Name pCaNDmnxcX4n7Olcko1bjSoqABFKDmABFKDmyeZQDmksHKDmPVxNfm_0
Workunit 2369402
Created 13 Dec 2023, 11:52:18 UTC
Sent 13 Dec 2023, 11:56:24 UTC
Report deadline 20 Dec 2023, 11:56:24 UTC
Received 13 Dec 2023, 12:58:30 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4008
Run time 30 min 54 sec
CPU time 15 min 12 sec
Validate state Valid
Credit 25.28
Device peak FLOPS 3.24 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.42 GB
Peak swap size 3.12 GB
Peak disk usage 81.06 MB

Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
13:27:22 (19542): wrapper (7.7.26015): starting
13:27:22 (19542): wrapper: running run_atlas (--nthreads 1)
[2023-12-13 13:27:22] Arguments: --nthreads 1
[2023-12-13 13:27:22] Threads: 1
[2023-12-13 13:27:22] Checking for CVMFS
[2023-12-13 13:27:22] Probing /cvmfs/atlas.cern.ch... OK
[2023-12-13 13:27:22] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-12-13 13:27:22] Running cvmfs_config stat atlas.cern.ch
[2023-12-13 13:27:23] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-12-13 13:27:23] 2.6.3.0 31049 31 38588 126980 0 66 2315093 2816000 0 65024 0 63238 99.5762 80118 1251 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-12-13 13:27:23] CVMFS is ok
[2023-12-13 13:27:23] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-12-13 13:27:23] Checking for apptainer binary...
[2023-12-13 13:27:23] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-12-13 13:27:23] apptainer is not installed, using version from CVMFS
[2023-12-13 13:27:23] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-12-13 13:27:25] HPi7COS7
[2023-12-13 13:27:25] apptainer works
[2023-12-13 13:27:25] Starting ATLAS job with PandaID=6049855819
[2023-12-13 13:27:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-12-13 13:58:13]  *** The last 200 lines of the pilot log: ***
[2023-12-13 13:58:13] 2023-12-13 12:57:11,521 | INFO     | monitor loop #245: job 0:6049855819 is in state 'stageout'
[2023-12-13 13:58:13] 2023-12-13 12:57:11,521 | WARNING  | aborting job monitor tasks since payload process 30061 is not running
[2023-12-13 13:58:13] 2023-12-13 12:57:14,033 | INFO     | monitor loop #246: job 0:6049855819 is in state 'stageout'
[2023-12-13 13:58:13] 2023-12-13 12:57:14,033 | WARNING  | aborting job monitor tasks since payload process 30061 is not running
[2023-12-13 13:58:13] 2023-12-13 12:57:16,543 | INFO     | monitor loop #247: job 0:6049855819 is in state 'stageout'
[2023-12-13 13:58:13] 2023-12-13 12:57:16,544 | WARNING  | aborting job monitor tasks since payload process 30061 is not running
[2023-12-13 13:58:13] 2023-12-13 12:57:19,065 | INFO     | monitor loop #248: job 0:6049855819 is in state 'stageout'
[2023-12-13 13:58:13] 2023-12-13 12:57:19,066 | WARNING  | aborting job monitor tasks since payload process 30061 is not running
[2023-12-13 13:58:13] 2023-12-13 12:57:20,898 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-12-13 13:58:13] 2023-12-13 12:57:21,008 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-12-13 13:58:13] 2023-12-13 12:57:21,009 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2023-12-13 13:58:13] 2023-12-13 12:57:21,154 | INFO     | transferring file 11215ee1-0414-4016-97ab-b7d644b39a64_60731.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-6049855819/11215ee1-0414-4016-97ab-b7d644b39a64_
[2023-12-13 13:58:13] 2023-12-13 12:57:21,154 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6049855819/11215ee1-0414-4016-97ab-b7d644b39a64_60731.1.job.log.tgz /var/lib/boinc/slots/0/11
[2023-12-13 13:58:13] 2023-12-13 12:57:21,269 | INFO     | Adding to output.list: 11215ee1-0414-4016-97ab-b7d644b39a64_60731.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/7c/4c/11215ee1-0414-
[2023-12-13 13:58:13] 2023-12-13 12:57:21,272 | INFO     | summary of transferred files:
[2023-12-13 13:58:13] 2023-12-13 12:57:21,273 | INFO     |  -- lfn=11215ee1-0414-4016-97ab-b7d644b39a64_60731.1.job.log.tgz, status_code=0, status=transferred
[2023-12-13 13:58:13] 2023-12-13 12:57:21,274 | INFO     | stage-out finished correctly
[2023-12-13 13:58:13] 2023-12-13 12:57:21,502 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-12-13 13:58:13] 2023-12-13 12:57:21,629 | INFO     | monitor loop #249: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:21,629 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:24,108 | INFO     | job 6049855819 has state=finished
[2023-12-13 13:58:13] 2023-12-13 12:57:24,109 | INFO     | preparing for final server update for job 6049855819 in state='finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:24,113 | INFO     | this job has now completed (state=finished)
[2023-12-13 13:58:13] 2023-12-13 12:57:24,115 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-12-13 13:58:13] 2023-12-13 12:57:24,116 | INFO     | job 6049855819 has finished - writing final server update
[2023-12-13 13:58:13] 2023-12-13 12:57:24,118 | INFO     | total number of processed events: 2 (read)
[2023-12-13 13:58:13] 2023-12-13 12:57:24,136 | INFO     | monitor loop #250: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:24,137 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:24,138 | INFO     | executing command: lscpu
[2023-12-13 13:58:13] 2023-12-13 12:57:24,191 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-12-13 13:58:13] 2023-12-13 12:57:24,191 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-12-13 13:58:13] 2023-12-13 12:57:24,314 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-12-13 13:58:13] 2023-12-13 12:57:26,653 | INFO     | monitor loop #251: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:26,655 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:29,185 | INFO     | monitor loop #252: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:29,185 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:31,694 | INFO     | monitor loop #253: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:31,697 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:34,202 | INFO     | monitor loop #254: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:34,202 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:36,724 | INFO     | monitor loop #255: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:36,729 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:39,235 | INFO     | monitor loop #256: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:39,236 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:41,746 | INFO     | monitor loop #257: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:41,749 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:44,264 | INFO     | monitor loop #258: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:44,268 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:46,785 | INFO     | monitor loop #259: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:46,786 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:49,291 | INFO     | monitor loop #260: job 0:6049855819 is in state 'finished'
[2023-12-13 13:58:13] 2023-12-13 12:57:49,291 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-13 13:58:13] 2023-12-13 12:57:50,803 | INFO     | CPU arch script returned: x86-64-v2
[2023-12-13 13:58:13] 2023-12-13 12:57:50,804 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6049855819/memory_monitor_summary.json (trf name=prmon)
[2023-12-13 13:58:13] 2023-12-13 12:57:50,805 | INFO     | extracted standard info from prmon json
[2023-12-13 13:58:13] 2023-12-13 12:57:50,805 | INFO     | extracted standard memory fields from prmon json
[2023-12-13 13:58:13] 2023-12-13 12:57:50,806 | INFO     | fitting pss+swap vs Time
[2023-12-13 13:58:13] 2023-12-13 12:57:50,806 | INFO     | current memory leak: 876.58 B/s (using 12 data points, chi2=0.09)
[2023-12-13 13:58:13] 2023-12-13 12:57:50,807 | INFO     | ..............................
[2023-12-13 13:58:13] 2023-12-13 12:57:50,807 | INFO     | . Timing measurements:
[2023-12-13 13:58:13] 2023-12-13 12:57:50,807 | INFO     | . get job = 47 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,807 | INFO     | . initial setup = 77 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,807 | INFO     | . payload setup = 30 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,807 | INFO     | . stage-in = 65 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,807 | INFO     | . payload execution = 1137 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,808 | INFO     | . stage-out = 367 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,808 | INFO     | . log creation = 0 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,808 | INFO     | ..............................
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | 
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | job summary report
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | --------------------------------------------------
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | PanDA job id: 6049855819
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | task id: NULL
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | errors: (none)
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | status: LOG_TRANSFER = DONE 
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | pilot state: finished 
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | transexitcode: 0
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | exeerrorcode: 0
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | exeerrordiag: 
[2023-12-13 13:58:13] 2023-12-13 12:57:50,966 | INFO     | exitcode: 0
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | exitmsg: OK
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | cpuconsumptiontime: 965 s
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | nevents: 2
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | neventsw: 0
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | pid: 30061
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | pgrp: 30061
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | corecount: 1
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | event service: False
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | sizes: {0: 2429941, 1: 2430140, 12: 2430140, 23: 2430314, 34: 2430342, 45: 2430370, 56: 2430526, 66: 2430554, 77: 2430582, 83: 2430698, 88: 2430726, 1172: 2452084,
[2023-12-13 13:58:13] 2023-12-13 12:57:50,967 | INFO     | --------------------------------------------------
[2023-12-13 13:58:13] 2023-12-13 12:57:50,968 | INFO     | 
[2023-12-13 13:58:13] 2023-12-13 12:57:50,968 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2023-12-13 13:58:13] 2023-12-13 12:57:51,081 | INFO     | queue jobs had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue payloads had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue data_in had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue data_out had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,082 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue completed_jobids has 1 job(s)
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,083 | INFO     | queue messages had 0 job(s) [purged]
[2023-12-13 13:58:13] 2023-12-13 12:57:51,084 | INFO     | job 6049855819 has completed (purged errors)
[2023-12-13 13:58:13] 2023-12-13 12:57:51,084 | INFO     | overall cleanup function is called
[2023-12-13 13:58:13] 2023-12-13 12:57:52,093 | INFO     | --- collectZombieJob: --- 10, [30061]
[2023-12-13 13:58:13] 2023-12-13 12:57:52,094 | INFO     | zombie collector waiting for pid 30061
[2023-12-13 13:58:13] 2023-12-13 12:57:52,094 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-12-13 13:58:13] 2023-12-13 12:57:53,100 | INFO     | collected zombie processes
[2023-12-13 13:58:13] 2023-12-13 12:57:53,101 | INFO     | will now attempt to kill all subprocesses of pid=30061
[2023-12-13 13:58:13] 2023-12-13 12:57:53,290 | INFO     | 1801s have passed since pilot start
[2023-12-13 13:58:13] 2023-12-13 12:57:53,320 | INFO     | process IDs to be killed: [30061] (in reverse order)
[2023-12-13 13:58:13] 2023-12-13 12:57:53,406 | WARNING  | found no corresponding commands to process id(s)
[2023-12-13 13:58:13] 2023-12-13 12:57:53,406 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-12-13 13:58:13] 2023-12-13 12:57:53,408 | INFO     | did not find any defunct processes belonging to 30061
[2023-12-13 13:58:13] 2023-12-13 12:57:53,410 | INFO     | did not find any defunct processes belonging to 30061
[2023-12-13 13:58:13] 2023-12-13 12:57:53,411 | INFO     | ready for new job
[2023-12-13 13:58:13] 2023-12-13 12:57:53,411 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-12-13 13:58:13] 2023-12-13 12:57:53,414 | INFO     | **************************************
[2023-12-13 13:58:13] 2023-12-13 12:57:53,415 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2023-12-13 13:58:13] 2023-12-13 12:57:53,417 | INFO     | **************************************
[2023-12-13 13:58:13] 2023-12-13 12:57:53,418 | INFO     | 
[2023-12-13 13:58:13] 2023-12-13 12:57:53,420 | INFO     | pilot is running in a VM
[2023-12-13 13:58:13] 2023-12-13 12:57:53,420 | INFO     | architecture information:
[2023-12-13 13:58:13] 2023-12-13 12:57:53,423 | INFO     | executing command: cat /etc/os-release
[2023-12-13 13:58:13] 2023-12-13 12:57:53,506 | INFO     | cat /etc/os-release:
[2023-12-13 13:58:13] NAME="CentOS Linux"
[2023-12-13 13:58:13] VERSION="7 (Core)"
[2023-12-13 13:58:13] ID="centos"
[2023-12-13 13:58:13] ID_LIKE="rhel fedora"
[2023-12-13 13:58:13] VERSION_ID="7"
[2023-12-13 13:58:13] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-12-13 13:58:13] ANSI_COLOR="0;31"
[2023-12-13 13:58:13] CPE_NAME="cpe:/o:centos:centos:7"
[2023-12-13 13:58:13] HOME_URL="https://www.centos.org/"
[2023-12-13 13:58:13] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-12-13 13:58:13] 
[2023-12-13 13:58:13] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-12-13 13:58:13] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-12-13 13:58:13] REDHAT_SUPPORT_PRODUCT="centos"
[2023-12-13 13:58:13] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-12-13 13:58:13] 
[2023-12-13 13:58:13] 2023-12-13 12:57:53,506 | INFO     | **************************************
[2023-12-13 13:58:13] 2023-12-13 12:57:54,008 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-12-13 13:58:13] 2023-12-13 12:57:54,050 | INFO     | sufficient remaining disk space (11186208768 B)
[2023-12-13 13:58:13] 2023-12-13 12:57:54,050 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-12-13 13:58:13] 2023-12-13 12:57:54,051 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-12-13 13:58:13] 2023-12-13 12:57:54,309 | INFO     | found 0 job(s) in 20 queues
[2023-12-13 13:58:13] 2023-12-13 12:57:54,310 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-12-13 13:58:13] 2023-12-13 12:57:54,310 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-12-13 13:58:13] 2023-12-13 12:57:54,317 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2023-12-13 13:58:13] 2023-12-13 12:57:54,317 | WARNING  | cannot recover job monitoring - aborting pilot
[2023-12-13 13:58:13] 2023-12-13 12:57:54,317 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-12-13 13:58:13] 2023-12-13 12:57:54,317 | INFO     | will abort loop
[2023-12-13 13:58:13] 2023-12-13 12:57:54,688 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-12-13 13:58:13] 2023-12-13 12:57:54,839 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-12-13 13:58:13] 2023-12-13 12:57:55,064 | INFO     | [job] retrieve thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:55,299 | INFO     | [job] create_data_payload thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:55,328 | INFO     | [job] job monitor thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:55,496 | INFO     | [job] control thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:55,613 | INFO     | [data] control thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,023 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-12-13 13:58:13] 2023-12-13 12:57:56,110 | INFO     | [payload] control thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,258 | INFO     | [payload] validate_post thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,381 | INFO     | [data] copytool_in thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,381 | INFO     | [payload] execute_payloads thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,431 | INFO     | [job] validate thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,434 | INFO     | [payload] validate_pre thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,479 | INFO     | [payload] failed_post thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:56,697 | INFO     | [data] copytool_out thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:57,036 | INFO     | [job] queue monitor thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:57:58,886 | INFO     | [data] queue_monitor thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:58:04,330 | INFO     | job.realtimelogging is not enabled
[2023-12-13 13:58:13] 2023-12-13 12:58:05,346 | INFO     | [payload] run_realtimelog thread has finished
[2023-12-13 13:58:13] 2023-12-13 12:58:07,337 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140713606285120)>', '<ExcThread(monitor, started 140713027155712)>']
[2023-12-13 13:58:13] 2023-12-13 12:58:07,474 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-12-13 13:58:13] 2023-12-13 12:58:07,476 | INFO     | [monitor] control thread has ended
[2023-12-13 13:58:13] 2023-12-13 12:58:12,383 | INFO     | end of generic workflow (traces error code: 0)
[2023-12-13 13:58:13] 2023-12-13 12:58:12,385 | INFO     | traces error code: 0
[2023-12-13 13:58:13] 2023-12-13 12:58:12,386 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-12-13 13:58:13] 2023-12-13 12:58:12,602 [wrapper] ==== pilot stdout END ====
[2023-12-13 13:58:13] 2023-12-13 12:58:12,618 [wrapper] ==== wrapper stdout RESUME ====
[2023-12-13 13:58:13] 2023-12-13 12:58:12,649 [wrapper] pilotpid: 23126
[2023-12-13 13:58:13] 2023-12-13 12:58:12,674 [wrapper] Pilot exit status: 0
[2023-12-13 13:58:13] 2023-12-13 12:58:12,747 [wrapper] pandaids: 6049855819
[2023-12-13 13:58:13] 2023-12-13 12:58:12,778 [wrapper] apfmon messages muted
[2023-12-13 13:58:13] 2023-12-13 12:58:12,788 [wrapper] Test setup, not cleaning
[2023-12-13 13:58:13] 2023-12-13 12:58:12,806 [wrapper] ==== wrapper stdout END ====
[2023-12-13 13:58:13] 2023-12-13 12:58:12,812 [wrapper] ==== wrapper stderr END ====
[2023-12-13 13:58:13] 2023-12-13 12:58:12,846 [wrapper] wrapperexiting ec=0, duration=1846
[2023-12-13 13:58:13] 2023-12-13 12:58:12,870 [wrapper] apfmon messages muted
[2023-12-13 13:58:13]  *** Error codes and diagnostics ***
[2023-12-13 13:58:13]     "exeErrorCode": 0,
[2023-12-13 13:58:13]     "exeErrorDiag": "",
[2023-12-13 13:58:13]     "pilotErrorCode": 0,
[2023-12-13 13:58:13]     "pilotErrorDiag": "",
[2023-12-13 13:58:13]  *** Listing of results directory ***
[2023-12-13 13:58:13] insgesamt 43744
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc   441289 13. Dez 12:36 pilot3.tar.gz
[2023-12-13 13:58:13] -rwx------. 1 boinc boinc    27439 13. Dez 12:52 runpilot2-wrapper.sh
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc     4388 13. Dez 12:52 queuedata.json
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc      107 13. Dez 13:27 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-13 13:58:13] -rwxr-xr-x. 1 boinc boinc     7986 13. Dez 13:27 run_atlas
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc      112 13. Dez 13:27 job.xml
[2023-12-13 13:58:13] -rw-r--r--. 2 boinc boinc    17618 13. Dez 13:27 start_atlas.sh
[2023-12-13 13:58:13] drwxrwx--x. 2 boinc boinc       68 13. Dez 13:27 shared
[2023-12-13 13:58:13] -rw-r--r--. 2 boinc boinc   452878 13. Dez 13:27 input.tar.gz
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc     6047 13. Dez 13:27 init_data.xml
[2023-12-13 13:58:13] -rw-r--r--. 2 boinc boinc 37960264 13. Dez 13:27 EVNT.04972714._000040.pool.root.1
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc        0 13. Dez 13:27 boinc_lockfile
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc     2757 13. Dez 13:27 pandaJob.out
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc      424 13. Dez 13:27 setup.sh.local
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc  1358245 13. Dez 13:29 cric_ddmendpoints.json
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc   978072 13. Dez 13:29 agis_schedconf.cvmfs.json
[2023-12-13 13:58:13] drwx------. 4 boinc boinc     4096 13. Dez 13:29 pilot3
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc  1331839 13. Dez 13:50 output.1.11215ee1-0414-4016-97ab-b7d644b39a64_60731.pool.root
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc     1018 13. Dez 13:51 memory_monitor_summary.json
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc      533 13. Dez 13:51 boinc_task_state.xml
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc   164601 13. Dez 13:53 11215ee1-0414-4016-97ab-b7d644b39a64_60731.1.job.log.tgz
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc     7425 13. Dez 13:57 heartbeat.json
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc       25 13. Dez 13:58 wrapper_checkpoint.txt
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc     4221 13. Dez 13:58 pilotlog.txt
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc     8192 13. Dez 13:58 boinc_mmap_file
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc   196851 13. Dez 13:58 11215ee1-0414-4016-97ab-b7d644b39a64_60731.1.job.log
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc      464 13. Dez 13:58 output.list
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc      748 13. Dez 13:58 runtime_log
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc  1710080 13. Dez 13:58 result.tar.gz
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc    11856 13. Dez 13:58 runtime_log.err
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc      634 13. Dez 13:58 pCaNDmnxcX4n7Olcko1bjSoqABFKDmABFKDmyeZQDmksHKDmPVxNfm.diag
[2023-12-13 13:58:13] -rw-r--r--. 1 boinc boinc    22758 13. Dez 13:58 stderr.txt
[2023-12-13 13:58:13] HITS file was successfully produced:
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc 1331839 13. Dez 13:50 shared/HITS.pool.root.1
[2023-12-13 13:58:13]  *** Contents of shared directory: ***
[2023-12-13 13:58:13] insgesamt 40512
[2023-12-13 13:58:13] -rw-r--r--. 2 boinc boinc    17618 13. Dez 13:27 start_atlas.sh
[2023-12-13 13:58:13] -rw-r--r--. 2 boinc boinc   452878 13. Dez 13:27 input.tar.gz
[2023-12-13 13:58:13] -rw-r--r--. 2 boinc boinc 37960264 13. Dez 13:27 ATLAS.root_0
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc  1331839 13. Dez 13:50 HITS.pool.root.1
[2023-12-13 13:58:13] -rw-------. 1 boinc boinc  1710080 13. Dez 13:58 result.tar.gz
13:58:15 (19542): run_atlas exited; CPU time 912.792138
13:58:15 (19542): called boinc_finish(0)

</stderr_txt>
]]>


©2024 CERN