Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
16:29:58 (5204): wrapper (7.7.26015): starting
16:29:58 (5204): wrapper: running run_atlas (--nthreads 1)
[2024-02-08 16:29:58] Arguments: --nthreads 1
[2024-02-08 16:29:58] Threads: 1
[2024-02-08 16:29:58] Checking for CVMFS
[2024-02-08 16:30:05] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-08 16:30:09] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-08 16:30:10] Running cvmfs_config stat atlas.cern.ch
[2024-02-08 16:30:11] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-08 16:30:11] 2.10.1.0 5426 0 25036 129158 3 1 49635 4096001 0 130560 0 0 0.000 963 1090 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-08 16:30:11] CVMFS is ok
[2024-02-08 16:30:11] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-08 16:30:11] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-08 16:30:11] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-08 16:30:11] Further information can be found at the LHC@home message board.
[2024-02-08 16:30:11] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-08 16:30:11] Checking for apptainer binary...
[2024-02-08 16:30:11] apptainer is not installed, using version from CVMFS
[2024-02-08 16:30:11] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-08 16:30:25] UBMVB2004
[2024-02-08 16:30:25] apptainer works
[2024-02-08 16:30:25] Starting ATLAS job with PandaID=6102303078
[2024-02-08 16:30:25] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/1 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-08 17:07:30]  *** The last 200 lines of the pilot log: ***
[2024-02-08 17:07:30] 2024-02-08 16:06:25,613 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:28,123 | INFO     | monitor loop #292: job 0:6102303078 is in state 'stageout'
[2024-02-08 17:07:30] 2024-02-08 16:06:28,124 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:30,629 | INFO     | monitor loop #293: job 0:6102303078 is in state 'stageout'
[2024-02-08 17:07:30] 2024-02-08 16:06:30,630 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:33,352 | INFO     | monitor loop #294: job 0:6102303078 is in state 'stageout'
[2024-02-08 17:07:30] 2024-02-08 16:06:33,366 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:35,892 | INFO     | monitor loop #295: job 0:6102303078 is in state 'stageout'
[2024-02-08 17:07:30] 2024-02-08 16:06:35,893 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:38,409 | INFO     | monitor loop #296: job 0:6102303078 is in state 'stageout'
[2024-02-08 17:07:30] 2024-02-08 16:06:38,410 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:40,995 | INFO     | monitor loop #297: job 0:6102303078 is in state 'stageout'
[2024-02-08 17:07:30] 2024-02-08 16:06:41,019 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:43,535 | INFO     | monitor loop #298: job 0:6102303078 is in state 'stageout'
[2024-02-08 17:07:30] 2024-02-08 16:06:43,535 | WARNING  | aborting job monitor tasks since payload process 16380 is not running
[2024-02-08 17:07:30] 2024-02-08 16:06:43,824 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-08 17:07:30] 2024-02-08 16:06:43,961 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-08 17:07:30] 2024-02-08 16:06:43,961 | WARNING  | cache file=/var/lib/boinc-client/slots/1/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/1/agis
[2024-02-08 17:07:30] 2024-02-08 16:06:44,023 | INFO     | transferring file e97738a6-603c-49e9-89a3-ae5d9ef236cc_30519.1.job.log.tgz from /var/lib/boinc-client/slots/1/PanDA_Pilot-6102303078/e97738a6-603c-49e9-89a3-ae5d9e
[2024-02-08 17:07:30] 2024-02-08 16:06:44,024 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/1/PanDA_Pilot-6102303078/e97738a6-603c-49e9-89a3-ae5d9ef236cc_30519.1.job.log.tgz /var/lib/boinc-cli
[2024-02-08 17:07:30] 2024-02-08 16:06:44,152 | INFO     | Adding to output.list: e97738a6-603c-49e9-89a3-ae5d9ef236cc_30519.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/61/3f/e97738a6-603c-
[2024-02-08 17:07:30] 2024-02-08 16:06:44,155 | INFO     | summary of transferred files:
[2024-02-08 17:07:30] 2024-02-08 16:06:44,155 | INFO     |  -- lfn=e97738a6-603c-49e9-89a3-ae5d9ef236cc_30519.1.job.log.tgz, status_code=0, status=transferred
[2024-02-08 17:07:30] 2024-02-08 16:06:44,155 | INFO     | stage-out finished correctly
[2024-02-08 17:07:30] 2024-02-08 16:06:46,002 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-08 17:07:30] 2024-02-08 16:06:46,328 | INFO     | monitor loop #299: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:06:46,329 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:06:47,822 | INFO     | job 6102303078 has state=finished
[2024-02-08 17:07:30] 2024-02-08 16:06:47,822 | INFO     | preparing for final server update for job 6102303078 in state='finished'
[2024-02-08 17:07:30] 2024-02-08 16:06:47,823 | INFO     | this job has now completed (state=finished)
[2024-02-08 17:07:30] 2024-02-08 16:06:47,823 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-08 17:07:30] 2024-02-08 16:06:47,823 | INFO     | job 6102303078 has finished - writing final server update
[2024-02-08 17:07:30] 2024-02-08 16:06:47,823 | INFO     | total number of processed events: 2 (read)
[2024-02-08 17:07:30] 2024-02-08 16:06:47,828 | INFO     | executing command: lscpu
[2024-02-08 17:07:30] 2024-02-08 16:06:47,892 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2024-02-08 17:07:30] 2024-02-08 16:06:47,893 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-08 17:07:30] 2024-02-08 16:06:47,999 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-08 17:07:30] 2024-02-08 16:06:48,854 | INFO     | monitor loop #300: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:06:48,855 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:06:51,359 | INFO     | monitor loop #301: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:06:51,359 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:06:53,876 | INFO     | monitor loop #302: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:06:53,877 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:06:56,381 | INFO     | monitor loop #303: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:06:56,382 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:06:58,890 | INFO     | monitor loop #304: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:06:58,890 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:07:01,398 | INFO     | monitor loop #305: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:07:01,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:07:03,911 | INFO     | monitor loop #306: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:07:03,911 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:07:06,421 | INFO     | monitor loop #307: job 0:6102303078 is in state 'finished'
[2024-02-08 17:07:30] 2024-02-08 16:07:06,424 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 17:07:30] 2024-02-08 16:07:08,113 | INFO     | CPU arch script returned: x86-64-v2
[2024-02-08 17:07:30] 2024-02-08 16:07:08,113 | INFO     | using path: /var/lib/boinc-client/slots/1/PanDA_Pilot-6102303078/memory_monitor_summary.json (trf name=prmon)
[2024-02-08 17:07:30] 2024-02-08 16:07:08,114 | INFO     | extracted standard info from prmon json
[2024-02-08 17:07:30] 2024-02-08 16:07:08,114 | INFO     | extracted standard memory fields from prmon json
[2024-02-08 17:07:30] 2024-02-08 16:07:08,116 | INFO     | fitting pss+swap vs Time
[2024-02-08 17:07:30] 2024-02-08 16:07:08,116 | INFO     | current memory leak: 1634.29 B/s (using 16 data points, chi2=0.72)
[2024-02-08 17:07:30] 2024-02-08 16:07:08,122 | INFO     | ..............................
[2024-02-08 17:07:30] 2024-02-08 16:07:08,122 | INFO     | . Timing measurements:
[2024-02-08 17:07:30] 2024-02-08 16:07:08,122 | INFO     | . get job = 69 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,122 | INFO     | . initial setup = 59 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,122 | INFO     | . payload setup = 79 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,123 | INFO     | . stage-in = 71 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,123 | INFO     | . payload execution = 1393 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,123 | INFO     | . stage-out = 392 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,123 | INFO     | . log creation = 0 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,123 | INFO     | ..............................
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | 
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | job summary report
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | --------------------------------------------------
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | PanDA job id: 6102303078
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | task id: NULL
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | errors: (none)
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | pilot state: finished 
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | transexitcode: 0
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | exeerrorcode: 0
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | exeerrordiag: 
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | exitcode: 0
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | exitmsg: OK
[2024-02-08 17:07:30] 2024-02-08 16:07:08,225 | INFO     | cpuconsumptiontime: 759 s
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | nevents: 2
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | neventsw: 0
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | pid: 16380
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | pgrp: 16380
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | corecount: 1
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | event service: False
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | sizes: {0: 2405649, 1: 2406257, 2: 2407220, 13: 2407220, 24: 2407422, 34: 2407450, 45: 2407606, 56: 2407634, 67: 2407662, 78: 2407690, 89: 2407746, 90: 2408114, 99
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | --------------------------------------------------
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | 
[2024-02-08 17:07:30] 2024-02-08 16:07:08,228 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/1
[2024-02-08 17:07:30] 2024-02-08 16:07:08,309 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | job 6102303078 has completed (purged errors)
[2024-02-08 17:07:30] 2024-02-08 16:07:08,310 | INFO     | overall cleanup function is called
[2024-02-08 17:07:30] 2024-02-08 16:07:09,345 | INFO     | --- collectZombieJob: --- 10, [16380]
[2024-02-08 17:07:30] 2024-02-08 16:07:09,348 | INFO     | zombie collector waiting for pid 16380
[2024-02-08 17:07:30] 2024-02-08 16:07:09,349 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-08 17:07:30] 2024-02-08 16:07:10,362 | INFO     | collected zombie processes
[2024-02-08 17:07:30] 2024-02-08 16:07:10,362 | INFO     | will now attempt to kill all subprocesses of pid=16380
[2024-02-08 17:07:30] 2024-02-08 16:07:10,450 | INFO     | process IDs to be killed: [16380] (in reverse order)
[2024-02-08 17:07:30] 2024-02-08 16:07:10,542 | WARNING  | found no corresponding commands to process id(s)
[2024-02-08 17:07:30] 2024-02-08 16:07:10,542 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-08 17:07:30] 2024-02-08 16:07:10,544 | INFO     | did not find any defunct processes belonging to 16380
[2024-02-08 17:07:30] 2024-02-08 16:07:10,545 | INFO     | did not find any defunct processes belonging to 16380
[2024-02-08 17:07:30] 2024-02-08 16:07:10,545 | INFO     | ready for new job
[2024-02-08 17:07:30] 2024-02-08 16:07:10,545 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-08 17:07:30] 2024-02-08 16:07:10,546 | INFO     | **************************************
[2024-02-08 17:07:30] 2024-02-08 16:07:10,546 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-08 17:07:30] 2024-02-08 16:07:10,546 | INFO     | **************************************
[2024-02-08 17:07:30] 2024-02-08 16:07:10,546 | INFO     | 
[2024-02-08 17:07:30] 2024-02-08 16:07:10,546 | INFO     | pilot is running in a VM
[2024-02-08 17:07:30] 2024-02-08 16:07:10,546 | INFO     | architecture information:
[2024-02-08 17:07:30] 2024-02-08 16:07:10,551 | INFO     | executing command: cat /etc/os-release
[2024-02-08 17:07:30] 2024-02-08 16:07:10,595 | INFO     | cat /etc/os-release:
[2024-02-08 17:07:30] NAME="CentOS Linux"
[2024-02-08 17:07:30] VERSION="7 (Core)"
[2024-02-08 17:07:30] ID="centos"
[2024-02-08 17:07:30] ID_LIKE="rhel fedora"
[2024-02-08 17:07:30] VERSION_ID="7"
[2024-02-08 17:07:30] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-08 17:07:30] ANSI_COLOR="0;31"
[2024-02-08 17:07:30] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-08 17:07:30] HOME_URL="https://www.centos.org/"
[2024-02-08 17:07:30] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-08 17:07:30] 
[2024-02-08 17:07:30] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-08 17:07:30] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-08 17:07:30] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-08 17:07:30] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-08 17:07:30] 
[2024-02-08 17:07:30] 2024-02-08 16:07:10,595 | INFO     | **************************************
[2024-02-08 17:07:30] 2024-02-08 16:07:11,114 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/1
[2024-02-08 17:07:30] 2024-02-08 16:07:11,161 | INFO     | sufficient remaining disk space (53828648960 B)
[2024-02-08 17:07:30] 2024-02-08 16:07:11,161 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-08 17:07:30] 2024-02-08 16:07:11,162 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-08 17:07:30] 2024-02-08 16:07:11,162 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-08 17:07:30] 2024-02-08 16:07:11,163 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-08 17:07:30] 2024-02-08 16:07:11,163 | INFO     | found 0 job(s) in 20 queues
[2024-02-08 17:07:30] 2024-02-08 16:07:11,164 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-08 17:07:30] 2024-02-08 16:07:11,164 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-08 17:07:30] 2024-02-08 16:07:11,567 | WARNING  | job monitor detected an abort_job request (signal=args.signal)
[2024-02-08 17:07:30] 2024-02-08 16:07:11,567 | WARNING  | cannot recover job monitoring - aborting pilot
[2024-02-08 17:07:30] 2024-02-08 16:07:11,568 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-08 17:07:30] 2024-02-08 16:07:11,568 | INFO     | will abort loop
[2024-02-08 17:07:30] 2024-02-08 16:07:12,179 | INFO     | [job] retrieve thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:12,192 | INFO     | [payload] validate_post thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:12,242 | INFO     | [data] control thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:12,313 | INFO     | [job] create_data_payload thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:12,543 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-08 17:07:30] 2024-02-08 16:07:12,544 | INFO     | [payload] control thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:12,568 | INFO     | [data] copytool_in thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:12,574 | INFO     | [job] job monitor thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:13,266 | INFO     | [payload] execute_payloads thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:13,268 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-08 17:07:30] 2024-02-08 16:07:13,274 | INFO     | [job] validate thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:13,343 | INFO     | [payload] validate_pre thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:13,607 | INFO     | [payload] failed_post thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:14,355 | INFO     | [job] queue monitor thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:14,447 | INFO     | [job] control thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:14,777 | INFO     | [data] copytool_out thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:15,363 | INFO     | [data] queue_monitor thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:21,827 | INFO     | job.realtimelogging is not enabled
[2024-02-08 17:07:30] 2024-02-08 16:07:22,902 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-08 17:07:30] 2024-02-08 16:07:24,953 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140629475088192)>', '<ExcThread(monitor, started 140628704884480)>']
[2024-02-08 17:07:30] 2024-02-08 16:07:25,571 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-08 17:07:30] 2024-02-08 16:07:25,571 | INFO     | [monitor] control thread has ended
[2024-02-08 17:07:30] 2024-02-08 16:07:29,982 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-08 17:07:30] 2024-02-08 16:07:29,983 | INFO     | traces error code: 0
[2024-02-08 17:07:30] 2024-02-08 16:07:29,984 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-08 17:07:30] 2024-02-08 16:07:30,220 [wrapper] ==== pilot stdout END ====
[2024-02-08 17:07:30] 2024-02-08 16:07:30,232 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-08 17:07:30] 2024-02-08 16:07:30,243 [wrapper] pilotpid: 9431
[2024-02-08 17:07:30] 2024-02-08 16:07:30,257 [wrapper] Pilot exit status: 0
[2024-02-08 17:07:30] 2024-02-08 16:07:30,361 [wrapper] pandaids: 6102303078
[2024-02-08 17:07:30] 2024-02-08 16:07:30,420 [wrapper] cleanup: SIGTERM to supervisor_pilot   23821 9432
[2024-02-08 17:07:30] 2024-02-08 16:07:30,434 [wrapper] Test setup, not cleaning
[2024-02-08 17:07:30] 2024-02-08 16:07:30,447 [wrapper] ==== wrapper stdout END ====
[2024-02-08 17:07:30] 2024-02-08 16:07:30,527 [wrapper] ==== wrapper stderr END ====
[2024-02-08 17:07:30] 2024-02-08 16:07:30,560 [wrapper] apfmon messages muted
[2024-02-08 17:07:30]  *** Error codes and diagnostics ***
[2024-02-08 17:07:30]     "exeErrorCode": 0,
[2024-02-08 17:07:30]     "exeErrorDiag": "",
[2024-02-08 17:07:30]     "pilotErrorCode": 0,
[2024-02-08 17:07:30]     "pilotErrorDiag": "",
[2024-02-08 17:07:30]  *** Listing of results directory ***
[2024-02-08 17:07:30] totale 45788
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc   441289 feb  8 11:27 pilot3.tar.gz
[2024-02-08 17:07:30] -rwx------ 1 boinc boinc    31343 feb  8 11:52 runpilot2-wrapper.sh
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc     4388 feb  8 11:52 queuedata.json
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc      107 feb  8 16:29 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-08 17:07:30] -rwxr-xr-x 1 boinc boinc     7986 feb  8 16:29 run_atlas
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc      112 feb  8 16:29 job.xml
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc     6093 feb  8 16:29 init_data.xml
[2024-02-08 17:07:30] -rw-r--r-- 2 boinc boinc 39611081 feb  8 16:29 EVNT.04972714._000022.pool.root.1
[2024-02-08 17:07:30] -rw-r--r-- 2 boinc boinc    17638 feb  8 16:29 start_atlas.sh
[2024-02-08 17:07:30] drwxrwx--x 2 boinc boinc     4096 feb  8 16:29 shared
[2024-02-08 17:07:30] -rw-r--r-- 2 boinc boinc   453821 feb  8 16:29 input.tar.gz
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc        0 feb  8 16:29 boinc_lockfile
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc     2752 feb  8 16:30 pandaJob.out
[2024-02-08 17:07:30] -rw------- 1 boinc boinc      424 feb  8 16:30 setup.sh.local
[2024-02-08 17:07:30] -rw------- 1 boinc boinc   960249 feb  8 16:31 agis_schedconf.cvmfs.json
[2024-02-08 17:07:30] -rw------- 1 boinc boinc  1342081 feb  8 16:32 cric_ddmendpoints.json
[2024-02-08 17:07:30] drwx------ 4 boinc boinc     4096 feb  8 16:33 pilot3
[2024-02-08 17:07:30] -rw------- 1 boinc boinc  1532447 feb  8 16:59 output.1.e97738a6-603c-49e9-89a3-ae5d9ef236cc_30519.pool.root
[2024-02-08 17:07:30] -rw------- 1 boinc boinc     1003 feb  8 17:00 memory_monitor_summary.json
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc      533 feb  8 17:00 boinc_task_state.xml
[2024-02-08 17:07:30] -rw------- 1 boinc boinc   162692 feb  8 17:03 e97738a6-603c-49e9-89a3-ae5d9ef236cc_30519.1.job.log.tgz
[2024-02-08 17:07:30] -rw------- 1 boinc boinc     7378 feb  8 17:07 heartbeat.json
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc       25 feb  8 17:07 wrapper_checkpoint.txt
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc     8192 feb  8 17:07 boinc_mmap_file
[2024-02-08 17:07:30] -rw------- 1 boinc boinc     4351 feb  8 17:07 pilotlog.txt
[2024-02-08 17:07:30] -rw------- 1 boinc boinc   227523 feb  8 17:07 e97738a6-603c-49e9-89a3-ae5d9ef236cc_30519.1.job.log
[2024-02-08 17:07:30] -rw------- 1 boinc boinc      464 feb  8 17:07 output.list
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc      748 feb  8 17:07 runtime_log
[2024-02-08 17:07:30] -rw------- 1 boinc boinc  1945600 feb  8 17:07 result.tar.gz
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc    11972 feb  8 17:07 runtime_log.err
[2024-02-08 17:07:30] -rw------- 1 boinc boinc      627 feb  8 17:07 cozNDm3BHs4n7Olcko1bjSoqABFKDmABFKDmyeZQDmsbKKDmWZ0rxm.diag
[2024-02-08 17:07:30] -rw-r--r-- 1 boinc boinc    23134 feb  8 17:07 stderr.txt
[2024-02-08 17:07:31] HITS file was successfully produced:
[2024-02-08 17:07:31] -rw------- 1 boinc boinc 1532447 feb  8 16:59 shared/HITS.pool.root.1
[2024-02-08 17:07:31]  *** Contents of shared directory: ***
[2024-02-08 17:07:31] totale 42552
[2024-02-08 17:07:31] -rw-r--r-- 2 boinc boinc 39611081 feb  8 16:29 ATLAS.root_0
[2024-02-08 17:07:31] -rw-r--r-- 2 boinc boinc    17638 feb  8 16:29 start_atlas.sh
[2024-02-08 17:07:31] -rw-r--r-- 2 boinc boinc   453821 feb  8 16:29 input.tar.gz
[2024-02-08 17:07:31] -rw------- 1 boinc boinc  1532447 feb  8 16:59 HITS.pool.root.1
[2024-02-08 17:07:31] -rw------- 1 boinc boinc  1945600 feb  8 17:07 result.tar.gz
17:07:32 (5204): run_atlas exited; CPU time 573.655801
17:07:32 (5204): called boinc_finish(0)

</stderr_txt>
]]>

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