| Name | P2tMDmhiBs4n7Olcko1bjSoqABFKDmABFKDmyeZQDm7aKKDmtgzhRn_0 |
| Workunit | 2387878 |
| Created | 8 Feb 2024, 5:01:39 UTC |
| Sent | 8 Feb 2024, 5:01:57 UTC |
| Report deadline | 15 Feb 2024, 5:01:57 UTC |
| Received | 8 Feb 2024, 5:10:11 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 5025 |
| Run time | 7 min 52 sec |
| CPU time | 3 min 2 sec |
| Validate state | Valid |
| Credit | 27.29 |
| Device peak FLOPS | 41.79 GFLOPS |
| Application version | ATLAS Simulation v3.01 (native_mt) x86_64-pc-linux-gnu |
| Peak working set size | 1.56 GB |
| Peak swap size | 16.08 GB |
| Peak disk usage | 79.52 MB |
Stderr output
<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
00:02:05 (354403): wrapper (7.7.26015): starting
00:02:05 (354403): wrapper: running run_atlas (--nthreads 5)
[2024-02-08 00:02:05] Arguments: --nthreads 5
[2024-02-08 00:02:05] Threads: 5
[2024-02-08 00:02:05] Checking for CVMFS
[2024-02-08 00:02:05] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-08 00:02:05] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-08 00:02:05] Running cvmfs_config stat atlas.cern.ch
[2024-02-08 00:02:05] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-08 00:02:05] 2.11.2.0 206582 59 47864 129131 0 86 2718102 4096000 671 130560 0 415450 99.976 35697 2683 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-08 00:02:05] CVMFS is ok
[2024-02-08 00:02:05] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-08 00:02:05] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-08 00:02:05] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-08 00:02:05] Further information can be found at the LHC@home message board.
[2024-02-08 00:02:05] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-08 00:02:05] Checking for apptainer binary...
[2024-02-08 00:02:05] apptainer is not installed, using version from CVMFS
[2024-02-08 00:02:05] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-08 00:02:05] x32-kubuntu
[2024-02-08 00:02:05] apptainer works
[2024-02-08 00:02:05] Set ATHENA_PROC_NUMBER=5
[2024-02-08 00:02:05] Set ATHENA_CORE_NUMBER=5
[2024-02-08 00:02:05] Starting ATLAS job with PandaID=6102029178
[2024-02-08 00:02:05] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/3 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-08 00:09:55] *** The last 200 lines of the pilot log: ***
[2024-02-08 00:09:55] 2024-02-08 05:09:34,500 | DEBUG | pilot.control.job | queue_monitor | job.completed=False
[2024-02-08 00:09:55] 2024-02-08 05:09:34,872 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 60 s
[2024-02-08 00:09:55] 2024-02-08 05:09:34,904 | WARNING | pilot.util.monitoring | job_monitor_tasks | process 365376 is no longer using CPU - aborting
[2024-02-08 00:09:55] 2024-02-08 05:09:34,904 | DEBUG | pilot.control.job | job_monitor | job_monitor_tasks returned 0,
[2024-02-08 00:09:55] 2024-02-08 05:09:34,904 | INFO | pilot.control.job | job_monitor | aborting job monitoring since job object (job id=6102029178) has expired
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report |
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | job summary report
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | PanDA job id: 6102029178
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | task id: NULL
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | errors: (none)
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | status: LOG_TRANSFER = DONE
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | pilot state: finished
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | transexitcode: 0
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | exeerrorcode: 0
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | exeerrordiag:
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | exitcode: 0
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | exitmsg: OK
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | cpuconsumptiontime: 184 s
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | nevents: 2
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | neventsw: 0
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | pid: 365376
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | pgrp: 365376
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | corecount: 5
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | event service: False
[2024-02-08 00:09:55] 2024-02-08 05:09:34,989 | INFO | pilot.control.job | make_job_report | sizes: {0: 2407035, 1: 2407234, 2: 2407440, 11: 2407468, 426: 2427006, 427: 2436249, 432: 2436415}
[2024-02-08 00:09:55] 2024-02-08 05:09:34,990 | INFO | pilot.control.job | make_job_report | --------------------------------------------------
[2024-02-08 00:09:55] 2024-02-08 05:09:34,990 | INFO | pilot.control.job | make_job_report |
[2024-02-08 00:09:55] 2024-02-08 05:09:34,990 | DEBUG | pilot.control.job | has_job_completed | ls -lF /var/lib/boinc-client/slots/3:
[2024-02-08 00:09:55]
[2024-02-08 00:09:55] 2024-02-08 05:09:34,990 | INFO | pilot.util.container | print_executable | executing command: ls -lF /var/lib/boinc-client/slots/3
[2024-02-08 00:09:55] 2024-02-08 05:09:34,994 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | DEBUG | pilot.control.job | has_job_completed | total 41944
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 272355 Feb 8 00:09 6df28b5c-1ca3-4bfc-8080-6bdd809bf0a2_2608.1.job.log
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 159479 Feb 8 00:09 6df28b5c-1ca3-4bfc-8080-6bdd809bf0a2_2608.1.job.log.tgz
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 0 Feb 8 00:02 agis_ddmendpoints.agis.ALL.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 960241 Feb 8 00:02 agis_schedconf.cvmfs.json
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 0 Feb 8 00:02 boinc_lockfile
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 8192 Feb 8 00:09 boinc_mmap_file
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 533 Feb 8 00:09 boinc_task_state.xml
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1342081 Feb 8 00:02 cric_ddmendpoints.json
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 37224345 Feb 8 00:02 EVNT.04972714._000026.pool.root.1
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 6593 Feb 8 00:09 heartbeat.json
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 9517 Feb 8 00:02 init_data.xml
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 501761 Feb 8 00:02 input.tar.gz
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 112 Feb 8 00:02 job.xml
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1001 Feb 8 00:09 memory_monitor_summary.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1574037 Feb 8 00:09 output.1.6df28b5c-1ca3-4bfc-8080-6bdd809bf0a2_2608.pool.root
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 460 Feb 8 00:09 output.list
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 134 Feb 8 00:02 P2tMDmhiBs4n7Olcko1bjSoqABFKDmABFKDmyeZQDm7aKKDmtgzhRn.diag
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 2654 Feb 8 00:02 pandaJob.out
[2024-02-08 00:09:55] drwxrwx--- 2 boinc boinc 4096 Feb 8 00:09 PanDA_Pilot-6102029178/
[2024-02-08 00:09:55] drwx------ 5 boinc boinc 4096 Feb 8 00:02 pilot3/
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 489859 Feb 8 00:01 pilot3.tar.gz
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 95 Feb 8 00:09 pilot_heartbeat.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 242642 Feb 8 00:09 pilotlog.txt
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 4388 Feb 8 00:01 queuedata.json
[2024-02-08 00:09:55] -rwxr-xr-x 1 boinc boinc 7986 Feb 8 00:02 run_atlas*
[2024-02-08 00:09:55] -rwx------ 1 boinc boinc 31343 Feb 8 00:01 runpilot2-wrapper.sh*
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 407 Feb 8 00:02 runtime_log
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 7849 Feb 8 00:02 runtime_log.err
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 424 Feb 8 00:02 setup.sh.local
[2024-02-08 00:09:55] drwxrwx--x 2 boinc boinc 4096 Feb 8 00:02 shared/
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 17642 Feb 8 00:02 start_atlas.sh
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 2142 Feb 8 00:02 stderr.txt
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 107 Feb 8 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 24 Feb 8 00:09 wrapper_checkpoint.txt
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue jobs had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue payloads had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue data_in had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue data_out had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue current_data_in had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue validated_jobs had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue validated_payloads had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue monitored_payloads had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue finished_jobs had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue finished_payloads had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_in had 1 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue finished_data_out had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue failed_jobs had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue failed_payloads had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_in had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue failed_data_out had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobs had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue completed_jobids has 1 job(s)
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.queuehandling | queue_report | queue messages had 0 job(s) [purged]
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.control.job | has_job_completed | job 6102029178 has completed (purged errors)
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | DEBUG | pilot.util.realtimelogger | cleanup | attempting real-time logger cleanup
[2024-02-08 00:09:55] 2024-02-08 05:09:35,000 | INFO | pilot.util.processes | cleanup | overall cleanup function is called
[2024-02-08 00:09:55] 2024-02-08 05:09:35,002 | DEBUG | pilot.util.processes | cleanup | work directory was removed: /var/lib/boinc-client/slots/3/PanDA_Pilot-6102029178
[2024-02-08 00:09:55] 2024-02-08 05:09:36,007 | INFO | pilot.info.jobdata | collect_zombies | --- collectZombieJob: --- 10, [365376]
[2024-02-08 00:09:55] 2024-02-08 05:09:36,007 | INFO | pilot.info.jobdata | collect_zombies | zombie collector waiting for pid 365376
[2024-02-08 00:09:55] 2024-02-08 05:09:36,007 | INFO | pilot.info.jobdata | collect_zombies | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-08 00:09:55] 2024-02-08 05:09:37,012 | INFO | pilot.util.processes | cleanup | collected zombie processes
[2024-02-08 00:09:55] 2024-02-08 05:09:37,013 | INFO | pilot.util.processes | cleanup | will now attempt to kill all subprocesses of pid=365376
[2024-02-08 00:09:55] 2024-02-08 05:09:37,018 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-08 00:09:55] 2024-02-08 05:09:37,051 | INFO | pilot.util.processes | kill_processes | process IDs to be killed: [365376] (in reverse order)
[2024-02-08 00:09:55] 2024-02-08 05:09:37,055 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-08 00:09:55] 2024-02-08 05:09:37,075 | WARNING | pilot.util.processes | kill_processes | found no corresponding commands to process id(s)
[2024-02-08 00:09:55] 2024-02-08 05:09:37,075 | INFO | pilot.util.processes | kill_orphans | Do not look for orphan processes in BOINC jobs
[2024-02-08 00:09:55] 2024-02-08 05:09:37,077 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 365376
[2024-02-08 00:09:55] 2024-02-08 05:09:37,079 | INFO | pilot.util.processes | kill_defunct_children | did not find any defunct processes belonging to 365376
[2024-02-08 00:09:55] 2024-02-08 05:09:37,079 | DEBUG | pilot.util.queuehandling | purge_queue | queue purged
[2024-02-08 00:09:55] 2024-02-08 05:09:37,080 | INFO | pilot.control.job | retrieve | ready for new job
[2024-02-08 00:09:55] 2024-02-08 05:09:37,080 | INFO | root | retrieve | pilot has finished with previous job - re-establishing logging
[2024-02-08 00:09:55] 2024-02-08 05:09:37,080 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2024-02-08 00:09:55] 2024-02-08 05:09:37,080 | INFO | pilot.util.auxiliary | pilot_version_banner | *** PanDA Pilot version 3.7.1.46 ***
[2024-02-08 00:09:55] 2024-02-08 05:09:37,080 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2024-02-08 00:09:55] 2024-02-08 05:09:37,080 | INFO | pilot.util.auxiliary | pilot_version_banner |
[2024-02-08 00:09:55] 2024-02-08 05:09:37,082 | INFO | pilot.util.auxiliary | display_architecture_info | architecture information:
[2024-02-08 00:09:55] 2024-02-08 05:09:37,082 | INFO | pilot.util.container | print_executable | executing command: cat /etc/os-release
[2024-02-08 00:09:55] 2024-02-08 05:09:37,086 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-08 00:09:55] 2024-02-08 05:09:37,089 | INFO | pilot.util.filehandling | dump | cat /etc/os-release:
[2024-02-08 00:09:55] NAME="CentOS Linux"
[2024-02-08 00:09:55] VERSION="7 (Core)"
[2024-02-08 00:09:55] ID="centos"
[2024-02-08 00:09:55] ID_LIKE="rhel fedora"
[2024-02-08 00:09:55] VERSION_ID="7"
[2024-02-08 00:09:55] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-08 00:09:55] ANSI_COLOR="0;31"
[2024-02-08 00:09:55] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-08 00:09:55] HOME_URL="https://www.centos.org/"
[2024-02-08 00:09:55] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-08 00:09:55]
[2024-02-08 00:09:55] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-08 00:09:55] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-08 00:09:55] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-08 00:09:55] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-08 00:09:55]
[2024-02-08 00:09:55] 2024-02-08 05:09:37,089 | INFO | pilot.util.auxiliary | pilot_version_banner | **************************************
[2024-02-08 00:09:55] 2024-02-08 05:09:37,592 | DEBUG | pilot.util.monitoring | check_local_space | checking local space on /var/lib/boinc-client/slots/3
[2024-02-08 00:09:55] 2024-02-08 05:09:37,592 | INFO | pilot.util.container | print_executable | executing command: df -mP /var/lib/boinc-client/slots/3
[2024-02-08 00:09:55] 2024-02-08 05:09:37,596 | DEBUG | pilot.util.container | execute | subprocess.communicate() will use timeout 864000 s
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | DEBUG | pilot.util.workernode | get_local_disk_space | stdout=Filesystem 1048576-blocks Used Available Capacity Mounted on
[2024-02-08 00:09:55] /dev/nvme2n1p3 491056 54416 411624 12% /var/lib/boinc-client/slots/3
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | DEBUG | pilot.util.workernode | get_local_disk_space | stderr=
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | INFO | pilot.util.monitoring | check_local_space | sufficient remaining disk space (431619047424 B)
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | WARNING | pilot.control.job | proceed_with_getjob | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | WARNING | pilot.control.job | retrieve | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | WARNING | pilot.control.monitor | control | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | INFO | pilot.util.queuehandling | abort_jobs_in_queues | found 0 job(s) in 20 queues
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | WARNING | pilot.control.monitor | run_checks | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-08 00:09:55] 2024-02-08 05:09:37,600 | WARNING | pilot.control.monitor | run_checks | will wait for a maximum of 300 s for threads to finish
[2024-02-08 00:09:55] 2024-02-08 05:09:37,636 | WARNING | pilot.util.common | should_abort | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-08 00:09:55] 2024-02-08 05:09:38,059 | INFO | pilot.control.data | control | all data control threads have been joined
[2024-02-08 00:09:55] 2024-02-08 05:09:38,059 | DEBUG | pilot.control.data | control | data control ending since graceful_stop has been set
[2024-02-08 00:09:55] 2024-02-08 05:09:38,389 | INFO | pilot.control.payload | control | all payload control threads have been joined
[2024-02-08 00:09:55] 2024-02-08 05:09:38,389 | DEBUG | pilot.control.payload | control | payload control ending since graceful_stop has been set
[2024-02-08 00:09:55] 2024-02-08 05:09:38,411 | WARNING | pilot.util.common | should_abort | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-08 00:09:55] 2024-02-08 05:09:38,412 | INFO | pilot.control.job | job_monitor | aborting loop
[2024-02-08 00:09:55] 2024-02-08 05:09:38,559 | INFO | pilot.control.job | control | all job control threads have been joined
[2024-02-08 00:09:55] 2024-02-08 05:09:38,559 | DEBUG | pilot.control.job | control | job control ending since graceful_stop has been set
[2024-02-08 00:09:55] 2024-02-08 05:09:38,605 | INFO | pilot.control.job | retrieve | [job] retrieve thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:38,966 | INFO | pilot.control.payload | execute_payloads | [payload] execute_payloads thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,033 | INFO | pilot.control.job | validate | [job] validate thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,064 | INFO | pilot.control.data | control | [data] control thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,115 | INFO | pilot.control.job | create_data_payload | [job] create_data_payload thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,178 | INFO | pilot.control.payload | validate_pre | [payload] validate_pre thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,394 | INFO | pilot.control.payload | control | [payload] control thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,417 | INFO | pilot.control.job | job_monitor | [job] job monitor thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,449 | INFO | pilot.control.data | copytool_in | [data] copytool_in thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,528 | INFO | pilot.control.payload | failed_post | [payload] failed_post thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,540 | WARNING | pilot.util.common | should_abort | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-08 00:09:55] 2024-02-08 05:09:39,564 | INFO | pilot.control.job | control | [job] control thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:39,641 | INFO | pilot.control.data | copytool_out | [data] copytool_out thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:40,047 | INFO | pilot.control.payload | validate_post | [payload] validate_post thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:40,161 | WARNING | pilot.util.common | should_abort | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-08 00:09:55] 2024-02-08 05:09:40,545 | INFO | pilot.control.job | queue_monitor | [job] queue monitor thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:44,166 | INFO | pilot.control.data | queue_monitoring | [data] queue_monitor thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:48,165 | INFO | pilot.control.payload | get_logging_info | job.realtimelogging is not enabled
[2024-02-08 00:09:55] 2024-02-08 05:09:48,165 | DEBUG | pilot.control.payload | run_realtimelog | real-time logging not needed at this point
[2024-02-08 00:09:55] 2024-02-08 05:09:48,165 | DEBUG | pilot.control.payload | run_realtimelog | realtime logger was not found, waiting ..
[2024-02-08 00:09:55] 2024-02-08 05:09:49,170 | INFO | pilot.control.payload | run_realtimelog | [payload] run_realtimelog thread has finished
[2024-02-08 00:09:55] 2024-02-08 05:09:49,902 | INFO | pilot.util.processes | threads_aborted | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140482
[2024-02-08 00:09:55] 2024-02-08 05:09:49,902 | DEBUG | pilot.workflow.generic | run | will proceed to set job_aborted
[2024-02-08 00:09:55] 2024-02-08 05:09:50,666 | WARNING | pilot.control.monitor | run_checks | job_aborted has been set - aborting pilot monitoring
[2024-02-08 00:09:55] 2024-02-08 05:09:50,666 | INFO | pilot.control.monitor | control | [monitor] control thread has ended
[2024-02-08 00:09:55] 2024-02-08 05:09:54,927 | DEBUG | pilot.workflow.generic | run | all relevant threads have aborted (thread count=1)
[2024-02-08 00:09:55] 2024-02-08 05:09:54,927 | INFO | pilot.workflow.generic | run | all workflow threads have been joined
[2024-02-08 00:09:55] 2024-02-08 05:09:54,927 | INFO | pilot.workflow.generic | run | end of generic workflow (traces error code: 0)
[2024-02-08 00:09:55] 2024-02-08 05:09:54,960 | DEBUG | pilot.util.processgroups | get_all_child_pids | python3(358147)---pstree(375874)
[2024-02-08 00:09:55]
[2024-02-08 00:09:55] 2024-02-08 05:09:54,960 | INFO | pilot.util.processgroups | find_defunct_subprocesses | child pids=[358147, 375874]
[2024-02-08 00:09:55] 2024-02-08 05:09:54,979 | DEBUG | pilot.util.processgroups | is_defunct | 358147: return code=0, stdout=SN
[2024-02-08 00:09:55] , stderr=
[2024-02-08 00:09:55] 2024-02-08 05:09:54,995 | DEBUG | pilot.util.processgroups | is_defunct | 375874: return code=1, stdout=, stderr=
[2024-02-08 00:09:55] 2024-02-08 05:09:54,995 | INFO | root | list_zombies | no defunct processes were found
[2024-02-08 00:09:55] 2024-02-08 05:09:54,995 | INFO | root | get_proper_exit_code | traces error code: 0
[2024-02-08 00:09:55] 2024-02-08 05:09:54,995 | INFO | root | wrap_up | pilot has finished (exit code=0, shell exit code=0)
[2024-02-08 00:09:55] 2024-02-08 05:09:55,031 [wrapper] ==== pilot stdout END ====
[2024-02-08 00:09:55] 2024-02-08 05:09:55,033 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-08 00:09:55] 2024-02-08 05:09:55,034 [wrapper] pilotpid: 358147
[2024-02-08 00:09:55] 2024-02-08 05:09:55,035 [wrapper] Pilot exit status: 0
[2024-02-08 00:09:55] 2024-02-08 05:09:55,039 [wrapper] pandaids: 6102029178
[2024-02-08 00:09:55] 2024-02-08 05:09:55,055 [wrapper] cleanup: SIGTERM to supervisor_pilot 358152 358148
[2024-02-08 00:09:55] 2024-02-08 05:09:55,056 [wrapper] Test setup, not cleaning
[2024-02-08 00:09:55] 2024-02-08 05:09:55,057 [wrapper] ==== wrapper stdout END ====
[2024-02-08 00:09:55] 2024-02-08 05:09:55,058 [wrapper] ==== wrapper stderr END ====
[2024-02-08 00:09:55] 2024-02-08 05:09:55,060 [wrapper] apfmon messages muted
[2024-02-08 00:09:55] *** Error codes and diagnostics ***
[2024-02-08 00:09:55] "exeErrorCode": 0,
[2024-02-08 00:09:55] "exeErrorDiag": "",
[2024-02-08 00:09:55] "pilotErrorCode": 0,
[2024-02-08 00:09:55] "pilotErrorDiag": "",
[2024-02-08 00:09:55] *** Listing of results directory ***
[2024-02-08 00:09:55] total 43764
[2024-02-08 00:09:55] -rwx------ 1 boinc boinc 31343 Feb 8 00:01 runpilot2-wrapper.sh
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 4388 Feb 8 00:01 queuedata.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 489859 Feb 8 00:01 pilot3.tar.gz
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 107 Feb 8 00:02 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-08 00:09:55] -rwxr-xr-x 1 boinc boinc 7986 Feb 8 00:02 run_atlas
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 112 Feb 8 00:02 job.xml
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 17642 Feb 8 00:02 start_atlas.sh
[2024-02-08 00:09:55] drwxrwx--x 2 boinc boinc 4096 Feb 8 00:02 shared
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 501761 Feb 8 00:02 input.tar.gz
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 9517 Feb 8 00:02 init_data.xml
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 37224345 Feb 8 00:02 EVNT.04972714._000026.pool.root.1
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 0 Feb 8 00:02 boinc_lockfile
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 2654 Feb 8 00:02 pandaJob.out
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 424 Feb 8 00:02 setup.sh.local
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 960241 Feb 8 00:02 agis_schedconf.cvmfs.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 0 Feb 8 00:02 agis_ddmendpoints.agis.ALL.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1342081 Feb 8 00:02 cric_ddmendpoints.json
[2024-02-08 00:09:55] drwx------ 5 boinc boinc 4096 Feb 8 00:02 pilot3
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 533 Feb 8 00:09 boinc_task_state.xml
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1574037 Feb 8 00:09 output.1.6df28b5c-1ca3-4bfc-8080-6bdd809bf0a2_2608.pool.root
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 95 Feb 8 00:09 pilot_heartbeat.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1001 Feb 8 00:09 memory_monitor_summary.json
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 159479 Feb 8 00:09 6df28b5c-1ca3-4bfc-8080-6bdd809bf0a2_2608.1.job.log.tgz
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 6593 Feb 8 00:09 heartbeat.json
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 8192 Feb 8 00:09 boinc_mmap_file
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 24 Feb 8 00:09 wrapper_checkpoint.txt
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 9970 Feb 8 00:09 pilotlog.txt
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 291039 Feb 8 00:09 6df28b5c-1ca3-4bfc-8080-6bdd809bf0a2_2608.1.job.log
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 460 Feb 8 00:09 output.list
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 744 Feb 8 00:09 runtime_log
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 2048000 Feb 8 00:09 result.tar.gz
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 12076 Feb 8 00:09 runtime_log.err
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 621 Feb 8 00:09 P2tMDmhiBs4n7Olcko1bjSoqABFKDmABFKDmyeZQDm7aKKDmtgzhRn.diag
[2024-02-08 00:09:55] -rw-r--r-- 1 boinc boinc 29511 Feb 8 00:09 stderr.txt
[2024-02-08 00:09:55] HITS file was successfully produced:
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1574037 Feb 8 00:09 shared/HITS.pool.root.1
[2024-02-08 00:09:55] *** Contents of shared directory: ***
[2024-02-08 00:09:55] total 40404
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 17642 Feb 8 00:02 start_atlas.sh
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 501761 Feb 8 00:02 input.tar.gz
[2024-02-08 00:09:55] -rw-r--r-- 2 boinc boinc 37224345 Feb 8 00:02 ATLAS.root_0
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 1574037 Feb 8 00:09 HITS.pool.root.1
[2024-02-08 00:09:55] -rw------- 1 boinc boinc 2048000 Feb 8 00:09 result.tar.gz
00:09:56 (354403): run_atlas exited; CPU time 182.276904
00:09:56 (354403): called boinc_finish(0)
</stderr_txt>
]]>
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