Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
01:41:27 (5604): wrapper (7.7.26015): starting
01:41:27 (5604): wrapper: running run_atlas (--nthreads 1)
[2024-01-07 01:41:27] Arguments: --nthreads 1
[2024-01-07 01:41:27] Threads: 1
[2024-01-07 01:41:27] Checking for CVMFS
[2024-01-07 01:41:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-01-07 01:41:31] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-01-07 01:41:31] Running cvmfs_config stat atlas.cern.ch
[2024-01-07 01:41:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-01-07 01:41:32] 2.11.2.0 5843 0 26568 127883 3 1 1769459 4096001 0 130560 0 0 0.000 962 767 http://s1ral-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-01-07 01:41:32] CVMFS is ok
[2024-01-07 01:41:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-01-07 01:41:32] Small home clusters do not require a local http proxy but it is suggested if
[2024-01-07 01:41:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-01-07 01:41:32] Further information can be found at the LHC@home message board.
[2024-01-07 01:41:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-01-07 01:41:32] Checking for apptainer binary...
[2024-01-07 01:41:32] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2024-01-07 01:41:32] apptainer is not installed, using version from CVMFS
[2024-01-07 01:41:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-01-07 01:41:34] HPi7COS7
[2024-01-07 01:41:34] apptainer works
[2024-01-07 01:41:34] Starting ATLAS job with PandaID=6070827033
[2024-01-07 01:41:34] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-01-07 02:10:05]  *** The last 200 lines of the pilot log: ***
[2024-01-07 02:10:05] 2024-01-07 01:09:03,560 | INFO     | monitor loop #245: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:03,562 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:06,072 | INFO     | monitor loop #246: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:06,073 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:08,599 | INFO     | monitor loop #247: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:08,600 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:11,114 | INFO     | monitor loop #248: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:11,115 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:13,627 | INFO     | monitor loop #249: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:13,627 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:16,133 | INFO     | monitor loop #250: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:16,134 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:18,667 | INFO     | monitor loop #251: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:18,667 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:21,179 | INFO     | monitor loop #252: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:21,183 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:23,708 | INFO     | monitor loop #253: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:23,709 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:25,843 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-01-07 02:10:05] 2024-01-07 01:09:26,225 | INFO     | monitor loop #254: job 0:6070827033 is in state 'stageout'
[2024-01-07 02:10:05] 2024-01-07 01:09:26,229 | WARNING  | aborting job monitor tasks since payload process 16062 is not running
[2024-01-07 02:10:05] 2024-01-07 01:09:26,299 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-01-07 02:10:05] 2024-01-07 01:09:26,299 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2024-01-07 02:10:05] 2024-01-07 01:09:26,413 | INFO     | transferring file 581be027-261f-4477-b435-3d899f049745_30205.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-6070827033/581be027-261f-4477-b435-3d899f049745_
[2024-01-07 02:10:05] 2024-01-07 01:09:26,413 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6070827033/581be027-261f-4477-b435-3d899f049745_30205.1.job.log.tgz /var/lib/boinc/slots/0/58
[2024-01-07 02:10:05] 2024-01-07 01:09:26,481 | INFO     | Adding to output.list: 581be027-261f-4477-b435-3d899f049745_30205.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/90/4c/581be027-261f-
[2024-01-07 02:10:05] 2024-01-07 01:09:26,482 | INFO     | summary of transferred files:
[2024-01-07 02:10:05] 2024-01-07 01:09:26,482 | INFO     |  -- lfn=581be027-261f-4477-b435-3d899f049745_30205.1.job.log.tgz, status_code=0, status=transferred
[2024-01-07 02:10:05] 2024-01-07 01:09:26,482 | INFO     | stage-out finished correctly
[2024-01-07 02:10:05] 2024-01-07 01:09:28,283 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-01-07 02:10:05] 2024-01-07 01:09:28,746 | INFO     | monitor loop #255: job 0:6070827033 is in state 'finished'
[2024-01-07 02:10:05] 2024-01-07 01:09:28,746 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-07 02:10:05] 2024-01-07 01:09:29,198 | INFO     | job 6070827033 has state=finished
[2024-01-07 02:10:05] 2024-01-07 01:09:29,198 | INFO     | preparing for final server update for job 6070827033 in state='finished'
[2024-01-07 02:10:05] 2024-01-07 01:09:29,199 | INFO     | this job has now completed (state=finished)
[2024-01-07 02:10:05] 2024-01-07 01:09:29,199 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-01-07 02:10:05] 2024-01-07 01:09:29,199 | INFO     | job 6070827033 has finished - writing final server update
[2024-01-07 02:10:05] 2024-01-07 01:09:29,199 | INFO     | total number of processed events: 2 (read)
[2024-01-07 02:10:05] 2024-01-07 01:09:29,202 | INFO     | executing command: lscpu
[2024-01-07 02:10:05] 2024-01-07 01:09:29,239 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2024-01-07 02:10:05] 2024-01-07 01:09:29,240 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-01-07 02:10:05] 2024-01-07 01:09:29,322 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-01-07 02:10:05] 2024-01-07 01:09:31,258 | INFO     | monitor loop #256: job 0:6070827033 is in state 'finished'
[2024-01-07 02:10:05] 2024-01-07 01:09:31,259 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-07 02:10:05] 2024-01-07 01:09:33,779 | INFO     | monitor loop #257: job 0:6070827033 is in state 'finished'
[2024-01-07 02:10:05] 2024-01-07 01:09:33,779 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-07 02:10:05] 2024-01-07 01:09:36,288 | INFO     | monitor loop #258: job 0:6070827033 is in state 'finished'
[2024-01-07 02:10:05] 2024-01-07 01:09:36,292 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-07 02:10:05] 2024-01-07 01:09:38,799 | INFO     | monitor loop #259: job 0:6070827033 is in state 'finished'
[2024-01-07 02:10:05] 2024-01-07 01:09:38,803 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-07 02:10:05] 2024-01-07 01:09:41,310 | INFO     | monitor loop #260: job 0:6070827033 is in state 'finished'
[2024-01-07 02:10:05] 2024-01-07 01:09:41,311 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-07 02:10:05] 2024-01-07 01:09:42,616 | INFO     | CPU arch script returned: x86-64-v2
[2024-01-07 02:10:05] 2024-01-07 01:09:42,616 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6070827033/memory_monitor_summary.json (trf name=prmon)
[2024-01-07 02:10:05] 2024-01-07 01:09:42,618 | INFO     | extracted standard info from prmon json
[2024-01-07 02:10:05] 2024-01-07 01:09:42,618 | INFO     | extracted standard memory fields from prmon json
[2024-01-07 02:10:05] 2024-01-07 01:09:42,619 | INFO     | fitting pss+swap vs Time
[2024-01-07 02:10:05] 2024-01-07 01:09:42,619 | INFO     | current memory leak: 2604.54 B/s (using 9 data points, chi2=0.05)
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | ..............................
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | . Timing measurements:
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | . get job = 63 s
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | . initial setup = 73 s
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | . payload setup = 15 s
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | . stage-in = 52 s
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | . payload execution = 981 s
[2024-01-07 02:10:05] 2024-01-07 01:09:42,620 | INFO     | . stage-out = 423 s
[2024-01-07 02:10:05] 2024-01-07 01:09:42,621 | INFO     | . log creation = 0 s
[2024-01-07 02:10:05] 2024-01-07 01:09:42,621 | INFO     | ..............................
[2024-01-07 02:10:05] 2024-01-07 01:09:43,045 | INFO     | 
[2024-01-07 02:10:05] 2024-01-07 01:09:43,045 | INFO     | job summary report
[2024-01-07 02:10:05] 2024-01-07 01:09:43,045 | INFO     | --------------------------------------------------
[2024-01-07 02:10:05] 2024-01-07 01:09:43,045 | INFO     | PanDA job id: 6070827033
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | task id: NULL
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | errors: (none)
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | status: LOG_TRANSFER = DONE 
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | pilot state: finished 
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | transexitcode: 0
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | exeerrorcode: 0
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | exeerrordiag: 
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | exitcode: 0
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | exitmsg: OK
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | cpuconsumptiontime: 542 s
[2024-01-07 02:10:05] 2024-01-07 01:09:43,046 | INFO     | nevents: 2
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | neventsw: 0
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | pid: 16062
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | pgrp: 16062
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | corecount: 1
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | event service: False
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | sizes: {0: 2397465, 1: 2399001, 2: 2399029, 13: 2399175, 24: 2399231, 35: 2399259, 45: 2399415, 56: 2399443, 62: 2399531, 67: 2399559, 1001: 2422378, 1425: 2431428
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | --------------------------------------------------
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | 
[2024-01-07 02:10:05] 2024-01-07 01:09:43,047 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-01-07 02:10:05] 2024-01-07 01:09:43,127 | INFO     | queue jobs had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,128 | INFO     | queue payloads had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,128 | INFO     | queue data_in had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,129 | INFO     | queue data_out had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,129 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,129 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,130 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,130 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,131 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,131 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,132 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,132 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,132 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,133 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,133 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,134 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,134 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,135 | INFO     | queue completed_jobids has 1 job(s)
[2024-01-07 02:10:05] 2024-01-07 01:09:43,135 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,136 | INFO     | queue messages had 0 job(s) [purged]
[2024-01-07 02:10:05] 2024-01-07 01:09:43,136 | INFO     | job 6070827033 has completed (purged errors)
[2024-01-07 02:10:05] 2024-01-07 01:09:43,137 | INFO     | overall cleanup function is called
[2024-01-07 02:10:05] 2024-01-07 01:09:44,158 | INFO     | --- collectZombieJob: --- 10, [16062]
[2024-01-07 02:10:05] 2024-01-07 01:09:44,159 | INFO     | zombie collector waiting for pid 16062
[2024-01-07 02:10:05] 2024-01-07 01:09:44,159 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-01-07 02:10:05] 2024-01-07 01:09:45,168 | INFO     | collected zombie processes
[2024-01-07 02:10:05] 2024-01-07 01:09:45,170 | INFO     | will now attempt to kill all subprocesses of pid=16062
[2024-01-07 02:10:05] 2024-01-07 01:09:45,280 | INFO     | process IDs to be killed: [16062] (in reverse order)
[2024-01-07 02:10:05] 2024-01-07 01:09:45,361 | WARNING  | found no corresponding commands to process id(s)
[2024-01-07 02:10:05] 2024-01-07 01:09:45,361 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-01-07 02:10:05] 2024-01-07 01:09:45,363 | INFO     | did not find any defunct processes belonging to 16062
[2024-01-07 02:10:05] 2024-01-07 01:09:45,366 | INFO     | did not find any defunct processes belonging to 16062
[2024-01-07 02:10:05] 2024-01-07 01:09:45,366 | INFO     | ready for new job
[2024-01-07 02:10:05] 2024-01-07 01:09:45,366 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-01-07 02:10:05] 2024-01-07 01:09:45,368 | INFO     | **************************************
[2024-01-07 02:10:05] 2024-01-07 01:09:45,368 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-01-07 02:10:05] 2024-01-07 01:09:45,368 | INFO     | **************************************
[2024-01-07 02:10:05] 2024-01-07 01:09:45,368 | INFO     | 
[2024-01-07 02:10:05] 2024-01-07 01:09:45,369 | INFO     | pilot is running in a VM
[2024-01-07 02:10:05] 2024-01-07 01:09:45,369 | INFO     | architecture information:
[2024-01-07 02:10:05] 2024-01-07 01:09:45,369 | INFO     | executing command: cat /etc/os-release
[2024-01-07 02:10:05] 2024-01-07 01:09:45,389 | INFO     | cat /etc/os-release:
[2024-01-07 02:10:05] NAME="CentOS Linux"
[2024-01-07 02:10:05] VERSION="7 (Core)"
[2024-01-07 02:10:05] ID="centos"
[2024-01-07 02:10:05] ID_LIKE="rhel fedora"
[2024-01-07 02:10:05] VERSION_ID="7"
[2024-01-07 02:10:05] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-01-07 02:10:05] ANSI_COLOR="0;31"
[2024-01-07 02:10:05] CPE_NAME="cpe:/o:centos:centos:7"
[2024-01-07 02:10:05] HOME_URL="https://www.centos.org/"
[2024-01-07 02:10:05] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-01-07 02:10:05] 
[2024-01-07 02:10:05] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-01-07 02:10:05] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-01-07 02:10:05] REDHAT_SUPPORT_PRODUCT="centos"
[2024-01-07 02:10:05] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-01-07 02:10:05] 
[2024-01-07 02:10:05] 2024-01-07 01:09:45,389 | INFO     | **************************************
[2024-01-07 02:10:05] 2024-01-07 01:09:45,894 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-01-07 02:10:05] 2024-01-07 01:09:45,935 | INFO     | sufficient remaining disk space (11109662720 B)
[2024-01-07 02:10:05] 2024-01-07 01:09:45,936 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-01-07 02:10:05] 2024-01-07 01:09:45,936 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-01-07 02:10:05] 2024-01-07 01:09:45,937 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-01-07 02:10:05] 2024-01-07 01:09:45,937 | INFO     | found 0 job(s) in 20 queues
[2024-01-07 02:10:05] 2024-01-07 01:09:45,937 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-01-07 02:10:05] 2024-01-07 01:09:45,938 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-01-07 02:10:05] 2024-01-07 01:09:46,349 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-01-07 02:10:05] 2024-01-07 01:09:46,350 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-01-07 02:10:05] 2024-01-07 01:09:46,350 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-01-07 02:10:05] 2024-01-07 01:09:46,351 | INFO     | will abort loop
[2024-01-07 02:10:05] 2024-01-07 01:09:46,944 | INFO     | [job] retrieve thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:47,197 | INFO     | [payload] execute_payloads thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:47,299 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-01-07 02:10:05] 2024-01-07 01:09:47,323 | INFO     | [payload] failed_post thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:47,341 | INFO     | [payload] control thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:47,357 | INFO     | [job] job monitor thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:47,607 | INFO     | [payload] validate_post thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:47,795 | INFO     | [job] validate thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:47,873 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-01-07 02:10:05] 2024-01-07 01:09:48,002 | INFO     | [data] copytool_in thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:48,023 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-01-07 02:10:05] 2024-01-07 01:09:48,065 | INFO     | [data] control thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:48,087 | INFO     | [job] create_data_payload thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:48,179 | INFO     | [job] control thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:48,397 | INFO     | [payload] validate_pre thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:48,885 | INFO     | [job] queue monitor thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:49,309 | INFO     | [data] copytool_out thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:52,048 | INFO     | [data] queue_monitor thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:56,796 | INFO     | job.realtimelogging is not enabled
[2024-01-07 02:10:05] 2024-01-07 01:09:57,805 | INFO     | [payload] run_realtimelog thread has finished
[2024-01-07 02:10:05] 2024-01-07 01:09:58,656 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140110402672448)>', '<ExcThread(monitor, started 140109676537600)>']
[2024-01-07 02:10:05] 2024-01-07 01:09:59,090 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-01-07 02:10:05] 2024-01-07 01:09:59,090 | INFO     | [monitor] control thread has ended
[2024-01-07 02:10:05] 2024-01-07 01:10:03,684 | INFO     | end of generic workflow (traces error code: 0)
[2024-01-07 02:10:05] 2024-01-07 01:10:03,684 | INFO     | traces error code: 0
[2024-01-07 02:10:05] 2024-01-07 01:10:03,685 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-01-07 02:10:05] 2024-01-07 01:10:03,839 [wrapper] ==== pilot stdout END ====
[2024-01-07 02:10:05] 2024-01-07 01:10:03,859 [wrapper] ==== wrapper stdout RESUME ====
[2024-01-07 02:10:05] 2024-01-07 01:10:03,862 [wrapper] pilotpid: 9809
[2024-01-07 02:10:05] 2024-01-07 01:10:03,871 [wrapper] Pilot exit status: 0
[2024-01-07 02:10:05] 2024-01-07 01:10:03,907 [wrapper] pandaids: 6070827033
[2024-01-07 02:10:05] 2024-01-07 01:10:03,931 [wrapper] apfmon messages muted
[2024-01-07 02:10:05] 2024-01-07 01:10:03,934 [wrapper] Test setup, not cleaning
[2024-01-07 02:10:05] 2024-01-07 01:10:03,952 [wrapper] ==== wrapper stdout END ====
[2024-01-07 02:10:05] 2024-01-07 01:10:03,956 [wrapper] ==== wrapper stderr END ====
[2024-01-07 02:10:05] 2024-01-07 01:10:03,969 [wrapper] wrapperexiting ec=0, duration=1708
[2024-01-07 02:10:05] 2024-01-07 01:10:03,974 [wrapper] apfmon messages muted
[2024-01-07 02:10:05]  *** Error codes and diagnostics ***
[2024-01-07 02:10:05]     "exeErrorCode": 0,
[2024-01-07 02:10:05]     "exeErrorDiag": "",
[2024-01-07 02:10:05]     "pilotErrorCode": 0,
[2024-01-07 02:10:05]     "pilotErrorDiag": "",
[2024-01-07 02:10:05]  *** Listing of results directory ***
[2024-01-07 02:10:05] insgesamt 44536
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc   441289  6. Jan 22:35 pilot3.tar.gz
[2024-01-07 02:10:05] -rwx------. 1 boinc boinc    27439  6. Jan 22:57 runpilot2-wrapper.sh
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc     4388  6. Jan 22:57 queuedata.json
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc      107  7. Jan 01:41 wrapper_26015_x86_64-pc-linux-gnu
[2024-01-07 02:10:05] -rwxr-xr-x. 1 boinc boinc     7986  7. Jan 01:41 run_atlas
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc      112  7. Jan 01:41 job.xml
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc     6046  7. Jan 01:41 init_data.xml
[2024-01-07 02:10:05] -rw-r--r--. 2 boinc boinc 37965264  7. Jan 01:41 EVNT.04972714._000027.pool.root.1
[2024-01-07 02:10:05] -rw-r--r--. 2 boinc boinc    17618  7. Jan 01:41 start_atlas.sh
[2024-01-07 02:10:05] drwxrwx--x. 2 boinc boinc       68  7. Jan 01:41 shared
[2024-01-07 02:10:05] -rw-r--r--. 2 boinc boinc   452830  7. Jan 01:41 input.tar.gz
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc        0  7. Jan 01:41 boinc_lockfile
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc     2682  7. Jan 01:41 pandaJob.out
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc      424  7. Jan 01:41 setup.sh.local
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc  1338505  7. Jan 01:43 cric_ddmendpoints.json
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc   951649  7. Jan 01:43 agis_schedconf.cvmfs.json
[2024-01-07 02:10:05] drwx------. 4 boinc boinc     4096  7. Jan 01:44 pilot3
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc  1750569  7. Jan 02:02 output.1.581be027-261f-4477-b435-3d899f049745_30205.pool.root
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc     1020  7. Jan 02:02 memory_monitor_summary.json
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc      533  7. Jan 02:02 boinc_task_state.xml
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc   179491  7. Jan 02:05 581be027-261f-4477-b435-3d899f049745_30205.1.job.log.tgz
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc     8192  7. Jan 02:09 boinc_mmap_file
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc       25  7. Jan 02:09 wrapper_checkpoint.txt
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc     7580  7. Jan 02:09 heartbeat.json
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc     4344  7. Jan 02:10 pilotlog.txt
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc   190705  7. Jan 02:10 581be027-261f-4477-b435-3d899f049745_30205.1.job.log
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc      464  7. Jan 02:10 output.list
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc      748  7. Jan 02:10 runtime_log
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc  2140160  7. Jan 02:10 result.tar.gz
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc    11836  7. Jan 02:10 runtime_log.err
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc      629  7. Jan 02:10 rU0KDmqqTg4n7Olcko1bjSoqABFKDmABFKDmyeZQDmO4IKDmXL8Z8m.diag
[2024-01-07 02:10:05] -rw-r--r--. 1 boinc boinc    23104  7. Jan 02:10 stderr.txt
[2024-01-07 02:10:05] HITS file was successfully produced:
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc 1750569  7. Jan 02:02 shared/HITS.pool.root.1
[2024-01-07 02:10:05]  *** Contents of shared directory: ***
[2024-01-07 02:10:05] insgesamt 41344
[2024-01-07 02:10:05] -rw-r--r--. 2 boinc boinc 37965264  7. Jan 01:41 ATLAS.root_0
[2024-01-07 02:10:05] -rw-r--r--. 2 boinc boinc    17618  7. Jan 01:41 start_atlas.sh
[2024-01-07 02:10:05] -rw-r--r--. 2 boinc boinc   452830  7. Jan 01:41 input.tar.gz
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc  1750569  7. Jan 02:02 HITS.pool.root.1
[2024-01-07 02:10:05] -rw-------. 1 boinc boinc  2140160  7. Jan 02:10 result.tar.gz
02:10:07 (5604): run_atlas exited; CPU time 506.026488
02:10:07 (5604): called boinc_finish(0)

</stderr_txt>
]]>

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