Stderr output

<core_client_version>7.20.5</core_client_version>
<![CDATA[
<stderr_txt>
00:53:29 (382184): wrapper (7.7.26015): starting
00:53:29 (382184): wrapper: running run_atlas (--nthreads 5)
[2024-02-08 00:53:29] Arguments: --nthreads 5
[2024-02-08 00:53:29] Threads: 5
[2024-02-08 00:53:29] Checking for CVMFS
[2024-02-08 00:53:30] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-08 00:53:32] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-08 00:53:32] Running cvmfs_config stat atlas.cern.ch
[2024-02-08 00:53:32] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-08 00:53:32] 2.11.2.0 382393 0 25484 129132 3 1 2726447 4096001 0 130560 0 0 100.000 0 0 http://s1bnl-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-08 00:53:32] CVMFS is ok
[2024-02-08 00:53:32] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-08 00:53:32] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-08 00:53:32] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-08 00:53:32] Further information can be found at the LHC@home message board.
[2024-02-08 00:53:32] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-08 00:53:32] Checking for apptainer binary...
[2024-02-08 00:53:32] apptainer is not installed, using version from CVMFS
[2024-02-08 00:53:32] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-08 00:53:32] x32-kubuntu
[2024-02-08 00:53:32] apptainer works
[2024-02-08 00:53:32] Set ATHENA_PROC_NUMBER=5
[2024-02-08 00:53:32] Set ATHENA_CORE_NUMBER=5
[2024-02-08 00:53:32] Starting ATLAS job with PandaID=6102033000
[2024-02-08 00:53:32] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-08 01:12:12]  *** The last 200 lines of the pilot log: ***
[2024-02-08 01:12:12] 2024-02-08 06:11:12,511 | INFO     | monitor loop #184: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:12,511 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:15,014 | INFO     | monitor loop #185: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:15,014 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:17,517 | INFO     | monitor loop #186: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:17,517 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:20,017 | INFO     | monitor loop #187: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:20,017 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:22,520 | INFO     | monitor loop #188: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:22,520 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:25,023 | INFO     | monitor loop #189: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:25,023 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:25,313 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-08 01:12:12] 2024-02-08 06:11:25,894 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-08 01:12:12] 2024-02-08 06:11:25,894 | INFO     | will try again after 22s..
[2024-02-08 01:12:12] 2024-02-08 06:11:27,526 | INFO     | monitor loop #190: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:27,526 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:30,029 | INFO     | monitor loop #191: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:30,029 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:32,532 | INFO     | monitor loop #192: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:32,532 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:35,035 | INFO     | monitor loop #193: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:35,035 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:37,537 | INFO     | monitor loop #194: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:37,538 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:39,063 | INFO     | 1080s have passed since pilot start
[2024-02-08 01:12:12] 2024-02-08 06:11:40,041 | INFO     | monitor loop #195: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:40,041 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:42,544 | INFO     | monitor loop #196: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:42,544 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:45,047 | INFO     | monitor loop #197: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:45,047 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:47,549 | INFO     | monitor loop #198: job 0:6102033000 is in state 'stageout'
[2024-02-08 01:12:12] 2024-02-08 06:11:47,549 | WARNING  | aborting job monitor tasks since payload process 394039 is not running
[2024-02-08 01:12:12] 2024-02-08 06:11:47,994 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-08 01:12:12] 2024-02-08 06:11:48,299 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-08 01:12:12] 2024-02-08 06:11:48,300 | WARNING  | cache file=/var/lib/boinc-client/slots/2/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/2/agis
[2024-02-08 01:12:12] 2024-02-08 06:11:48,319 | INFO     | transferring file fc681b01-7e79-4882-8ad4-d1a1f5d5448b_72571.1.job.log.tgz from /var/lib/boinc-client/slots/2/PanDA_Pilot-6102033000/fc681b01-7e79-4882-8ad4-d1a1f5
[2024-02-08 01:12:12] 2024-02-08 06:11:48,319 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6102033000/fc681b01-7e79-4882-8ad4-d1a1f5d5448b_72571.1.job.log.tgz /var/lib/boinc-cli
[2024-02-08 01:12:12] 2024-02-08 06:11:48,330 | INFO     | Adding to output.list: fc681b01-7e79-4882-8ad4-d1a1f5d5448b_72571.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/ce/e5/fc681b01-7e79-
[2024-02-08 01:12:12] 2024-02-08 06:11:48,330 | INFO     | summary of transferred files:
[2024-02-08 01:12:12] 2024-02-08 06:11:48,330 | INFO     |  -- lfn=fc681b01-7e79-4882-8ad4-d1a1f5d5448b_72571.1.job.log.tgz, status_code=0, status=transferred
[2024-02-08 01:12:12] 2024-02-08 06:11:48,330 | INFO     | stage-out finished correctly
[2024-02-08 01:12:12] 2024-02-08 06:11:48,362 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-08 01:12:12] 2024-02-08 06:11:50,052 | INFO     | monitor loop #199: job 0:6102033000 is in state 'finished'
[2024-02-08 01:12:12] 2024-02-08 06:11:50,052 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 01:12:12] 2024-02-08 06:11:50,987 | INFO     | job 6102033000 has state=finished
[2024-02-08 01:12:12] 2024-02-08 06:11:50,987 | INFO     | preparing for final server update for job 6102033000 in state='finished'
[2024-02-08 01:12:12] 2024-02-08 06:11:50,987 | INFO     | this job has now completed (state=finished)
[2024-02-08 01:12:12] 2024-02-08 06:11:50,987 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-08 01:12:12] 2024-02-08 06:11:50,987 | INFO     | job 6102033000 has finished - writing final server update
[2024-02-08 01:12:12] 2024-02-08 06:11:50,987 | INFO     | total number of processed events: 2 (read)
[2024-02-08 01:12:12] 2024-02-08 06:11:50,989 | INFO     | executing command: lscpu
[2024-02-08 01:12:12] 2024-02-08 06:11:51,005 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-08 01:12:12] 2024-02-08 06:11:51,005 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-08 01:12:12] 2024-02-08 06:11:51,023 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-08 01:12:12] 2024-02-08 06:11:52,553 | INFO     | monitor loop #200: job 0:6102033000 is in state 'finished'
[2024-02-08 01:12:12] 2024-02-08 06:11:52,553 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 01:12:12] 2024-02-08 06:11:52,648 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-08 01:12:12] 2024-02-08 06:11:52,649 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6102033000/memory_monitor_summary.json (trf name=prmon)
[2024-02-08 01:12:12] 2024-02-08 06:11:52,649 | INFO     | extracted standard info from prmon json
[2024-02-08 01:12:12] 2024-02-08 06:11:52,649 | INFO     | extracted standard memory fields from prmon json
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | WARNING  | wrong length of table data, x=[1707372152.0], y=[1705147.0] (must be same and length>=4)
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | ..............................
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . Timing measurements:
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . get job = 79 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . initial setup = 87 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . payload setup = 4 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . stage-in = 49 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . payload execution = 466 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . stage-out = 392 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | . log creation = 0 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,650 | INFO     | ..............................
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | 
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | job summary report
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | --------------------------------------------------
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | PanDA job id: 6102033000
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | task id: NULL
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | errors: (none)
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | pilot state: finished 
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | transexitcode: 0
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | exeerrorcode: 0
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | exeerrordiag: 
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | exitcode: 0
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | exitmsg: OK
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | cpuconsumptiontime: 235 s
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | nevents: 2
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | neventsw: 0
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | pid: 394039
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | pgrp: 394039
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | corecount: 5
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | event service: False
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | sizes: {0: 2407086, 1: 2407228, 11: 2407374, 22: 2407402, 32: 2407430, 43: 2407458, 52: 2407674, 54: 2407702, 474: 2427284, 475: 2427283, 868: 2436739, 872: 243690
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | --------------------------------------------------
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | 
[2024-02-08 01:12:12] 2024-02-08 06:11:52,681 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2024-02-08 01:12:12] 2024-02-08 06:11:52,691 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,691 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,691 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,691 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | job 6102033000 has completed (purged errors)
[2024-02-08 01:12:12] 2024-02-08 06:11:52,692 | INFO     | overall cleanup function is called
[2024-02-08 01:12:12] 2024-02-08 06:11:53,699 | INFO     | --- collectZombieJob: --- 10, [394039]
[2024-02-08 01:12:12] 2024-02-08 06:11:53,699 | INFO     | zombie collector waiting for pid 394039
[2024-02-08 01:12:12] 2024-02-08 06:11:53,699 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-08 01:12:12] 2024-02-08 06:11:54,701 | INFO     | collected zombie processes
[2024-02-08 01:12:12] 2024-02-08 06:11:54,701 | INFO     | will now attempt to kill all subprocesses of pid=394039
[2024-02-08 01:12:12] 2024-02-08 06:11:54,738 | INFO     | process IDs to be killed: [394039] (in reverse order)
[2024-02-08 01:12:12] 2024-02-08 06:11:54,764 | WARNING  | found no corresponding commands to process id(s)
[2024-02-08 01:12:12] 2024-02-08 06:11:54,764 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-08 01:12:12] 2024-02-08 06:11:54,766 | INFO     | did not find any defunct processes belonging to 394039
[2024-02-08 01:12:12] 2024-02-08 06:11:54,767 | INFO     | did not find any defunct processes belonging to 394039
[2024-02-08 01:12:12] 2024-02-08 06:11:54,767 | INFO     | ready for new job
[2024-02-08 01:12:12] 2024-02-08 06:11:54,767 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-08 01:12:12] 2024-02-08 06:11:54,768 | INFO     | **************************************
[2024-02-08 01:12:12] 2024-02-08 06:11:54,768 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-08 01:12:12] 2024-02-08 06:11:54,768 | INFO     | **************************************
[2024-02-08 01:12:12] 2024-02-08 06:11:54,768 | INFO     | 
[2024-02-08 01:12:12] 2024-02-08 06:11:54,769 | INFO     | architecture information:
[2024-02-08 01:12:12] 2024-02-08 06:11:54,769 | INFO     | executing command: cat /etc/os-release
[2024-02-08 01:12:12] 2024-02-08 06:11:54,775 | INFO     | cat /etc/os-release:
[2024-02-08 01:12:12] NAME="CentOS Linux"
[2024-02-08 01:12:12] VERSION="7 (Core)"
[2024-02-08 01:12:12] ID="centos"
[2024-02-08 01:12:12] ID_LIKE="rhel fedora"
[2024-02-08 01:12:12] VERSION_ID="7"
[2024-02-08 01:12:12] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-08 01:12:12] ANSI_COLOR="0;31"
[2024-02-08 01:12:12] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-08 01:12:12] HOME_URL="https://www.centos.org/"
[2024-02-08 01:12:12] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-08 01:12:12] 
[2024-02-08 01:12:12] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-08 01:12:12] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-08 01:12:12] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-08 01:12:12] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-08 01:12:12] 
[2024-02-08 01:12:12] 2024-02-08 06:11:54,776 | INFO     | **************************************
[2024-02-08 01:12:12] 2024-02-08 06:11:55,278 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2024-02-08 01:12:12] 2024-02-08 06:11:55,287 | INFO     | sufficient remaining disk space (431606464512 B)
[2024-02-08 01:12:12] 2024-02-08 06:11:55,287 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-08 01:12:12] 2024-02-08 06:11:55,287 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-08 01:12:12] 2024-02-08 06:11:55,287 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-08 01:12:12] 2024-02-08 06:11:56,061 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-08 01:12:12] 2024-02-08 06:11:56,061 | INFO     | aborting loop
[2024-02-08 01:12:12] 2024-02-08 06:11:56,103 | INFO     | found 0 job(s) in 20 queues
[2024-02-08 01:12:12] 2024-02-08 06:11:56,103 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-08 01:12:12] 2024-02-08 06:11:56,103 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-08 01:12:12] 2024-02-08 06:11:56,292 | INFO     | [job] retrieve thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:56,374 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-08 01:12:12] 2024-02-08 06:11:56,624 | INFO     | [payload] failed_post thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,021 | INFO     | [payload] control thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,039 | INFO     | [payload] execute_payloads thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,064 | INFO     | [job] job monitor thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,130 | INFO     | [job] control thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,149 | INFO     | [payload] validate_post thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,214 | INFO     | [job] validate thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,235 | INFO     | [data] control thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,355 | INFO     | [job] create_data_payload thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,407 | INFO     | [payload] validate_pre thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,526 | INFO     | [data] copytool_in thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:57,691 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-08 01:12:12] 2024-02-08 06:11:58,379 | INFO     | [data] copytool_out thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:58,696 | INFO     | [job] queue monitor thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:11:59,293 | INFO     | [data] queue_monitor thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:12:05,506 | INFO     | job.realtimelogging is not enabled
[2024-02-08 01:12:12] 2024-02-08 06:12:06,512 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-08 01:12:12] 2024-02-08 06:12:07,492 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140456530523968)>', '<ExcThread(monitor, started 140455882774272)>']
[2024-02-08 01:12:12] 2024-02-08 06:12:08,161 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-08 01:12:12] 2024-02-08 06:12:08,161 | INFO     | [monitor] control thread has ended
[2024-02-08 01:12:12] 2024-02-08 06:12:12,501 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-08 01:12:12] 2024-02-08 06:12:12,501 | INFO     | traces error code: 0
[2024-02-08 01:12:12] 2024-02-08 06:12:12,501 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-08 01:12:12] 2024-02-08 06:12:12,532 [wrapper] ==== pilot stdout END ====
[2024-02-08 01:12:12] 2024-02-08 06:12:12,533 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-08 01:12:12] 2024-02-08 06:12:12,535 [wrapper] pilotpid: 386495
[2024-02-08 01:12:12] 2024-02-08 06:12:12,536 [wrapper] Pilot exit status: 0
[2024-02-08 01:12:12] 2024-02-08 06:12:12,541 [wrapper] pandaids: 6102033000
[2024-02-08 01:12:12] 2024-02-08 06:12:12,557 [wrapper] cleanup: SIGTERM to supervisor_pilot  420613 386496
[2024-02-08 01:12:12] 2024-02-08 06:12:12,559 [wrapper] Test setup, not cleaning
[2024-02-08 01:12:12] 2024-02-08 06:12:12,560 [wrapper] ==== wrapper stdout END ====
[2024-02-08 01:12:12] 2024-02-08 06:12:12,561 [wrapper] ==== wrapper stderr END ====
[2024-02-08 01:12:12] 2024-02-08 06:12:12,564 [wrapper] apfmon messages muted
[2024-02-08 01:12:12]  *** Error codes and diagnostics ***
[2024-02-08 01:12:12]     "exeErrorCode": 0,
[2024-02-08 01:12:12]     "exeErrorDiag": "",
[2024-02-08 01:12:12]     "pilotErrorCode": 0,
[2024-02-08 01:12:12]     "pilotErrorDiag": "",
[2024-02-08 01:12:12]  *** Listing of results directory ***
[2024-02-08 01:12:12] total 45588
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc   441289 Feb  7 23:24 pilot3.tar.gz
[2024-02-08 01:12:12] -rwx------ 1 boinc boinc    31345 Feb  8 00:07 runpilot2-wrapper.sh
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc     4388 Feb  8 00:07 queuedata.json
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc      107 Feb  8 00:53 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-08 01:12:12] -rwxr-xr-x 1 boinc boinc     7986 Feb  8 00:53 run_atlas
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc      112 Feb  8 00:53 job.xml
[2024-02-08 01:12:12] -rw-r--r-- 2 boinc boinc    17618 Feb  8 00:53 start_atlas.sh
[2024-02-08 01:12:12] drwxrwx--x 2 boinc boinc     4096 Feb  8 00:53 shared
[2024-02-08 01:12:12] -rw-r--r-- 2 boinc boinc   453821 Feb  8 00:53 input.tar.gz
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc     9517 Feb  8 00:53 init_data.xml
[2024-02-08 01:12:12] -rw-r--r-- 2 boinc boinc 38971704 Feb  8 00:53 EVNT.04972714._000035.pool.root.1
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc        0 Feb  8 00:53 boinc_lockfile
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc     2758 Feb  8 00:53 pandaJob.out
[2024-02-08 01:12:12] -rw------- 1 boinc boinc      424 Feb  8 00:53 setup.sh.local
[2024-02-08 01:12:12] -rw------- 1 boinc boinc  1342081 Feb  8 00:55 cric_ddmendpoints.json
[2024-02-08 01:12:12] -rw------- 1 boinc boinc   960217 Feb  8 00:55 agis_schedconf.cvmfs.json
[2024-02-08 01:12:12] drwx------ 4 boinc boinc     4096 Feb  8 00:56 pilot3
[2024-02-08 01:12:12] -rw------- 1 boinc boinc  1847309 Feb  8 01:05 output.1.fc681b01-7e79-4882-8ad4-d1a1f5d5448b_72571.pool.root
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc      532 Feb  8 01:05 boinc_task_state.xml
[2024-02-08 01:12:12] -rw------- 1 boinc boinc     1000 Feb  8 01:05 memory_monitor_summary.json
[2024-02-08 01:12:12] -rw------- 1 boinc boinc   151283 Feb  8 01:08 fc681b01-7e79-4882-8ad4-d1a1f5d5448b_72571.1.job.log.tgz
[2024-02-08 01:12:12] -rw------- 1 boinc boinc     6623 Feb  8 01:11 heartbeat.json
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc     8192 Feb  8 01:12 boinc_mmap_file
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc       25 Feb  8 01:12 wrapper_checkpoint.txt
[2024-02-08 01:12:12] -rw------- 1 boinc boinc     3981 Feb  8 01:12 pilotlog.txt
[2024-02-08 01:12:12] -rw------- 1 boinc boinc   146070 Feb  8 01:12 fc681b01-7e79-4882-8ad4-d1a1f5d5448b_72571.1.job.log
[2024-02-08 01:12:12] -rw------- 1 boinc boinc      464 Feb  8 01:12 output.list
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc      748 Feb  8 01:12 runtime_log
[2024-02-08 01:12:12] -rw------- 1 boinc boinc  2160640 Feb  8 01:12 result.tar.gz
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc    12103 Feb  8 01:12 runtime_log.err
[2024-02-08 01:12:12] -rw------- 1 boinc boinc      625 Feb  8 01:12 hQnNDmwnBs4n7Olcko1bjSoqABFKDmABFKDmyeZQDm8aKKDmmNi0Do.diag
[2024-02-08 01:12:12] -rw-r--r-- 1 boinc boinc    23339 Feb  8 01:12 stderr.txt
[2024-02-08 01:12:12] HITS file was successfully produced:
[2024-02-08 01:12:12] -rw------- 1 boinc boinc 1847309 Feb  8 01:05 shared/HITS.pool.root.1
[2024-02-08 01:12:12]  *** Contents of shared directory: ***
[2024-02-08 01:12:12] total 42444
[2024-02-08 01:12:12] -rw-r--r-- 2 boinc boinc    17618 Feb  8 00:53 start_atlas.sh
[2024-02-08 01:12:12] -rw-r--r-- 2 boinc boinc   453821 Feb  8 00:53 input.tar.gz
[2024-02-08 01:12:12] -rw-r--r-- 2 boinc boinc 38971704 Feb  8 00:53 ATLAS.root_0
[2024-02-08 01:12:12] -rw------- 1 boinc boinc  1847309 Feb  8 01:05 HITS.pool.root.1
[2024-02-08 01:12:12] -rw------- 1 boinc boinc  2160640 Feb  8 01:12 result.tar.gz
01:12:14 (382184): run_atlas exited; CPU time 232.778469
01:12:14 (382184): called boinc_finish(0)

</stderr_txt>
]]>

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