| Name | QG1MDmbR7d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmahIKDmyBMVkm_0 |
| Workunit | 2373178 |
| Created | 31 Dec 2023, 9:37:55 UTC |
| Sent | 31 Dec 2023, 9:40:10 UTC |
| Report deadline | 7 Jan 2024, 9:40:10 UTC |
| Received | 31 Dec 2023, 10:04:25 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4008 |
| Run time | 21 min 50 sec |
| CPU time | 15 min 10 sec |
| Validate state | Valid |
| Credit | 16.04 |
| Device peak FLOPS | 3.12 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.43 GB |
| Peak swap size | 3.32 GB |
| Peak disk usage | 77.96 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
10:41:22 (9917): wrapper (7.7.26015): starting
10:41:22 (9917): wrapper: running run_atlas (--nthreads 1)
[2023-12-31 10:41:22] Arguments: --nthreads 1
[2023-12-31 10:41:22] Threads: 1
[2023-12-31 10:41:22] Checking for CVMFS
[2023-12-31 10:41:25] Probing /cvmfs/atlas.cern.ch... OK
[2023-12-31 10:41:28] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-12-31 10:41:28] Running cvmfs_config stat atlas.cern.ch
[2023-12-31 10:41:28] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-12-31 10:41:28] 2.6.3.0 10161 0 26304 127646 3 1 2694619 2816001 0 65024 0 0 n/a 962 862 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-12-31 10:41:28] CVMFS is ok
[2023-12-31 10:41:28] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-12-31 10:41:28] Checking for apptainer binary...
[2023-12-31 10:41:28] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-12-31 10:41:28] apptainer is not installed, using version from CVMFS
[2023-12-31 10:41:28] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-12-31 10:41:29] HPi7COS7
[2023-12-31 10:41:29] apptainer works
[2023-12-31 10:41:29] Starting ATLAS job with PandaID=6065828418
[2023-12-31 10:41:29] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-12-31 11:03:11] *** The last 200 lines of the pilot log: ***
[2023-12-31 11:03:11] 2023-12-31 10:02:49,452 | DEBUG | pilot.control.job | send_state | data={'jobId': '6065828418', 'state': 'finished', 'timestamp': '2023-12-31T11:02:36+01:00', 'siteNam
[2023-12-31 11:03:11] 2023-12-31 10:02:49,454 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '6065828418', 'state': 'finished', 'timestamp': '2023-12-31T11:02:36
[2023-12-31 11:03:11] 2023-12-31 10:02:49,455 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json
[2023-12-31 11:03:11] 2023-12-31 10:02:49,455 | DEBUG | pilot.control.job | queue_monitor | job.completed=False
[2023-12-31 11:03:11] 2023-12-31 10:02:49,941 | INFO | pilot.control.job | make_job_report |
[2023-12-31 11:03:11] 2023-12-31 10:02:49,942 | INFO | pilot.control.job | make_job_report | job summary report
[2023-12-31 11:03:11] 2023-12-31 10:02:49,942 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | PanDA job id: 6065828418
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-12-31 11:03:11] 2023-12-31 10:02:49,943 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-12-31 11:03:11] 2023-12-31 10:02:49,944 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-12-31 11:03:11] 2023-12-31 10:02:49,944 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-12-31 11:03:11] 2023-12-31 10:02:49,944 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 973 s
[2023-12-31 11:03:11] 2023-12-31 10:02:49,944 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-12-31 11:03:11] 2023-12-31 10:02:49,944 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-12-31 11:03:11] 2023-12-31 10:02:49,945 | INFO | pilot.control.job | make_job_report | pid: 21083
[2023-12-31 11:03:11] 2023-12-31 10:02:49,945 | INFO | pilot.control.job | make_job_report | pgrp: 21083
[2023-12-31 11:03:11] 2023-12-31 10:02:49,945 | INFO | pilot.control.job | make_job_report | corecount: 1
[2023-12-31 11:03:11] 2023-12-31 10:02:49,945 | INFO | pilot.control.job | make_job_report | event service: False
[2023-12-31 11:03:11] 2023-12-31 10:02:49,945 | INFO | pilot.control.job | make_job_report | sizes: {0: 2398290, 1: 2399225, 2: 2399225, 10: 2399459, 12: 2399487, 1153: 2419416, 1154: 2428522,
[2023-12-31 11:03:11] 2023-12-31 10:02:49,946 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-12-31 11:03:11] 2023-12-31 10:02:49,946 | INFO | pilot.control.job | make_job_report |
[2023-12-31 11:03:11] 2023-12-31 10:02:49,946 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0:
[2023-12-31 11:03:11]
[2023-12-31 11:03:11] 2023-12-31 10:02:49,947 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0
[2023-12-31 11:03:11] 2023-12-31 10:02:49,973 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 11:03:11] 2023-12-31 10:02:50,018 | DEBUG | pilot.control.job | has_job_completed | total 43072
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 37438704 Dec 31 10:41 EVNT.04972714._000033.pool.root.1
[2023-12-31 11:03:11] drwxrwx---. 2 boinc boinc 4096 Dec 31 11:02 PanDA_Pilot-6065828418/
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 131 Dec 31 10:41 QG1MDmbR7d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmahIKDmyBMVkm.diag
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 0 Dec 31 10:42 agis_ddmendpoints.agis.ALL.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 983529 Dec 31 10:43 agis_schedconf.cvmfs.json
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 0 Dec 31 10:41 boinc_lockfile
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 8192 Dec 31 11:02 boinc_mmap_file
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 533 Dec 31 11:02 boinc_task_state.xml
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1338505 Dec 31 10:42 cric_ddmendpoints.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 559502 Dec 31 11:02 f890187e-efd6-49b5-93ed-8964149682e8_49989.1.job.log
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 187695 Dec 31 11:02 f890187e-efd6-49b5-93ed-8964149682e8_49989.1.job.log.tgz
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 6689 Dec 31 11:02 heartbeat.json
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 6046 Dec 31 10:41 init_data.xml
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 488890 Dec 31 10:41 input.tar.gz
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 112 Dec 31 10:41 job.xml
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1020 Dec 31 11:02 memory_monitor_summary.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1251566 Dec 31 11:02 output.1.f890187e-efd6-49b5-93ed-8964149682e8_49989.pool.root
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 464 Dec 31 11:02 output.list
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 2663 Dec 31 10:41 pandaJob.out
[2023-12-31 11:03:11] drwx------. 5 boinc boinc 4096 Dec 31 10:43 pilot3/
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 477391 Dec 31 10:37 pilot3.tar.gz
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 45 Dec 31 10:42 pilot_heartbeat.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 529925 Dec 31 11:02 pilotlog.txt
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 4388 Dec 31 10:37 queuedata.json
[2023-12-31 11:03:11] -rwxr-xr-x. 1 boinc boinc 7986 Dec 31 10:41 run_atlas*
[2023-12-31 11:03:11] -rwx------. 1 boinc boinc 27437 Dec 31 10:37 runpilot2-wrapper.sh*
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 407 Dec 31 10:41 runtime_log
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 7733 Dec 31 10:41 runtime_log.err
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 424 Dec 31 10:41 setup.sh.local
[2023-12-31 11:03:11] drwxrwx--x. 2 boinc boinc 68 Dec 31 10:41 shared/
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 17646 Dec 31 10:41 start_atlas.sh
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 1743 Dec 31 10:41 stderr.txt
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 107 Dec 31 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 25 Dec 31 11:02 wrapper_checkpoint.txt
[2023-12-31 11:03:11] 2023-12-31 10:02:50,018 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,018 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,018 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,018 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,019 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | INFO | pilot.control.job | has_job_completed | job 6065828418 has completed (purged errors)
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-12-31 11:03:11] 2023-12-31 10:02:50,020 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-12-31 11:03:11] 2023-12-31 10:02:50,023 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-6065828418
[2023-12-31 11:03:11] 2023-12-31 10:02:50,740 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1253.125361919403 s) - must update ?
[2023-12-31 11:03:11] 2023-12-31 10:02:51,028 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [21083]
[2023-12-31 11:03:11] 2023-12-31 10:02:51,028 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 21083
[2023-12-31 11:03:11] 2023-12-31 10:02:51,028 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-12-31 11:03:11] 2023-12-31 10:02:52,030 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-12-31 11:03:11] 2023-12-31 10:02:52,030 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=21083
[2023-12-31 11:03:11] 2023-12-31 10:02:52,047 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 11:03:11] 2023-12-31 10:02:52,150 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [21083] (in reverse order)
[2023-12-31 11:03:11] 2023-12-31 10:02:52,164 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 11:03:11] 2023-12-31 10:02:52,238 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-12-31 11:03:11] 2023-12-31 10:02:52,239 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-12-31 11:03:11] 2023-12-31 10:02:52,246 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 21083
[2023-12-31 11:03:11] 2023-12-31 10:02:52,253 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 21083
[2023-12-31 11:03:11] 2023-12-31 10:02:52,254 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-12-31 11:03:11] 2023-12-31 10:02:52,255 | INFO | pilot.control.job | retrieve | ready for new job
[2023-12-31 11:03:11] 2023-12-31 10:02:52,256 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-12-31 11:03:11] 2023-12-31 10:02:52,262 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 11:03:11] 2023-12-31 10:02:52,265 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.7.1.22 ***
[2023-12-31 11:03:11] 2023-12-31 10:02:52,267 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 11:03:11] 2023-12-31 10:02:52,267 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-12-31 11:03:11] 2023-12-31 10:02:52,269 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-12-31 11:03:11] 2023-12-31 10:02:52,270 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-12-31 11:03:11] 2023-12-31 10:02:52,273 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2023-12-31 11:03:11] 2023-12-31 10:02:52,296 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 11:03:11] 2023-12-31 10:02:52,309 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2023-12-31 11:03:11] NAME="CentOS Linux"
[2023-12-31 11:03:11] VERSION="7 (Core)"
[2023-12-31 11:03:11] ID="centos"
[2023-12-31 11:03:11] ID_LIKE="rhel fedora"
[2023-12-31 11:03:11] VERSION_ID="7"
[2023-12-31 11:03:11] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-12-31 11:03:11] ANSI_COLOR="0;31"
[2023-12-31 11:03:11] CPE_NAME="cpe:/o:centos:centos:7"
[2023-12-31 11:03:11] HOME_URL="https://www.centos.org/"
[2023-12-31 11:03:11] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-12-31 11:03:11]
[2023-12-31 11:03:11] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-12-31 11:03:11] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-12-31 11:03:11] REDHAT_SUPPORT_PRODUCT="centos"
[2023-12-31 11:03:11] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-12-31 11:03:11]
[2023-12-31 11:03:11] 2023-12-31 10:02:52,309 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 11:03:11] 2023-12-31 10:02:52,742 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1255.1271178722382 s) - must update
[2023-12-31 11:03:11] 2023-12-31 10:02:52,823 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0
[2023-12-31 11:03:11] 2023-12-31 10:02:52,824 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0
[2023-12-31 11:03:11] 2023-12-31 10:02:52,859 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 11:03:11] 2023-12-31 10:02:52,879 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-12-31 11:03:11] /dev/mapper/centos-root 22002 12280 9722 56% /var/lib/boinc/slots/0
[2023-12-31 11:03:11] 2023-12-31 10:02:52,879 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-12-31 11:03:11] 2023-12-31 10:02:52,879 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (10194255872 B)
[2023-12-31 11:03:11] 2023-12-31 10:02:52,880 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-12-31 11:03:11] 2023-12-31 10:02:52,880 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-12-31 11:03:11] 2023-12-31 10:02:52,880 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-12-31 11:03:11] 2023-12-31 10:02:52,880 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1255.266023159027 s) - must update ?
[2023-12-31 11:03:11] 2023-12-31 10:02:52,881 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues
[2023-12-31 11:03:11] 2023-12-31 10:02:52,881 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set
[2023-12-31 11:03:11] 2023-12-31 10:02:52,881 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish
[2023-12-31 11:03:11] 2023-12-31 10:02:52,881 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2023-12-31 11:03:11] 2023-12-31 10:02:52,881 | INFO | pilot.control.job | job_monitor | aborting loop
[2023-12-31 11:03:11] 2023-12-31 10:02:53,887 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:53,890 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:53,895 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-12-31 11:03:11] 2023-12-31 10:02:53,895 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-12-31 11:03:11] 2023-12-31 10:02:53,946 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:53,994 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-12-31 11:03:11] 2023-12-31 10:02:54,058 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:54,367 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-12-31 11:03:11] 2023-12-31 10:02:54,428 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:54,714 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:54,753 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-12-31 11:03:11] 2023-12-31 10:02:54,870 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:54,897 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:54,897 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:54,948 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:55,001 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:55,142 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:55,758 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:02:55,990 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-12-31 11:03:11] 2023-12-31 10:02:56,371 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:03:00,019 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:03:03,467 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-12-31 11:03:11] 2023-12-31 10:03:03,468 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-12-31 11:03:11] 2023-12-31 10:03:03,468 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-12-31 11:03:11] 2023-12-31 10:03:04,472 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-12-31 11:03:11] 2023-12-31 10:03:05,127 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140440
[2023-12-31 11:03:11] 2023-12-31 10:03:05,127 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted
[2023-12-31 11:03:11] 2023-12-31 10:03:05,934 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring
[2023-12-31 11:03:11] 2023-12-31 10:03:05,934 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-12-31 11:03:11] 2023-12-31 10:03:10,157 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-12-31 11:03:11] 2023-12-31 10:03:10,158 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-12-31 11:03:11] 2023-12-31 10:03:10,218 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(14162)---pstree(30764)
[2023-12-31 11:03:11]
[2023-12-31 11:03:11] 2023-12-31 10:03:10,220 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[14162, 30764]
[2023-12-31 11:03:11] 2023-12-31 10:03:10,261 | DEBUG | pilot.util.processgroups | is_defunct | 14162: return code=0, stdout=SN
[2023-12-31 11:03:11] , stderr=
[2023-12-31 11:03:11] 2023-12-31 10:03:10,332 | DEBUG | pilot.util.processgroups | is_defunct | 30764: return code=1, stdout=, stderr=
[2023-12-31 11:03:11] 2023-12-31 10:03:10,332 | INFO | root | list_zombies | no defunct processes were found
[2023-12-31 11:03:11] 2023-12-31 10:03:10,332 | INFO | root | wrap_up | traces error code: 0
[2023-12-31 11:03:11] 2023-12-31 10:03:10,332 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0)
[2023-12-31 11:03:11] 2023-12-31 10:03:10,463 [wrapper] ==== pilot stdout END ====
[2023-12-31 11:03:11] 2023-12-31 10:03:10,474 [wrapper] ==== wrapper stdout RESUME ====
[2023-12-31 11:03:11] 2023-12-31 10:03:10,482 [wrapper] pilotpid: 14162
[2023-12-31 11:03:11] 2023-12-31 10:03:10,489 [wrapper] Pilot exit status: 0
[2023-12-31 11:03:11] 2023-12-31 10:03:10,516 [wrapper] pandaids: 6065828418
[2023-12-31 11:03:11] 2023-12-31 10:03:10,528 [wrapper] apfmon messages muted
[2023-12-31 11:03:11] 2023-12-31 10:03:10,532 [wrapper] Test setup, not cleaning
[2023-12-31 11:03:11] 2023-12-31 10:03:10,537 [wrapper] ==== wrapper stdout END ====
[2023-12-31 11:03:11] 2023-12-31 10:03:10,547 [wrapper] ==== wrapper stderr END ====
[2023-12-31 11:03:11] 2023-12-31 10:03:10,564 [wrapper] wrapperexiting ec=0, duration=1300
[2023-12-31 11:03:11] 2023-12-31 10:03:10,578 [wrapper] apfmon messages muted
[2023-12-31 11:03:11] *** Error codes and diagnostics ***
[2023-12-31 11:03:11] "exeErrorCode": 0,
[2023-12-31 11:03:11] "exeErrorDiag": "",
[2023-12-31 11:03:11] "pilotErrorCode": 0,
[2023-12-31 11:03:11] "pilotErrorDiag": "",
[2023-12-31 11:03:11] *** Listing of results directory ***
[2023-12-31 11:03:11] insgesamt 43944
[2023-12-31 11:03:11] -rwx------. 1 boinc boinc 27437 31. Dez 10:37 runpilot2-wrapper.sh
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 4388 31. Dez 10:37 queuedata.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 477391 31. Dez 10:37 pilot3.tar.gz
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 107 31. Dez 10:41 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-31 11:03:11] -rwxr-xr-x. 1 boinc boinc 7986 31. Dez 10:41 run_atlas
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 112 31. Dez 10:41 job.xml
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 17646 31. Dez 10:41 start_atlas.sh
[2023-12-31 11:03:11] drwxrwx--x. 2 boinc boinc 68 31. Dez 10:41 shared
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 488890 31. Dez 10:41 input.tar.gz
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 6046 31. Dez 10:41 init_data.xml
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 37438704 31. Dez 10:41 EVNT.04972714._000033.pool.root.1
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 0 31. Dez 10:41 boinc_lockfile
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 2663 31. Dez 10:41 pandaJob.out
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 424 31. Dez 10:41 setup.sh.local
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 0 31. Dez 10:42 agis_ddmendpoints.agis.ALL.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1338505 31. Dez 10:42 cric_ddmendpoints.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 45 31. Dez 10:42 pilot_heartbeat.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 983529 31. Dez 10:43 agis_schedconf.cvmfs.json
[2023-12-31 11:03:11] drwx------. 5 boinc boinc 4096 31. Dez 10:43 pilot3
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1251566 31. Dez 11:02 output.1.f890187e-efd6-49b5-93ed-8964149682e8_49989.pool.root
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 533 31. Dez 11:02 boinc_task_state.xml
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1020 31. Dez 11:02 memory_monitor_summary.json
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 187695 31. Dez 11:02 f890187e-efd6-49b5-93ed-8964149682e8_49989.1.job.log.tgz
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 6689 31. Dez 11:02 heartbeat.json
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 8192 31. Dez 11:03 boinc_mmap_file
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 25 31. Dez 11:03 wrapper_checkpoint.txt
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 9926 31. Dez 11:03 pilotlog.txt
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 578407 31. Dez 11:03 f890187e-efd6-49b5-93ed-8964149682e8_49989.1.job.log
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 464 31. Dez 11:03 output.list
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 748 31. Dez 11:03 runtime_log
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 2037760 31. Dez 11:03 result.tar.gz
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 11844 31. Dez 11:03 runtime_log.err
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 633 31. Dez 11:03 QG1MDmbR7d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmahIKDmyBMVkm.diag
[2023-12-31 11:03:11] -rw-r--r--. 1 boinc boinc 29277 31. Dez 11:03 stderr.txt
[2023-12-31 11:03:11] HITS file was successfully produced:
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1251566 31. Dez 11:02 shared/HITS.pool.root.1
[2023-12-31 11:03:11] *** Contents of shared directory: ***
[2023-12-31 11:03:11] insgesamt 40280
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 17646 31. Dez 10:41 start_atlas.sh
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 488890 31. Dez 10:41 input.tar.gz
[2023-12-31 11:03:11] -rw-r--r--. 2 boinc boinc 37438704 31. Dez 10:41 ATLAS.root_0
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 1251566 31. Dez 11:02 HITS.pool.root.1
[2023-12-31 11:03:11] -rw-------. 1 boinc boinc 2037760 31. Dez 11:03 result.tar.gz
11:03:12 (9917): run_atlas exited; CPU time 910.292550
11:03:12 (9917): called boinc_finish(0)
</stderr_txt>
]]>
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