Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
01:37:08 (29701): wrapper (7.7.26015): starting
01:37:08 (29701): wrapper: running run_atlas (--nthreads 1)
[2023-12-13 01:37:08] Arguments: --nthreads 1
[2023-12-13 01:37:08] Threads: 1
[2023-12-13 01:37:08] Checking for CVMFS
[2023-12-13 01:37:08] Probing /cvmfs/atlas.cern.ch... OK
[2023-12-13 01:37:08] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-12-13 01:37:08] Running cvmfs_config stat atlas.cern.ch
[2023-12-13 01:37:09] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-12-13 01:37:09] 2.6.3.0 31940 102 45696 126962 1 66 2719674 2816001 0 65024 0 198003 99.6051 41015 648 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-12-13 01:37:09] CVMFS is ok
[2023-12-13 01:37:09] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-12-13 01:37:09] Checking for apptainer binary...
[2023-12-13 01:37:09] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-12-13 01:37:09] apptainer is not installed, using version from CVMFS
[2023-12-13 01:37:09] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-12-13 01:37:11] HPi7COS7
[2023-12-13 01:37:11] apptainer works
[2023-12-13 01:37:11] Starting ATLAS job with PandaID=6049379079
[2023-12-13 01:37:11] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-12-13 02:16:52]  *** The last 200 lines of the pilot log: ***
[2023-12-13 02:16:52] 2023-12-13 01:15:46,648 | WARNING  | aborting job monitor tasks since payload process 8068 is not running
[2023-12-13 02:16:52] 2023-12-13 01:15:49,158 | INFO     | monitor loop #312: job 0:6049379079 is in state 'stageout'
[2023-12-13 02:16:52] 2023-12-13 01:15:49,159 | WARNING  | aborting job monitor tasks since payload process 8068 is not running
[2023-12-13 02:16:52] 2023-12-13 01:15:51,674 | INFO     | monitor loop #313: job 0:6049379079 is in state 'stageout'
[2023-12-13 02:16:52] 2023-12-13 01:15:51,674 | WARNING  | aborting job monitor tasks since payload process 8068 is not running
[2023-12-13 02:16:52] 2023-12-13 01:15:54,196 | INFO     | monitor loop #314: job 0:6049379079 is in state 'stageout'
[2023-12-13 02:16:52] 2023-12-13 01:15:54,196 | WARNING  | aborting job monitor tasks since payload process 8068 is not running
[2023-12-13 02:16:52] 2023-12-13 01:15:55,918 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-12-13 02:16:52] 2023-12-13 01:15:56,098 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-12-13 02:16:52] 2023-12-13 01:15:56,099 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2023-12-13 02:16:52] 2023-12-13 01:15:56,228 | INFO     | transferring file f33decfd-dbf8-40d9-8124-3068a301a59a_61749.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-6049379079/f33decfd-dbf8-40d9-8124-3068a301a59a_
[2023-12-13 02:16:52] 2023-12-13 01:15:56,228 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6049379079/f33decfd-dbf8-40d9-8124-3068a301a59a_61749.1.job.log.tgz /var/lib/boinc/slots/0/f3
[2023-12-13 02:16:52] 2023-12-13 01:15:56,472 | INFO     | Adding to output.list: f33decfd-dbf8-40d9-8124-3068a301a59a_61749.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/6c/12/f33decfd-dbf8-
[2023-12-13 02:16:52] 2023-12-13 01:15:56,473 | INFO     | summary of transferred files:
[2023-12-13 02:16:52] 2023-12-13 01:15:56,473 | INFO     |  -- lfn=f33decfd-dbf8-40d9-8124-3068a301a59a_61749.1.job.log.tgz, status_code=0, status=transferred
[2023-12-13 02:16:52] 2023-12-13 01:15:56,474 | INFO     | stage-out finished correctly
[2023-12-13 02:16:52] 2023-12-13 01:15:56,713 | INFO     | monitor loop #315: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:15:56,714 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:15:59,223 | INFO     | monitor loop #316: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:15:59,223 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:00,123 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-12-13 02:16:52] 2023-12-13 01:16:01,729 | INFO     | job 6049379079 has state=finished
[2023-12-13 02:16:52] 2023-12-13 01:16:01,730 | INFO     | preparing for final server update for job 6049379079 in state='finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:01,730 | INFO     | this job has now completed (state=finished)
[2023-12-13 02:16:52] 2023-12-13 01:16:01,730 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-12-13 02:16:52] 2023-12-13 01:16:01,730 | INFO     | job 6049379079 has finished - writing final server update
[2023-12-13 02:16:52] 2023-12-13 01:16:01,731 | INFO     | total number of processed events: 2 (read)
[2023-12-13 02:16:52] 2023-12-13 01:16:01,733 | INFO     | executing command: lscpu
[2023-12-13 02:16:52] 2023-12-13 01:16:01,762 | INFO     | monitor loop #317: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:01,764 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:01,825 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-12-13 02:16:52] 2023-12-13 01:16:01,826 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-12-13 02:16:52] 2023-12-13 01:16:01,970 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-12-13 02:16:52] 2023-12-13 01:16:04,284 | INFO     | monitor loop #318: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:04,284 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:06,794 | INFO     | monitor loop #319: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:06,797 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:09,300 | INFO     | monitor loop #320: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:09,301 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:11,820 | INFO     | monitor loop #321: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:11,821 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:14,353 | INFO     | monitor loop #322: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:14,356 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:16,870 | INFO     | monitor loop #323: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:16,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:19,384 | INFO     | monitor loop #324: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:19,390 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:21,895 | INFO     | monitor loop #325: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:21,902 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:24,418 | INFO     | monitor loop #326: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:24,419 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:26,940 | INFO     | monitor loop #327: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:26,943 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:29,458 | INFO     | monitor loop #328: job 0:6049379079 is in state 'finished'
[2023-12-13 02:16:52] 2023-12-13 01:16:29,460 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 02:16:52] 2023-12-13 01:16:29,707 | INFO     | CPU arch script returned: x86-64-v2
[2023-12-13 02:16:52] 2023-12-13 01:16:29,708 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6049379079/memory_monitor_summary.json (trf name=prmon)
[2023-12-13 02:16:52] 2023-12-13 01:16:29,710 | INFO     | extracted standard info from prmon json
[2023-12-13 02:16:52] 2023-12-13 01:16:29,710 | INFO     | extracted standard memory fields from prmon json
[2023-12-13 02:16:52] 2023-12-13 01:16:29,712 | INFO     | fitting pss+swap vs Time
[2023-12-13 02:16:52] 2023-12-13 01:16:29,712 | INFO     | current memory leak: 337.51 B/s (using 20 data points, chi2=0.20)
[2023-12-13 02:16:52] 2023-12-13 01:16:29,713 | INFO     | ..............................
[2023-12-13 02:16:52] 2023-12-13 01:16:29,713 | INFO     | . Timing measurements:
[2023-12-13 02:16:52] 2023-12-13 01:16:29,713 | INFO     | . get job = 49 s
[2023-12-13 02:16:52] 2023-12-13 01:16:29,713 | INFO     | . initial setup = 62 s
[2023-12-13 02:16:52] 2023-12-13 01:16:29,713 | INFO     | . payload setup = 28 s
[2023-12-13 02:16:52] 2023-12-13 01:16:29,714 | INFO     | . stage-in = 43 s
[2023-12-13 02:16:52] 2023-12-13 01:16:29,714 | INFO     | . payload execution = 1631 s
[2023-12-13 02:16:52] 2023-12-13 01:16:29,714 | INFO     | . stage-out = 439 s
[2023-12-13 02:16:52] 2023-12-13 01:16:29,714 | INFO     | . log creation = 0 s
[2023-12-13 02:16:52] 2023-12-13 01:16:29,714 | INFO     | ..............................
[2023-12-13 02:16:52] 2023-12-13 01:16:30,072 | INFO     | 
[2023-12-13 02:16:52] 2023-12-13 01:16:30,074 | INFO     | job summary report
[2023-12-13 02:16:52] 2023-12-13 01:16:30,076 | INFO     | --------------------------------------------------
[2023-12-13 02:16:52] 2023-12-13 01:16:30,078 | INFO     | PanDA job id: 6049379079
[2023-12-13 02:16:52] 2023-12-13 01:16:30,080 | INFO     | task id: NULL
[2023-12-13 02:16:52] 2023-12-13 01:16:30,082 | INFO     | errors: (none)
[2023-12-13 02:16:52] 2023-12-13 01:16:30,085 | INFO     | status: LOG_TRANSFER = DONE 
[2023-12-13 02:16:52] 2023-12-13 01:16:30,087 | INFO     | pilot state: finished 
[2023-12-13 02:16:52] 2023-12-13 01:16:30,089 | INFO     | transexitcode: 0
[2023-12-13 02:16:52] 2023-12-13 01:16:30,092 | INFO     | exeerrorcode: 0
[2023-12-13 02:16:52] 2023-12-13 01:16:30,095 | INFO     | exeerrordiag: 
[2023-12-13 02:16:52] 2023-12-13 01:16:30,098 | INFO     | exitcode: 0
[2023-12-13 02:16:52] 2023-12-13 01:16:30,100 | INFO     | exitmsg: OK
[2023-12-13 02:16:52] 2023-12-13 01:16:30,100 | INFO     | cpuconsumptiontime: 1467 s
[2023-12-13 02:16:52] 2023-12-13 01:16:30,100 | INFO     | nevents: 2
[2023-12-13 02:16:52] 2023-12-13 01:16:30,100 | INFO     | neventsw: 0
[2023-12-13 02:16:52] 2023-12-13 01:16:30,101 | INFO     | pid: 8068
[2023-12-13 02:16:52] 2023-12-13 01:16:30,101 | INFO     | pgrp: 8068
[2023-12-13 02:16:52] 2023-12-13 01:16:30,101 | INFO     | corecount: 1
[2023-12-13 02:16:52] 2023-12-13 01:16:30,102 | INFO     | event service: False
[2023-12-13 02:16:52] 2023-12-13 01:16:30,102 | INFO     | sizes: {0: 2429934, 1: 2430133, 12: 2430133, 23: 2430307, 34: 2430335, 44: 2430363, 55: 2430519, 61: 2430607, 66: 2430635, 1664: 2451958, 2105: 2461008, 2108: 2461
[2023-12-13 02:16:52] 2023-12-13 01:16:30,102 | INFO     | --------------------------------------------------
[2023-12-13 02:16:52] 2023-12-13 01:16:30,103 | INFO     | 
[2023-12-13 02:16:52] 2023-12-13 01:16:30,103 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2023-12-13 02:16:52] 2023-12-13 01:16:30,174 | INFO     | queue jobs had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,174 | INFO     | queue payloads had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue data_in had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue data_out had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,175 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue completed_jobids has 1 job(s)
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,176 | INFO     | queue messages had 0 job(s) [purged]
[2023-12-13 02:16:52] 2023-12-13 01:16:30,177 | INFO     | job 6049379079 has completed (purged errors)
[2023-12-13 02:16:52] 2023-12-13 01:16:30,177 | INFO     | overall cleanup function is called
[2023-12-13 02:16:52] 2023-12-13 01:16:31,193 | INFO     | --- collectZombieJob: --- 10, [8068]
[2023-12-13 02:16:52] 2023-12-13 01:16:31,194 | INFO     | zombie collector waiting for pid 8068
[2023-12-13 02:16:52] 2023-12-13 01:16:31,194 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-12-13 02:16:52] 2023-12-13 01:16:32,217 | INFO     | collected zombie processes
[2023-12-13 02:16:52] 2023-12-13 01:16:32,219 | INFO     | will now attempt to kill all subprocesses of pid=8068
[2023-12-13 02:16:52] 2023-12-13 01:16:32,433 | INFO     | process IDs to be killed: [8068] (in reverse order)
[2023-12-13 02:16:52] 2023-12-13 01:16:32,616 | WARNING  | found no corresponding commands to process id(s)
[2023-12-13 02:16:52] 2023-12-13 01:16:32,619 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-12-13 02:16:52] 2023-12-13 01:16:32,621 | INFO     | did not find any defunct processes belonging to 8068
[2023-12-13 02:16:52] 2023-12-13 01:16:32,623 | INFO     | did not find any defunct processes belonging to 8068
[2023-12-13 02:16:52] 2023-12-13 01:16:32,624 | INFO     | ready for new job
[2023-12-13 02:16:52] 2023-12-13 01:16:32,624 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-12-13 02:16:52] 2023-12-13 01:16:32,625 | INFO     | **************************************
[2023-12-13 02:16:52] 2023-12-13 01:16:32,626 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2023-12-13 02:16:52] 2023-12-13 01:16:32,626 | INFO     | **************************************
[2023-12-13 02:16:52] 2023-12-13 01:16:32,626 | INFO     | 
[2023-12-13 02:16:52] 2023-12-13 01:16:32,626 | INFO     | pilot is running in a VM
[2023-12-13 02:16:52] 2023-12-13 01:16:32,626 | INFO     | architecture information:
[2023-12-13 02:16:52] 2023-12-13 01:16:32,627 | INFO     | executing command: cat /etc/os-release
[2023-12-13 02:16:52] 2023-12-13 01:16:32,733 | INFO     | cat /etc/os-release:
[2023-12-13 02:16:52] NAME="CentOS Linux"
[2023-12-13 02:16:52] VERSION="7 (Core)"
[2023-12-13 02:16:52] ID="centos"
[2023-12-13 02:16:52] ID_LIKE="rhel fedora"
[2023-12-13 02:16:52] VERSION_ID="7"
[2023-12-13 02:16:52] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-12-13 02:16:52] ANSI_COLOR="0;31"
[2023-12-13 02:16:52] CPE_NAME="cpe:/o:centos:centos:7"
[2023-12-13 02:16:52] HOME_URL="https://www.centos.org/"
[2023-12-13 02:16:52] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-12-13 02:16:52] 
[2023-12-13 02:16:52] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-12-13 02:16:52] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-12-13 02:16:52] REDHAT_SUPPORT_PRODUCT="centos"
[2023-12-13 02:16:52] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-12-13 02:16:52] 
[2023-12-13 02:16:52] 2023-12-13 01:16:32,733 | INFO     | **************************************
[2023-12-13 02:16:52] 2023-12-13 01:16:33,247 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-12-13 02:16:52] 2023-12-13 01:16:33,306 | INFO     | sufficient remaining disk space (10759438336 B)
[2023-12-13 02:16:52] 2023-12-13 01:16:33,307 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-12-13 02:16:52] 2023-12-13 01:16:33,307 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-12-13 02:16:52] 2023-12-13 01:16:33,307 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-12-13 02:16:52] 2023-12-13 01:16:33,308 | INFO     | aborting loop
[2023-12-13 02:16:52] 2023-12-13 01:16:33,308 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-12-13 02:16:52] 2023-12-13 01:16:33,500 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-12-13 02:16:52] 2023-12-13 01:16:34,190 | INFO     | found 0 job(s) in 20 queues
[2023-12-13 02:16:52] 2023-12-13 01:16:34,190 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-12-13 02:16:52] 2023-12-13 01:16:34,191 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-12-13 02:16:52] 2023-12-13 01:16:34,313 | INFO     | [job] retrieve thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,315 | INFO     | [job] job monitor thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,412 | INFO     | [payload] control thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,480 | INFO     | [payload] validate_post thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,515 | INFO     | [data] copytool_in thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,525 | INFO     | [job] create_data_payload thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,638 | INFO     | [payload] execute_payloads thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,723 | INFO     | [job] control thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,910 | INFO     | [data] control thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:34,958 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-12-13 02:16:52] 2023-12-13 01:16:35,054 | INFO     | [payload] validate_pre thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:35,326 | INFO     | [data] copytool_out thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:35,550 | INFO     | [job] validate thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:35,647 | INFO     | [payload] failed_post thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:35,969 | INFO     | [job] queue monitor thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:37,526 | INFO     | [data] queue_monitor thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:43,935 | INFO     | job.realtimelogging is not enabled
[2023-12-13 02:16:52] 2023-12-13 01:16:44,942 | INFO     | [payload] run_realtimelog thread has finished
[2023-12-13 02:16:52] 2023-12-13 01:16:45,465 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139891887163200)>', '<ExcThread(monitor, started 139891614660352)>']
[2023-12-13 02:16:52] 2023-12-13 01:16:46,321 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-12-13 02:16:52] 2023-12-13 01:16:46,322 | INFO     | [monitor] control thread has ended
[2023-12-13 02:16:52] 2023-12-13 01:16:50,492 | INFO     | end of generic workflow (traces error code: 0)
[2023-12-13 02:16:52] 2023-12-13 01:16:50,494 | INFO     | traces error code: 0
[2023-12-13 02:16:52] 2023-12-13 01:16:50,495 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-12-13 02:16:52] 2023-12-13 01:16:50,728 [wrapper] ==== pilot stdout END ====
[2023-12-13 02:16:52] 2023-12-13 01:16:50,757 [wrapper] ==== wrapper stdout RESUME ====
[2023-12-13 02:16:52] 2023-12-13 01:16:50,768 [wrapper] pilotpid: 922
[2023-12-13 02:16:52] 2023-12-13 01:16:50,817 [wrapper] Pilot exit status: 0
[2023-12-13 02:16:52] 2023-12-13 01:16:50,867 [wrapper] pandaids: 6049379079
[2023-12-13 02:16:52] 2023-12-13 01:16:50,893 [wrapper] apfmon messages muted
[2023-12-13 02:16:52] 2023-12-13 01:16:50,911 [wrapper] Test setup, not cleaning
[2023-12-13 02:16:52] 2023-12-13 01:16:50,972 [wrapper] ==== wrapper stdout END ====
[2023-12-13 02:16:52] 2023-12-13 01:16:51,005 [wrapper] ==== wrapper stderr END ====
[2023-12-13 02:16:52] 2023-12-13 01:16:51,021 [wrapper] wrapperexiting ec=0, duration=2379
[2023-12-13 02:16:52] 2023-12-13 01:16:51,044 [wrapper] apfmon messages muted
[2023-12-13 02:16:52]  *** Error codes and diagnostics ***
[2023-12-13 02:16:52]     "exeErrorCode": 0,
[2023-12-13 02:16:52]     "exeErrorDiag": "",
[2023-12-13 02:16:52]     "pilotErrorCode": 0,
[2023-12-13 02:16:52]     "pilotErrorDiag": "",
[2023-12-13 02:16:52]  *** Listing of results directory ***
[2023-12-13 02:16:52] insgesamt 45680
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc   441289 13. Dez 00:43 pilot3.tar.gz
[2023-12-13 02:16:52] -rwx------. 1 boinc boinc    27439 13. Dez 00:50 runpilot2-wrapper.sh
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc     4388 13. Dez 00:50 queuedata.json
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc      107 13. Dez 01:37 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-13 02:16:52] -rwxr-xr-x. 1 boinc boinc     7986 13. Dez 01:37 run_atlas
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc      112 13. Dez 01:37 job.xml
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc     6046 13. Dez 01:37 init_data.xml
[2023-12-13 02:16:52] -rw-r--r--. 2 boinc boinc 38971704 13. Dez 01:37 EVNT.04972714._000035.pool.root.1
[2023-12-13 02:16:52] -rw-r--r--. 2 boinc boinc   452881 13. Dez 01:37 input.tar.gz
[2023-12-13 02:16:52] -rw-r--r--. 2 boinc boinc    17618 13. Dez 01:37 start_atlas.sh
[2023-12-13 02:16:52] drwxrwx--x. 2 boinc boinc       68 13. Dez 01:37 shared
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc        0 13. Dez 01:37 boinc_lockfile
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc     2752 13. Dez 01:37 pandaJob.out
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc      424 13. Dez 01:37 setup.sh.local
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc  1358245 13. Dez 01:38 cric_ddmendpoints.json
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc   978408 13. Dez 01:38 agis_schedconf.cvmfs.json
[2023-12-13 02:16:52] drwx------. 4 boinc boinc     4096 13. Dez 01:39 pilot3
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc  1776878 13. Dez 02:08 output.1.f33decfd-dbf8-40d9-8124-3068a301a59a_61749.pool.root
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc      534 13. Dez 02:08 boinc_task_state.xml
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc     1020 13. Dez 02:08 memory_monitor_summary.json
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc   166781 13. Dez 02:11 f33decfd-dbf8-40d9-8124-3068a301a59a_61749.1.job.log.tgz
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc       26 13. Dez 02:16 wrapper_checkpoint.txt
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc     8192 13. Dez 02:16 boinc_mmap_file
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc     7445 13. Dez 02:16 heartbeat.json
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc     4035 13. Dez 02:16 pilotlog.txt
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc   240422 13. Dez 02:16 f33decfd-dbf8-40d9-8124-3068a301a59a_61749.1.job.log
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc      464 13. Dez 02:16 output.list
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc      748 13. Dez 02:16 runtime_log
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc  2201600 13. Dez 02:16 result.tar.gz
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc    11836 13. Dez 02:16 runtime_log.err
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc      635 13. Dez 02:16 lqwLDm8gRX4n7Olcko1bjSoqABFKDmABFKDmyeZQDmOrHKDmRecfKn.diag
[2023-12-13 02:16:52] -rw-r--r--. 1 boinc boinc    22817 13. Dez 02:16 stderr.txt
[2023-12-13 02:16:52] HITS file was successfully produced:
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc 1776878 13. Dez 02:08 shared/HITS.pool.root.1
[2023-12-13 02:16:52]  *** Contents of shared directory: ***
[2023-12-13 02:16:52] insgesamt 42412
[2023-12-13 02:16:52] -rw-r--r--. 2 boinc boinc 38971704 13. Dez 01:37 ATLAS.root_0
[2023-12-13 02:16:52] -rw-r--r--. 2 boinc boinc   452881 13. Dez 01:37 input.tar.gz
[2023-12-13 02:16:52] -rw-r--r--. 2 boinc boinc    17618 13. Dez 01:37 start_atlas.sh
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc  1776878 13. Dez 02:08 HITS.pool.root.1
[2023-12-13 02:16:52] -rw-------. 1 boinc boinc  2201600 13. Dez 02:16 result.tar.gz
02:16:53 (29701): run_atlas exited; CPU time 1399.410712
02:16:53 (29701): called boinc_finish(0)

</stderr_txt>
]]>

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