] HITS file was successfully produced: [2023-12-10 08:36:46] -rw------- 1 boinc boinc 1395214 Dec 10 08:29 shared/HITS.pool.root.1 [2023-12-10 08:36:46] *** Contents of shared directory: *** [2023-12-10 08:36:46] total 40384 [2023-12-10 08:36:46] -rw-r--r-- 2 boinc boinc 37738636 Dec 10 08:15 ATLAS.root_0 [2023-12-10 08:36:46] -rw-r--r-- 2 boinc boinc 17618 Dec 10 08:15 start_atlas.sh [2023-12-10 08:36:46] -rw-r--r-- 2 boinc boinc 452843 Dec 10 08:15 input.tar.gz [2023-12-10 08:36:46] -rw------- 1 boinc boinc 1395214 Dec 10 08:29 HITS.pool.root.1 [2023-12-10 08:36:46] -rw------- 1 boinc boinc 1740800 Dec 10 08:36 result.tar.gz 08:36:47 (2629486): run_atlas exited; CPU time 162.019355 08:36:47 (2629486): called boinc_finish(0) </stderr_txt> ]]>
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