Name pLCLDma3qY4n7Olcko1bjSoqABFKDmABFKDmyeZQDmy0HKDmatKjSm_0
Workunit 2370225
Created 16 Dec 2023, 21:07:17 UTC
Sent 16 Dec 2023, 21:10:12 UTC
Report deadline 23 Dec 2023, 21:10:12 UTC
Received 16 Dec 2023, 21:44:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 4008
Run time 33 min 43 sec
CPU time 17 min 5 sec
Validate state Valid
Credit 27.42
Device peak FLOPS 3.24 GFLOPS
Application version ATLAS Simulation v3.01 (native_mt)
x86_64-pc-linux-gnu
Peak working set size 1.40 GB
Peak swap size 2.14 GB
Peak disk usage 80.82 MB

Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
22:10:23 (14132): wrapper (7.7.26015): starting
22:10:23 (14132): wrapper: running run_atlas (--nthreads 1)
[2023-12-16 22:10:23] Arguments: --nthreads 1
[2023-12-16 22:10:23] Threads: 1
[2023-12-16 22:10:23] Checking for CVMFS
[2023-12-16 22:10:26] Probing /cvmfs/atlas.cern.ch... OK
[2023-12-16 22:10:27] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-12-16 22:10:27] Running cvmfs_config stat atlas.cern.ch
[2023-12-16 22:10:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-12-16 22:10:28] 2.6.3.0 14376 0 28448 127117 3 1 2401222 2816000 0 65024 0 0 n/a 962 1121 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-12-16 22:10:28] CVMFS is ok
[2023-12-16 22:10:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-12-16 22:10:28] Checking for apptainer binary...
[2023-12-16 22:10:28] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-12-16 22:10:28] apptainer is not installed, using version from CVMFS
[2023-12-16 22:10:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-12-16 22:10:29] HPi7COS7
[2023-12-16 22:10:29] apptainer works
[2023-12-16 22:10:29] Starting ATLAS job with PandaID=6052607152
[2023-12-16 22:10:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-12-16 22:44:03]  *** The last 200 lines of the pilot log: ***
[2023-12-16 22:44:03] 2023-12-16 21:42:58,739 | INFO     | monitor loop #266: job 0:6052607152 is in state 'stageout'
[2023-12-16 22:44:03] 2023-12-16 21:42:58,740 | WARNING  | aborting job monitor tasks since payload process 25306 is not running
[2023-12-16 22:44:03] 2023-12-16 21:43:01,249 | INFO     | monitor loop #267: job 0:6052607152 is in state 'stageout'
[2023-12-16 22:44:03] 2023-12-16 21:43:01,250 | WARNING  | aborting job monitor tasks since payload process 25306 is not running
[2023-12-16 22:44:03] 2023-12-16 21:43:03,775 | INFO     | monitor loop #268: job 0:6052607152 is in state 'stageout'
[2023-12-16 22:44:03] 2023-12-16 21:43:03,776 | WARNING  | aborting job monitor tasks since payload process 25306 is not running
[2023-12-16 22:44:03] 2023-12-16 21:43:06,280 | INFO     | monitor loop #269: job 0:6052607152 is in state 'stageout'
[2023-12-16 22:44:03] 2023-12-16 21:43:06,281 | WARNING  | aborting job monitor tasks since payload process 25306 is not running
[2023-12-16 22:44:03] 2023-12-16 21:43:08,794 | INFO     | monitor loop #270: job 0:6052607152 is in state 'stageout'
[2023-12-16 22:44:03] 2023-12-16 21:43:08,794 | WARNING  | aborting job monitor tasks since payload process 25306 is not running
[2023-12-16 22:44:03] 2023-12-16 21:43:11,305 | INFO     | monitor loop #271: job 0:6052607152 is in state 'stageout'
[2023-12-16 22:44:03] 2023-12-16 21:43:11,306 | WARNING  | aborting job monitor tasks since payload process 25306 is not running
[2023-12-16 22:44:03] 2023-12-16 21:43:13,816 | INFO     | monitor loop #272: job 0:6052607152 is in state 'stageout'
[2023-12-16 22:44:03] 2023-12-16 21:43:13,817 | WARNING  | aborting job monitor tasks since payload process 25306 is not running
[2023-12-16 22:44:03] 2023-12-16 21:43:15,094 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2023-12-16 22:44:03] 2023-12-16 21:43:15,540 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2023-12-16 22:44:03] 2023-12-16 21:43:15,541 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2023-12-16 22:44:03] 2023-12-16 21:43:15,681 | INFO     | transferring file a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_14491.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-6052607152/a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_
[2023-12-16 22:44:03] 2023-12-16 21:43:15,681 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6052607152/a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_14491.1.job.log.tgz /var/lib/boinc/slots/0/a2
[2023-12-16 22:44:03] 2023-12-16 21:43:15,754 | INFO     | Adding to output.list: a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_14491.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/cf/eb/a28fe1e4-b830-
[2023-12-16 22:44:03] 2023-12-16 21:43:15,755 | INFO     | summary of transferred files:
[2023-12-16 22:44:03] 2023-12-16 21:43:15,756 | INFO     |  -- lfn=a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_14491.1.job.log.tgz, status_code=0, status=transferred
[2023-12-16 22:44:03] 2023-12-16 21:43:15,756 | INFO     | stage-out finished correctly
[2023-12-16 22:44:03] 2023-12-16 21:43:16,353 | INFO     | monitor loop #273: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:16,354 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:18,639 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2023-12-16 22:44:03] 2023-12-16 21:43:18,880 | INFO     | monitor loop #274: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:18,880 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:20,306 | INFO     | job 6052607152 has state=finished
[2023-12-16 22:44:03] 2023-12-16 21:43:20,307 | INFO     | preparing for final server update for job 6052607152 in state='finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:20,308 | INFO     | this job has now completed (state=finished)
[2023-12-16 22:44:03] 2023-12-16 21:43:20,308 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2023-12-16 22:44:03] 2023-12-16 21:43:20,309 | INFO     | job 6052607152 has finished - writing final server update
[2023-12-16 22:44:03] 2023-12-16 21:43:20,310 | INFO     | total number of processed events: 2 (read)
[2023-12-16 22:44:03] 2023-12-16 21:43:20,360 | INFO     | executing command: lscpu
[2023-12-16 22:44:03] 2023-12-16 21:43:20,506 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2023-12-16 22:44:03] 2023-12-16 21:43:20,507 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2023-12-16 22:44:03] 2023-12-16 21:43:20,650 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2023-12-16 22:44:03] 2023-12-16 21:43:21,400 | INFO     | monitor loop #275: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:21,401 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:23,923 | INFO     | monitor loop #276: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:23,925 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:26,471 | INFO     | monitor loop #277: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:26,487 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:29,021 | INFO     | monitor loop #278: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:29,021 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:31,534 | INFO     | monitor loop #279: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:31,536 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:34,057 | INFO     | monitor loop #280: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:34,064 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:36,576 | INFO     | monitor loop #281: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:36,577 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:39,086 | INFO     | monitor loop #282: job 0:6052607152 is in state 'finished'
[2023-12-16 22:44:03] 2023-12-16 21:43:39,114 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2023-12-16 22:44:03] 2023-12-16 21:43:41,440 | INFO     | CPU arch script returned: x86-64-v2
[2023-12-16 22:44:03] 2023-12-16 21:43:41,441 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6052607152/memory_monitor_summary.json (trf name=prmon)
[2023-12-16 22:44:03] 2023-12-16 21:43:41,444 | INFO     | extracted standard info from prmon json
[2023-12-16 22:44:03] 2023-12-16 21:43:41,445 | INFO     | extracted standard memory fields from prmon json
[2023-12-16 22:44:03] 2023-12-16 21:43:41,448 | INFO     | fitting pss+swap vs Time
[2023-12-16 22:44:03] 2023-12-16 21:43:41,449 | INFO     | current memory leak: 438.62 B/s (using 14 data points, chi2=0.17)
[2023-12-16 22:44:03] 2023-12-16 21:43:41,450 | INFO     | ..............................
[2023-12-16 22:44:03] 2023-12-16 21:43:41,451 | INFO     | . Timing measurements:
[2023-12-16 22:44:03] 2023-12-16 21:43:41,451 | INFO     | . get job = 69 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,451 | INFO     | . initial setup = 70 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,451 | INFO     | . payload setup = 18 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,451 | INFO     | . stage-in = 75 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,451 | INFO     | . payload execution = 1265 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,452 | INFO     | . stage-out = 420 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,452 | INFO     | . log creation = 0 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,452 | INFO     | ..............................
[2023-12-16 22:44:03] 2023-12-16 21:43:41,655 | INFO     | 
[2023-12-16 22:44:03] 2023-12-16 21:43:41,655 | INFO     | job summary report
[2023-12-16 22:44:03] 2023-12-16 21:43:41,655 | INFO     | --------------------------------------------------
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | PanDA job id: 6052607152
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | task id: NULL
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | errors: (none)
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | status: LOG_TRANSFER = DONE 
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | pilot state: finished 
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | transexitcode: 0
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | exeerrorcode: 0
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | exeerrordiag: 
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | exitcode: 0
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | exitmsg: OK
[2023-12-16 22:44:03] 2023-12-16 21:43:41,656 | INFO     | cpuconsumptiontime: 1093 s
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | nevents: 2
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | neventsw: 0
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | pid: 25306
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | pgrp: 25306
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | corecount: 1
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | event service: False
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | sizes: {0: 2429934, 1: 2430133, 2: 2430133, 12: 2430307, 23: 2430335, 34: 2430363, 44: 2430519, 55: 2430547, 66: 2430575, 77: 2430603, 86: 2430719, 87: 2431027, 12
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | --------------------------------------------------
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | 
[2023-12-16 22:44:03] 2023-12-16 21:43:41,657 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2023-12-16 22:44:03] 2023-12-16 21:43:41,749 | INFO     | queue jobs had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,751 | INFO     | queue payloads had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,751 | INFO     | queue data_in had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,751 | INFO     | queue data_out had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,752 | INFO     | queue current_data_in had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,752 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,752 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,752 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,752 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,753 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,753 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,753 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,753 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,753 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,754 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,754 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,754 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,754 | INFO     | queue completed_jobids has 1 job(s)
[2023-12-16 22:44:03] 2023-12-16 21:43:41,754 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,754 | INFO     | queue messages had 0 job(s) [purged]
[2023-12-16 22:44:03] 2023-12-16 21:43:41,755 | INFO     | job 6052607152 has completed (purged errors)
[2023-12-16 22:44:03] 2023-12-16 21:43:41,755 | INFO     | overall cleanup function is called
[2023-12-16 22:44:03] 2023-12-16 21:43:42,792 | INFO     | --- collectZombieJob: --- 10, [25306]
[2023-12-16 22:44:03] 2023-12-16 21:43:42,796 | INFO     | zombie collector waiting for pid 25306
[2023-12-16 22:44:03] 2023-12-16 21:43:42,796 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-12-16 22:44:03] 2023-12-16 21:43:43,802 | INFO     | collected zombie processes
[2023-12-16 22:44:03] 2023-12-16 21:43:43,802 | INFO     | will now attempt to kill all subprocesses of pid=25306
[2023-12-16 22:44:03] 2023-12-16 21:43:43,885 | INFO     | process IDs to be killed: [25306] (in reverse order)
[2023-12-16 22:44:03] 2023-12-16 21:43:43,996 | WARNING  | found no corresponding commands to process id(s)
[2023-12-16 22:44:03] 2023-12-16 21:43:43,996 | INFO     | Do not look for orphan processes in BOINC jobs
[2023-12-16 22:44:03] 2023-12-16 21:43:43,998 | INFO     | did not find any defunct processes belonging to 25306
[2023-12-16 22:44:03] 2023-12-16 21:43:44,000 | INFO     | did not find any defunct processes belonging to 25306
[2023-12-16 22:44:03] 2023-12-16 21:43:44,001 | INFO     | ready for new job
[2023-12-16 22:44:03] 2023-12-16 21:43:44,001 | INFO     | pilot has finished with previous job - re-establishing logging
[2023-12-16 22:44:03] 2023-12-16 21:43:44,002 | INFO     | **************************************
[2023-12-16 22:44:03] 2023-12-16 21:43:44,002 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2023-12-16 22:44:03] 2023-12-16 21:43:44,002 | INFO     | **************************************
[2023-12-16 22:44:03] 2023-12-16 21:43:44,002 | INFO     | 
[2023-12-16 22:44:03] 2023-12-16 21:43:44,003 | INFO     | pilot is running in a VM
[2023-12-16 22:44:03] 2023-12-16 21:43:44,003 | INFO     | architecture information:
[2023-12-16 22:44:03] 2023-12-16 21:43:44,007 | INFO     | executing command: cat /etc/os-release
[2023-12-16 22:44:03] 2023-12-16 21:43:44,088 | INFO     | cat /etc/os-release:
[2023-12-16 22:44:03] NAME="CentOS Linux"
[2023-12-16 22:44:03] VERSION="7 (Core)"
[2023-12-16 22:44:03] ID="centos"
[2023-12-16 22:44:03] ID_LIKE="rhel fedora"
[2023-12-16 22:44:03] VERSION_ID="7"
[2023-12-16 22:44:03] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-12-16 22:44:03] ANSI_COLOR="0;31"
[2023-12-16 22:44:03] CPE_NAME="cpe:/o:centos:centos:7"
[2023-12-16 22:44:03] HOME_URL="https://www.centos.org/"
[2023-12-16 22:44:03] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-12-16 22:44:03] 
[2023-12-16 22:44:03] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-12-16 22:44:03] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-12-16 22:44:03] REDHAT_SUPPORT_PRODUCT="centos"
[2023-12-16 22:44:03] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-12-16 22:44:03] 
[2023-12-16 22:44:03] 2023-12-16 21:43:44,089 | INFO     | **************************************
[2023-12-16 22:44:03] 2023-12-16 21:43:44,592 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2023-12-16 22:44:03] 2023-12-16 21:43:44,628 | INFO     | sufficient remaining disk space (10907287552 B)
[2023-12-16 22:44:03] 2023-12-16 21:43:44,629 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2023-12-16 22:44:03] 2023-12-16 21:43:44,630 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-12-16 22:44:03] 2023-12-16 21:43:44,631 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2023-12-16 22:44:03] 2023-12-16 21:43:44,632 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-12-16 22:44:03] 2023-12-16 21:43:44,633 | INFO     | found 0 job(s) in 20 queues
[2023-12-16 22:44:03] 2023-12-16 21:43:44,634 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2023-12-16 22:44:03] 2023-12-16 21:43:44,634 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2023-12-16 22:44:03] 2023-12-16 21:43:45,153 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2023-12-16 22:44:03] 2023-12-16 21:43:45,153 | INFO     | aborting loop
[2023-12-16 22:44:03] 2023-12-16 21:43:45,638 | INFO     | [job] retrieve thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:45,698 | INFO     | [payload] execute_payloads thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,031 | INFO     | [job] validate thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,071 | INFO     | [job] create_data_payload thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,071 | INFO     | [data] copytool_in thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,113 | INFO     | [payload] failed_post thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,158 | INFO     | [job] job monitor thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,326 | INFO     | [payload] control thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,585 | INFO     | [job] control thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,643 | INFO     | [data] copytool_out thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,657 | INFO     | [payload] validate_pre thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:46,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2023-12-16 22:44:03] 2023-12-16 21:43:46,741 | INFO     | [data] control thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:47,170 | INFO     | [payload] validate_post thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:47,546 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-12-16 22:44:03] 2023-12-16 21:43:47,692 | INFO     | [job] queue monitor thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:51,560 | INFO     | [data] queue_monitor thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:55,149 | INFO     | job.realtimelogging is not enabled
[2023-12-16 22:44:03] 2023-12-16 21:43:56,156 | INFO     | [payload] run_realtimelog thread has finished
[2023-12-16 22:44:03] 2023-12-16 21:43:57,131 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140508718819136)>', '<ExcThread(monitor, started 140507757926144)>']
[2023-12-16 22:44:03] 2023-12-16 21:43:57,687 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2023-12-16 22:44:03] 2023-12-16 21:43:57,689 | INFO     | [monitor] control thread has ended
[2023-12-16 22:44:03] 2023-12-16 21:44:02,146 | INFO     | end of generic workflow (traces error code: 0)
[2023-12-16 22:44:03] 2023-12-16 21:44:02,147 | INFO     | traces error code: 0
[2023-12-16 22:44:03] 2023-12-16 21:44:02,147 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2023-12-16 22:44:03] 2023-12-16 21:44:02,292 [wrapper] ==== pilot stdout END ====
[2023-12-16 22:44:03] 2023-12-16 21:44:02,302 [wrapper] ==== wrapper stdout RESUME ====
[2023-12-16 22:44:03] 2023-12-16 21:44:02,309 [wrapper] pilotpid: 18373
[2023-12-16 22:44:03] 2023-12-16 21:44:02,317 [wrapper] Pilot exit status: 0
[2023-12-16 22:44:03] 2023-12-16 21:44:02,344 [wrapper] pandaids: 6052607152
[2023-12-16 22:44:03] 2023-12-16 21:44:02,354 [wrapper] apfmon messages muted
[2023-12-16 22:44:03] 2023-12-16 21:44:02,359 [wrapper] Test setup, not cleaning
[2023-12-16 22:44:03] 2023-12-16 21:44:02,366 [wrapper] ==== wrapper stdout END ====
[2023-12-16 22:44:03] 2023-12-16 21:44:02,380 [wrapper] ==== wrapper stderr END ====
[2023-12-16 22:44:03] 2023-12-16 21:44:02,389 [wrapper] wrapperexiting ec=0, duration=2012
[2023-12-16 22:44:03] 2023-12-16 21:44:02,405 [wrapper] apfmon messages muted
[2023-12-16 22:44:03]  *** Error codes and diagnostics ***
[2023-12-16 22:44:03]     "exeErrorCode": 0,
[2023-12-16 22:44:03]     "exeErrorDiag": "",
[2023-12-16 22:44:03]     "pilotErrorCode": 0,
[2023-12-16 22:44:03]     "pilotErrorDiag": "",
[2023-12-16 22:44:03]  *** Listing of results directory ***
[2023-12-16 22:44:03] insgesamt 43704
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc   441289 16. Dez 22:01 pilot3.tar.gz
[2023-12-16 22:44:03] -rwx------. 1 boinc boinc    27439 16. Dez 22:07 runpilot2-wrapper.sh
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc     4388 16. Dez 22:07 queuedata.json
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc      107 16. Dez 22:10 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-16 22:44:03] -rwxr-xr-x. 1 boinc boinc     7986 16. Dez 22:10 run_atlas
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc      112 16. Dez 22:10 job.xml
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc     6046 16. Dez 22:10 init_data.xml
[2023-12-16 22:44:03] -rw-r--r--. 2 boinc boinc 37738636 16. Dez 22:10 EVNT.04972714._000024.pool.root.1
[2023-12-16 22:44:03] -rw-r--r--. 2 boinc boinc    17618 16. Dez 22:10 start_atlas.sh
[2023-12-16 22:44:03] drwxrwx--x. 2 boinc boinc       68 16. Dez 22:10 shared
[2023-12-16 22:44:03] -rw-r--r--. 2 boinc boinc   452882 16. Dez 22:10 input.tar.gz
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc        0 16. Dez 22:10 boinc_lockfile
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc     2752 16. Dez 22:10 pandaJob.out
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc      424 16. Dez 22:10 setup.sh.local
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc  1358245 16. Dez 22:11 cric_ddmendpoints.json
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc   979470 16. Dez 22:12 agis_schedconf.cvmfs.json
[2023-12-16 22:44:03] drwx------. 4 boinc boinc     4096 16. Dez 22:13 pilot3
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc  1402426 16. Dez 22:36 output.1.a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_14491.pool.root
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc     1016 16. Dez 22:36 memory_monitor_summary.json
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc      533 16. Dez 22:36 boinc_task_state.xml
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc   165011 16. Dez 22:39 a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_14491.1.job.log.tgz
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc     8192 16. Dez 22:43 boinc_mmap_file
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc       25 16. Dez 22:43 wrapper_checkpoint.txt
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc     6715 16. Dez 22:43 heartbeat.json
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc     4158 16. Dez 22:44 pilotlog.txt
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc   213194 16. Dez 22:44 a28fe1e4-b830-4a63-8600-a0a1d76ed6a7_14491.1.job.log
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc      464 16. Dez 22:44 output.list
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc      748 16. Dez 22:44 runtime_log
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc  1802240 16. Dez 22:44 result.tar.gz
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc    11856 16. Dez 22:44 runtime_log.err
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc      635 16. Dez 22:44 pLCLDma3qY4n7Olcko1bjSoqABFKDmABFKDmyeZQDmy0HKDmatKjSm.diag
[2023-12-16 22:44:03] -rw-r--r--. 1 boinc boinc    22794 16. Dez 22:44 stderr.txt
[2023-12-16 22:44:03] HITS file was successfully produced:
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc 1402426 16. Dez 22:36 shared/HITS.pool.root.1
[2023-12-16 22:44:03]  *** Contents of shared directory: ***
[2023-12-16 22:44:03] insgesamt 40452
[2023-12-16 22:44:03] -rw-r--r--. 2 boinc boinc 37738636 16. Dez 22:10 ATLAS.root_0
[2023-12-16 22:44:03] -rw-r--r--. 2 boinc boinc    17618 16. Dez 22:10 start_atlas.sh
[2023-12-16 22:44:03] -rw-r--r--. 2 boinc boinc   452882 16. Dez 22:10 input.tar.gz
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc  1402426 16. Dez 22:36 HITS.pool.root.1
[2023-12-16 22:44:03] -rw-------. 1 boinc boinc  1802240 16. Dez 22:44 result.tar.gz
22:44:04 (14132): run_atlas exited; CPU time 1025.416935
22:44:04 (14132): called boinc_finish(0)

</stderr_txt>
]]>


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