Stderr output

<core_client_version>7.16.6</core_client_version>
<![CDATA[
<stderr_txt>
00:35:23 (3801571): wrapper (7.7.26015): starting
00:35:23 (3801571): wrapper: running run_atlas (--nthreads 1)
[2024-02-09 00:35:23] Arguments: --nthreads 1
[2024-02-09 00:35:23] Threads: 1
[2024-02-09 00:35:23] Checking for CVMFS
[2024-02-09 00:35:23] Probing /cvmfs/atlas.cern.ch... OK
[2024-02-09 00:35:23] Probing /cvmfs/atlas-condb.cern.ch... OK
[2024-02-09 00:35:23] Running cvmfs_config stat atlas.cern.ch
[2024-02-09 00:35:24] VERSION PID UPTIME(M) MEM(K) REVISION EXPIRES(M) NOCATALOGS CACHEUSE(K) CACHEMAX(K) NOFDUSE NOFDMAX NOIOERR NOOPEN HITRATE(%) RX(K) SPEED(K/S) HOST PROXY ONLINE
[2024-02-09 00:35:24] 2.9.2.0 3797479 0 29144 129180 3 16 3069106 4194304 83 130560 0 8864 99.949 1036 511 http://cvmfs-s1fnal.opensciencegrid.org:8000/cvmfs/atlas.cern.ch DIRECT 1
[2024-02-09 00:35:24] CVMFS is ok
[2024-02-09 00:35:24] Efficiency of ATLAS tasks can be improved by the following measure(s):
[2024-02-09 00:35:24] The CVMFS client on this computer should be configured to use Cloudflare's openhtc.io.
[2024-02-09 00:35:24] Small home clusters do not require a local http proxy but it is suggested if
[2024-02-09 00:35:24] more than 10 cores throughout the same LAN segment are regularly running ATLAS like tasks.
[2024-02-09 00:35:24] Further information can be found at the LHC@home message board.
[2024-02-09 00:35:24] Using apptainer image /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7
[2024-02-09 00:35:24] Checking for apptainer binary...
[2024-02-09 00:35:24] apptainer is not installed, using version from CVMFS
[2024-02-09 00:35:24] Checking apptainer works with /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 hostname
[2024-02-09 00:35:24] WC5950
[2024-02-09 00:35:24] apptainer works
[2024-02-09 00:35:24] Starting ATLAS job with PandaID=6103394455
[2024-02-09 00:35:24] Running command: /cvmfs/atlas.cern.ch/repo/containers/sw/apptainer/x86_64-el7/current/bin/apptainer exec -B /cvmfs,/var/lib/boinc-client/slots/18 /cvmfs/atlas.cern.ch/repo/containers/fs/singularity/x86_64-centos7 sh start_atlas.sh
[2024-02-09 01:00:40]  *** The last 200 lines of the pilot log: ***
[2024-02-09 01:00:40] 2024-02-09 05:59:36,588 | INFO     | will try again after 38s..
[2024-02-09 01:00:40] 2024-02-09 05:59:36,744 | INFO     | 1439s have passed since pilot start
[2024-02-09 01:00:40] 2024-02-09 05:59:38,464 | INFO     | monitor loop #214: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:38,464 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:40,970 | INFO     | monitor loop #215: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:40,970 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:43,472 | INFO     | monitor loop #216: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:43,472 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:45,980 | INFO     | monitor loop #217: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:45,980 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:48,483 | INFO     | monitor loop #218: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:48,483 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:50,984 | INFO     | monitor loop #219: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:50,984 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:53,487 | INFO     | monitor loop #220: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:53,487 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:55,988 | INFO     | monitor loop #221: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:55,988 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 05:59:58,491 | INFO     | monitor loop #222: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 05:59:58,491 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 06:00:00,992 | INFO     | monitor loop #223: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 06:00:00,992 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 06:00:03,495 | INFO     | monitor loop #224: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 06:00:03,495 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 06:00:05,996 | INFO     | monitor loop #225: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 06:00:05,996 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 06:00:08,499 | INFO     | monitor loop #226: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 06:00:08,499 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 06:00:11,004 | INFO     | monitor loop #227: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 06:00:11,004 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 06:00:13,510 | INFO     | monitor loop #228: job 0:6103394455 is in state 'stageout'
[2024-02-09 01:00:40] 2024-02-09 06:00:13,511 | WARNING  | aborting job monitor tasks since payload process 3817644 is not running
[2024-02-09 01:00:40] 2024-02-09 06:00:14,688 | INFO     | [attempt=3/3] loading data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json
[2024-02-09 01:00:40] 2024-02-09 06:00:15,089 | WARNING  | failed to load data from url=https://atlas-cric.cern.ch/cache/ddmendpoints.json, error: <urlopen error [SSL: CERTIFICATE_VERIFY_FAILED] certificate verify failed: 
[2024-02-09 01:00:40] 2024-02-09 06:00:15,089 | WARNING  | cache file=/var/lib/boinc-client/slots/18/agis_ddmendpoints.agis.ALL.json is not available: [Errno 2] No such file or directory: '/var/lib/boinc-client/slots/18/ag
[2024-02-09 01:00:40] 2024-02-09 06:00:15,122 | INFO     | transferring file 14c88d0d-49d1-4f4c-ab70-a2e8f503af90_94067.1.job.log.tgz from /var/lib/boinc-client/slots/18/PanDA_Pilot-6103394455/14c88d0d-49d1-4f4c-ab70-a2e8f
[2024-02-09 01:00:40] 2024-02-09 06:00:15,122 | INFO     | executing command: /usr/bin/env mv /var/lib/boinc-client/slots/18/PanDA_Pilot-6103394455/14c88d0d-49d1-4f4c-ab70-a2e8f503af90_94067.1.job.log.tgz /var/lib/boinc-cl
[2024-02-09 01:00:40] 2024-02-09 06:00:15,142 | INFO     | Adding to output.list: 14c88d0d-49d1-4f4c-ab70-a2e8f503af90_94067.1.job.log.tgz davs://dav.ndgf.org:443/atlas/disk/atlasdatadisk/rucio/hc_test/7d/ba/14c88d0d-49d1-
[2024-02-09 01:00:40] 2024-02-09 06:00:15,142 | INFO     | summary of transferred files:
[2024-02-09 01:00:40] 2024-02-09 06:00:15,142 | INFO     |  -- lfn=14c88d0d-49d1-4f4c-ab70-a2e8f503af90_94067.1.job.log.tgz, status_code=0, status=transferred
[2024-02-09 01:00:40] 2024-02-09 06:00:15,142 | INFO     | stage-out finished correctly
[2024-02-09 01:00:40] 2024-02-09 06:00:16,012 | INFO     | monitor loop #229: job 0:6103394455 is in state 'finished'
[2024-02-09 01:00:40] 2024-02-09 06:00:16,012 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-09 01:00:40] 2024-02-09 06:00:16,539 | INFO     | finished stage-out for finished payload, adding job to finished_jobs queue
[2024-02-09 01:00:40] 2024-02-09 06:00:16,593 | INFO     | job 6103394455 has state=finished
[2024-02-09 01:00:40] 2024-02-09 06:00:16,593 | INFO     | preparing for final server update for job 6103394455 in state='finished'
[2024-02-09 01:00:40] 2024-02-09 06:00:16,593 | INFO     | this job has now completed (state=finished)
[2024-02-09 01:00:40] 2024-02-09 06:00:16,593 | INFO     | pilot will not update the server (heartbeat message will be written to file)
[2024-02-09 01:00:40] 2024-02-09 06:00:16,593 | INFO     | job 6103394455 has finished - writing final server update
[2024-02-09 01:00:40] 2024-02-09 06:00:16,593 | INFO     | total number of processed events: 2 (read)
[2024-02-09 01:00:40] 2024-02-09 06:00:16,613 | INFO     | executing command: lscpu
[2024-02-09 01:00:40] 2024-02-09 06:00:16,631 | INFO     | found 16 cores (16 cores per socket, 1 sockets)
[2024-02-09 01:00:40] 2024-02-09 06:00:16,631 | INFO     | executing command: grep -o 'avx2[^ ]*\|AVX2[^ ]*' /proc/cpuinfo
[2024-02-09 01:00:40] 2024-02-09 06:00:16,662 | INFO     | executing command: export ATLAS_LOCAL_ROOT_BASE=/cvmfs/atlas.cern.ch/repo/ATLASLocalRootBase;source ${ATLAS_LOCAL_ROOT_BASE}/user/atlasLocalSetup.sh --quiet;lsetup
[2024-02-09 01:00:40] 2024-02-09 06:00:18,516 | INFO     | monitor loop #230: job 0:6103394455 is in state 'finished'
[2024-02-09 01:00:40] 2024-02-09 06:00:18,516 | INFO     | will abort job monitoring soon since job state=finished (job is still in queue)
[2024-02-09 01:00:40] 2024-02-09 06:00:20,005 | INFO     | CPU arch script returned: x86-64-v3
[2024-02-09 01:00:40] 2024-02-09 06:00:20,005 | INFO     | using path: /var/lib/boinc-client/slots/18/PanDA_Pilot-6103394455/memory_monitor_summary.json (trf name=prmon)
[2024-02-09 01:00:40] 2024-02-09 06:00:20,006 | INFO     | extracted standard info from prmon json
[2024-02-09 01:00:40] 2024-02-09 06:00:20,006 | INFO     | extracted standard memory fields from prmon json
[2024-02-09 01:00:40] 2024-02-09 06:00:20,006 | INFO     | fitting pss+swap vs Time
[2024-02-09 01:00:40] 2024-02-09 06:00:20,006 | INFO     | current memory leak: 2166.18 B/s (using 8 data points, chi2=0.08)
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | ..............................
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . Timing measurements:
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . get job = 56 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . initial setup = 85 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . payload setup = 7 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . stage-in = 45 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . payload execution = 887 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . stage-out = 381 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | . log creation = 0 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,007 | INFO     | ..............................
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | 
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | job summary report
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | --------------------------------------------------
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | PanDA job id: 6103394455
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | task id: NULL
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | errors: (none)
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | status: LOG_TRANSFER = DONE 
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | pilot state: finished 
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | transexitcode: 0
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | exeerrorcode: 0
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | exeerrordiag: 
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | exitcode: 0
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | exitmsg: OK
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | cpuconsumptiontime: 461 s
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | nevents: 2
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | neventsw: 0
[2024-02-09 01:00:40] 2024-02-09 06:00:20,064 | INFO     | pid: 3817644
[2024-02-09 01:00:40] 2024-02-09 06:00:20,065 | INFO     | pgrp: 3817644
[2024-02-09 01:00:40] 2024-02-09 06:00:20,065 | INFO     | corecount: 1
[2024-02-09 01:00:40] 2024-02-09 06:00:20,065 | INFO     | event service: False
[2024-02-09 01:00:40] 2024-02-09 06:00:20,065 | INFO     | sizes: {0: 2407166, 11: 2407312, 22: 2407340, 32: 2407368, 43: 2407396, 49: 2407484, 53: 2407640, 898: 2427187, 1280: 2436253, 1281: 2436309, 1285: 2436531}
[2024-02-09 01:00:40] 2024-02-09 06:00:20,065 | INFO     | --------------------------------------------------
[2024-02-09 01:00:40] 2024-02-09 06:00:20,065 | INFO     | 
[2024-02-09 01:00:40] 2024-02-09 06:00:20,065 | INFO     | executing command: ls -lF /var/lib/boinc-client/slots/18
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue jobs had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue payloads had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue data_in had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue data_out had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue current_data_in had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue validated_jobs had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue validated_payloads had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue monitored_payloads had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue finished_jobs had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue finished_payloads had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue finished_data_in had 1 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue finished_data_out had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue failed_jobs had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue failed_payloads had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue failed_data_in had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue failed_data_out had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue completed_jobs had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,079 | INFO     | queue completed_jobids has 1 job(s)
[2024-02-09 01:00:40] 2024-02-09 06:00:20,080 | INFO     | queue realtimelog_payloads had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,080 | INFO     | queue messages had 0 job(s) [purged]
[2024-02-09 01:00:40] 2024-02-09 06:00:20,080 | INFO     | job 6103394455 has completed (purged errors)
[2024-02-09 01:00:40] 2024-02-09 06:00:20,080 | INFO     | overall cleanup function is called
[2024-02-09 01:00:40] 2024-02-09 06:00:21,084 | INFO     | --- collectZombieJob: --- 10, [3817644]
[2024-02-09 01:00:40] 2024-02-09 06:00:21,084 | INFO     | zombie collector waiting for pid 3817644
[2024-02-09 01:00:40] 2024-02-09 06:00:21,084 | INFO     | harmless exception when collecting zombies: [Errno 10] No child processes
[2024-02-09 01:00:40] 2024-02-09 06:00:22,088 | INFO     | collected zombie processes
[2024-02-09 01:00:40] 2024-02-09 06:00:22,088 | INFO     | will now attempt to kill all subprocesses of pid=3817644
[2024-02-09 01:00:40] 2024-02-09 06:00:22,153 | INFO     | process IDs to be killed: [3817644] (in reverse order)
[2024-02-09 01:00:40] 2024-02-09 06:00:22,200 | WARNING  | found no corresponding commands to process id(s)
[2024-02-09 01:00:40] 2024-02-09 06:00:22,200 | INFO     | Do not look for orphan processes in BOINC jobs
[2024-02-09 01:00:40] 2024-02-09 06:00:22,203 | INFO     | did not find any defunct processes belonging to 3817644
[2024-02-09 01:00:40] 2024-02-09 06:00:22,205 | INFO     | did not find any defunct processes belonging to 3817644
[2024-02-09 01:00:40] 2024-02-09 06:00:22,205 | INFO     | ready for new job
[2024-02-09 01:00:40] 2024-02-09 06:00:22,205 | INFO     | pilot has finished with previous job - re-establishing logging
[2024-02-09 01:00:40] 2024-02-09 06:00:22,206 | INFO     | **************************************
[2024-02-09 01:00:40] 2024-02-09 06:00:22,206 | INFO     | ***  PanDA Pilot version 3.7.0.36  ***
[2024-02-09 01:00:40] 2024-02-09 06:00:22,206 | INFO     | **************************************
[2024-02-09 01:00:40] 2024-02-09 06:00:22,206 | INFO     | 
[2024-02-09 01:00:40] 2024-02-09 06:00:22,225 | INFO     | architecture information:
[2024-02-09 01:00:40] 2024-02-09 06:00:22,232 | INFO     | executing command: cat /etc/os-release
[2024-02-09 01:00:40] 2024-02-09 06:00:22,241 | INFO     | cat /etc/os-release:
[2024-02-09 01:00:40] NAME="CentOS Linux"
[2024-02-09 01:00:40] VERSION="7 (Core)"
[2024-02-09 01:00:40] ID="centos"
[2024-02-09 01:00:40] ID_LIKE="rhel fedora"
[2024-02-09 01:00:40] VERSION_ID="7"
[2024-02-09 01:00:40] PRETTY_NAME="CentOS Linux 7 (Core)"
[2024-02-09 01:00:40] ANSI_COLOR="0;31"
[2024-02-09 01:00:40] CPE_NAME="cpe:/o:centos:centos:7"
[2024-02-09 01:00:40] HOME_URL="https://www.centos.org/"
[2024-02-09 01:00:40] BUG_REPORT_URL="https://bugs.centos.org/"
[2024-02-09 01:00:40] 
[2024-02-09 01:00:40] CENTOS_MANTISBT_PROJECT="CentOS-7"
[2024-02-09 01:00:40] CENTOS_MANTISBT_PROJECT_VERSION="7"
[2024-02-09 01:00:40] REDHAT_SUPPORT_PRODUCT="centos"
[2024-02-09 01:00:40] REDHAT_SUPPORT_PRODUCT_VERSION="7"
[2024-02-09 01:00:40] 
[2024-02-09 01:00:40] 2024-02-09 06:00:22,241 | INFO     | **************************************
[2024-02-09 01:00:40] 2024-02-09 06:00:22,743 | INFO     | executing command: df -mP /var/lib/boinc-client/slots/18
[2024-02-09 01:00:40] 2024-02-09 06:00:22,758 | INFO     | sufficient remaining disk space (368323854336 B)
[2024-02-09 01:00:40] 2024-02-09 06:00:22,758 | WARNING  | since timefloor is set to 0, pilot was only allowed to run one job
[2024-02-09 01:00:40] 2024-02-09 06:00:22,758 | WARNING  | setting graceful_stop since proceed_with_getjob() returned False (pilot will end)
[2024-02-09 01:00:40] 2024-02-09 06:00:22,758 | WARNING  | aborting monitor loop since graceful_stop has been set (timing out remaining threads)
[2024-02-09 01:00:40] 2024-02-09 06:00:22,758 | WARNING  | data:queue_monitoring:received graceful stop - abort after this iteration
[2024-02-09 01:00:40] 2024-02-09 06:00:22,759 | INFO     | found 0 job(s) in 20 queues
[2024-02-09 01:00:40] 2024-02-09 06:00:22,759 | WARNING  | pilot monitor received instruction that args.graceful_stop has been set
[2024-02-09 01:00:40] 2024-02-09 06:00:22,759 | WARNING  | will wait for a maximum of 300 s for threads to finish
[2024-02-09 01:00:40] 2024-02-09 06:00:22,760 | WARNING  | job:job_monitor:received graceful stop - abort after this iteration
[2024-02-09 01:00:40] 2024-02-09 06:00:22,760 | INFO     | aborting loop
[2024-02-09 01:00:40] 2024-02-09 06:00:23,207 | WARNING  | data:copytool_out:received graceful stop - abort after this iteration
[2024-02-09 01:00:40] 2024-02-09 06:00:23,760 | INFO     | [job] retrieve thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:23,768 | INFO     | [job] job monitor thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:23,869 | INFO     | [payload] validate_pre thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:24,132 | INFO     | [job] create_data_payload thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:24,216 | INFO     | [data] control thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:24,236 | INFO     | [payload] validate_post thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:24,796 | INFO     | [job] control thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:24,940 | INFO     | [payload] execute_payloads thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:25,072 | WARNING  | job:queue_monitor:received graceful stop - abort after this iteration
[2024-02-09 01:00:40] 2024-02-09 06:00:25,104 | INFO     | [payload] control thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:25,152 | INFO     | [data] copytool_in thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:25,156 | INFO     | [job] validate thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:25,208 | INFO     | [data] copytool_out thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:25,220 | INFO     | [payload] failed_post thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:26,076 | INFO     | [job] queue monitor thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:26,764 | INFO     | [data] queue_monitor thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:33,376 | INFO     | job.realtimelogging is not enabled
[2024-02-09 01:00:40] 2024-02-09 06:00:34,380 | INFO     | [payload] run_realtimelog thread has finished
[2024-02-09 01:00:40] 2024-02-09 06:00:35,516 | INFO     | only monitor.control thread still running - safe to abort: ['<_MainThread(MainThread, started 140386960496448)>', '<ExcThread(monitor, started 140386668357376)>']
[2024-02-09 01:00:40] 2024-02-09 06:00:35,816 | WARNING  | job_aborted has been set - aborting pilot monitoring
[2024-02-09 01:00:40] 2024-02-09 06:00:35,816 | INFO     | [monitor] control thread has ended
[2024-02-09 01:00:40] 2024-02-09 06:00:40,540 | INFO     | end of generic workflow (traces error code: 0)
[2024-02-09 01:00:40] 2024-02-09 06:00:40,540 | INFO     | traces error code: 0
[2024-02-09 01:00:40] 2024-02-09 06:00:40,540 | INFO     | pilot has finished (exit code=0, shell exit code=0)
[2024-02-09 01:00:40] 2024-02-09 06:00:40,586 [wrapper] ==== pilot stdout END ====
[2024-02-09 01:00:40] 2024-02-09 06:00:40,601 [wrapper] ==== wrapper stdout RESUME ====
[2024-02-09 01:00:40] 2024-02-09 06:00:40,606 [wrapper] pilotpid: 3805297
[2024-02-09 01:00:40] 2024-02-09 06:00:40,614 [wrapper] Pilot exit status: 0
[2024-02-09 01:00:40] 2024-02-09 06:00:40,641 [wrapper] pandaids: 6103394455
[2024-02-09 01:00:40] 2024-02-09 06:00:40,677 [wrapper] cleanup: SIGTERM to supervisor_pilot 3870998 3805298
[2024-02-09 01:00:40] 2024-02-09 06:00:40,686 [wrapper] Test setup, not cleaning
[2024-02-09 01:00:40] 2024-02-09 06:00:40,694 [wrapper] ==== wrapper stdout END ====
[2024-02-09 01:00:40] 2024-02-09 06:00:40,702 [wrapper] ==== wrapper stderr END ====
[2024-02-09 01:00:40] 2024-02-09 06:00:40,725 [wrapper] apfmon messages muted
[2024-02-09 01:00:40]  *** Error codes and diagnostics ***
[2024-02-09 01:00:40]     "exeErrorCode": 0,
[2024-02-09 01:00:40]     "exeErrorDiag": "",
[2024-02-09 01:00:40]     "pilotErrorCode": 0,
[2024-02-09 01:00:40]     "pilotErrorDiag": "",
[2024-02-09 01:00:40]  *** Listing of results directory ***
[2024-02-09 01:00:40] total 44220
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc   441289 Feb  8 23:38 pilot3.tar.gz
[2024-02-09 01:00:40] -rwx------ 1 boinc boinc    31345 Feb  9 00:03 runpilot2-wrapper.sh
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc     4388 Feb  9 00:03 queuedata.json
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc      107 Feb  9 00:35 wrapper_26015_x86_64-pc-linux-gnu
[2024-02-09 01:00:40] -rwxr-xr-x 1 boinc boinc     7986 Feb  9 00:35 run_atlas
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc      112 Feb  9 00:35 job.xml
[2024-02-09 01:00:40] -rw-r--r-- 2 boinc boinc    17618 Feb  9 00:35 start_atlas.sh
[2024-02-09 01:00:40] drwxrwx--x 2 boinc boinc     4096 Feb  9 00:35 shared
[2024-02-09 01:00:40] -rw-r--r-- 2 boinc boinc   453818 Feb  9 00:35 input.tar.gz
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc     9513 Feb  9 00:35 init_data.xml
[2024-02-09 01:00:40] -rw-r--r-- 2 boinc boinc 38184411 Feb  9 00:35 EVNT.04972714._000028.pool.root.1
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc        0 Feb  9 00:35 boinc_lockfile
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc     2753 Feb  9 00:35 pandaJob.out
[2024-02-09 01:00:40] -rw------- 1 boinc boinc      424 Feb  9 00:35 setup.sh.local
[2024-02-09 01:00:40] -rw------- 1 boinc boinc  1341937 Feb  9 00:37 cric_ddmendpoints.json
[2024-02-09 01:00:40] -rw------- 1 boinc boinc   956162 Feb  9 00:37 agis_schedconf.cvmfs.json
[2024-02-09 01:00:40] drwx------ 4 boinc boinc     4096 Feb  9 00:37 pilot3
[2024-02-09 01:00:40] -rw------- 1 boinc boinc  1495937 Feb  9 00:53 output.1.14c88d0d-49d1-4f4c-ab70-a2e8f503af90_94067.pool.root
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc      533 Feb  9 00:53 boinc_task_state.xml
[2024-02-09 01:00:40] -rw------- 1 boinc boinc     1002 Feb  9 00:53 memory_monitor_summary.json
[2024-02-09 01:00:40] -rw------- 1 boinc boinc   156664 Feb  9 00:57 14c88d0d-49d1-4f4c-ab70-a2e8f503af90_94067.1.job.log.tgz
[2024-02-09 01:00:40] -rw------- 1 boinc boinc     6587 Feb  9 01:00 heartbeat.json
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc       25 Feb  9 01:00 wrapper_checkpoint.txt
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc     8192 Feb  9 01:00 boinc_mmap_file
[2024-02-09 01:00:40] -rw------- 1 boinc boinc     4105 Feb  9 01:00 pilotlog.txt
[2024-02-09 01:00:40] -rw------- 1 boinc boinc   182407 Feb  9 01:00 14c88d0d-49d1-4f4c-ab70-a2e8f503af90_94067.1.job.log
[2024-02-09 01:00:40] -rw------- 1 boinc boinc      464 Feb  9 01:00 output.list
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc      748 Feb  9 01:00 runtime_log
[2024-02-09 01:00:40] -rw------- 1 boinc boinc  1853440 Feb  9 01:00 result.tar.gz
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc    11968 Feb  9 01:00 runtime_log.err
[2024-02-09 01:00:40] -rw------- 1 boinc boinc      625 Feb  9 01:00 QfVMDmxDYs4n7Olcko1bjSoqABFKDmABFKDmyeZQDm5cKKDmTNmcmn.diag
[2024-02-09 01:00:40] -rw-r--r-- 1 boinc boinc    23234 Feb  9 01:00 stderr.txt
[2024-02-09 01:00:40] HITS file was successfully produced:
[2024-02-09 01:00:40] -rw------- 1 boinc boinc 1495937 Feb  9 00:53 shared/HITS.pool.root.1
[2024-02-09 01:00:40]  *** Contents of shared directory: ***
[2024-02-09 01:00:40] total 41032
[2024-02-09 01:00:40] -rw-r--r-- 2 boinc boinc    17618 Feb  9 00:35 start_atlas.sh
[2024-02-09 01:00:40] -rw-r--r-- 2 boinc boinc   453818 Feb  9 00:35 input.tar.gz
[2024-02-09 01:00:40] -rw-r--r-- 2 boinc boinc 38184411 Feb  9 00:35 ATLAS.root_0
[2024-02-09 01:00:40] -rw------- 1 boinc boinc  1495937 Feb  9 00:53 HITS.pool.root.1
[2024-02-09 01:00:40] -rw------- 1 boinc boinc  1853440 Feb  9 01:00 result.tar.gz
01:00:42 (3801571): run_atlas exited; CPU time 457.252736
01:00:42 (3801571): called boinc_finish(0)

</stderr_txt>
]]>

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