Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
21:18:21 (97609): wrapper (7.7.26015): starting
21:18:21 (97609): wrapper: running run_atlas (--nthreads 1)
[2024-02-08 21:18:21] Arguments: --nthreads 1
[2024-02-08 21:18:21] Threads: 1
[2024-02-08 21:18:21] Checking for CVMFS
[2024-02-08 21:18:21] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-08 21:18:21] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-08 21:18:21] Running cvmfs_config stat atlas.cern.ch
[2024-02-08 21:18:22] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-08 21:18:22] 2.10.1.0 54521 44 41952 129166 3 66 2236164 4096001 86 130560 0 145122 99.987 2083 464 http://s1cern-cvmfs.openhtc.io/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-08 21:18:22] CVMFS is ok
[2024-02-08 21:18:22] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-08 21:18:22] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-08 21:18:22] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-08 21:18:22] Further information can be found at the LHC@home message board.
[2024-02-08 21:18:22] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-08 21:18:22] Checking for apptainer binary...
[2024-02-08 21:18:22] apptainer is not installed, using version from CVMFS
[2024-02-08 21:18:22] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-08 21:18:23] UBMVB2004
[2024-02-08 21:18:23] apptainer works
[2024-02-08 21:18:24] Starting ATLAS job with PandaID=6102815410
[2024-02-08 21:18:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/2 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-08 21:58:36]  *** The last 200 lines of the pilot log: ***
[2024-02-08 21:58:36] 2024-02-08 20:57:33,177 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:35,689 | INFO     | monitor loop #285: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:35,689 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:38,233 | INFO     | monitor loop #286: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:38,233 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:40,744 | INFO     | monitor loop #287: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:40,744 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:41,837 | INFO     | [attempt=2/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-08 21:58:36] 2024-02-08 20:57:41,999 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-08 21:58:36] 2024-02-08 20:57:41,999 | INFO     | will try again after 18s..
[2024-02-08 21:58:36] 2024-02-08 20:57:43,250 | INFO     | monitor loop #288: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:43,250 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:45,754 | INFO     | monitor loop #289: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:45,755 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:48,264 | INFO     | monitor loop #290: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:48,264 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:50,779 | INFO     | monitor loop #291: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:50,780 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:53,291 | INFO     | monitor loop #292: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:53,291 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:55,808 | INFO     | monitor loop #293: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:55,811 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:57:58,323 | INFO     | monitor loop #294: job 0:6102815410 is in state 'stageout'
[2024-02-08 21:58:36] 2024-02-08 20:57:58,324 | WARNING  | aborting job monitor tasks since payload process 113116 is not running
[2024-02-08 21:58:36] 2024-02-08 20:58:00,082 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-08 21:58:36] 2024-02-08 20:58:00,271 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-08 21:58:36] 2024-02-08 20:58:00,272 | WARNING  | cache file=/var/lib/boinc-client/slots/2/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/2/agis
[2024-02-08 21:58:36] 2024-02-08 20:58:00,379 | INFO     | transferring file 43fd9835-2a66-4ff6-9e3e-d35fbc25b655_21215.1.job.log.tgz from /var/lib/boinc-client/slots/2/PanDA_Pilot-6102815410/43fd9835-2a66-4ff6-9e3e-d35fbc
[2024-02-08 21:58:36] 2024-02-08 20:58:00,380 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/2/PanDA_Pilot-6102815410/43fd9835-2a66-4ff6-9e3e-d35fbc25b655_21215.1.job.log.tgz /var/lib/boinc-cli
[2024-02-08 21:58:36] 2024-02-08 20:58:00,438 | INFO     | Adding to output.list: 43fd9835-2a66-4ff6-9e3e-d35fbc25b655_21215.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/48/46/43fd9835-2a66-
[2024-02-08 21:58:36] 2024-02-08 20:58:00,439 | INFO     | summary of transferred files:
[2024-02-08 21:58:36] 2024-02-08 20:58:00,439 | INFO     |  -- lfn=43fd9835-2a66-4ff6-9e3e-d35fbc25b655_21215.1.job.log.tgz, status_code=0, status=transferred
[2024-02-08 21:58:36] 2024-02-08 20:58:00,439 | INFO     | stage-out finished correctly
[2024-02-08 21:58:36] 2024-02-08 20:58:00,884 | INFO     | monitor loop #295: job 0:6102815410 is in state 'finished'
[2024-02-08 21:58:36] 2024-02-08 20:58:00,887 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 21:58:36] 2024-02-08 20:58:02,475 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-08 21:58:36] 2024-02-08 20:58:02,673 | INFO     | job 6102815410 has state=finished
[2024-02-08 21:58:36] 2024-02-08 20:58:02,673 | INFO     | preparing for final server update for job 6102815410 in state='finished'
[2024-02-08 21:58:36] 2024-02-08 20:58:02,674 | INFO     | this job has now completed (state=finished)
[2024-02-08 21:58:36] 2024-02-08 20:58:02,674 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-08 21:58:36] 2024-02-08 20:58:02,674 | INFO     | job 6102815410 has finished - writing final server update
[2024-02-08 21:58:36] 2024-02-08 20:58:02,674 | INFO     | total number of processed events: 2 (read)
[2024-02-08 21:58:36] 2024-02-08 20:58:02,679 | INFO     | executing command: lscpu
[2024-02-08 21:58:36] 2024-02-08 20:58:02,724 | INFO     | found 6 cores (6 cores per socket, 1 sockets)
[2024-02-08 21:58:36] 2024-02-08 20:58:02,724 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-08 21:58:36] 2024-02-08 20:58:02,823 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-08 21:58:36] 2024-02-08 20:58:03,397 | INFO     | monitor loop #296: job 0:6102815410 is in state 'finished'
[2024-02-08 21:58:36] 2024-02-08 20:58:03,398 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 21:58:36] 2024-02-08 20:58:05,907 | INFO     | monitor loop #297: job 0:6102815410 is in state 'finished'
[2024-02-08 21:58:36] 2024-02-08 20:58:05,907 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 21:58:36] 2024-02-08 20:58:08,412 | INFO     | monitor loop #298: job 0:6102815410 is in state 'finished'
[2024-02-08 21:58:36] 2024-02-08 20:58:08,412 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 21:58:36] 2024-02-08 20:58:10,917 | INFO     | monitor loop #299: job 0:6102815410 is in state 'finished'
[2024-02-08 21:58:36] 2024-02-08 20:58:10,917 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 21:58:36] 2024-02-08 20:58:13,421 | INFO     | monitor loop #300: job 0:6102815410 is in state 'finished'
[2024-02-08 21:58:36] 2024-02-08 20:58:13,422 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-08 21:58:36] 2024-02-08 20:58:14,904 | INFO     | CPU arch script returned: x86-64-v2
[2024-02-08 21:58:36] 2024-02-08 20:58:14,904 | INFO     | using path: /var/lib/boinc-client/slots/2/PanDA_Pilot-6102815410/memory_monitor_summary.json (trf name=prmon)
[2024-02-08 21:58:36] 2024-02-08 20:58:14,906 | INFO     | extracted standard info from prmon json
[2024-02-08 21:58:36] 2024-02-08 20:58:14,906 | INFO     | extracted standard memory fields from prmon json
[2024-02-08 21:58:36] 2024-02-08 20:58:14,907 | INFO     | fitting pss+swap vs Time
[2024-02-08 21:58:36] 2024-02-08 20:58:14,907 | INFO     | current memory leak: 538.51 B/s (using 21 data points, chi2=2.26)
[2024-02-08 21:58:36] 2024-02-08 20:58:14,907 | INFO     | ..............................
[2024-02-08 21:58:36] 2024-02-08 20:58:14,907 | INFO     | . Timing measurements:
[2024-02-08 21:58:36] 2024-02-08 20:58:14,907 | INFO     | . get job = 59 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,907 | INFO     | . initial setup = 64 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,907 | INFO     | . payload setup = 30 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,908 | INFO     | . stage-in = 48 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,908 | INFO     | . payload execution = 1693 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,908 | INFO     | . stage-out = 385 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,908 | INFO     | . log creation = 0 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,908 | INFO     | ..............................
[2024-02-08 21:58:36] 2024-02-08 20:58:14,978 | INFO     | 
[2024-02-08 21:58:36] 2024-02-08 20:58:14,978 | INFO     | job summary report
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | --------------------------------------------------
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | PanDA job id: 6102815410
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | task id: NULL
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | errors: (none)
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | pilot state: finished 
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | transexitcode: 0
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | exeerrorcode: 0
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | exeerrordiag: 
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | exitcode: 0
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | exitmsg: OK
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | cpuconsumptiontime: 832 s
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | nevents: 2
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | neventsw: 0
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | pid: 113116
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | pgrp: 113116
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | corecount: 1
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | event service: False
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | sizes: {0: 2405479, 1: 2406851, 2: 2407022, 13: 2407050, 23: 2407106, 34: 2407134, 45: 2407436, 55: 2407464, 66: 2407492, 77: 2407520, 88: 2407576, 92: 2407944, 99
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | --------------------------------------------------
[2024-02-08 21:58:36] 2024-02-08 20:58:14,979 | INFO     | 
[2024-02-08 21:58:36] 2024-02-08 20:58:14,980 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/2
[2024-02-08 21:58:36] 2024-02-08 20:58:15,068 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,068 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,068 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,068 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,068 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | job 6102815410 has completed (purged errors)
[2024-02-08 21:58:36] 2024-02-08 20:58:15,069 | INFO     | overall cleanup function is called
[2024-02-08 21:58:36] 2024-02-08 20:58:16,077 | INFO     | --- collectZombieJob: --- 10, [113116]
[2024-02-08 21:58:36] 2024-02-08 20:58:16,077 | INFO     | zombie collector waiting for pid 113116
[2024-02-08 21:58:36] 2024-02-08 20:58:16,077 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-08 21:58:36] 2024-02-08 20:58:17,083 | INFO     | collected zombie processes
[2024-02-08 21:58:36] 2024-02-08 20:58:17,083 | INFO     | will now attempt to kill all subprocesses of pid=113116
[2024-02-08 21:58:36] 2024-02-08 20:58:17,188 | INFO     | process IDs to be killed: [113116] (in reverse order)
[2024-02-08 21:58:36] 2024-02-08 20:58:17,264 | WARNING  | found no corresponding commands to process id(s)
[2024-02-08 21:58:36] 2024-02-08 20:58:17,264 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-08 21:58:36] 2024-02-08 20:58:17,268 | INFO     | did not find any defunct processes belonging to 113116
[2024-02-08 21:58:36] 2024-02-08 20:58:17,269 | INFO     | did not find any defunct processes belonging to 113116
[2024-02-08 21:58:36] 2024-02-08 20:58:17,270 | INFO     | ready for new job
[2024-02-08 21:58:36] 2024-02-08 20:58:17,270 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-08 21:58:36] 2024-02-08 20:58:17,271 | INFO     | **************************************
[2024-02-08 21:58:36] 2024-02-08 20:58:17,271 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-08 21:58:36] 2024-02-08 20:58:17,271 | INFO     | **************************************
[2024-02-08 21:58:36] 2024-02-08 20:58:17,271 | INFO     | 
[2024-02-08 21:58:36] 2024-02-08 20:58:17,271 | INFO     | pilot is running in a VM
[2024-02-08 21:58:36] 2024-02-08 20:58:17,271 | INFO     | architecture information:
[2024-02-08 21:58:36] 2024-02-08 20:58:17,275 | INFO     | executing command: cat /etc/os-release
[2024-02-08 21:58:36] 2024-02-08 20:58:17,294 | INFO     | cat /etc/os-release:
[2024-02-08 21:58:36] NAME="CentOS Linux"
[2024-02-08 21:58:36] VERSION="7 (Core)"
[2024-02-08 21:58:36] ID="centos"
[2024-02-08 21:58:36] ID_LIKE="rhel fedora"
[2024-02-08 21:58:36] VERSION_ID="7"
[2024-02-08 21:58:36] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-08 21:58:36] ANSI_COLOR="0;31"
[2024-02-08 21:58:36] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-08 21:58:36] HOME_URL="https://www.centos.org/"
[2024-02-08 21:58:36] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-08 21:58:36] 
[2024-02-08 21:58:36] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-08 21:58:36] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-08 21:58:36] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-08 21:58:36] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-08 21:58:36] 
[2024-02-08 21:58:36] 2024-02-08 20:58:17,294 | INFO     | **************************************
[2024-02-08 21:58:36] 2024-02-08 20:58:17,798 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/2
[2024-02-08 21:58:36] 2024-02-08 20:58:17,820 | INFO     | sufficient remaining disk space (52863959040 B)
[2024-02-08 21:58:36] 2024-02-08 20:58:17,820 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-08 21:58:36] 2024-02-08 20:58:17,820 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-08 21:58:36] 2024-02-08 20:58:17,821 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-08 21:58:36] 2024-02-08 20:58:17,821 | INFO     | aborting loop
[2024-02-08 21:58:36] 2024-02-08 20:58:17,821 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-08 21:58:36] 2024-02-08 20:58:17,948 | INFO     | found 0 job(s) in 20 queues
[2024-02-08 21:58:36] 2024-02-08 20:58:17,948 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-08 21:58:36] 2024-02-08 20:58:17,948 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-08 21:58:36] 2024-02-08 20:58:18,617 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-08 21:58:36] 2024-02-08 20:58:18,826 | INFO     | [job] job monitor thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:18,827 | INFO     | [job] retrieve thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:18,833 | INFO     | [job] create_data_payload thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:18,933 | INFO     | [payload] control thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:18,936 | INFO     | [payload] validate_pre thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:19,122 | INFO     | [payload] validate_post thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:19,126 | INFO     | [payload] execute_payloads thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:19,127 | INFO     | [data] copytool_in thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:19,233 | INFO     | [payload] failed_post thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:19,337 | INFO     | [job] validate thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:19,351 | INFO     | [data] control thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:19,645 | INFO     | [job] control thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:20,025 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-08 21:58:36] 2024-02-08 20:58:20,624 | INFO     | [data] copytool_out thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:21,033 | INFO     | [job] queue monitor thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:21,851 | INFO     | [data] queue_monitor thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:27,906 | INFO     | job.realtimelogging is not enabled
[2024-02-08 21:58:36] 2024-02-08 20:58:28,913 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-08 21:58:36] 2024-02-08 20:58:30,420 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 139895718639424)>', '<ExcThread(monitor, started 139894844278528)>']
[2024-02-08 21:58:36] 2024-02-08 20:58:31,042 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-08 21:58:36] 2024-02-08 20:58:31,042 | INFO     | [monitor] control thread has ended
[2024-02-08 21:58:36] 2024-02-08 20:58:35,430 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-08 21:58:36] 2024-02-08 20:58:35,431 | INFO     | traces error code: 0
[2024-02-08 21:58:36] 2024-02-08 20:58:35,431 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-08 21:58:36] 2024-02-08 20:58:35,560 [wrapper] ==== pilot stdout END ====
[2024-02-08 21:58:36] 2024-02-08 20:58:35,585 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-08 21:58:36] 2024-02-08 20:58:35,591 [wrapper] pilotpid: 101201
[2024-02-08 21:58:36] 2024-02-08 20:58:35,596 [wrapper] Pilot exit status: 0
[2024-02-08 21:58:36] 2024-02-08 20:58:35,634 [wrapper] pandaids: 6102815410
[2024-02-08 21:58:36] 2024-02-08 20:58:35,678 [wrapper] cleanup: SIGTERM to supervisor_pilot  133989 101202
[2024-02-08 21:58:36] 2024-02-08 20:58:35,685 [wrapper] Test setup, not cleaning
[2024-02-08 21:58:36] 2024-02-08 20:58:35,699 [wrapper] ==== wrapper stdout END ====
[2024-02-08 21:58:36] 2024-02-08 20:58:35,707 [wrapper] ==== wrapper stderr END ====
[2024-02-08 21:58:36] 2024-02-08 20:58:35,724 [wrapper] apfmon messages muted
[2024-02-08 21:58:36]  *** Error codes and diagnostics ***
[2024-02-08 21:58:36]     "exeErrorCode": 0,
[2024-02-08 21:58:36]     "exeErrorDiag": "",
[2024-02-08 21:58:36]     "pilotErrorCode": 0,
[2024-02-08 21:58:36]     "pilotErrorDiag": "",
[2024-02-08 21:58:36]  *** Listing of results directory ***
[2024-02-08 21:58:36] totale 43668
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc   441289 feb  8 18:50 pilot3.tar.gz
[2024-02-08 21:58:36] -rwx------ 1 boinc boinc    31345 feb  8 19:02 runpilot2-wrapper.sh
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc     4388 feb  8 19:02 queuedata.json
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc      107 feb  8 21:18 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-08 21:58:36] -rwxr-xr-x 1 boinc boinc     7986 feb  8 21:18 run_atlas
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc      112 feb  8 21:18 job.xml
[2024-02-08 21:58:36] -rw-r--r-- 2 boinc boinc    17618 feb  8 21:18 start_atlas.sh
[2024-02-08 21:58:36] drwxrwx--x 2 boinc boinc     4096 feb  8 21:18 shared
[2024-02-08 21:58:36] -rw-r--r-- 2 boinc boinc   453776 feb  8 21:18 input.tar.gz
[2024-02-08 21:58:36] -rw-r--r-- 2 boinc boinc 37960264 feb  8 21:18 EVNT.04972714._000040.pool.root.1
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc        0 feb  8 21:18 boinc_lockfile
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc     2680 feb  8 21:18 pandaJob.out
[2024-02-08 21:58:36] -rw------- 1 boinc boinc      424 feb  8 21:18 setup.sh.local
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc     6094 feb  8 21:18 init_data.xml
[2024-02-08 21:58:36] -rw------- 1 boinc boinc  1341937 feb  8 21:19 cric_ddmendpoints.json
[2024-02-08 21:58:36] -rw------- 1 boinc boinc   956162 feb  8 21:19 agis_schedconf.cvmfs.json
[2024-02-08 21:58:36] drwx------ 4 boinc boinc     4096 feb  8 21:20 pilot3
[2024-02-08 21:58:36] -rw------- 1 boinc boinc  1238567 feb  8 21:51 output.1.43fd9835-2a66-4ff6-9e3e-d35fbc25b655_21215.pool.root
[2024-02-08 21:58:36] -rw------- 1 boinc boinc      998 feb  8 21:51 memory_monitor_summary.json
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc      533 feb  8 21:51 boinc_task_state.xml
[2024-02-08 21:58:36] -rw------- 1 boinc boinc   181156 feb  8 21:55 43fd9835-2a66-4ff6-9e3e-d35fbc25b655_21215.1.job.log.tgz
[2024-02-08 21:58:36] -rw------- 1 boinc boinc     7043 feb  8 21:58 heartbeat.json
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc     8192 feb  8 21:58 boinc_mmap_file
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc       25 feb  8 21:58 wrapper_checkpoint.txt
[2024-02-08 21:58:36] -rw------- 1 boinc boinc     4042 feb  8 21:58 pilotlog.txt
[2024-02-08 21:58:36] -rw------- 1 boinc boinc   246430 feb  8 21:58 43fd9835-2a66-4ff6-9e3e-d35fbc25b655_21215.1.job.log
[2024-02-08 21:58:36] -rw------- 1 boinc boinc      464 feb  8 21:58 output.list
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc      748 feb  8 21:58 runtime_log
[2024-02-08 21:58:36] -rw------- 1 boinc boinc  1689600 feb  8 21:58 result.tar.gz
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc    11966 feb  8 21:58 runtime_log.err
[2024-02-08 21:58:36] -rw------- 1 boinc boinc      627 feb  8 21:58 NYaMDmxtNs4n7Olcko1bjSoqABFKDmABFKDmyeZQDmZcKKDmPArMTm.diag
[2024-02-08 21:58:36] -rw-r--r-- 1 boinc boinc    23220 feb  8 21:58 stderr.txt
[2024-02-08 21:58:36] HITS file was successfully produced:
[2024-02-08 21:58:36] -rw------- 1 boinc boinc 1238567 feb  8 21:51 shared/HITS.pool.root.1
[2024-02-08 21:58:36]  *** Contents of shared directory: ***
[2024-02-08 21:58:36] totale 40400
[2024-02-08 21:58:36] -rw-r--r-- 2 boinc boinc    17618 feb  8 21:18 start_atlas.sh
[2024-02-08 21:58:36] -rw-r--r-- 2 boinc boinc   453776 feb  8 21:18 input.tar.gz
[2024-02-08 21:58:36] -rw-r--r-- 2 boinc boinc 37960264 feb  8 21:18 ATLAS.root_0
[2024-02-08 21:58:36] -rw------- 1 boinc boinc  1238567 feb  8 21:51 HITS.pool.root.1
[2024-02-08 21:58:36] -rw------- 1 boinc boinc  1689600 feb  8 21:58 result.tar.gz
21:58:38 (97609): run_atlas exited; CPU time 252.530690
21:58:38 (97609): called boinc_finish(0)

</stderr_txt>
]]>

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