| Name | 3Y9KDmq70d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmqgIKDm2kwyln_0 |
| Workunit | 2373104 |
| Created | 31 Dec 2023, 2:53:05 UTC |
| Sent | 31 Dec 2023, 2:54:39 UTC |
| Report deadline | 7 Jan 2024, 2:54:39 UTC |
| Received | 31 Dec 2023, 3:23:21 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4008 |
| Run time | 25 min 53 sec |
| CPU time | 20 min 28 sec |
| Validate state | Valid |
| Credit | 18.95 |
| Device peak FLOPS | 3.12 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.45 GB |
| Peak swap size | 2.14 GB |
| Peak disk usage | 84.12 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
03:57:18 (19731): wrapper (7.7.26015): starting
03:57:18 (19731): wrapper: running run_atlas (--nthreads 1)
[2023-12-31 03:57:18] Arguments: --nthreads 1
[2023-12-31 03:57:18] Threads: 1
[2023-12-31 03:57:18] Checking for CVMFS
[2023-12-31 03:57:20] Probing /cvmfs/atlas.cern.ch... OK
[2023-12-31 03:57:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-12-31 03:57:21] Running cvmfs_config stat atlas.cern.ch
[2023-12-31 03:57:21] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-12-31 03:57:21] 2.6.3.0 19975 0 28296 127636 3 1 2678515 2816000 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-12-31 03:57:21] CVMFS is ok
[2023-12-31 03:57:21] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-12-31 03:57:21] Checking for apptainer binary...
[2023-12-31 03:57:21] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-12-31 03:57:21] apptainer is not installed, using version from CVMFS
[2023-12-31 03:57:21] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-12-31 03:57:22] HPi7COS7
[2023-12-31 03:57:22] apptainer works
[2023-12-31 03:57:22] Starting ATLAS job with PandaID=6065583230
[2023-12-31 03:57:22] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-12-31 04:23:09] *** The last 200 lines of the pilot log: ***
[2023-12-31 04:23:09] 2023-12-31 03:22:46,950 | DEBUG | pilot.control.job | send_state | data={'jobId': '6065583230', 'state': 'finished', 'timestamp': '2023-12-31T04:22:34+01:00', 'siteNam
[2023-12-31 04:23:09] 2023-12-31 03:22:46,952 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '6065583230', 'state': 'finished', 'timestamp': '2023-12-31T04:22:34
[2023-12-31 04:23:09] 2023-12-31 03:22:46,953 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json
[2023-12-31 04:23:09] 2023-12-31 03:22:46,954 | DEBUG | pilot.control.job | queue_monitor | job.completed=False
[2023-12-31 04:23:09] 2023-12-31 03:22:47,106 | INFO | pilot.control.job | make_job_report |
[2023-12-31 04:23:09] 2023-12-31 03:22:47,107 | INFO | pilot.control.job | make_job_report | job summary report
[2023-12-31 04:23:09] 2023-12-31 03:22:47,107 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-12-31 04:23:09] 2023-12-31 03:22:47,107 | INFO | pilot.control.job | make_job_report | PanDA job id: 6065583230
[2023-12-31 04:23:09] 2023-12-31 03:22:47,108 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-12-31 04:23:09] 2023-12-31 03:22:47,108 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-12-31 04:23:09] 2023-12-31 03:22:47,108 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-12-31 04:23:09] 2023-12-31 03:22:47,108 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-12-31 04:23:09] 2023-12-31 03:22:47,108 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-12-31 04:23:09] 2023-12-31 03:22:47,108 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-12-31 04:23:09] 2023-12-31 03:22:47,109 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-12-31 04:23:09] 2023-12-31 03:22:47,109 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-12-31 04:23:09] 2023-12-31 03:22:47,109 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-12-31 04:23:09] 2023-12-31 03:22:47,109 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1295 s
[2023-12-31 04:23:09] 2023-12-31 03:22:47,109 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-12-31 04:23:09] 2023-12-31 03:22:47,109 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-12-31 04:23:09] 2023-12-31 03:22:47,110 | INFO | pilot.control.job | make_job_report | pid: 30893
[2023-12-31 04:23:09] 2023-12-31 03:22:47,110 | INFO | pilot.control.job | make_job_report | pgrp: 30893
[2023-12-31 04:23:09] 2023-12-31 03:22:47,110 | INFO | pilot.control.job | make_job_report | corecount: 1
[2023-12-31 04:23:09] 2023-12-31 03:22:47,110 | INFO | pilot.control.job | make_job_report | event service: False
[2023-12-31 04:23:09] 2023-12-31 03:22:47,110 | INFO | pilot.control.job | make_job_report | sizes: {0: 2399197, 1: 2399197, 9: 2399431, 12: 2399459, 1465: 2422352, 1468: 2431586, 1481: 2431752
[2023-12-31 04:23:09] 2023-12-31 03:22:47,111 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-12-31 04:23:09] 2023-12-31 03:22:47,111 | INFO | pilot.control.job | make_job_report |
[2023-12-31 04:23:09] 2023-12-31 03:22:47,111 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0:
[2023-12-31 04:23:09]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,111 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0
[2023-12-31 04:23:09] 2023-12-31 03:22:47,141 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 04:23:09] 2023-12-31 03:22:47,167 | DEBUG | pilot.control.job | has_job_completed | total 44140
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 131 Dec 31 03:57 3Y9KDmq70d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmqgIKDm2kwyln.diag
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 37965264 Dec 31 03:57 EVNT.04972714._000027.pool.root.1
[2023-12-31 04:23:09] drwxrwx---. 2 boinc boinc 4096 Dec 31 04:22 PanDA_Pilot-6065583230/
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 0 Dec 31 03:57 agis_ddmendpoints.agis.ALL.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 983529 Dec 31 03:57 agis_schedconf.cvmfs.json
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 0 Dec 31 03:57 boinc_lockfile
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 8192 Dec 31 04:22 boinc_mmap_file
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 534 Dec 31 04:22 boinc_task_state.xml
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 677350 Dec 31 04:22 c6dba656-c93f-4e70-acc3-3a222425f730_27573.1.job.log
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 195848 Dec 31 04:22 c6dba656-c93f-4e70-acc3-3a222425f730_27573.1.job.log.tgz
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1338505 Dec 31 03:57 cric_ddmendpoints.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 8793 Dec 31 04:22 heartbeat.json
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 6046 Dec 31 03:57 init_data.xml
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 488883 Dec 31 03:57 input.tar.gz
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 112 Dec 31 03:57 job.xml
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1021 Dec 31 04:22 memory_monitor_summary.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1808603 Dec 31 04:22 output.1.c6dba656-c93f-4e70-acc3-3a222425f730_27573.pool.root
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 464 Dec 31 04:22 output.list
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 2663 Dec 31 03:57 pandaJob.out
[2023-12-31 04:23:09] drwx------. 5 boinc boinc 4096 Dec 31 03:57 pilot3/
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 477391 Dec 31 03:52 pilot3.tar.gz
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 47 Dec 31 03:57 pilot_heartbeat.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 647773 Dec 31 04:22 pilotlog.txt
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 4388 Dec 31 03:52 queuedata.json
[2023-12-31 04:23:09] -rwxr-xr-x. 1 boinc boinc 7986 Dec 31 03:57 run_atlas*
[2023-12-31 04:23:09] -rwx------. 1 boinc boinc 27437 Dec 31 03:52 runpilot2-wrapper.sh*
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 407 Dec 31 03:57 runtime_log
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 7733 Dec 31 03:57 runtime_log.err
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 424 Dec 31 03:57 setup.sh.local
[2023-12-31 04:23:09] drwxrwx--x. 2 boinc boinc 68 Dec 31 03:57 shared/
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 17646 Dec 31 03:57 start_atlas.sh
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 1740 Dec 31 03:57 stderr.txt
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 107 Dec 31 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 26 Dec 31 04:22 wrapper_checkpoint.txt
[2023-12-31 04:23:09] 2023-12-31 03:22:47,167 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,167 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,167 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,167 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,167 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,168 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,168 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,168 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,168 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,168 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,168 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,168 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-12-31 04:23:09] 2023-12-31 03:22:47,169 | INFO | pilot.control.job | has_job_completed | job 6065583230 has completed (purged errors)
[2023-12-31 04:23:09] 2023-12-31 03:22:47,170 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-12-31 04:23:09] 2023-12-31 03:22:47,170 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-12-31 04:23:09] 2023-12-31 03:22:47,172 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-6065583230
[2023-12-31 04:23:09] 2023-12-31 03:22:47,338 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1504.5352959632874 s) - must update
[2023-12-31 04:23:09] 2023-12-31 03:22:48,221 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [30893]
[2023-12-31 04:23:09] 2023-12-31 03:22:48,221 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 30893
[2023-12-31 04:23:09] 2023-12-31 03:22:48,221 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-12-31 04:23:09] 2023-12-31 03:22:49,238 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-12-31 04:23:09] 2023-12-31 03:22:49,239 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=30893
[2023-12-31 04:23:09] 2023-12-31 03:22:49,269 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 04:23:09] 2023-12-31 03:22:49,347 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1506.5437030792236 s) - must update
[2023-12-31 04:23:09] 2023-12-31 03:22:49,350 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [30893] (in reverse order)
[2023-12-31 04:23:09] 2023-12-31 03:22:49,366 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 04:23:09] 2023-12-31 03:22:49,440 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-12-31 04:23:09] 2023-12-31 03:22:49,440 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-12-31 04:23:09] 2023-12-31 03:22:49,444 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 30893
[2023-12-31 04:23:09] 2023-12-31 03:22:49,447 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 30893
[2023-12-31 04:23:09] 2023-12-31 03:22:49,447 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-12-31 04:23:09] 2023-12-31 03:22:49,447 | INFO | pilot.control.job | retrieve | ready for new job
[2023-12-31 04:23:09] 2023-12-31 03:22:49,447 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-12-31 04:23:09] 2023-12-31 03:22:49,449 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 04:23:09] 2023-12-31 03:22:49,449 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.7.1.22 ***
[2023-12-31 04:23:09] 2023-12-31 03:22:49,449 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 04:23:09] 2023-12-31 03:22:49,449 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-12-31 04:23:09] 2023-12-31 03:22:49,449 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-12-31 04:23:09] 2023-12-31 03:22:49,450 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-12-31 04:23:09] 2023-12-31 03:22:49,450 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2023-12-31 04:23:09] 2023-12-31 03:22:49,461 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 04:23:09] 2023-12-31 03:22:49,476 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2023-12-31 04:23:09] NAME="CentOS Linux"
[2023-12-31 04:23:09] VERSION="7 (Core)"
[2023-12-31 04:23:09] ID="centos"
[2023-12-31 04:23:09] ID_LIKE="rhel fedora"
[2023-12-31 04:23:09] VERSION_ID="7"
[2023-12-31 04:23:09] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-12-31 04:23:09] ANSI_COLOR="0;31"
[2023-12-31 04:23:09] CPE_NAME="cpe:/o:centos:centos:7"
[2023-12-31 04:23:09] HOME_URL="https://www.centos.org/"
[2023-12-31 04:23:09] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-12-31 04:23:09]
[2023-12-31 04:23:09] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-12-31 04:23:09] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-12-31 04:23:09] REDHAT_SUPPORT_PRODUCT="centos"
[2023-12-31 04:23:09] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-12-31 04:23:09]
[2023-12-31 04:23:09] 2023-12-31 03:22:49,477 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 04:23:09] 2023-12-31 03:22:49,978 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0
[2023-12-31 04:23:09] 2023-12-31 03:22:49,979 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0
[2023-12-31 04:23:09] 2023-12-31 03:22:50,010 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 04:23:09] 2023-12-31 03:22:50,035 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-12-31 04:23:09] /dev/mapper/centos-root 22002 12211 9792 56% /var/lib/boinc/slots/0
[2023-12-31 04:23:09] 2023-12-31 03:22:50,035 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-12-31 04:23:09] 2023-12-31 03:22:50,036 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (10267656192 B)
[2023-12-31 04:23:09] 2023-12-31 03:22:50,036 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-12-31 04:23:09] 2023-12-31 03:22:50,036 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-12-31 04:23:09] 2023-12-31 03:22:50,037 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2023-12-31 04:23:09] 2023-12-31 03:22:50,037 | INFO | pilot.control.job | job_monitor | aborting loop
[2023-12-31 04:23:09] 2023-12-31 03:22:50,037 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-12-31 04:23:09] 2023-12-31 03:22:50,037 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-12-31 04:23:09] 2023-12-31 03:22:50,037 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1507.2342841625214 s) - must update
[2023-12-31 04:23:09] 2023-12-31 03:22:50,038 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues
[2023-12-31 04:23:09] 2023-12-31 03:22:50,038 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set
[2023-12-31 04:23:09] 2023-12-31 03:22:50,038 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish
[2023-12-31 04:23:09] 2023-12-31 03:22:50,107 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-12-31 04:23:09] 2023-12-31 03:22:50,302 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-12-31 04:23:09] 2023-12-31 03:22:51,038 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,051 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,121 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,122 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,123 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,166 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,153 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,325 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,343 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-12-31 04:23:09] 2023-12-31 03:22:51,613 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:51,952 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:52,038 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:52,128 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-12-31 04:23:09] 2023-12-31 03:22:52,349 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:52,609 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:53,136 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:22:53,541 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-12-31 04:23:09] 2023-12-31 03:22:57,549 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:23:00,107 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-12-31 04:23:09] 2023-12-31 03:23:00,107 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-12-31 04:23:09] 2023-12-31 03:23:00,107 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-12-31 04:23:09] 2023-12-31 03:23:01,109 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-12-31 04:23:09] 2023-12-31 03:23:02,890 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140534
[2023-12-31 04:23:09] 2023-12-31 03:23:02,890 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted
[2023-12-31 04:23:09] 2023-12-31 03:23:03,125 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring
[2023-12-31 04:23:09] 2023-12-31 03:23:03,126 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-12-31 04:23:09] 2023-12-31 03:23:07,912 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-12-31 04:23:09] 2023-12-31 03:23:07,912 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-12-31 04:23:09] 2023-12-31 03:23:07,994 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(23975)---pstree(8477)
[2023-12-31 04:23:09]
[2023-12-31 04:23:09] 2023-12-31 03:23:07,995 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[23975, 8477]
[2023-12-31 04:23:09] 2023-12-31 03:23:08,039 | DEBUG | pilot.util.processgroups | is_defunct | 23975: return code=0, stdout=SN
[2023-12-31 04:23:09] , stderr=
[2023-12-31 04:23:09] 2023-12-31 03:23:08,093 | DEBUG | pilot.util.processgroups | is_defunct | 8477: return code=1, stdout=, stderr=
[2023-12-31 04:23:09] 2023-12-31 03:23:08,095 | INFO | root | list_zombies | no defunct processes were found
[2023-12-31 04:23:09] 2023-12-31 03:23:08,096 | INFO | root | wrap_up | traces error code: 0
[2023-12-31 04:23:09] 2023-12-31 03:23:08,097 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0)
[2023-12-31 04:23:09] 2023-12-31 03:23:08,233 [wrapper] ==== pilot stdout END ====
[2023-12-31 04:23:09] 2023-12-31 03:23:08,260 [wrapper] ==== wrapper stdout RESUME ====
[2023-12-31 04:23:09] 2023-12-31 03:23:08,271 [wrapper] pilotpid: 23975
[2023-12-31 04:23:09] 2023-12-31 03:23:08,280 [wrapper] Pilot exit status: 0
[2023-12-31 04:23:09] 2023-12-31 03:23:08,306 [wrapper] pandaids: 6065583230
[2023-12-31 04:23:09] 2023-12-31 03:23:08,322 [wrapper] apfmon messages muted
[2023-12-31 04:23:09] 2023-12-31 03:23:08,327 [wrapper] Test setup, not cleaning
[2023-12-31 04:23:09] 2023-12-31 03:23:08,332 [wrapper] ==== wrapper stdout END ====
[2023-12-31 04:23:09] 2023-12-31 03:23:08,337 [wrapper] ==== wrapper stderr END ====
[2023-12-31 04:23:09] 2023-12-31 03:23:08,357 [wrapper] wrapperexiting ec=0, duration=1545
[2023-12-31 04:23:09] 2023-12-31 03:23:08,364 [wrapper] apfmon messages muted
[2023-12-31 04:23:09] *** Error codes and diagnostics ***
[2023-12-31 04:23:09] "exeErrorCode": 0,
[2023-12-31 04:23:09] "exeErrorDiag": "",
[2023-12-31 04:23:09] "pilotErrorCode": 0,
[2023-12-31 04:23:09] "pilotErrorDiag": "",
[2023-12-31 04:23:09] *** Listing of results directory ***
[2023-12-31 04:23:09] insgesamt 45792
[2023-12-31 04:23:09] -rwx------. 1 boinc boinc 27437 31. Dez 03:52 runpilot2-wrapper.sh
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 4388 31. Dez 03:52 queuedata.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 477391 31. Dez 03:52 pilot3.tar.gz
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 107 31. Dez 03:57 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-31 04:23:09] -rwxr-xr-x. 1 boinc boinc 7986 31. Dez 03:57 run_atlas
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 112 31. Dez 03:57 job.xml
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 17646 31. Dez 03:57 start_atlas.sh
[2023-12-31 04:23:09] drwxrwx--x. 2 boinc boinc 68 31. Dez 03:57 shared
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 488883 31. Dez 03:57 input.tar.gz
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 6046 31. Dez 03:57 init_data.xml
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 37965264 31. Dez 03:57 EVNT.04972714._000027.pool.root.1
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 0 31. Dez 03:57 boinc_lockfile
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 2663 31. Dez 03:57 pandaJob.out
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 424 31. Dez 03:57 setup.sh.local
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 983529 31. Dez 03:57 agis_schedconf.cvmfs.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 0 31. Dez 03:57 agis_ddmendpoints.agis.ALL.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1338505 31. Dez 03:57 cric_ddmendpoints.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 47 31. Dez 03:57 pilot_heartbeat.json
[2023-12-31 04:23:09] drwx------. 5 boinc boinc 4096 31. Dez 03:57 pilot3
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1808603 31. Dez 04:22 output.1.c6dba656-c93f-4e70-acc3-3a222425f730_27573.pool.root
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1021 31. Dez 04:22 memory_monitor_summary.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 195848 31. Dez 04:22 c6dba656-c93f-4e70-acc3-3a222425f730_27573.1.job.log.tgz
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 8192 31. Dez 04:22 boinc_mmap_file
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 26 31. Dez 04:22 wrapper_checkpoint.txt
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 534 31. Dez 04:22 boinc_task_state.xml
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 8793 31. Dez 04:22 heartbeat.json
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 9720 31. Dez 04:23 pilotlog.txt
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 696254 31. Dez 04:23 c6dba656-c93f-4e70-acc3-3a222425f730_27573.1.job.log
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 464 31. Dez 04:23 output.list
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 748 31. Dez 04:23 runtime_log
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 2723840 31. Dez 04:23 result.tar.gz
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 11844 31. Dez 04:23 runtime_log.err
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 634 31. Dez 04:23 3Y9KDmq70d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmqgIKDm2kwyln.diag
[2023-12-31 04:23:09] -rw-r--r--. 1 boinc boinc 29272 31. Dez 04:23 stderr.txt
[2023-12-31 04:23:09] HITS file was successfully produced:
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1808603 31. Dez 04:22 shared/HITS.pool.root.1
[2023-12-31 04:23:09] *** Contents of shared directory: ***
[2023-12-31 04:23:09] insgesamt 42004
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 17646 31. Dez 03:57 start_atlas.sh
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 488883 31. Dez 03:57 input.tar.gz
[2023-12-31 04:23:09] -rw-r--r--. 2 boinc boinc 37965264 31. Dez 03:57 ATLAS.root_0
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 1808603 31. Dez 04:22 HITS.pool.root.1
[2023-12-31 04:23:09] -rw-------. 1 boinc boinc 2723840 31. Dez 04:23 result.tar.gz
04:23:10 (19731): run_atlas exited; CPU time 1228.907071
04:23:10 (19731): called boinc_finish(0)
</stderr_txt>
]]>
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