| Name | ig9LDmBT9d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmyhIKDmnESUXo_0 |
| Workunit | 2373194 |
| Created | 31 Dec 2023, 11:47:38 UTC |
| Sent | 31 Dec 2023, 11:48:14 UTC |
| Report deadline | 7 Jan 2024, 11:48:14 UTC |
| Received | 31 Dec 2023, 12:11:45 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 4008 |
| Run time | 23 min 12 sec |
| CPU time | 15 min 50 sec |
| Validate state | Valid |
| Credit | 17.14 |
| Device peak FLOPS | 3.12 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.42 GB |
| Peak swap size | 2.14 GB |
| Peak disk usage | 78.37 MB |
Stderr output
<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
12:48:23 (19983): wrapper (7.7.26015): starting
12:48:23 (19983): wrapper: running run_atlas (--nthreads 1)
[2023-12-31 12:48:23] Arguments: --nthreads 1
[2023-12-31 12:48:23] Threads: 1
[2023-12-31 12:48:23] Checking for CVMFS
[2023-12-31 12:48:25] Probing /cvmfs/atlas.cern.ch... OK
[2023-12-31 12:48:26] Probing /cvmfs/atlas-condb.cern.ch... OK
[2023-12-31 12:48:26] Running cvmfs_config stat atlas.cern.ch
[2023-12-31 12:48:26] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2023-12-31 12:48:26] 2.6.3.0 20227 0 28184 127650 3 1 1630392 2816001 0 65024 0 0 n/a 0 0 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch http://10.116.178.201:3128 1
[2023-12-31 12:48:26] CVMFS is ok
[2023-12-31 12:48:26] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2023-12-31 12:48:26] Checking for apptainer binary...
[2023-12-31 12:48:26] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2023-12-31 12:48:26] apptainer is not installed, using version from CVMFS
[2023-12-31 12:48:26] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2023-12-31 12:48:27] HPi7COS7
[2023-12-31 12:48:27] apptainer works
[2023-12-31 12:48:27] Starting ATLAS job with PandaID=6065891551
[2023-12-31 12:48:27] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2023-12-31 13:11:33] *** The last 200 lines of the pilot log: ***
[2023-12-31 13:11:33] 2023-12-31 12:11:11,690 | DEBUG | pilot.control.job | send_state | data={'jobId': '6065891551', 'state': 'finished', 'timestamp': '2023-12-31T13:10:59+01:00', 'siteNam
[2023-12-31 13:11:33] 2023-12-31 12:11:11,692 | DEBUG | pilot.control.job | write_heartbeat_to_file | heartbeat dictionary: {'jobId': '6065891551', 'state': 'finished', 'timestamp': '2023-12-31T13:10:59
[2023-12-31 13:11:33] 2023-12-31 12:11:11,693 | DEBUG | pilot.control.job | write_heartbeat_to_file | wrote heartbeat to file: /var/lib/boinc/slots/0/heartbeat.json
[2023-12-31 13:11:33] 2023-12-31 12:11:11,693 | DEBUG | pilot.control.job | queue_monitor | job.completed=False
[2023-12-31 13:11:33] 2023-12-31 12:11:11,838 | INFO | pilot.control.job | make_job_report |
[2023-12-31 13:11:33] 2023-12-31 12:11:11,839 | INFO | pilot.control.job | make_job_report | job summary report
[2023-12-31 13:11:33] 2023-12-31 12:11:11,839 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-12-31 13:11:33] 2023-12-31 12:11:11,839 | INFO | pilot.control.job | make_job_report | PanDA job id: 6065891551
[2023-12-31 13:11:33] 2023-12-31 12:11:11,839 | INFO | pilot.control.job | make_job_report | task id: NULL
[2023-12-31 13:11:33] 2023-12-31 12:11:11,839 | INFO | pilot.control.job | make_job_report | errors: (none)
[2023-12-31 13:11:33] 2023-12-31 12:11:11,839 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2023-12-31 13:11:33] 2023-12-31 12:11:11,839 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 1013 s
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | nevents: 2
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | pid: 31158
[2023-12-31 13:11:33] 2023-12-31 12:11:11,840 | INFO | pilot.control.job | make_job_report | pgrp: 31158
[2023-12-31 13:11:33] 2023-12-31 12:11:11,841 | INFO | pilot.control.job | make_job_report | corecount: 1
[2023-12-31 13:11:33] 2023-12-31 12:11:11,841 | INFO | pilot.control.job | make_job_report | event service: False
[2023-12-31 13:11:33] 2023-12-31 12:11:11,841 | INFO | pilot.control.job | make_job_report | sizes: {0: 2399026, 1: 2399225, 2: 2399225, 10: 2399459, 12: 2399487, 1240: 2419289, 1241: 2419416,
[2023-12-31 13:11:33] 2023-12-31 12:11:11,841 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2023-12-31 13:11:33] 2023-12-31 12:11:11,842 | INFO | pilot.control.job | make_job_report |
[2023-12-31 13:11:33] 2023-12-31 12:11:11,842 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc/slots/0:
[2023-12-31 13:11:33]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,842 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc/slots/0
[2023-12-31 13:11:33] 2023-12-31 12:11:11,871 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 13:11:33] 2023-12-31 12:11:11,898 | DEBUG | pilot.control.job | has_job_completed | total 43232
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 594525 Dec 31 13:11 6c6cc538-52a3-4556-b279-a89fa4755164_31221.1.job.log
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 189221 Dec 31 13:10 6c6cc538-52a3-4556-b279-a89fa4755164_31221.1.job.log.tgz
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 36949600 Dec 31 12:48 EVNT.04972714._000039.pool.root.1
[2023-12-31 13:11:33] drwxrwx---. 2 boinc boinc 4096 Dec 31 13:10 PanDA_Pilot-6065891551/
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 0 Dec 31 12:49 agis_ddmendpoints.agis.ALL.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 983521 Dec 31 12:49 agis_schedconf.cvmfs.json
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 0 Dec 31 12:48 boinc_lockfile
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 8192 Dec 31 13:11 boinc_mmap_file
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 533 Dec 31 13:11 boinc_task_state.xml
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1338505 Dec 31 12:49 cric_ddmendpoints.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 6691 Dec 31 13:11 heartbeat.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 131 Dec 31 12:48 ig9LDmBT9d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmyhIKDmnESUXo.diag
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 6046 Dec 31 12:48 init_data.xml
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 488893 Dec 31 12:48 input.tar.gz
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 112 Dec 31 12:48 job.xml
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1018 Dec 31 13:10 memory_monitor_summary.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1573612 Dec 31 13:10 output.1.6c6cc538-52a3-4556-b279-a89fa4755164_31221.pool.root
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 464 Dec 31 13:10 output.list
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 2663 Dec 31 12:48 pandaJob.out
[2023-12-31 13:11:33] drwx------. 5 boinc boinc 4096 Dec 31 12:49 pilot3/
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 477391 Dec 31 12:47 pilot3.tar.gz
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 47 Dec 31 12:49 pilot_heartbeat.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 564948 Dec 31 13:11 pilotlog.txt
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 4388 Dec 31 12:47 queuedata.json
[2023-12-31 13:11:33] -rwxr-xr-x. 1 boinc boinc 7986 Dec 31 12:48 run_atlas*
[2023-12-31 13:11:33] -rwx------. 1 boinc boinc 27437 Dec 31 12:47 runpilot2-wrapper.sh*
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 407 Dec 31 12:48 runtime_log
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 7733 Dec 31 12:48 runtime_log.err
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 424 Dec 31 12:48 setup.sh.local
[2023-12-31 13:11:33] drwxrwx--x. 2 boinc boinc 68 Dec 31 12:48 shared/
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 17646 Dec 31 12:48 start_atlas.sh
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 1740 Dec 31 12:48 stderr.txt
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 107 Dec 31 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 25 Dec 31 13:11 wrapper_checkpoint.txt
[2023-12-31 13:11:33] 2023-12-31 12:11:11,899 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,899 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,899 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,899 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,899 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,900 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,900 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,900 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,900 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,900 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,900 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,901 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,901 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,901 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,901 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,901 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,901 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,902 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2023-12-31 13:11:33] 2023-12-31 12:11:11,902 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,902 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2023-12-31 13:11:33] 2023-12-31 12:11:11,902 | INFO | pilot.control.job | has_job_completed | job 6065891551 has completed (purged errors)
[2023-12-31 13:11:33] 2023-12-31 12:11:11,902 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2023-12-31 13:11:33] 2023-12-31 12:11:11,903 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2023-12-31 13:11:33] 2023-12-31 12:11:11,907 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc/slots/0/PanDA_Pilot-6065891551
[2023-12-31 13:11:33] 2023-12-31 12:11:12,541 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1345.1809689998627 s) - must update
[2023-12-31 13:11:33] 2023-12-31 12:11:12,914 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [31158]
[2023-12-31 13:11:33] 2023-12-31 12:11:12,914 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 31158
[2023-12-31 13:11:33] 2023-12-31 12:11:12,914 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2023-12-31 13:11:33] 2023-12-31 12:11:13,920 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2023-12-31 13:11:33] 2023-12-31 12:11:13,921 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=31158
[2023-12-31 13:11:33] 2023-12-31 12:11:13,940 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 13:11:33] 2023-12-31 12:11:14,043 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [31158] (in reverse order)
[2023-12-31 13:11:33] 2023-12-31 12:11:14,052 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 13:11:33] 2023-12-31 12:11:14,112 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2023-12-31 13:11:33] 2023-12-31 12:11:14,113 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2023-12-31 13:11:33] 2023-12-31 12:11:14,118 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 31158
[2023-12-31 13:11:33] 2023-12-31 12:11:14,123 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 31158
[2023-12-31 13:11:33] 2023-12-31 12:11:14,125 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2023-12-31 13:11:33] 2023-12-31 12:11:14,125 | INFO | pilot.control.job | retrieve | ready for new job
[2023-12-31 13:11:33] 2023-12-31 12:11:14,126 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2023-12-31 13:11:33] 2023-12-31 12:11:14,132 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 13:11:33] 2023-12-31 12:11:14,133 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.7.1.22 ***
[2023-12-31 13:11:33] 2023-12-31 12:11:14,134 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 13:11:33] 2023-12-31 12:11:14,134 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2023-12-31 13:11:33] 2023-12-31 12:11:14,134 | INFO | pilot.util.auxiliary | pilot_version_banner | pilot is running in a VM
[2023-12-31 13:11:33] 2023-12-31 12:11:14,134 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2023-12-31 13:11:33] 2023-12-31 12:11:14,135 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2023-12-31 13:11:33] 2023-12-31 12:11:14,150 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 13:11:33] 2023-12-31 12:11:14,164 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2023-12-31 13:11:33] NAME="CentOS Linux"
[2023-12-31 13:11:33] VERSION="7 (Core)"
[2023-12-31 13:11:33] ID="centos"
[2023-12-31 13:11:33] ID_LIKE="rhel fedora"
[2023-12-31 13:11:33] VERSION_ID="7"
[2023-12-31 13:11:33] PRETTY_NAME="CentOS Linux 7 (Core)"
[2023-12-31 13:11:33] ANSI_COLOR="0;31"
[2023-12-31 13:11:33] CPE_NAME="cpe:/o:centos:centos:7"
[2023-12-31 13:11:33] HOME_URL="https://www.centos.org/"
[2023-12-31 13:11:33] BUG_REPORT_URL="https://bugs.centos.org/"
[2023-12-31 13:11:33]
[2023-12-31 13:11:33] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2023-12-31 13:11:33] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2023-12-31 13:11:33] REDHAT_SUPPORT_PRODUCT="centos"
[2023-12-31 13:11:33] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2023-12-31 13:11:33]
[2023-12-31 13:11:33] 2023-12-31 12:11:14,164 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2023-12-31 13:11:33] 2023-12-31 12:11:14,552 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1347.1915831565857 s) - must update
[2023-12-31 13:11:33] 2023-12-31 12:11:14,673 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc/slots/0
[2023-12-31 13:11:33] 2023-12-31 12:11:14,674 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc/slots/0
[2023-12-31 13:11:33] 2023-12-31 12:11:14,702 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2023-12-31 13:11:33] 2023-12-31 12:11:14,723 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2023-12-31 13:11:33] /dev/mapper/centos-root 22002 11193 10809 51% /var/lib/boinc/slots/0
[2023-12-31 13:11:33] 2023-12-31 12:11:14,723 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2023-12-31 13:11:33] 2023-12-31 12:11:14,723 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (11334057984 B)
[2023-12-31 13:11:33] 2023-12-31 12:11:14,724 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2023-12-31 13:11:33] 2023-12-31 12:11:14,724 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2023-12-31 13:11:33] 2023-12-31 12:11:14,724 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2023-12-31 13:11:33] 2023-12-31 12:11:14,724 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2023-12-31 13:11:33] 2023-12-31 12:11:14,725 | WARNING | pilot.control.monitor | run_checks | too much time has passed since last successful pilot heartbeat (1347.3648519515991 s) - must update
[2023-12-31 13:11:33] 2023-12-31 12:11:14,725 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues
[2023-12-31 13:11:33] 2023-12-31 12:11:14,725 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set
[2023-12-31 13:11:33] 2023-12-31 12:11:14,725 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish
[2023-12-31 13:11:33] 2023-12-31 12:11:14,997 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2023-12-31 13:11:33] 2023-12-31 12:11:15,352 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2023-12-31 13:11:33] 2023-12-31 12:11:15,642 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2023-12-31 13:11:33] 2023-12-31 12:11:15,642 | INFO | pilot.control.job | job_monitor | aborting loop
[2023-12-31 13:11:33] 2023-12-31 12:11:15,734 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:15,818 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,008 | INFO | pilot.control.data | control | [data] control thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,009 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,009 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,058 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,083 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2023-12-31 13:11:33] 2023-12-31 12:11:16,197 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2023-12-31 13:11:33] 2023-12-31 12:11:16,203 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,648 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,738 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:16,862 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2023-12-31 13:11:33] 2023-12-31 12:11:17,015 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:17,090 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:17,117 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:17,209 | INFO | pilot.control.job | control | [job] control thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:17,875 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:19,377 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:24,858 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2023-12-31 13:11:33] 2023-12-31 12:11:24,858 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2023-12-31 13:11:33] 2023-12-31 12:11:24,858 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2023-12-31 13:11:33] 2023-12-31 12:11:25,868 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2023-12-31 13:11:33] 2023-12-31 12:11:27,306 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139791
[2023-12-31 13:11:33] 2023-12-31 12:11:27,306 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted
[2023-12-31 13:11:33] 2023-12-31 12:11:27,809 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring
[2023-12-31 13:11:33] 2023-12-31 12:11:27,810 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2023-12-31 13:11:33] 2023-12-31 12:11:32,309 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2023-12-31 13:11:33] 2023-12-31 12:11:32,310 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2023-12-31 13:11:33] 2023-12-31 12:11:32,390 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(24227)---pstree(8660)
[2023-12-31 13:11:33]
[2023-12-31 13:11:33] 2023-12-31 12:11:32,391 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[24227, 8660]
[2023-12-31 13:11:33] 2023-12-31 12:11:32,440 | DEBUG | pilot.util.processgroups | is_defunct | 24227: return code=0, stdout=SN
[2023-12-31 13:11:33] , stderr=
[2023-12-31 13:11:33] 2023-12-31 12:11:32,515 | DEBUG | pilot.util.processgroups | is_defunct | 8660: return code=1, stdout=, stderr=
[2023-12-31 13:11:33] 2023-12-31 12:11:32,515 | INFO | root | list_zombies | no defunct processes were found
[2023-12-31 13:11:33] 2023-12-31 12:11:32,515 | INFO | root | wrap_up | traces error code: 0
[2023-12-31 13:11:33] 2023-12-31 12:11:32,515 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0)
[2023-12-31 13:11:33] 2023-12-31 12:11:32,652 [wrapper] ==== pilot stdout END ====
[2023-12-31 13:11:33] 2023-12-31 12:11:32,659 [wrapper] ==== wrapper stdout RESUME ====
[2023-12-31 13:11:33] 2023-12-31 12:11:32,666 [wrapper] pilotpid: 24227
[2023-12-31 13:11:33] 2023-12-31 12:11:32,672 [wrapper] Pilot exit status: 0
[2023-12-31 13:11:33] 2023-12-31 12:11:32,695 [wrapper] pandaids: 6065891551
[2023-12-31 13:11:33] 2023-12-31 12:11:32,706 [wrapper] apfmon messages muted
[2023-12-31 13:11:33] 2023-12-31 12:11:32,722 [wrapper] Test setup, not cleaning
[2023-12-31 13:11:33] 2023-12-31 12:11:32,726 [wrapper] ==== wrapper stdout END ====
[2023-12-31 13:11:33] 2023-12-31 12:11:32,731 [wrapper] ==== wrapper stderr END ====
[2023-12-31 13:11:33] 2023-12-31 12:11:32,764 [wrapper] wrapperexiting ec=0, duration=1384
[2023-12-31 13:11:33] 2023-12-31 12:11:32,784 [wrapper] apfmon messages muted
[2023-12-31 13:11:33] *** Error codes and diagnostics ***
[2023-12-31 13:11:33] "exeErrorCode": 0,
[2023-12-31 13:11:33] "exeErrorDiag": "",
[2023-12-31 13:11:33] "pilotErrorCode": 0,
[2023-12-31 13:11:33] "pilotErrorDiag": "",
[2023-12-31 13:11:33] *** Listing of results directory ***
[2023-12-31 13:11:33] insgesamt 44164
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 4388 31. Dez 12:47 queuedata.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 477391 31. Dez 12:47 pilot3.tar.gz
[2023-12-31 13:11:33] -rwx------. 1 boinc boinc 27437 31. Dez 12:47 runpilot2-wrapper.sh
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 107 31. Dez 12:48 wrapper_26015_x86_64-pc-linux-gnu
[2023-12-31 13:11:33] -rwxr-xr-x. 1 boinc boinc 7986 31. Dez 12:48 run_atlas
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 112 31. Dez 12:48 job.xml
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 488893 31. Dez 12:48 input.tar.gz
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 6046 31. Dez 12:48 init_data.xml
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 36949600 31. Dez 12:48 EVNT.04972714._000039.pool.root.1
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 17646 31. Dez 12:48 start_atlas.sh
[2023-12-31 13:11:33] drwxrwx--x. 2 boinc boinc 68 31. Dez 12:48 shared
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 0 31. Dez 12:48 boinc_lockfile
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 2663 31. Dez 12:48 pandaJob.out
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 424 31. Dez 12:48 setup.sh.local
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 0 31. Dez 12:49 agis_ddmendpoints.agis.ALL.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1338505 31. Dez 12:49 cric_ddmendpoints.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 47 31. Dez 12:49 pilot_heartbeat.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 983521 31. Dez 12:49 agis_schedconf.cvmfs.json
[2023-12-31 13:11:33] drwx------. 5 boinc boinc 4096 31. Dez 12:49 pilot3
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1573612 31. Dez 13:10 output.1.6c6cc538-52a3-4556-b279-a89fa4755164_31221.pool.root
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1018 31. Dez 13:10 memory_monitor_summary.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 189221 31. Dez 13:10 6c6cc538-52a3-4556-b279-a89fa4755164_31221.1.job.log.tgz
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 533 31. Dez 13:11 boinc_task_state.xml
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 8192 31. Dez 13:11 boinc_mmap_file
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 25 31. Dez 13:11 wrapper_checkpoint.txt
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 6691 31. Dez 13:11 heartbeat.json
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 9924 31. Dez 13:11 pilotlog.txt
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 613429 31. Dez 13:11 6c6cc538-52a3-4556-b279-a89fa4755164_31221.1.job.log
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 464 31. Dez 13:11 output.list
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 748 31. Dez 13:11 runtime_log
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 2396160 31. Dez 13:11 result.tar.gz
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 11844 31. Dez 13:11 runtime_log.err
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 633 31. Dez 13:11 ig9LDmBT9d4n7Olcko1bjSoqABFKDmABFKDmyeZQDmyhIKDmnESUXo.diag
[2023-12-31 13:11:33] -rw-r--r--. 1 boinc boinc 29272 31. Dez 13:11 stderr.txt
[2023-12-31 13:11:33] HITS file was successfully produced:
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1573612 31. Dez 13:10 shared/HITS.pool.root.1
[2023-12-31 13:11:33] *** Contents of shared directory: ***
[2023-12-31 13:11:33] insgesamt 40464
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 488893 31. Dez 12:48 input.tar.gz
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 36949600 31. Dez 12:48 ATLAS.root_0
[2023-12-31 13:11:33] -rw-r--r--. 2 boinc boinc 17646 31. Dez 12:48 start_atlas.sh
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 1573612 31. Dez 13:10 HITS.pool.root.1
[2023-12-31 13:11:33] -rw-------. 1 boinc boinc 2396160 31. Dez 13:11 result.tar.gz
13:11:34 (19983): run_atlas exited; CPU time 950.465509
13:11:34 (19983): called boinc_finish(0)
</stderr_txt>
]]>
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