Stderr output

<core_client_version>7.16.1</core_client_version>
<![CDATA[
<stderr_txt>
03:29:35 (27376): wrapper (7.7.26015): starting
03:29:35 (27376): wrapper: running run_atlas (--nthreads 1)
[2024-01-19 03:29:35] Arguments: --nthreads 1
[2024-01-19 03:29:35] Threads: 1
[2024-01-19 03:29:35] Checking for CVMFS
[2024-01-19 03:29:39] Probing /cvmfs/atlas.cern.ch... OK
[2024-01-19 03:29:49] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-01-19 03:29:49] Running cvmfs_config stat atlas.cern.ch
[2024-01-19 03:29:50] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-01-19 03:29:50] 2.11.2.0 27612 0 28608 128343 3 1 2670026 4096000 0 130560 0 0 0.000 962 427 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-01-19 03:29:50] CVMFS is ok
[2024-01-19 03:29:50] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-01-19 03:29:50] Small home clusters do not require a local http proxy but it is suggested if
[2024-01-19 03:29:50] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-01-19 03:29:50] Further information can be found at the LHC@home message board.
[2024-01-19 03:29:50] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-01-19 03:29:50] Checking for apptainer binary...
[2024-01-19 03:29:50] which: no apptainer in (/usr/local/sbin:/usr/local/bin:/usr/sbin:/usr/bin)
[2024-01-19 03:29:50] apptainer is not installed, using version from CVMFS
[2024-01-19 03:29:50] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-01-19 03:29:51] HPi7COS7
[2024-01-19 03:29:51] apptainer works
[2024-01-19 03:29:52] Starting ATLAS job with PandaID=6081893718
[2024-01-19 03:29:52] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc/slots/0 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-01-19 03:36:31]  *** The last 200 lines of the pilot log: ***
[2024-01-19 03:36:31] 2024-01-19 02:35:35,783 | INFO     | monitor loop #69: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:35,784 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:38,079 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-01-19 03:36:31] 2024-01-19 02:35:38,235 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-01-19 03:36:31] 2024-01-19 02:35:38,236 | INFO     | will try again after 20s..
[2024-01-19 03:36:31] 2024-01-19 02:35:38,307 | INFO     | monitor loop #70: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:38,307 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:40,835 | INFO     | monitor loop #71: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:40,836 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:43,340 | INFO     | monitor loop #72: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:43,340 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:45,844 | INFO     | monitor loop #73: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:45,845 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:48,357 | INFO     | monitor loop #74: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:48,357 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:48,839 | INFO     | 327s have passed since pilot start
[2024-01-19 03:36:31] 2024-01-19 02:35:50,869 | INFO     | monitor loop #75: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:50,869 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:53,404 | INFO     | monitor loop #76: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:53,406 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:55,919 | INFO     | monitor loop #77: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:55,920 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:58,335 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-01-19 03:36:31] 2024-01-19 02:35:58,417 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-01-19 03:36:31] 2024-01-19 02:35:58,419 | WARNING  | cache file=/var/lib/boinc/slots/0/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc/slots/0/agis_ddmendpoints.
[2024-01-19 03:36:31] 2024-01-19 02:35:58,505 | INFO     | monitor loop #78: job 0:6081893718 is in state 'stageout'
[2024-01-19 03:36:31] 2024-01-19 02:35:58,506 | WARNING  | aborting job monitor tasks since payload process 1206 is not running
[2024-01-19 03:36:31] 2024-01-19 02:35:58,560 | INFO     | transferring file 1378c30a-b618-4307-9ee0-ced58f2910cc_77339.1.job.log.tgz from /var/lib/boinc/slots/0/PanDA_Pilot-6081893718/1378c30a-b618-4307-9ee0-ced58f2910cc_
[2024-01-19 03:36:31] 2024-01-19 02:35:58,561 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc/slots/0/PanDA_Pilot-6081893718/1378c30a-b618-4307-9ee0-ced58f2910cc_77339.1.job.log.tgz /var/lib/boinc/slots/0/13
[2024-01-19 03:36:31] 2024-01-19 02:35:58,644 | INFO     | Adding to output.list: 1378c30a-b618-4307-9ee0-ced58f2910cc_77339.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/e0/bf/1378c30a-b618-
[2024-01-19 03:36:31] 2024-01-19 02:35:58,647 | INFO     | summary of transferred files:
[2024-01-19 03:36:31] 2024-01-19 02:35:58,648 | INFO     |  -- lfn=1378c30a-b618-4307-9ee0-ced58f2910cc_77339.1.job.log.tgz, status_code=0, status=transferred
[2024-01-19 03:36:31] 2024-01-19 02:35:58,649 | INFO     | stage-out finished correctly
[2024-01-19 03:36:31] 2024-01-19 02:35:59,341 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-01-19 03:36:31] 2024-01-19 02:36:01,033 | INFO     | monitor loop #79: job 0:6081893718 is in state 'finished'
[2024-01-19 03:36:31] 2024-01-19 02:36:01,036 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-19 03:36:31] 2024-01-19 02:36:01,737 | INFO     | job 6081893718 has state=finished
[2024-01-19 03:36:31] 2024-01-19 02:36:01,738 | INFO     | preparing for final server update for job 6081893718 in state='finished'
[2024-01-19 03:36:31] 2024-01-19 02:36:01,739 | INFO     | this job has now completed (state=finished)
[2024-01-19 03:36:31] 2024-01-19 02:36:01,739 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-01-19 03:36:31] 2024-01-19 02:36:01,739 | INFO     | job 6081893718 has finished - writing final server update
[2024-01-19 03:36:31] 2024-01-19 02:36:01,740 | INFO     | payload/TRF did not report the number of read events
[2024-01-19 03:36:31] 2024-01-19 02:36:01,749 | INFO     | executing command: lscpu
[2024-01-19 03:36:31] 2024-01-19 02:36:01,800 | INFO     | found 2 cores (2 cores per socket, 1 sockets)
[2024-01-19 03:36:31] 2024-01-19 02:36:01,802 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-01-19 03:36:31] 2024-01-19 02:36:01,863 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-01-19 03:36:31] 2024-01-19 02:36:03,542 | INFO     | monitor loop #80: job 0:6081893718 is in state 'finished'
[2024-01-19 03:36:31] 2024-01-19 02:36:03,542 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-19 03:36:31] 2024-01-19 02:36:06,051 | INFO     | monitor loop #81: job 0:6081893718 is in state 'finished'
[2024-01-19 03:36:31] 2024-01-19 02:36:06,051 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-19 03:36:31] 2024-01-19 02:36:08,573 | INFO     | monitor loop #82: job 0:6081893718 is in state 'finished'
[2024-01-19 03:36:31] 2024-01-19 02:36:08,576 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-19 03:36:31] 2024-01-19 02:36:11,094 | INFO     | monitor loop #83: job 0:6081893718 is in state 'finished'
[2024-01-19 03:36:31] 2024-01-19 02:36:11,094 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-19 03:36:31] 2024-01-19 02:36:11,153 | INFO     | CPU arch script returned: x86-64-v2
[2024-01-19 03:36:31] 2024-01-19 02:36:11,155 | INFO     | using path: /var/lib/boinc/slots/0/PanDA_Pilot-6081893718/memory_monitor_summary.json (trf name=prmon)
[2024-01-19 03:36:31] 2024-01-19 02:36:11,158 | INFO     | extracted standard info from prmon json
[2024-01-19 03:36:31] 2024-01-19 02:36:11,158 | INFO     | extracted standard memory fields from prmon json
[2024-01-19 03:36:31] 2024-01-19 02:36:11,159 | WARNING  | failed to calculate 4530176/0: division by zero
[2024-01-19 03:36:31] 2024-01-19 02:36:11,162 | WARNING  | wrong length of table data, x=[1705631553.0], y=[12043.0] (must be same and length>=4)
[2024-01-19 03:36:31] 2024-01-19 02:36:11,163 | INFO     | ..............................
[2024-01-19 03:36:31] 2024-01-19 02:36:11,163 | INFO     | . Timing measurements:
[2024-01-19 03:36:31] 2024-01-19 02:36:11,163 | INFO     | . get job = 53 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,163 | INFO     | . initial setup = 55 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,163 | INFO     | . payload setup = 0 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,163 | INFO     | . stage-in = 0 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,164 | INFO     | . payload execution = 31 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,164 | INFO     | . stage-out = 180 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,164 | INFO     | . log creation = 0 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,164 | INFO     | ..............................
[2024-01-19 03:36:31] 2024-01-19 02:36:11,378 | INFO     | 
[2024-01-19 03:36:31] 2024-01-19 02:36:11,379 | INFO     | job summary report
[2024-01-19 03:36:31] 2024-01-19 02:36:11,379 | INFO     | --------------------------------------------------
[2024-01-19 03:36:31] 2024-01-19 02:36:11,380 | INFO     | PanDA job id: 6081893718
[2024-01-19 03:36:31] 2024-01-19 02:36:11,380 | INFO     | task id: 2
[2024-01-19 03:36:31] 2024-01-19 02:36:11,381 | INFO     | errors: (none)
[2024-01-19 03:36:31] 2024-01-19 02:36:11,381 | INFO     | status: LOG_TRANSFER = DONE 
[2024-01-19 03:36:31] 2024-01-19 02:36:11,382 | INFO     | pilot state: finished 
[2024-01-19 03:36:31] 2024-01-19 02:36:11,383 | INFO     | transexitcode: 0
[2024-01-19 03:36:31] 2024-01-19 02:36:11,384 | INFO     | exeerrorcode: 0
[2024-01-19 03:36:31] 2024-01-19 02:36:11,385 | INFO     | exeerrordiag: 
[2024-01-19 03:36:31] 2024-01-19 02:36:11,385 | INFO     | exitcode: 0
[2024-01-19 03:36:31] 2024-01-19 02:36:11,386 | INFO     | exitmsg: 
[2024-01-19 03:36:31] 2024-01-19 02:36:11,386 | INFO     | cpuconsumptiontime: 8 s
[2024-01-19 03:36:31] 2024-01-19 02:36:11,386 | INFO     | nevents: 0
[2024-01-19 03:36:31] 2024-01-19 02:36:11,387 | INFO     | neventsw: 0
[2024-01-19 03:36:31] 2024-01-19 02:36:11,387 | INFO     | pid: 1206
[2024-01-19 03:36:31] 2024-01-19 02:36:11,387 | INFO     | pgrp: 1206
[2024-01-19 03:36:31] 2024-01-19 02:36:11,388 | INFO     | corecount: 1
[2024-01-19 03:36:31] 2024-01-19 02:36:11,388 | INFO     | event service: False
[2024-01-19 03:36:31] 2024-01-19 02:36:11,390 | INFO     | sizes: {0: 2393113, 1: 2393742, 2: 2393770, 36: 2398209, 218: 2400666, 219: 2400694, 231: 2400794}
[2024-01-19 03:36:31] 2024-01-19 02:36:11,391 | INFO     | --------------------------------------------------
[2024-01-19 03:36:31] 2024-01-19 02:36:11,391 | INFO     | 
[2024-01-19 03:36:31] 2024-01-19 02:36:11,392 | INFO     | executing command: ls -lF /var/lib/boinc/slots/0
[2024-01-19 03:36:31] 2024-01-19 02:36:11,441 | INFO     | queue jobs had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,442 | INFO     | queue payloads had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,445 | INFO     | queue data_in had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,446 | INFO     | queue data_out had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,446 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,446 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,447 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,447 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,447 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,447 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,447 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,448 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,448 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,448 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,448 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,449 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,449 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,449 | INFO     | queue completed_jobids has 1 job(s)
[2024-01-19 03:36:31] 2024-01-19 02:36:11,450 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,450 | INFO     | queue messages had 0 job(s) [purged]
[2024-01-19 03:36:31] 2024-01-19 02:36:11,450 | INFO     | job 6081893718 has completed (purged errors)
[2024-01-19 03:36:31] 2024-01-19 02:36:11,451 | INFO     | overall cleanup function is called
[2024-01-19 03:36:31] 2024-01-19 02:36:12,461 | INFO     | --- collectZombieJob: --- 10, [1206]
[2024-01-19 03:36:31] 2024-01-19 02:36:12,462 | INFO     | zombie collector waiting for pid 1206
[2024-01-19 03:36:31] 2024-01-19 02:36:12,462 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-01-19 03:36:31] 2024-01-19 02:36:13,484 | INFO     | collected zombie processes
[2024-01-19 03:36:31] 2024-01-19 02:36:13,484 | INFO     | will now attempt to kill all subprocesses of pid=1206
[2024-01-19 03:36:31] 2024-01-19 02:36:13,590 | INFO     | process IDs to be killed: [1206] (in reverse order)
[2024-01-19 03:36:31] 2024-01-19 02:36:13,662 | WARNING  | found no corresponding commands to process id(s)
[2024-01-19 03:36:31] 2024-01-19 02:36:13,663 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-01-19 03:36:31] 2024-01-19 02:36:13,666 | INFO     | did not find any defunct processes belonging to 1206
[2024-01-19 03:36:31] 2024-01-19 02:36:13,669 | INFO     | did not find any defunct processes belonging to 1206
[2024-01-19 03:36:31] 2024-01-19 02:36:13,670 | INFO     | ready for new job
[2024-01-19 03:36:31] 2024-01-19 02:36:13,670 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-01-19 03:36:31] 2024-01-19 02:36:13,671 | INFO     | **************************************
[2024-01-19 03:36:31] 2024-01-19 02:36:13,671 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-01-19 03:36:31] 2024-01-19 02:36:13,671 | INFO     | **************************************
[2024-01-19 03:36:31] 2024-01-19 02:36:13,671 | INFO     | 
[2024-01-19 03:36:31] 2024-01-19 02:36:13,672 | INFO     | pilot is running in a VM
[2024-01-19 03:36:31] 2024-01-19 02:36:13,672 | INFO     | architecture information:
[2024-01-19 03:36:31] 2024-01-19 02:36:13,672 | INFO     | executing command: cat /etc/os-release
[2024-01-19 03:36:31] 2024-01-19 02:36:13,703 | INFO     | cat /etc/os-release:
[2024-01-19 03:36:31] NAME="CentOS Linux"
[2024-01-19 03:36:31] VERSION="7 (Core)"
[2024-01-19 03:36:31] ID="centos"
[2024-01-19 03:36:31] ID_LIKE="rhel fedora"
[2024-01-19 03:36:31] VERSION_ID="7"
[2024-01-19 03:36:31] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-01-19 03:36:31] ANSI_COLOR="0;31"
[2024-01-19 03:36:31] CPE_NAME="cpe:/o:centos:centos:7"
[2024-01-19 03:36:31] HOME_URL="https://www.centos.org/"
[2024-01-19 03:36:31] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-01-19 03:36:31] 
[2024-01-19 03:36:31] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-01-19 03:36:31] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-01-19 03:36:31] REDHAT_SUPPORT_PRODUCT="centos"
[2024-01-19 03:36:31] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-01-19 03:36:31] 
[2024-01-19 03:36:31] 2024-01-19 02:36:13,703 | INFO     | **************************************
[2024-01-19 03:36:31] 2024-01-19 02:36:14,213 | INFO     | executing command: df -mP /var/lib/boinc/slots/0
[2024-01-19 03:36:31] 2024-01-19 02:36:14,274 | INFO     | sufficient remaining disk space (10919870464 B)
[2024-01-19 03:36:31] 2024-01-19 02:36:14,275 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-01-19 03:36:31] 2024-01-19 02:36:14,276 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-01-19 03:36:31] 2024-01-19 02:36:14,276 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-01-19 03:36:31] 2024-01-19 02:36:14,279 | INFO     | found 0 job(s) in 20 queues
[2024-01-19 03:36:31] 2024-01-19 02:36:14,280 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-01-19 03:36:31] 2024-01-19 02:36:14,282 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-01-19 03:36:31] 2024-01-19 02:36:14,494 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-01-19 03:36:31] 2024-01-19 02:36:14,615 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-01-19 03:36:31] 2024-01-19 02:36:14,625 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-01-19 03:36:31] 2024-01-19 02:36:14,626 | INFO     | aborting loop
[2024-01-19 03:36:31] 2024-01-19 02:36:15,290 | INFO     | [job] retrieve thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:15,325 | INFO     | [data] control thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:15,559 | INFO     | [payload] validate_post thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:15,632 | INFO     | [job] job monitor thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:15,917 | INFO     | [payload] execute_payloads thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:15,934 | INFO     | [payload] validate_pre thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:15,961 | INFO     | [job] control thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:16,130 | INFO     | [payload] failed_post thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:16,245 | INFO     | [job] validate thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:16,415 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-01-19 03:36:31] 2024-01-19 02:36:16,524 | INFO     | [data] copytool_out thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:16,628 | INFO     | [data] copytool_in thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:16,634 | INFO     | [job] create_data_payload thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:16,686 | INFO     | [payload] control thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:17,427 | INFO     | [job] queue monitor thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:18,648 | INFO     | [data] queue_monitor thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:24,595 | INFO     | job.realtimelogging is not enabled
[2024-01-19 03:36:31] 2024-01-19 02:36:25,596 | INFO     | [payload] run_realtimelog thread has finished
[2024-01-19 03:36:31] 2024-01-19 02:36:25,757 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140057321330496)>', '<ExcThread(monitor, started 140056576640768)>']
[2024-01-19 03:36:31] 2024-01-19 02:36:26,405 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-01-19 03:36:31] 2024-01-19 02:36:26,405 | INFO     | [monitor] control thread has ended
[2024-01-19 03:36:31] 2024-01-19 02:36:30,784 | INFO     | end of generic workflow (traces error code: 0)
[2024-01-19 03:36:31] 2024-01-19 02:36:30,785 | INFO     | traces error code: 0
[2024-01-19 03:36:31] 2024-01-19 02:36:30,785 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-01-19 03:36:31] 2024-01-19 02:36:30,983 [wrapper] ==== pilot stdout END ====
[2024-01-19 03:36:31] 2024-01-19 02:36:30,990 [wrapper] ==== wrapper stdout RESUME ====
[2024-01-19 03:36:31] 2024-01-19 02:36:30,996 [wrapper] pilotpid: 31583
[2024-01-19 03:36:31] 2024-01-19 02:36:31,016 [wrapper] Pilot exit status: 0
[2024-01-19 03:36:31] 2024-01-19 02:36:31,044 [wrapper] pandaids: 6081893718
[2024-01-19 03:36:31] 2024-01-19 02:36:31,069 [wrapper] apfmon messages muted
[2024-01-19 03:36:31] 2024-01-19 02:36:31,072 [wrapper] Test setup, not cleaning
[2024-01-19 03:36:31] 2024-01-19 02:36:31,077 [wrapper] ==== wrapper stdout END ====
[2024-01-19 03:36:31] 2024-01-19 02:36:31,083 [wrapper] ==== wrapper stderr END ====
[2024-01-19 03:36:31] 2024-01-19 02:36:31,115 [wrapper] wrapperexiting ec=0, duration=399
[2024-01-19 03:36:31] 2024-01-19 02:36:31,123 [wrapper] apfmon messages muted
[2024-01-19 03:36:31]  *** Error codes and diagnostics ***
[2024-01-19 03:36:31]     "exeErrorCode": 0,
[2024-01-19 03:36:31]     "exeErrorDiag": "",
[2024-01-19 03:36:31]     "pilotErrorCode": 0,
[2024-01-19 03:36:31]     "pilotErrorDiag": "",
[2024-01-19 03:36:31]  *** Listing of results directory ***
[2024-01-19 03:36:31] insgesamt 3464
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc  441289 19. Jan 00:27 pilot3.tar.gz
[2024-01-19 03:36:31] -rwx------. 1 boinc boinc   29422 19. Jan 01:02 runpilot2-wrapper.sh
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc    4388 19. Jan 01:02 queuedata.json
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc     107 19. Jan 03:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc    6046 19. Jan 03:29 init_data.xml
[2024-01-19 03:36:31] -rw-r--r--. 2 boinc boinc   17552 19. Jan 03:29 start_atlas.sh
[2024-01-19 03:36:31] drwxrwx--x. 2 boinc boinc      48 19. Jan 03:29 shared
[2024-01-19 03:36:31] -rwxr-xr-x. 1 boinc boinc    7986 19. Jan 03:29 run_atlas
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc     112 19. Jan 03:29 job.xml
[2024-01-19 03:36:31] -rw-r--r--. 2 boinc boinc  452809 19. Jan 03:29 input.tar.gz
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc       0 19. Jan 03:29 boinc_lockfile
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc    1583 19. Jan 03:29 pandaJob.out
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc     424 19. Jan 03:29 setup.sh.local
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc  948276 19. Jan 03:30 agis_schedconf.cvmfs.json
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc 1338654 19. Jan 03:31 cric_ddmendpoints.json
[2024-01-19 03:36:31] drwx------. 4 boinc boinc    4096 19. Jan 03:32 pilot3
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc     987 19. Jan 03:32 memory_monitor_summary.json
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc   10638 19. Jan 03:32 1378c30a-b618-4307-9ee0-ced58f2910cc_77339.1.job.log.tgz
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc    8192 19. Jan 03:36 boinc_mmap_file
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc      22 19. Jan 03:36 wrapper_checkpoint.txt
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc     526 19. Jan 03:36 boinc_task_state.xml
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc    1552 19. Jan 03:36 heartbeat.json
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc    4158 19. Jan 03:36 pilotlog.txt
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc   72923 19. Jan 03:36 1378c30a-b618-4307-9ee0-ced58f2910cc_77339.1.job.log
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc     227 19. Jan 03:36 output.list
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc     686 19. Jan 03:36 runtime_log
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc   92160 19. Jan 03:36 result.tar.gz
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc   11194 19. Jan 03:36 runtime_log.err
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc     621 19. Jan 03:36 clpNDm0Vrk4n7Olcko1bjSoqABFKDmABFKDmyeZQDmhfJKDmGb7CGn.diag
[2024-01-19 03:36:31] -rw-r--r--. 1 boinc boinc   23116 19. Jan 03:36 stderr.txt
[2024-01-19 03:36:31] No HITS result produced
[2024-01-19 03:36:31]  *** Contents of shared directory: ***
[2024-01-19 03:36:31] insgesamt 556
[2024-01-19 03:36:31] -rw-r--r--. 2 boinc boinc  17552 19. Jan 03:29 start_atlas.sh
[2024-01-19 03:36:31] -rw-r--r--. 2 boinc boinc 452809 19. Jan 03:29 input.tar.gz
[2024-01-19 03:36:31] -rw-------. 1 boinc boinc  92160 19. Jan 03:36 result.tar.gz
03:36:33 (27376): run_atlas exited; CPU time 22.638218
03:36:33 (27376): called boinc_finish(0)

</stderr_txt>
]]>

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