Stderr output

<core_client_version>7.18.1</core_client_version>
<![CDATA[
<stderr_txt>
04:27:57 (453873): wrapper (7.7.26015): starting
04:27:57 (453873): wrapper: running run_atlas (--nthreads 4)
[2024-01-31 04:27:57] Arguments: --nthreads 4
[2024-01-31 04:27:57] Threads: 4
[2024-01-31 04:27:57] Checking for CVMFS
[2024-01-31 04:27:57] Probing /cvmfs/atlas.cern.ch... OK
[2024-01-31 04:27:59] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-01-31 04:27:59] Running cvmfs_config stat atlas.cern.ch
[2024-01-31 04:27:59] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-01-31 04:27:59] 2.11.1.0 81175 16190 77852 128823 1 8 4041265 4194304 336 130560 1 7993767 99.059 9492104 1393 http://s1fnal-cvmfs.openhtc.io:8080/cvmfs/atlas.cern.ch DIRECT 1
[2024-01-31 04:27:59] CVMFS is ok
[2024-01-31 04:27:59] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-01-31 04:27:59] Small home clusters do not require a local http proxy but it is suggested if
[2024-01-31 04:27:59] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-01-31 04:27:59] Further information can be found at the LHC@home message board.
[2024-01-31 04:27:59] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-01-31 04:27:59] Checking for apptainer binary...
[2024-01-31 04:27:59] apptainer is not installed, using version from CVMFS
[2024-01-31 04:27:59] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-01-31 04:27:59] 3070Ti
[2024-01-31 04:27:59] apptainer works
[2024-01-31 04:27:59] Set ATHENA_PROC_NUMBER=4
[2024-01-31 04:27:59] Set ATHENA_CORE_NUMBER=4
[2024-01-31 04:27:59] Starting ATLAS job with PandaID=6092678592
[2024-01-31 04:27:59] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/6 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-01-31 04:50:41]  *** The last 200 lines of the pilot log: ***
[2024-01-31 04:50:41] 2024-01-31 09:49:37,227 | INFO     | monitor loop #202: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:37,228 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:39,729 | INFO     | monitor loop #203: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:39,730 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:42,232 | INFO     | monitor loop #204: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:42,233 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:44,733 | INFO     | monitor loop #205: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:44,734 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:47,236 | INFO     | monitor loop #206: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:47,237 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:49,737 | INFO     | monitor loop #207: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:49,738 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:52,240 | INFO     | monitor loop #208: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:52,241 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:52,377 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-01-31 04:50:41] 2024-01-31 09:49:52,993 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-01-31 04:50:41] 2024-01-31 09:49:52,993 | INFO     | will try again after 22s..
[2024-01-31 04:50:41] 2024-01-31 09:49:54,741 | INFO     | monitor loop #209: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:54,742 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:57,244 | INFO     | monitor loop #210: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:57,245 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:49:59,748 | INFO     | monitor loop #211: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:49:59,748 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:50:02,249 | INFO     | monitor loop #212: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:50:02,250 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:50:04,752 | INFO     | monitor loop #213: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:50:04,753 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:50:07,253 | INFO     | monitor loop #214: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:50:07,254 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:50:09,757 | INFO     | monitor loop #215: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:50:09,757 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:50:12,257 | INFO     | monitor loop #216: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:50:12,258 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:50:14,761 | INFO     | monitor loop #217: job 0:6092678592 is in state 'stageout'
[2024-01-31 04:50:41] 2024-01-31 09:50:14,761 | WARNING  | aborting job monitor tasks since payload process 471192 is not running
[2024-01-31 04:50:41] 2024-01-31 09:50:15,089 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-01-31 04:50:41] 2024-01-31 09:50:15,358 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-01-31 04:50:41] 2024-01-31 09:50:15,359 | WARNING  | cache file=/var/lib/boinc-client/slots/6/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/6/agis
[2024-01-31 04:50:41] 2024-01-31 09:50:15,391 | INFO     | transferring file 2c4d3471-a9e6-47f2-8543-1d55e2a94930_83097.job.log.tgz from /var/lib/boinc-client/slots/6/PanDA_Pilot-6092678592/2c4d3471-a9e6-47f2-8543-1d55e2a9
[2024-01-31 04:50:41] 2024-01-31 09:50:15,391 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/6/PanDA_Pilot-6092678592/2c4d3471-a9e6-47f2-8543-1d55e2a94930_83097.job.log.tgz /var/lib/boinc-clien
[2024-01-31 04:50:41] 2024-01-31 09:50:15,407 | INFO     | Adding to output.list: 2c4d3471-a9e6-47f2-8543-1d55e2a94930_83097.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/50/cb/2c4d3471-a9e6-47
[2024-01-31 04:50:41] 2024-01-31 09:50:15,408 | INFO     | summary of transferred files:
[2024-01-31 04:50:41] 2024-01-31 09:50:15,408 | INFO     |  -- lfn=2c4d3471-a9e6-47f2-8543-1d55e2a94930_83097.job.log.tgz, status_code=0, status=transferred
[2024-01-31 04:50:41] 2024-01-31 09:50:15,408 | INFO     | stage-out finished correctly
[2024-01-31 04:50:41] 2024-01-31 09:50:15,457 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-01-31 04:50:41] 2024-01-31 09:50:15,590 | INFO     | job 6092678592 has state=finished
[2024-01-31 04:50:41] 2024-01-31 09:50:15,590 | INFO     | preparing for final server update for job 6092678592 in state='finished'
[2024-01-31 04:50:41] 2024-01-31 09:50:15,590 | INFO     | this job has now completed (state=finished)
[2024-01-31 04:50:41] 2024-01-31 09:50:15,590 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-01-31 04:50:41] 2024-01-31 09:50:15,590 | INFO     | job 6092678592 has finished - writing final server update
[2024-01-31 04:50:41] 2024-01-31 09:50:15,590 | INFO     | total number of processed events: 2 (read)
[2024-01-31 04:50:41] 2024-01-31 09:50:15,594 | INFO     | executing command: lscpu
[2024-01-31 04:50:41] 2024-01-31 09:50:15,621 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-01-31 04:50:41] 2024-01-31 09:50:15,621 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-01-31 04:50:41] 2024-01-31 09:50:15,646 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-01-31 04:50:41] 2024-01-31 09:50:17,261 | INFO     | monitor loop #218: job 0:6092678592 is in state 'finished'
[2024-01-31 04:50:41] 2024-01-31 09:50:17,262 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-01-31 04:50:41] 2024-01-31 09:50:18,159 | INFO     | CPU arch script returned: x86-64-v3
[2024-01-31 04:50:41] 2024-01-31 09:50:18,159 | INFO     | using path: /var/lib/boinc-client/slots/6/PanDA_Pilot-6092678592/memory_monitor_summary.json (trf name=prmon)
[2024-01-31 04:50:41] 2024-01-31 09:50:18,160 | INFO     | extracted standard info from prmon json
[2024-01-31 04:50:41] 2024-01-31 09:50:18,160 | INFO     | extracted standard memory fields from prmon json
[2024-01-31 04:50:41] 2024-01-31 09:50:18,160 | WARNING  | wrong length of table data, x=[1706693784.0, 1706693845.0, 1706693906.0, 1706693967.0, 1706694028.0, 1706694089.0], y=[872405.0, 961165.0, 1085203.0, 1568109.0, 15
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | ..............................
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . Timing measurements:
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . get job = 68 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . initial setup = 47 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . payload setup = 6 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . stage-in = 52 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . payload execution = 751 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . stage-out = 383 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | . log creation = 0 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,161 | INFO     | ..............................
[2024-01-31 04:50:41] 2024-01-31 09:50:18,219 | INFO     | 
[2024-01-31 04:50:41] 2024-01-31 09:50:18,219 | INFO     | job summary report
[2024-01-31 04:50:41] 2024-01-31 09:50:18,219 | INFO     | --------------------------------------------------
[2024-01-31 04:50:41] 2024-01-31 09:50:18,219 | INFO     | PanDA job id: 6092678592
[2024-01-31 04:50:41] 2024-01-31 09:50:18,219 | INFO     | task id: NULL
[2024-01-31 04:50:41] 2024-01-31 09:50:18,219 | INFO     | errors: (none)
[2024-01-31 04:50:41] 2024-01-31 09:50:18,219 | INFO     | status: LOG_TRANSFER = DONE 
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | pilot state: finished 
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | transexitcode: 0
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | exeerrorcode: 0
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | exeerrordiag: 
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | exitcode: 0
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | exitmsg: OK
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | cpuconsumptiontime: 381 s
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | nevents: 2
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | neventsw: 0
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | pid: 471192
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | pgrp: 471192
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | corecount: 4
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | event service: False
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | sizes: {0: 2398978, 1: 2399177, 11: 2399323, 22: 2399351, 33: 2399379, 43: 2399407, 54: 2399563, 56: 2399651, 64: 2399679, 761: 2419548, 762: 2419547, 1145: 242904
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | --------------------------------------------------
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | 
[2024-01-31 04:50:41] 2024-01-31 09:50:18,220 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/6
[2024-01-31 04:50:41] 2024-01-31 09:50:18,235 | INFO     | queue jobs had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue payloads had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue data_in had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue data_out had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue completed_jobids has 1 job(s)
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | queue messages had 0 job(s) [purged]
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | job 6092678592 has completed (purged errors)
[2024-01-31 04:50:41] 2024-01-31 09:50:18,236 | INFO     | overall cleanup function is called
[2024-01-31 04:50:41] 2024-01-31 09:50:19,241 | INFO     | --- collectZombieJob: --- 10, [471192]
[2024-01-31 04:50:41] 2024-01-31 09:50:19,242 | INFO     | zombie collector waiting for pid 471192
[2024-01-31 04:50:41] 2024-01-31 09:50:19,242 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-01-31 04:50:41] 2024-01-31 09:50:20,245 | INFO     | collected zombie processes
[2024-01-31 04:50:41] 2024-01-31 09:50:20,246 | INFO     | will now attempt to kill all subprocesses of pid=471192
[2024-01-31 04:50:41] 2024-01-31 09:50:20,313 | INFO     | process IDs to be killed: [471192] (in reverse order)
[2024-01-31 04:50:41] 2024-01-31 09:50:20,364 | WARNING  | found no corresponding commands to process id(s)
[2024-01-31 04:50:41] 2024-01-31 09:50:20,364 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-01-31 04:50:41] 2024-01-31 09:50:20,367 | INFO     | did not find any defunct processes belonging to 471192
[2024-01-31 04:50:41] 2024-01-31 09:50:20,370 | INFO     | did not find any defunct processes belonging to 471192
[2024-01-31 04:50:41] 2024-01-31 09:50:20,370 | INFO     | ready for new job
[2024-01-31 04:50:41] 2024-01-31 09:50:20,371 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-01-31 04:50:41] 2024-01-31 09:50:20,371 | INFO     | **************************************
[2024-01-31 04:50:41] 2024-01-31 09:50:20,371 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-01-31 04:50:41] 2024-01-31 09:50:20,372 | INFO     | **************************************
[2024-01-31 04:50:41] 2024-01-31 09:50:20,372 | INFO     | 
[2024-01-31 04:50:41] 2024-01-31 09:50:20,373 | INFO     | architecture information:
[2024-01-31 04:50:41] 2024-01-31 09:50:20,373 | INFO     | executing command: cat /etc/os-release
[2024-01-31 04:50:41] 2024-01-31 09:50:20,387 | INFO     | cat /etc/os-release:
[2024-01-31 04:50:41] NAME="CentOS Linux"
[2024-01-31 04:50:41] VERSION="7 (Core)"
[2024-01-31 04:50:41] ID="centos"
[2024-01-31 04:50:41] ID_LIKE="rhel fedora"
[2024-01-31 04:50:41] VERSION_ID="7"
[2024-01-31 04:50:41] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-01-31 04:50:41] ANSI_COLOR="0;31"
[2024-01-31 04:50:41] CPE_NAME="cpe:/o:centos:centos:7"
[2024-01-31 04:50:41] HOME_URL="https://www.centos.org/"
[2024-01-31 04:50:41] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-01-31 04:50:41] 
[2024-01-31 04:50:41] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-01-31 04:50:41] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-01-31 04:50:41] REDHAT_SUPPORT_PRODUCT="centos"
[2024-01-31 04:50:41] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-01-31 04:50:41] 
[2024-01-31 04:50:41] 2024-01-31 09:50:20,387 | INFO     | **************************************
[2024-01-31 04:50:41] 2024-01-31 09:50:20,890 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/6
[2024-01-31 04:50:41] 2024-01-31 09:50:20,904 | INFO     | sufficient remaining disk space (1815412211712 B)
[2024-01-31 04:50:41] 2024-01-31 09:50:20,904 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-01-31 04:50:41] 2024-01-31 09:50:20,905 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-01-31 04:50:41] 2024-01-31 09:50:20,905 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-01-31 04:50:41] 2024-01-31 09:50:20,905 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-01-31 04:50:41] 2024-01-31 09:50:20,905 | INFO     | aborting loop
[2024-01-31 04:50:41] 2024-01-31 09:50:20,905 | INFO     | found 0 job(s) in 20 queues
[2024-01-31 04:50:41] 2024-01-31 09:50:20,905 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-01-31 04:50:41] 2024-01-31 09:50:20,905 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-01-31 04:50:41] 2024-01-31 09:50:20,961 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-01-31 04:50:41] 2024-01-31 09:50:21,519 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-01-31 04:50:41] 2024-01-31 09:50:21,906 | INFO     | [job] retrieve thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:21,909 | INFO     | [job] job monitor thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:22,410 | INFO     | [payload] validate_post thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:22,567 | INFO     | [data] control thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:22,609 | INFO     | [data] copytool_in thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:22,733 | INFO     | [job] control thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:22,965 | INFO     | [data] copytool_out thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:22,973 | INFO     | [payload] execute_payloads thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:23,081 | INFO     | [job] validate thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:23,225 | INFO     | [payload] control thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:23,226 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-01-31 04:50:41] 2024-01-31 09:50:23,229 | INFO     | [job] create_data_payload thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:23,285 | INFO     | [payload] validate_pre thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:23,481 | INFO     | [payload] failed_post thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:24,231 | INFO     | [job] queue monitor thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:25,521 | INFO     | [data] queue_monitor thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:34,653 | INFO     | job.realtimelogging is not enabled
[2024-01-31 04:50:41] 2024-01-31 09:50:35,657 | INFO     | [payload] run_realtimelog thread has finished
[2024-01-31 04:50:41] 2024-01-31 09:50:36,513 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140024152659776)>', '<ExcThread(monitor, started 140023466792704)>']
[2024-01-31 04:50:41] 2024-01-31 09:50:36,969 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-01-31 04:50:41] 2024-01-31 09:50:36,970 | INFO     | [monitor] control thread has ended
[2024-01-31 04:50:41] 2024-01-31 09:50:41,537 | INFO     | end of generic workflow (traces error code: 0)
[2024-01-31 04:50:41] 2024-01-31 09:50:41,538 | INFO     | traces error code: 0
[2024-01-31 04:50:41] 2024-01-31 09:50:41,538 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-01-31 04:50:41] 2024-01-31 09:50:41,591 [wrapper] ==== pilot stdout END ====
[2024-01-31 04:50:41] 2024-01-31 09:50:41,593 [wrapper] ==== wrapper stdout RESUME ====
[2024-01-31 04:50:41] 2024-01-31 09:50:41,594 [wrapper] pilotpid: 461701
[2024-01-31 04:50:41] 2024-01-31 09:50:41,596 [wrapper] Pilot exit status: 0
[2024-01-31 04:50:41] 2024-01-31 09:50:41,602 [wrapper] pandaids: 6092678592
[2024-01-31 04:50:41] 2024-01-31 09:50:41,628 [wrapper] Sending SIGTERM to  491166 461702
[2024-01-31 04:50:41] 2024-01-31 09:50:41,630 [wrapper] Test setup, not cleaning
[2024-01-31 04:50:41] 2024-01-31 09:50:41,632 [wrapper] ==== wrapper stdout END ====
[2024-01-31 04:50:41] 2024-01-31 09:50:41,633 [wrapper] ==== wrapper stderr END ====
[2024-01-31 04:50:41] 2024-01-31 09:50:41,637 [wrapper] apfmon messages muted
[2024-01-31 04:50:41]  *** Error codes and diagnostics ***
[2024-01-31 04:50:41]     "exeErrorCode": 0,
[2024-01-31 04:50:41]     "exeErrorDiag": "",
[2024-01-31 04:50:41]     "pilotErrorCode": 0,
[2024-01-31 04:50:41]     "pilotErrorDiag": "",
[2024-01-31 04:50:41]  *** Listing of results directory ***
[2024-01-31 04:50:41] total 42736
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc   441289 Jan 31 00:15 pilot3.tar.gz
[2024-01-31 04:50:41] -rwx------ 1 boinc boinc    31066 Jan 31 00:37 runpilot2-wrapper.sh
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc     4388 Jan 31 00:37 queuedata.json
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc      107 Jan 31 04:27 wrapper_26015_x86_64-pc-linux-gnu
[2024-01-31 04:50:41] -rwxr-xr-x 1 boinc boinc     7986 Jan 31 04:27 run_atlas
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc      112 Jan 31 04:27 job.xml
[2024-01-31 04:50:41] -rw-r--r-- 2 boinc boinc    17610 Jan 31 04:27 start_atlas.sh
[2024-01-31 04:50:41] drwxrwx--x 2 boinc boinc     4096 Jan 31 04:27 shared
[2024-01-31 04:50:41] -rw-r--r-- 2 boinc boinc   453792 Jan 31 04:27 input.tar.gz
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc     9503 Jan 31 04:27 init_data.xml
[2024-01-31 04:50:41] -rw-r--r-- 2 boinc boinc 38184411 Jan 31 04:27 EVNT.04972714._000028.pool.root.1
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc        0 Jan 31 04:27 boinc_lockfile
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc     2797 Jan 31 04:27 pandaJob.out
[2024-01-31 04:50:41] -rw------- 1 boinc boinc      424 Jan 31 04:27 setup.sh.local
[2024-01-31 04:50:41] -rw------- 1 boinc boinc   959519 Jan 31 04:28 agis_schedconf.cvmfs.json
[2024-01-31 04:50:41] -rw------- 1 boinc boinc  1338313 Jan 31 04:28 cric_ddmendpoints.json
[2024-01-31 04:50:41] drwx------ 4 boinc boinc     4096 Jan 31 04:30 pilot3
[2024-01-31 04:50:41] -rw------- 1 boinc boinc  1495994 Jan 31 04:43 Hits.hc_20285302.BOINC-TEST.2c4d3471-a9e6-47f2-8543-1d55e2a94930_83097.HITS.pool.root
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc      532 Jan 31 04:43 boinc_task_state.xml
[2024-01-31 04:50:41] -rw------- 1 boinc boinc     1001 Jan 31 04:43 memory_monitor_summary.json
[2024-01-31 04:50:41] -rw------- 1 boinc boinc   153672 Jan 31 04:46 2c4d3471-a9e6-47f2-8543-1d55e2a94930_83097.job.log.tgz
[2024-01-31 04:50:41] -rw------- 1 boinc boinc     6700 Jan 31 04:50 heartbeat.json
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc     8192 Jan 31 04:50 boinc_mmap_file
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc       25 Jan 31 04:50 wrapper_checkpoint.txt
[2024-01-31 04:50:41] -rw------- 1 boinc boinc     4105 Jan 31 04:50 pilotlog.txt
[2024-01-31 04:50:41] -rw------- 1 boinc boinc   171120 Jan 31 04:50 2c4d3471-a9e6-47f2-8543-1d55e2a94930_83097.job.log
[2024-01-31 04:50:41] -rw------- 1 boinc boinc      510 Jan 31 04:50 output.list
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc      680 Jan 31 04:50 runtime_log
[2024-01-31 04:50:41] -rw------- 1 boinc boinc   348160 Jan 31 04:50 result.tar.gz
[2024-01-31 04:50:41] -rw------- 1 boinc boinc      622 Jan 31 04:50 XsHKDmnSIp4n7Olcko1bjSoqABFKDmABFKDmyeZQDmbKKKDmcqTFzm.diag
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc    11756 Jan 31 04:50 runtime_log.err
[2024-01-31 04:50:41] -rw-r--r-- 1 boinc boinc    23456 Jan 31 04:50 stderr.txt
[2024-01-31 04:50:41] HITS file was successfully produced:
[2024-01-31 04:50:41] -rw------- 1 boinc boinc 1495994 Jan 31 04:43 shared/HITS.pool.root.1
[2024-01-31 04:50:41]  *** Contents of shared directory: ***
[2024-01-31 04:50:41] total 39564
[2024-01-31 04:50:41] -rw-r--r-- 2 boinc boinc    17610 Jan 31 04:27 start_atlas.sh
[2024-01-31 04:50:41] -rw-r--r-- 2 boinc boinc   453792 Jan 31 04:27 input.tar.gz
[2024-01-31 04:50:41] -rw-r--r-- 2 boinc boinc 38184411 Jan 31 04:27 ATLAS.root_0
[2024-01-31 04:50:41] -rw------- 1 boinc boinc  1495994 Jan 31 04:43 HITS.pool.root.1
[2024-01-31 04:50:41] -rw------- 1 boinc boinc   348160 Jan 31 04:50 result.tar.gz
04:50:43 (453873): run_atlas exited; CPU time 374.907737
04:50:43 (453873): called boinc_finish(0)

</stderr_txt>
]]>

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